SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000090339
Gene: ICAM1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr19:10271093-10286615 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_010400602 chr19:10256226-10284501 Sample_01_0104 Lung upper lobe of left lung 602 13 867 46 9 56 1152 MRPL4,ICAM1,RAVER1,ZGLP1,ICAM4,S1PR2,ICAM5,MIR4322,FDX1L
SE_02_078100450 chr19:10256920-10280175 Sample_02_0781 Lymphoma Pfeiffer_DMSO 450 1 686 37 8 44 776 MRPL4,ICAM1,ZGLP1,ICAM4,S1PR2,ICAM5,MIR4322,FDX1L
SE_02_151900253 chr19:10258004-10285002 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 253 20 826 45 8 60 1148 MRPL4,ICAM1,RAVER1,ZGLP1,ICAM4,S1PR2,ICAM5,MIR4322,FDX1L
SE_02_152000263 chr19:10258469-10278894 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 263 9 605 31 7 41 646 MRPL4,ICAM1,ZGLP1,ICAM4,S1PR2,ICAM5,MIR4322,FDX1L
SE_02_151400061 chr19:10258540-10289187 Sample_02_1514 Lung Differentiated AT1-like cells 61 10 915 54 13 87 1736 MRPL4,ICAM4,ICAM1,RAVER1,ZGLP1,S1PR2,ICAM5,MIR4322,FDX1L
SE_02_151300084 chr19:10258624-10284682 Sample_02_1513 Lung Transitional AT2->1 cells 84 5 791 44 8 50 929 MRPL4,ICAM1,RAVER1,ZGLP1,ICAM4,S1PR2,ICAM5,MIR4322,FDX1L
SE_02_103800358 chr19:10258719-10284162 Sample_02_1038 Pharynx FaDu LPS 358 12 767 43 8 45 798 MRPL4,ICAM1,RAVER1,ZGLP1,ICAM4,S1PR2,ICAM5,MIR4322,FDX1L
SE_02_151200252 chr19:10259112-10284171 Sample_02_1512 Lung Purified AT2 cells 252 5 752 43 8 45 740 MRPL4,ICAM1,RAVER1,ZGLP1,ICAM4,S1PR2,ICAM5,MIR4322,FDX1L
SE_02_147000395 chr19:10259117-10285428 Sample_02_1470 Umbilical Vein H441 395 6 803 45 9 55 1016 MRPL4,ICAM1,RAVER1,ZGLP1,ICAM4,S1PR2,ICAM5,MIR4322,FDX1L
SE_02_153300262 chr19:10259122-10284117 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 262 3 752 43 8 45 721 MRPL4,ICAM1,RAVER1,ZGLP1,ICAM4,S1PR2,ICAM5,MIR4322,FDX1L
SE_02_122600216 chr19:10259181-10276125 Sample_02_1226 Bone marrow RPMI-8226 216 6 495 26 4 32 525 MRPL4,ICAM1,ZGLP1,ICAM4,S1PR2,ICAM5,MIR4322,FDX1L
SE_02_122100816 chr19:10259258-10275627 Sample_02_1221 Bone marrow KMS11 816 7 473 24 4 32 507 MRPL4,ICAM1,ZGLP1,ICAM4,S1PR2,ICAM5,MIR4322,FDX1L
SE_02_081601199 chr19:10259309-10273057 Sample_02_0816 Ovary Clear cell ovarian cancer 1199 6 387 22 3 30 379 MRPL4,ICAM1,ZGLP1,ICAM4,S1PR2,ICAM5,MIR4322,FDX1L
SE_02_135401046 chr19:10259521-10273066 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 1046 2 381 21 3 30 327 MRPL4,ICAM1,ZGLP1,ICAM4,S1PR2,ICAM5,MIR4322,FDX1L
SE_00_004000666 chr19:10261701-10273195 Sample_00_0040 Spleen spleen_30y 666 3 313 15 1 28 164 ICAM1,MIR4322,ICAM4,FDX1L,ZGLP1,S1PR2,ICAM5,MRPL4
SE_02_122301056 chr19:10265638-10280177 Sample_02_1223 Bone marrow KMS28BM 1056 6 404 23 5 36 283 ICAM1,ZGLP1,ICAM4,S1PR2,ICAM5,MRPL4,MIR4322,FDX1L
SE_00_005500752 chr19:10267546-10280272 Sample_00_0055 Spleen spleen 34y 752 3 354 20 5 36 283 ICAM1,ZGLP1,ICAM4,S1PR2,ICAM5,MRPL4,MIR4322,FDX1L
SE_00_002200898 chr19:10267882-10273319 Sample_00_0022 Lung lung_30y 898 1 133 8 1 28 164 ICAM1,MIR4322,ICAM4,FDX1L,ZGLP1,S1PR2,ICAM5,MRPL4
SE_01_008401457 chr19:10268011-10274262 Sample_01_0084 Spleen spleen 1457 1 171 8 1 28 164 ICAM1,MIR4322,ICAM4,FDX1L,ZGLP1,S1PR2,ICAM5,MRPL4
SE_02_082700934 chr19:10268183-10276807 Sample_02_0827 Stomach normal gastric 934 3 243 12 2 30 283 ICAM1,ZGLP1,ICAM4,S1PR2,ICAM5,MRPL4,MIR4322,FDX1L
Genomic distribution of SEs associated with ICAM1
Genome Browser

The strength of the tissue affected by the gene

Expression of ICAM1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)