Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000111906 |
| Gene: | HDDC2 | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr6:125219962-125302078 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_093700079 | chr6:125187742-125277764 |
Sample_02_0937 | Retinal Pigmented Epithelial | RPE190_Con | 79 | 42 | 2376 | 280 | 3 | 115 | 683 | TPD52L1,HDDC2 |
| SE_02_147700800 | chr6:125222335-125234489 |
Sample_02_1477 | Bone | EW-22 | 800 | 6 | 314 | 31 | 0 | 21 | 37 | TPD52L1,HDDC2 |
| SE_02_153900942 | chr6:125230725-125274588 |
Sample_02_1539 | Nasopharyngeal | C666-1 | 942 | 13 | 1134 | 145 | 1 | 61 | 409 | TPD52L1,HDDC2 |
| SE_02_053301276 | chr6:125292612-125327251 |
Sample_02_0533 | Blood vessel | Circle of Willis_54y | 1276 | 10 | 902 | 109 | 5 | 70 | 309 | HDDC2 |
| SE_02_117600592 | chr6:125311323-125364249 |
Sample_02_1176 | Brain | GBM04 | 592 | 15 | 1252 | 88 | 1 | 114 | 0 | HDDC2 |
| SE_02_098400062 | chr6:125314368-125378021 |
Sample_02_0984 | Brain | H3.3K27M-KO_DIPGXIII-C5P5 | 62 | 13 | 1560 | 107 | 2 | 149 | 0 | HDDC2 |
| SE_02_097600061 | chr6:125314390-125365328 |
Sample_02_0976 | Brain | H3.3K27M-KO_DIPGXIII-c5p5-Rx_R1_cells_h3k27ac | 61 | 12 | 1206 | 83 | 1 | 116 | 0 | HDDC2 |
| SE_02_097500129 | chr6:125315274-125364673 |
Sample_02_0975 | Brain | H3.3K27M-KO_DIPGXIII-c10p5-Rx_R2_cells | 129 | 8 | 1162 | 74 | 1 | 112 | 0 | HDDC2 |
| SE_02_053300848 | chr6:125339980-125379858 |
Sample_02_0533 | Blood vessel | Circle of Willis_54y | 848 | 11 | 959 | 66 | 2 | 123 | 0 | HDDC2 |
| SE_02_018100331 | chr6:125340160-125364327 |
Sample_02_0181 | melanoma | COLO679 | 331 | 7 | 534 | 36 | 1 | 82 | 0 | HDDC2 |
| SE_02_122401060 | chr6:125344149-125363746 |
Sample_02_1224 | Bone marrow | normal plasma cell | 1060 | 8 | 418 | 29 | 1 | 49 | 0 | HDDC2 |
| SE_02_055701084 | chr6:125345891-125378881 |
Sample_02_0557 | iPSCs | WT hiPSC#1 | 1084 | 4 | 789 | 53 | 1 | 91 | 0 | HDDC2 |
| SE_02_075601025 | chr6:125345972-125365959 |
Sample_02_0756 | Embryo | ES-derived progenitors_FG FOXA2 -/- | 1025 | 6 | 430 | 28 | 0 | 50 | 0 | HDDC2 |
| SE_02_075501414 | chr6:125356350-125365508 |
Sample_02_0755 | Embryo | ES-derived progenitors_DE FOXA2 -/- | 1414 | 3 | 211 | 18 | 0 | 21 | 0 | HDDC2 |
| SE_02_075701187 | chr6:125361669-125365665 |
Sample_02_0757 | Embryo | ES-derived progenitors_FOXA2 -/- | 1187 | 1 | 93 | 10 | 0 | 11 | 0 | HDDC2 |
| SE_02_003801567 | chr6:125361748-125364952 |
Sample_02_0038 | Embryo | DE | 1567 | 1 | 71 | 8 | 0 | 11 | 0 | HDDC2 |
| SE_00_002401173 | chr6:125362308-125364618 |
Sample_00_0024 | Embryo | mesendoderm | 1173 | 1 | 49 | 5 | 0 | 8 | 0 | HDDC2 |
| SE_02_004500704 | chr6:125362517-125364562 |
Sample_02_0045 | Embryo endodermal | CyT49_ES_D7 | 704 | 1 | 45 | 4 | 0 | 6 | 0 | HDDC2 |
| SE_02_053301159 | chr6:125410885-125447186 |
Sample_02_0533 | Blood vessel | Circle of Willis_54y | 1159 | 10 | 877 | 38 | 4 | 44 | 0 | HDDC2 |
| SE_02_075600919 | chr6:125419888-125432768 |
Sample_02_0756 | Embryo | ES-derived progenitors_FG FOXA2 -/- | 919 | 2 | 300 | 15 | 1 | 14 | 0 | HDDC2 |
| SE_02_074800751 | chr6:125420483-125428770 |
Sample_02_0748 | Mammary gland | HCC1599_WO | 751 | 1 | 183 | 10 | 1 | 11 | 0 | HDDC2 |
| SE_02_074900695 | chr6:125420507-125429003 |
Sample_02_0749 | Mammary gland | HCC1599_GSI | 695 | 1 | 187 | 10 | 1 | 11 | 0 | HDDC2 |
| SE_02_018100494 | chr6:125421575-125455330 |
Sample_02_0181 | melanoma | COLO679 | 494 | 7 | 790 | 40 | 4 | 57 | 0 | HDDC2 |
Genomic distribution of SEs associated with HDDC2