SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000250510
Gene: GPR162 Gene type: protein_coding
Strand: + External links:
Genomic region: chr12:6821624-6829972 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104801049 chr12:6806934-6836084 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1049 7 875 61 4 198 3243 CD4,P3H3,GPR162,USP5,TPI1,CDCA3,GNB3,PTMS,LAG3,DSTNP2,RPL13P5,SPSB2
SE_02_030400394 chr12:6815639-6830462 Sample_02_0304 Neuroblastoma N206 394 2 452 30 1 170 2498 GPR162,CD4,LEPREL2,SPSB2,TPI1,LAG3,CDCA3,PTMS,USP5,GNB3
SE_02_031300306 chr12:6815650-6830828 Sample_02_0313 Neuroblastoma SK-N-DZ 306 2 476 32 2 177 2584 GPR162,CD4,LEPREL2,SPSB2,TPI1,LAG3,CDCA3,PTMS,USP5,GNB3
SE_02_110500733 chr12:6816153-6831440 Sample_02_1105 Brain NBL-S 733 6 477 33 2 179 2586 CD4,P3H3,GPR162,USP5,TPI1,CDCA3,GNB3,PTMS,LAG3,SPSB2
SE_02_027700361 chr12:6816959-6831891 Sample_02_0277 Retina FW18 361 1 465 35 3 173 2555 GPR162,CD4,LEPREL2,SPSB2,USP5,LAG3,TPI1,CDCA3,GNB3
SE_02_001900154 chr12:6817093-6830985 Sample_02_0019 Embryo Neural crest cells 154 2 437 31 2 169 2380 GPR162,CD4,LEPREL2,SPSB2,USP5,LAG3,TPI1,CDCA3,GNB3
SE_02_027500349 chr12:6817130-6831209 Sample_02_0275 Retina FW14 349 1 443 32 2 169 2403 GPR162,CD4,LEPREL2,SPSB2,USP5,LAG3,TPI1,CDCA3,GNB3
SE_02_001700375 chr12:6817414-6831007 Sample_02_0017 Embryo H9_ESC 375 3 431 30 2 167 2310 GPR162,CD4,LEPREL2,SPSB2,USP5,LAG3,TPI1,CDCA3,GNB3
SE_02_027800411 chr12:6817765-6831093 Sample_02_0278 Retina FW24 411 1 422 31 2 166 2293 GPR162,CD4,LEPREL2,SPSB2,USP5,LAG3,TPI1,CDCA3,GNB3
SE_02_118100484 chr12:6818019-6830385 Sample_02_1181 Brain GBM10 484 3 367 26 1 158 2159 CD4,P3H3,GPR162,USP5,TPI1,CDCA3,GNB3,LAG3,SPSB2
SE_02_097000262 chr12:6818595-6830490 Sample_02_0970 Brain H3.3K27M_XHSJ019-X1-1-Rx_xenograft 262 4 345 26 1 153 2082 CD4,P3H3,GPR162,USP5,TPI1,CDCA3,GNB3,LAG3,SPSB2
SE_02_095800288 chr12:6818990-6830525 Sample_02_0958 Brain H3.3K27M_Tumor_BT245-X0-2-Rx_xenograft 288 3 327 25 1 142 1992 CD4,P3H3,GPR162,USP5,TPI1,CDCA3,GNB3,LAG3,SPSB2
SE_02_096200390 chr12:6819134-6830593 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 390 3 329 25 1 143 1974 CD4,P3H3,GPR162,USP5,TPI1,CDCA3,GNB3,LAG3,SPSB2
SE_02_142000140 chr12:6819212-6829679 Sample_02_1420 Brain DIPG007 140 2 304 24 0 133 1753 CD4,P3H3,GPR162,USP5,TPI1,CDCA3,GNB3,LAG3,SPSB2
SE_02_037300428 chr12:6819233-6830651 Sample_02_0373 Skeletal muscle RMS206 428 3 330 25 1 144 1968 GPR162,CD4,LEPREL2,SPSB2,USP5,LAG3,TPI1,CDCA3,GNB3
SE_02_095900170 chr12:6819420-6830643 Sample_02_0959 Brain H3.3K27M_BT245p6_cells 170 3 323 24 1 143 1932 CD4,P3H3,GPR162,USP5,TPI1,CDCA3,GNB3,LAG3,SPSB2
Genomic distribution of SEs associated with GPR162
Genome Browser

The strength of the tissue affected by the gene

Expression of GPR162

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)