SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000184216
Gene: IRAK1 Gene type: protein_coding
Strand: - External links:
Genomic region: chrX:154010506-154019902 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_103602426 chrX:153997482-154017910 Sample_02_1036 Mammary gland HCC70_XY018 2426 13 445 23 2 50 1104 IRAK1,MIR3202-1,MIR718,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_103500722 chrX:153998930-154020647 Sample_02_1035 Mammary gland HCC70_Vehicle 722 10 455 25 3 101 1734 IRAK1,MIR718,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_111900618 chrX:153999192-154022834 Sample_02_1119 Blood KBM7 618 17 479 27 3 136 1911 IRAK1,MIR718,MECP2,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_127800671 chrX:153999629-154025321 Sample_02_1278 Chordoma UCH1_DMSO_48h 671 7 509 27 3 202 2305 IRAK1,MIR718,MECP2,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_040100366 chrX:154000966-154022667 Sample_02_0401 Mammary gland SUM159PT-T47D 366 4 442 23 2 136 1878 IRAK1,MECP2,MIR718,HCFC1,MIR3202-2,TMEM187,MIR3202-1
SE_02_110700610 chrX:154001090-154025688 Sample_02_1107 Brain SK-N-AS 610 15 491 23 2 203 2381 IRAK1,MIR718,MECP2,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_012200215 chrX:154001117-154023810 Sample_02_0122 Haematopoietic and lymphoid tissue TOLEDO 215 1 459 23 2 164 2058 IRAK1,MECP2,MIR718,HCFC1,MIR3202-2,TMEM187,MIR3202-1
SE_02_122700502 chrX:154001301-154021443 Sample_02_1227 Bone marrow U266 502 9 421 21 2 101 1734 IRAK1,MIR718,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_119101027 chrX:154001425-154023893 Sample_02_1191 Brain GBM25 1027 8 457 23 2 165 2078 IRAK1,MIR718,MECP2,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_158401080 chrX:154001496-154022852 Sample_02_1584 Brain U87 GBM_Mock 1080 4 441 23 2 136 1916 IRAK1,MIR718,MECP2,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_096800279 chrX:154001519-154023049 Sample_02_0968 Brain H3.3K27M_pcGBM2p18_cells 279 5 443 23 2 138 1955 IRAK1,MIR718,MECP2,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_064200186 chrX:154001520-154022320 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 186 6 431 21 2 135 1809 IRAK1,MIR718,MECP2,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_064300240 chrX:154001552-154021692 Sample_02_0643 Mammary gland MDA-MB-436 240 3 421 21 2 109 1738 IRAK1,MIR718,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_081500343 chrX:154001560-154021866 Sample_02_0815 Mammary gland SUM159PT 343 3 423 21 2 124 1749 IRAK1,MIR718,MECP2,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_041800260 chrX:154001616-154015993 Sample_02_0418 Embryo H9_Null+EZH2 260 3 294 19 1 36 790 IRAK1,MIR718,HCFC1,MIR3202-2,TMEM187,MIR3202-1
SE_02_143201502 chrX:154001631-154028677 Sample_02_1432 Bone A673 STAG2 WT 1502 9 552 27 3 243 2842 IRAK1,MIR718,MECP2,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_064000167 chrX:154001701-154022683 Sample_02_0640 Mammary gland MDA-MB-436_DMSO 167 10 433 23 2 136 1881 IRAK1,MIR718,MECP2,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_006800581 chrX:154001710-154019867 Sample_02_0068 Skin A375_DMSO 581 6 389 21 2 88 1624 IRAK1,MIR718,HCFC1,MIR3202-2,TMEM187,MIR3202-1
SE_02_138300603 chrX:154001735-154032944 Sample_02_1383 Pancreas Pancreatic cancer cells_THZ1 603 18 774 32 3 365 3536 IRAK1,MIR718,MECP2,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_107000371 chrX:154017269-154020884 Sample_02_1070 Blood SupT1_WT 371 1 74 2 1 51 650 IRAK1,MIR718,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
SE_02_132201243 chrX:154017355-154021664 Sample_02_1322 Connective Tissue HT1080_WT 1243 2 79 2 1 58 654 IRAK1,MIR718,MIR3202-1,HCFC1,MIR3202-2,TMEM187,HCFC1-AS1
Genomic distribution of SEs associated with IRAK1
Genome Browser

The strength of the tissue affected by the gene

Expression of IRAK1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)