Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000170801 |
| Gene: | HTRA3 | Gene type: | protein_coding |
| Strand: | + | External links: |
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| Genomic region: | chr4:8269754-8307098 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_053900205 | chr4:8174054-8307010 |
Sample_02_0539 | Brain | SK-N-BE_2_-C_GFP_control | 205 | 63 | 5189 | 332 | 11 | 251 | 4299 | HTRA3,SH3TC1,ABLIM2 |
| SE_02_110800102 | chr4:8176352-8317340 |
Sample_02_1108 | Brain | SK-N-BE_2_-C | 102 | 49 | 5513 | 347 | 12 | 259 | 4348 | HTRA3,SH3TC1,ABLIM2 |
| SE_02_110500064 | chr4:8177782-8330885 |
Sample_02_1105 | Brain | NBL-S | 64 | 60 | 6004 | 437 | 14 | 276 | 4348 | HTRA3,SH3TC1,ABLIM2 |
| SE_02_110600261 | chr4:8188673-8291699 |
Sample_02_1106 | Brain | NGP | 261 | 33 | 4088 | 280 | 10 | 215 | 3414 | HTRA3,SH3TC1,ABLIM2 |
| SE_02_020700329 | chr4:8224908-8262584 |
Sample_02_0207 | Stomach | FU97 | 329 | 8 | 1475 | 98 | 3 | 76 | 1646 | SH3TC1,HTRA3 |
| SE_02_063400242 | chr4:8225316-8283585 |
Sample_02_0634 | Gastrointestinal Stromal | GIST-48B_JQ1 | 242 | 13 | 2298 | 160 | 3 | 130 | 1949 | HTRA3,SH3TC1 |
| SE_02_137200048 | chr4:8225538-8278891 |
Sample_02_1372 | Pancreas | PSN1-untreated | 48 | 27 | 2103 | 149 | 3 | 120 | 1816 | HTRA3,SH3TC1 |
| SE_02_125300783 | chr4:8227861-8277436 |
Sample_02_1253 | Mammary gland | CAMA1 ER+/FGFR1-amplified | 783 | 15 | 1957 | 139 | 2 | 92 | 1576 | HTRA3,SH3TC1 |
| SE_02_093200345 | chr4:8228206-8286062 |
Sample_02_0932 | Embryo | H9 WT_1 | 345 | 17 | 2265 | 162 | 2 | 107 | 1594 | HTRA3,SH3TC1 |
| SE_02_116200201 | chr4:8228625-8281570 |
Sample_02_1162 | Stomach | YCC11 | 201 | 26 | 2066 | 146 | 2 | 87 | 1381 | HTRA3,SH3TC1 |
| SE_02_088601154 | chr4:8232783-8280451 |
Sample_02_0886 | Skin | foreskin_ p63KLF4 | 1154 | 12 | 1848 | 127 | 1 | 79 | 990 | HTRA3,SH3TC1 |
| SE_02_034800574 | chr4:8233942-8243413 |
Sample_02_0348 | Peripheral blood | CUTLL1_wild-type | 574 | 1 | 391 | 15 | 0 | 23 | 562 | SH3TC1,HTRA3 |
| SE_02_034900512 | chr4:8234189-8243294 |
Sample_02_0349 | Peripheral blood | CUTLL1_dimer-mutant | 512 | 1 | 379 | 15 | 0 | 23 | 562 | SH3TC1,HTRA3 |
| SE_02_044600739 | chr4:8241894-8285966 |
Sample_02_0446 | Bone | osteosarcoma tumor P2 | 739 | 12 | 1651 | 123 | 1 | 64 | 368 | HTRA3,SH3TC1 |
| SE_02_061400412 | chr4:8241975-8285967 |
Sample_02_0614 | Liposarcoma | MLPS_T2 | 412 | 14 | 1647 | 123 | 1 | 64 | 368 | HTRA3,SH3TC1 |
| SE_01_009200960 | chr4:8242093-8283644 |
Sample_01_0092 | Vagina | vagina | 960 | 4 | 1557 | 115 | 1 | 59 | 368 | HTRA3,SH3TC1 |
| SE_02_034200720 | chr4:8242159-8288303 |
Sample_02_0342 | Liver | HSPCs_F0 | 720 | 12 | 1730 | 139 | 3 | 74 | 506 | HTRA3,SH3TC1 |
| SE_02_138600265 | chr4:8242443-8277912 |
Sample_02_1386 | Peripheral blood | Karpas-299_ALK+ | 265 | 8 | 1332 | 101 | 1 | 44 | 264 | HTRA3,SH3TC1 |
| SE_00_005300822 | chr4:8242527-8262605 |
Sample_00_0053 | Embryo | trophoblast cell originated from H1 | 822 | 5 | 705 | 52 | 1 | 5 | 0 | SH3TC1,HTRA3 |
| SE_02_155500242 | chr4:8242563-8278795 |
Sample_02_1555 | Gastrointestinal Stromal | GIST-4_KIT e9 | 242 | 16 | 1351 | 106 | 1 | 49 | 264 | HTRA3,SH3TC1 |
| SE_02_125100271 | chr4:8258732-8290971 |
Sample_02_1251 | Bone marrow | RS4_11_AZD1775 _10h | 271 | 14 | 1273 | 108 | 3 | 74 | 506 | HTRA3 |
| SE_02_125200379 | chr4:8258743-8282174 |
Sample_02_1252 | Bone marrow | RS4_11_DMSO_10h | 379 | 10 | 935 | 75 | 1 | 52 | 264 | HTRA3 |
| SE_02_124900297 | chr4:8258764-8290848 |
