SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000135424
Gene: ITGA7 Gene type: protein_coding
Strand: - External links:
Genomic region: chr12:55684568-55716043 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104602678 chr12:55686176-55704238 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2678 10 540 45 1 157 1975 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,OR10P1,GDF11
SE_01_007600336 chr12:55695744-55731397 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 336 1 904 66 4 315 3709 BLOC1S1,CD63,RDH5,ITGA7,METTL7B,GDF11
SE_01_009400338 chr12:55697986-55724775 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 338 1 682 52 3 239 2233 BLOC1S1-RDH5,ITGA7,RDH5,BLOC1S1,CD63,METTL7B,GDF11
SE_02_046500134 chr12:55698076-55714314 Sample_02_0465 Adipose subcutaneous adipocytes 134 1 423 34 0 150 1007 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
SE_01_008600243 chr12:55699022-55725132 Sample_01_0086 Thoracic aorta thoracic-aorta 243 1 661 52 3 217 2035 BLOC1S1,RDH5,ITGA7,METTL7B,GDF11,CD63
SE_01_009700669 chr12:55699043-55713743 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 669 1 381 31 0 126 795 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
SE_02_036800389 chr12:55699116-55713651 Sample_02_0368 Skeletal muscle NS134 389 1 376 30 0 126 780 ITGA7,METTL7B,RDH5,GDF11,BLOC1S1,CD63
SE_02_107800221 chr12:55700175-55718915 Sample_02_1078 Muscle RMS235_PAX3-NCOA1 221 6 468 36 0 154 964 ITGA7,BLOC1S1-RDH5,BLOC1S1,CD63,RDH5,METTL7B,GDF11
SE_02_080100186 chr12:55700310-55718959 Sample_02_0801 Brain 2235 186 3 467 36 0 149 942 ITGA7,BLOC1S1-RDH5,BLOC1S1,CD63,RDH5,METTL7B,GDF11
SE_02_092300874 chr12:55700561-55713658 Sample_02_0923 Heart fetal heart_PCW10_12522 874 3 334 27 0 107 579 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
SE_02_092500491 chr12:55700565-55713707 Sample_02_0925 Heart fetal heart_PCW17_12570 491 3 336 27 0 107 578 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
SE_02_074100519 chr12:55700703-55718917 Sample_02_0741 Muscle RH30 519 4 456 36 0 143 870 ITGA7,BLOC1S1-RDH5,BLOC1S1,CD63,RDH5,METTL7B,GDF11
SE_02_087700308 chr12:55701350-55720159 Sample_02_0877 Muscle SMS-CTR_CASZ1b_Dox 308 4 458 36 0 133 998 ITGA7,BLOC1S1,BLOC1S1-RDH5,CD63,RDH5,METTL7B,GDF11
SE_02_090700735 chr12:55701845-55714169 Sample_02_0907 Heart left ventricle_DCM_LV1223 735 1 312 28 0 89 413 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
SE_02_036700473 chr12:55701886-55713619 Sample_02_0367 Skeletal muscle NS129 473 1 294 26 0 87 413 ITGA7,METTL7B,RDH5,GDF11,BLOC1S1,CD63
SE_01_009300818 chr12:55702332-55714359 Sample_01_0093 Aorta ascending aorta 818 1 293 25 0 89 413 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
SE_00_002100357 chr12:55702383-55714339 Sample_00_0021 Lung lung_3y 357 1 290 25 0 89 413 ITGA7,METTL7B,RDH5,GDF11,BLOC1S1,CD63
SE_02_089800666 chr12:55702393-55714244 Sample_02_0898 Heart left ventricle_LV1356 666 1 288 25 0 89 413 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
SE_01_007300715 chr12:55702425-55714590 Sample_01_0073 Coronary artery coronary-artery 715 1 289 26 0 89 413 ITGA7,METTL7B,RDH5,GDF11,BLOC1S1,CD63
SE_01_008300315 chr12:55702437-55722502 Sample_01_0083 Sigmoid colon sigmoid-colon 315 1 491 40 3 175 1346 BLOC1S1,RDH5,ITGA7,METTL7B,GDF11,CD63
