Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000130294 |
| Gene: | KIF1A | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr2:240713761-240824293 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_101700294 | chr2:240687812-240821602 |
Sample_02_1017 | Embryo | H9_Mesendoderm 24h_Hydroxyurea | 294 | 29 | 4194 | 286 | 5 | 380 | 7811 | KIF1A,AQP12A,AGXT,AQP12B |
| SE_02_110600338 | chr2:240699497-240796052 |
Sample_02_1106 | Brain | NGP | 338 | 66 | 3200 | 178 | 4 | 272 | 6398 | KIF1A,AQP12A,AQP12B |
| SE_02_143301032 | chr2:240712197-240795802 |
Sample_02_1433 | Bone | A673 STAG2 null | 1032 | 51 | 2812 | 157 | 3 | 272 | 6398 | KIF1A,AQP12A,AQP12B |
| SE_02_143201370 | chr2:240713181-240794122 |
Sample_02_1432 | Bone | A673 STAG2 WT | 1370 | 35 | 2719 | 150 | 3 | 272 | 6398 | KIF1A,AQP12A,AQP12B |
| SE_02_124400164 | chr2:240713946-240795697 |
Sample_02_1244 | Brain | KCNR_ATRA | 164 | 36 | 2736 | 154 | 3 | 266 | 6328 | KIF1A,AQP12A,AQP12B |
| SE_02_062800111 | chr2:240714786-240794656 |
Sample_02_0628 | Brain | CHP-134 | 111 | 35 | 2676 | 150 | 3 | 264 | 6132 | KIF1A,AQP12A,AQP12B |
| SE_02_055200110 | chr2:240715077-240795657 |
Sample_02_0552 | Other | SYO1 shCt | 110 | 41 | 2700 | 152 | 3 | 263 | 6067 | KIF1A,AQP12A,AQP12B |
| SE_02_087300047 | chr2:240717212-240785358 |
Sample_02_0873 | Colon | HCT116_siGLIS2.1-5FU | 47 | 18 | 2292 | 124 | 2 | 224 | 5095 | KIF1A,AQP12A,AQP12B |
| SE_02_087400031 | chr2:240719578-240794505 |
Sample_02_0874 | Colon | HCT116_siGLIS2.2-5FU | 31 | 22 | 2501 | 145 | 3 | 229 | 5249 | KIF1A,AQP12A,AQP12B |
| SE_02_087100031 | chr2:240727225-240763364 |
Sample_02_0871 | Colon | HCT116_GLIS2.2-DMSO | 31 | 9 | 1173 | 68 | 1 | 108 | 1892 | KIF1A,AQP12A,AQP12B |
| SE_02_021600900 | chr2:240751475-240775464 |
Sample_02_0216 | Skin | NHEK_scramble | 900 | 6 | 724 | 51 | 1 | 74 | 1674 | KIF1A |
| SE_02_108300236 | chr2:240754350-240851953 |
Sample_02_1083 | Macula | macula | 236 | 24 | 3053 | 280 | 6 | 215 | 3073 | KIF1A,AGXT,C2ORF54 |
| SE_02_120500479 | chr2:240754738-240836803 |
Sample_02_1205 | Brain | NB3 | 479 | 31 | 2521 | 222 | 5 | 213 | 3073 | KIF1A,AGXT |
| SE_02_117300977 | chr2:240754754-240800508 |
Sample_02_1173 | Brain | GBM01 | 977 | 22 | 1484 | 93 | 2 | 133 | 2908 | KIF1A |
| SE_02_087200237 | chr2:240760161-240791985 |
Sample_02_0872 | Colon | HCT116_siCtrl-5FU | 237 | 7 | 1063 | 63 | 2 | 125 | 2530 | KIF1A |
| SE_02_120301140 | chr2:240761062-240800845 |
Sample_02_1203 | Brain | NB1 | 1140 | 14 | 1310 | 82 | 2 | 122 | 2505 | KIF1A |
| SE_02_104701485 | chr2:240780546-240851837 |
Sample_02_1047 | Peripheral blood | CD4+ cells_CTCL1181 | 1485 | 17 | 2219 | 231 | 5 | 131 | 1283 | KIF1A,AGXT,C2ORF54 |