Sample_02_1249 | Bone marrow | RS4_11_DMSO_4h | 297 | 14 | 1264 | 107 | 3 | 74 | 506 | HTRA3 |
| SE_02_156500273 | chr4:8259825-8279991 |
Sample_02_1565 | Gastrointestinal Stromal | Gastrointestinal stromal tumor | 273 | 12 | 799 | 62 | 0 | 49 | 264 | HTRA3 |
| SE_02_063200359 | chr4:8259968-8282651 |
Sample_02_0632 | Gastrointestinal Stromal | GIST-48B_DMSO | 359 | 7 | 915 | 70 | 0 | 58 | 352 | HTRA3 |
| SE_02_155900704 | chr4:8260185-8279147 |
Sample_02_1559 | Gastrointestinal Stromal | GIST-8_PDGFRA e18 | 704 | 9 | 753 | 61 | 0 | 49 | 264 | HTRA3 |
| SE_02_063300303 | chr4:8260215-8285572 |
Sample_02_0633 | Gastrointestinal Stromal | GIST-48B_Imatinib | 303 | 8 | 1004 | 74 | 0 | 64 | 368 | HTRA3 |
| SE_00_002900499 | chr4:8260811-8282463 |
Sample_00_0029 | Ovary | ovary | 499 | 15 | 884 | 69 | 0 | 55 | 311 | HTRA3 |
| SE_02_021600699 | chr4:8261005-8282639 |
Sample_02_0216 | Skin | NHEK_scramble | 699 | 7 | 879 | 68 | 0 | 58 | 349 | HTRA3 |
| SE_02_155800307 | chr4:8261058-8279548 |
Sample_02_1558 | Gastrointestinal Stromal | GIST-7_PDGFRA e18 | 307 | 10 | 739 | 60 | 0 | 49 | 264 | HTRA3 |
| SE_02_125000313 | chr4:8261794-8282905 |
Sample_02_1250 | Bone marrow | RS4_11_AZD1775 _4h | 313 | 9 | 852 | 66 | 0 | 59 | 368 | HTRA3 |
| SE_02_103900313 | chr4:8261917-8281740 |
Sample_02_1039 | Peripheral blood | CD4+ CD7- cells_CTCL1043 | 313 | 3 | 797 | 63 | 0 | 52 | 264 | HTRA3 |
| SE_02_138400275 | chr4:8262617-8331173 |
Sample_02_1384 | Other | induced pluripotent stem cell derived Neuronal progenitor cell | 275 | 13 | 2667 | 243 | 5 | 138 | 1549 | HTRA3 |
| SE_02_078100762 | chr4:8267609-8330946 |
Sample_02_0781 | Lymphoma | Pfeiffer_DMSO | 762 | 23 | 2452 | 222 | 5 | 130 | 1549 | HTRA3 |
| SE_02_158600194 | chr4:8270211-8280507 |
Sample_02_1586 | Blood | SupB15 ACY1035 | 194 | 8 | 421 | 28 | 0 | 16 | 70 | HTRA3 |
| SE_02_158500310 | chr4:8271767-8280835 |
Sample_02_1585 | Blood | SupB15 DMSO | 310 | 7 | 366 | 29 | 0 | 10 | 0 | HTRA3 |
| SE_02_102600416 | chr4:8295370-8326119 |
Sample_02_1026 | Esophagus | KYSE200 | 416 | 14 | 1152 | 77 | 3 | 28 | 728 | HTRA3 |
| SE_00_002900706 | chr4:8297787-8320679 |
Sample_00_0029 | Ovary | ovary | 706 | 9 | 872 | 48 | 1 | 16 | 521 | HTRA3 |
| SE_02_061100227 | chr4:8298095-8353090 |
Sample_02_0611 | Liposarcoma | DDLPS_T1 | 227 | 18 | 2144 | 243 | 9 | 45 | 521 | HTRA3 |
| SE_02_063200249 | chr4:8304319-8323759 |
Sample_02_0632 | Gastrointestinal Stromal | GIST-48B_DMSO | 249 | 7 | 756 | 45 | 1 | 12 | 363 | HTRA3 |
| SE_02_063300316 | chr4:8305902-8323354 |
Sample_02_0633 | Gastrointestinal Stromal | GIST-48B_Imatinib | 316 | 6 | 677 | 37 | 1 | 11 | 319 | HTRA3 |
| SE_02_063400230 | chr4:8306023-8323524 |
Sample_02_0634 | Gastrointestinal Stromal | GIST-48B_JQ1 | 230 | 5 | 672 | 38 | 1 | 9 | 293 | HTRA3 |
| SE_02_155300755 | chr4:8306395-8356385 |
Sample_02_1553 | Gastrointestinal Stromal | GIST-2_KIT e11 | 755 | 19 | 1961 | 247 | 9 | 38 | 322 | HTRA3 |
| SE_02_155400992 | chr4:8306605-8345272 |
Sample_02_1554 | Gastrointestinal Stromal | GIST-3_KIT e11 | 992 | 16 | 1577 | 203 | 8 | 35 | 153 | HTRA3 |
| SE_02_121000245 | chr4:8308974-8353220 |
Sample_02_1210 | Brain | GBM17 | 245 | 16 | 1753 | 227 | 9 | 36 | 0 | HTRA3 |
| SE_02_078500102 | chr4:8329213-8353036 |
Sample_02_0785 | Brain | 2097 | 102 | 9 | 957 | 131 | 6 | 13 | 0 | HTRA3 |
| SE_00_002900396 | chr4:8340615-8354530 |
Sample_00_0029 | Ovary | ovary | 396 | 10 | 507 | 49 | 1 | 6 | 0 | HTRA3 |
Genomic distribution of SEs associated with HTRA3