SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000138867
Gene: GUCD1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr22:24540423-24555935 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_129900342 chr22:24497370-24555176 Sample_02_1299 Liver liver 342 27 1634 144 8 89 2021 GUCD1,UPB1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B
SE_02_098900698 chr22:24498769-24565210 Sample_02_0989 Kidney kidney cortex_WT 698 14 1875 166 10 88 2342 GUCD1,UPB1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B
SE_02_125300565 chr22:24505533-24553183 Sample_02_1253 Mammary gland CAMA1 ER+/FGFR1-amplified 565 21 1356 126 8 60 1754 GUCD1,UPB1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B
SE_02_129700601 chr22:24521391-24555115 Sample_02_1297 Lung lung 601 14 922 96 7 12 1428 GUCD1,UPB1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B
SE_02_104602894 chr22:24538673-24551570 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2894 9 382 44 3 0 1005 GUCD1,SNRPD3,UPB1,GGT1,LRRC75B,ADORA2A-AS1
SE_02_104901307 chr22:24538872-24574837 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1307 17 981 92 5 0 1654 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_083500921 chr22:24540679-24556859 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 921 6 449 54 2 0 1319 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_083300825 chr22:24540844-24557110 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 825 4 456 54 2 0 1297 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_087500885 chr22:24541056-24575373 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 885 15 925 87 3 0 1536 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_149200896 chr22:24541094-24575389 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 896 11 924 87 3 0 1531 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_089801116 chr22:24542196-24567177 Sample_02_0898 Heart left ventricle_LV1356 1116 10 679 71 3 0 1117 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_088901367 chr22:24542211-24567262 Sample_02_0889 Heart left ventricle_LV1183 1367 12 680 71 3 0 1114 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_046600803 chr22:24542211-24581291 Sample_02_0466 Adipose visceral adipocytes 803 21 1036 92 3 0 1326 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_00_004600767 chr22:24542384-24565392 Sample_00_0046 Heart right ventricle_34y 767 9 638 71 3 0 1071 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_089201004 chr22:24542390-24567544 Sample_02_0892 Heart left ventricle_LV1215 1004 12 680 72 3 0 1070 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_089001093 chr22:24542805-24567546 Sample_02_0890 Heart left ventricle_LV1200 1093 8 673 71 3 0 985 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_096200670 chr22:24543228-24556604 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 670 5 374 48 1 0 838 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_098200152 chr22:24543245-24556850 Sample_02_0982 Brain H3.3K27M-KO_BT245-C2P3 152 4 377 48 1 0 831 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_095800528 chr22:24543946-24557028 Sample_02_0958 Brain H3.3K27M_Tumor_BT245-X0-2-Rx_xenograft 528 2 365 47 1 0 756 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_097200671 chr22:24544353-24557819 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 671 4 373 51 2 0 722 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_096000347 chr22:24544396-24555173 Sample_02_0960 Brain H3.3K27M_Tumor-derived cell-line_BT869p21-Rx_cells 347 5 292 42 1 0 423 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_097300419 chr22:24544520-24557112 Sample_02_0973 Brain H3.3K27M-KO_BT245-c4p6-Rx_R2_cells 419 2 344 46 1 0 685 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_00_005200850 chr22:24544776-24565664 Sample_00_0052 Heart left ventricle 3y 850 8 573 67 3 0 745 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_109600591 chr22:24544902-24556896 Sample_02_1096 Blood CD34 Erythroid cells_Don003 591 3 326 45 1 0 685 GUCD1,SNRPD3,ADORA2A-AS1,GGT1,LRRC75B,UPB1
SE_02_047501044 chr22:24547931-24554955 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 1044 2 171 26 0 0 223 GUCD1,SNRPD3,GGT1,LRRC75B
SE_00_004900273 chr22:24548561-24555136 Sample_00_0049 Small intestine small intestine 30y 273 3 163 28 0 0 211 GUCD1,SNRPD3,GGT1,LRRC75B
SE_02_047600918 chr22:24548614-24564547 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 918 5 421 51 2 0 540 GUCD1,SNRPD3,GGT1,LRRC75B
SE_02_047701062 chr22:24549005-24555271 Sample_02_0477 Colon intestinal epithelial organoids_139a 1062 2 154 25 0 0 183 GUCD1,SNRPD3,GGT1,LRRC75B
SE_02_109500618 chr22:24549742-24556748 Sample_02_1095 Blood CD34 Erythroid cells_Don002 618 2 175 24 0 0 377 GUCD1,SNRPD3,GGT1,LRRC75B
SE_02_082601274 chr22:24552871-24579155 Sample_02_0826 Stomach gastric tumor 1274 8 675 47 2 0 649 GUCD1,SNRPD3,GGT1,LRRC75B
SE_02_074601088 chr22:24553020-24579139 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 1088 7 672 47 2 0 649 GUCD1,SNRPD3,GGT1,LRRC75B
Genomic distribution of SEs associated with GUCD1
Genome Browser

The strength of the tissue affected by the gene

Expression of GUCD1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)