SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000130487
Gene: KLHDC7B Gene type: protein_coding
Strand: + External links:
Genomic region: chr22:50545899-50551023 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_013200163 chr22:50523160-50564273 Sample_02_0132 Lung 1015_CL 163 5 1314 229 19 163 3223 ODF3B,KLHDC7B,SCO2,TYMP,C22ORF41,NCAPH2,LOC100144603,CPT1B,LMF2,SBF1,MAPK8IP2,ADM2,MIOX,CHKB
SE_00_000700457 chr22:50524107-50564075 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 457 6 1267 224 17 145 3041 ODF3B,KLHDC7B,SCO2,TYMP,C22ORF41,NCAPH2,LOC100144603,CPT1B,LMF2,SBF1,MAPK8IP2,ADM2,MIOX,CHKB
SE_02_002200427 chr22:50524626-50563503 Sample_02_0022 Blood CD8donorA 427 10 1244 221 16 144 2924 ODF3B,KLHDC7B,SCO2,TYMP,C22ORF41,NCAPH2,LOC100144603,CPT1B,LMF2,SBF1,MAPK8IP2,ADM2,MIOX,CHKB
SE_00_002700189 chr22:50524702-50562235 Sample_00_0027 Blood natural-killer-cell 189 6 1206 214 16 142 2797 ODF3B,KLHDC7B,SCO2,TYMP,C22ORF41,NCAPH2,LOC100144603,CPT1B,LMF2,SBF1,MAPK8IP2,ADM2,MIOX,CHKB
SE_02_061500135 chr22:50533478-50548996 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 135 3 500 84 4 24 347 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,MIOX,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_104601658 chr22:50535184-50551561 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1658 11 521 88 8 54 884 SYCE3,KLHDC7B,CHKB-AS1,ODF3B,SCO2,MIOX,CPT1B,CHKB,MAPK8IP2,LMF2,NCAPH2,TYMP
SE_02_092700110 chr22:50536042-50545523 Sample_02_0927 Peripheral blood neutrophils_US 110 1 308 52 4 1 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,MIOX,CPT1B,CHKB,LMF2,NCAPH2,TYMP,ARSA,SBF1
SE_02_092800161 chr22:50536102-50546811 Sample_02_0928 Peripheral blood neutrophils_Ecoli 161 1 338 60 4 10 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,MIOX,CPT1B,CHKB,LMF2,NCAPH2,TYMP,ARSA,SBF1
SE_02_135000255 chr22:50536114-50544654 Sample_02_1350 Leukophereses leukophereses_p456 255 1 285 47 4 0 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,MIOX,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_01_008501340 chr22:50536190-50545745 Sample_01_0085 Stomach stomach 1340 1 307 54 4 1 0 ODF3B,C22ORF41,SCO2,NCAPH2,CPT1B,LMF2,LOC100144603,MIOX,TYMP,KLHDC7B,CHKB
SE_02_020600073 chr22:50536453-50544955 Sample_02_0206 Stomach Gastric_Primary_Sample_N 73 5 277 47 4 1 0 ODF3B,C22ORF41,SCO2,NCAPH2,CPT1B,LMF2,LOC100144603,MIOX,TYMP,KLHDC7B,CHKB
SE_02_081600608 chr22:50536636-50545395 Sample_02_0816 Ovary Clear cell ovarian cancer 608 1 285 49 4 1 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,MIOX,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_01_005200151 chr22:50536691-50545677 Sample_01_0052 Blood neutrophil 151 1 294 53 4 1 0 ODF3B,C22ORF41,SCO2,NCAPH2,CPT1B,LMF2,LOC100144603,MIOX,TYMP,KLHDC7B,CHKB
SE_02_119500641 chr22:50536695-50549557 Sample_02_1195 Brain GBM29 641 1 398 69 4 39 494 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,MIOX,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_128000589 chr22:50536724-50549526 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 589 1 396 69 4 36 487 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,MIOX,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_103000078 chr22:50536874-50550582 Sample_02_1030 Colon DKO 78 1 431 69 6 50 723 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_050200152 chr22:50536918-50547860 Sample_02_0502 Blood HL-60_PMA_16h 152 1 344 61 4 13 3 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_057500633 chr22:50537054-50545277 Sample_02_0575 Blood MOLM13_sgLKB1e2 633 1 270 46 4 1 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_005300212 chr22:50537211-50548556 Sample_02_0053 Colon DKO1 212 1 350 62 4 17 222 KLHDC7B,ODF3B,C22ORF41,SCO2,NCAPH2,CPT1B,LMF2,LOC100144603,TYMP,CHKB
SE_02_104801258 chr22:50537362-50550065 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1258 7 402 65 6 50 624 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_122400893 chr22:50537387-50543414 Sample_02_1224 Bone marrow normal plasma cell 893 1 204 35 4 0 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_071500581 chr22:50537933-50544307 Sample_02_0715 Pancreas SUIT2_TP63dN 581 5 214 36 4 0 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP,ARSA,ADM2,SBF1,MAPK8IP2
SE_02_150900454 chr22:50537971-50544843 Sample_02_1509 Lung H3122_LR 454 5 227 36 4 1 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_123100595 chr22:50538001-50546549 Sample_02_1231 Lung PC9_siMED13L-1 595 5 269 47 4 7 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_104301517 chr22:50538229-50550655 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1517 8 384 62 6 50 743 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_058800453 chr22:50538237-50546629 Sample_02_0588 Cervix HeLa Kyoto_untreated 453 6 258 48 4 7 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_080700083 chr22:50538406-50542250 Sample_02_0807 Pancreatic duct pancreatic epithelial cells_ARID1A_KO 83 6 105 19 2 0 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_072500270 chr22:50538543-50545915 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 270 8 234 41 3 2 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_123200486 chr22:50538545-50546578 Sample_02_1232 Lung PC9_siMED13L-2 486 8 251 45 3 7 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_065400058 chr22:50538591-50544818 Sample_02_0654 Tracheobronchial epithelial HTBE_H5N1_06h 58 5 206 34 3 0 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_065500036 chr22:50538732-50544706 Sample_02_0655 Tracheobronchial epithelial HTBE_H5N1_12h 36 4 196 33 3 0 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_000600217 chr22:50539071-50542342 Sample_02_0006 Cervical cervical-cancer_parental 217 2 80 16 2 0 0 ODF3B,C22ORF41,SCO2,NCAPH2,CPT1B,LMF2,LOC100144603,TYMP,KLHDC7B,CHKB
SE_02_047000025 chr22:50539152-50541817 Sample_02_0470 Blood GM12878 25 2 65 14 2 0 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP,ARSA,RABL2B,ADM2,SBF1,MAPK8IP2,MIOX,SHANK3
SE_02_057200896 chr22:50539155-50546626 Sample_02_0572 Brain LN229_1_mM_glucose 896 6 227 42 3 7 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_157300589 chr22:50539805-50547709 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 589 1 243 46 2 13 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_093001244 chr22:50539905-50543392 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1244 1 117 20 1 0 0 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_103600240 chr22:50545067-50549968 Sample_02_1036 Mammary gland HCC70_XY018 240 1 143 24 2 49 599 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
SE_02_103500359 chr22:50545083-50549877 Sample_02_1035 Mammary gland HCC70_Vehicle 359 1 138 24 2 49 574 KLHDC7B,CHKB-AS1,SYCE3,ODF3B,SCO2,CPT1B,CHKB,LMF2,NCAPH2,TYMP
Genomic distribution of SEs associated with KLHDC7B
Genome Browser

The strength of the tissue affected by the gene

Expression of KLHDC7B

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)