| SE_02_000600113 | chr2:240780756-240781497 |
Sample_02_0006 | Cervical | cervical-cancer_parental | 113 | 2 | 7 | 0 | 0 | 0 | 0 | KIF1A,CAPN10 |
| SE_02_087100233 | chr2:240781112-240792321 |
Sample_02_0871 | Colon | HCT116_GLIS2.2-DMSO | 233 | 3 | 395 | 28 | 1 | 41 | 1007 | KIF1A |
| SE_02_108200342 | chr2:240810313-240840732 |
Sample_02_1082 | Retina | retina | 342 | 7 | 913 | 96 | 4 | 82 | 165 | KIF1A,AGXT |
| SE_02_027700316 | chr2:240814803-240834028 |
Sample_02_0277 | Retina | FW18 | 316 | 2 | 521 | 63 | 3 | 80 | 165 | KIF1A,AGXT |
| SE_02_027800270 | chr2:240814815-240833468 |
Sample_02_0278 | Retina | FW24 | 270 | 2 | 504 | 58 | 3 | 80 | 165 | KIF1A,AGXT |
| SE_02_104601479 | chr2:240815018-240856920 |
Sample_02_1046 | Peripheral blood | CD4+ cells_CTCL1145 | 1479 | 20 | 1320 | 146 | 6 | 82 | 165 | KIF1A,AGXT,C2ORF54 |
| SE_02_117300598 | chr2:240815122-240840809 |
Sample_02_1173 | Brain | GBM01 | 598 | 7 | 746 | 77 | 4 | 82 | 165 | KIF1A,AGXT |
| SE_02_027500250 | chr2:240815791-240852906 |
Sample_02_0275 | Retina | FW14 | 250 | 4 | 1138 | 128 | 4 | 80 | 165 | KIF1A,C2ORF54,AGXT |
| SE_02_001700729 | chr2:240816107-240821697 |
Sample_02_0017 | Embryo | H9_ESC | 729 | 1 | 140 | 20 | 0 | 71 | 165 | KIF1A,AGXT |
| SE_02_055500302 | chr2:240816423-240847947 |
Sample_02_0555 | Other | HAP1_WT | 302 | 6 | 918 | 94 | 4 | 80 | 165 | KIF1A,AGXT,C2ORF54 |
| SE_02_123500531 | chr2:240816645-240840531 |
Sample_02_1235 | Brain | Neuroblastoma PDX tumour cells | 531 | 5 | 691 | 74 | 4 | 80 | 165 | KIF1A,AGXT |
| SE_02_096600862 | chr2:240816896-240837131 |
Sample_02_0966 | Brain | H3.3K27M_JN29-BS3 | 862 | 7 | 574 | 71 | 3 | 78 | 165 | KIF1A,AGXT |
| SE_02_068701324 | chr2:240817229-240858665 |
Sample_02_0687 | Lung | NCI-H146_no infection | 1324 | 11 | 1319 | 150 | 6 | 80 | 165 | KIF1A,AGXT,C2ORF54 |
| SE_02_097400120 | chr2:240817791-240833165 |
Sample_02_0974 | Brain | H3.3K27M-KO_DIPGXIII-C14-nKO-Rx_PARENTAL_cells | 120 | 3 | 415 | 51 | 3 | 76 | 165 | KIF1A,AGXT |
| SE_02_097100636 | chr2:240817802-240836930 |
Sample_02_0971 | Brain | H3.3K27M_XPS124018_xenograft | 636 | 5 | 542 | 69 | 3 | 76 | 165 | KIF1A,AGXT |
| SE_02_096201029 | chr2:240818143-240833165 |
Sample_02_0962 | Brain | H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells | 1029 | 4 | 403 | 49 | 3 | 75 | 165 | KIF1A,AGXT |
| SE_02_101300647 | chr2:240818147-240839842 |
Sample_02_1013 | Brain | Lateral temporal lobe_6T_AD | 647 | 6 | 625 | 70 | 4 | 75 | 165 | KIF1A,AGXT |
| SE_02_068600419 | chr2:240818249-240832894 |
Sample_02_0686 | Lung | NCI-H128_no infection | 419 | 6 | 396 | 48 | 3 | 75 | 165 | KIF1A,AGXT |
Genomic distribution of SEs associated with KIF1A