SE_02_089200972 chr12:55702456-55714079 Sample_02_0892 Heart left ventricle_LV1215 972 1 282 24 0 89 413 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
SE_02_089100590 chr12:55702456-55714150 Sample_02_0891 Heart left ventricle_LV1202 590 1 284 24 0 89 413 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
SE_00_002600508 chr12:55702463-55710249 Sample_00_0026 Muscle of trunk muscle-of-trunk 508 1 183 17 0 67 318 ITGA7,METTL7B,RDH5,GDF11,BLOC1S1,CD63
SE_00_002500954 chr12:55702463-55710408 Sample_00_0025 Muscle of leg muscle-of-leg 954 1 186 17 0 67 318 ITGA7,METTL7B,RDH5,GDF11,BLOC1S1,CD63
SE_02_090400534 chr12:55702555-55714226 Sample_02_0904 Heart left ventricle_DCM_LV1028 534 1 281 24 0 89 413 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
SE_01_007000525 chr12:55702560-55722470 Sample_01_0070 Ascending aorta ascending-aorta 525 1 487 40 3 175 1341 BLOC1S1,RDH5,ITGA7,METTL7B,GDF11,CD63
SE_02_088900755 chr12:55702566-55714231 Sample_02_0889 Heart left ventricle_LV1183 755 1 282 24 0 89 413 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
SE_00_003200463 chr12:55702576-55711528 Sample_00_0032 Psoas muscle psoas-muscle_30y 463 1 205 19 0 69 318 ITGA7,METTL7B,RDH5,GDF11,BLOC1S1,CD63
SE_00_005200721 chr12:55702579-55707855 Sample_00_0052 Heart left ventricle 3y 721 1 124 10 0 53 236 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
SE_00_003401014 chr12:55702629-55710193 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 1014 1 175 17 0 66 318 ITGA7,METTL7B,RDH5,GDF11,BLOC1S1,CD63
SE_02_090500856 chr12:55702633-55714127 Sample_02_0905 Heart left ventricle_DCM_LV1033 856 1 277 24 0 88 413 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
SE_02_037200697 chr12:55702660-55709008 Sample_02_0372 Skeletal muscle RMS008 697 1 145 15 0 59 318 ITGA7,METTL7B,RDH5,GDF11,BLOC1S1,CD63
SE_01_008800571 chr12:55702768-55724688 Sample_01_0088 Tibial nerve tibial-nerve 571 1 530 42 3 177 1599 BLOC1S1,RDH5,ITGA7,METTL7B,GDF11,CD63
SE_01_009800748 chr12:55702779-55713969 Sample_01_0098 Heart left ventricle_51y 748 1 267 22 0 87 404 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
SE_02_091800631 chr12:55702803-55718878 Sample_02_0918 Heart left ventricle_DCM_LV1437 631 4 382 30 0 123 695 ITGA7,BLOC1S1-RDH5,BLOC1S1,CD63,RDH5,METTL7B,GDF11
SE_02_092200809 chr12:55702811-55713682 Sample_02_0922 Heart fetal heart_PCW10_12434 809 1 256 21 0 86 402 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
SE_02_091500832 chr12:55702913-55718888 Sample_02_0915 Heart left ventricle_DCM_LV1371 832 5 381 30 0 120 677 ITGA7,BLOC1S1-RDH5,BLOC1S1,CD63,RDH5,METTL7B,GDF11
SE_01_010200214 chr12:55703249-55718296 Sample_01_0102 Artery tibial artery 214 5 365 27 0 108 607 ITGA7,BLOC1S1-RDH5,BLOC1S1,CD63,RDH5,METTL7B,GDF11
SE_02_061001065 chr12:55703524-55719268 Sample_02_0610 Liposarcoma MLS 1765-92 1065 3 371 27 0 111 661 ITGA7,BLOC1S1-RDH5,BLOC1S1,CD63,RDH5,METTL7B,GDF11
SE_02_089301018 chr12:55707874-55714265 Sample_02_0893 Heart left ventricle_LV1226 1018 1 157 15 0 36 163 ITGA7,CD63,BLOC1S1,RDH5,METTL7B,GDF11
Genomic distribution of SEs associated with ITGA7
Genome Browser

The strength of the tissue affected by the gene

Expression of ITGA7

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)