SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000125734
Gene: GPR108 Gene type: protein_coding
Strand: - External links:
Genomic region: chr19:6729914-6737603 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_019400252 chr19:6722144-6754200 Sample_02_0194 Kidney Patient_x750T 252 4 1076 84 2 154 3291 TRIP10,GPR108,SH2D3A,VAV1,C3
SE_01_006900572 chr19:6722182-6754142 Sample_01_0069 Adrenal gland adrenal-gland 572 6 1074 83 2 154 3282 TRIP10,GPR108,SH2D3A,VAV1,C3
SE_02_001500141 chr19:6722203-6754498 Sample_02_0015 Liver HepG2_shNS 141 6 1087 84 2 155 3378 TRIP10,GPR108,SH2D3A,VAV1,C3
SE_01_007400524 chr19:6722615-6754212 Sample_01_0074 Esophagus muscularis mucosa esophagus-muscularis-mucosa 524 6 1064 84 2 154 3293 TRIP10,GPR108,SH2D3A,VAV1,C3
SE_01_008000399 chr19:6722685-6746116 Sample_01_0080 Prostate prostate 399 4 787 67 2 124 2357 TRIP10,GPR108,VAV1,SH2D3A,C3
SE_01_009100604 chr19:6722744-6754145 Sample_01_0091 Uterus uterus 604 4 1058 82 2 154 3282 TRIP10,GPR108,SH2D3A,VAV1,C3
SE_01_007700479 chr19:6722787-6754160 Sample_01_0077 Gastroesophageal sphincter gastroesophageal-sphincter 479 8 1059 82 2 154 3285 TRIP10,GPR108,SH2D3A,VAV1,C3
SE_01_009200445 chr19:6722793-6754263 Sample_01_0092 Vagina vagina 445 7 1064 83 2 154 3307 TRIP10,GPR108,SH2D3A,VAV1,C3
SE_02_010800566 chr19:6722924-6746618 Sample_02_0108 Fallopian tube FT246 566 5 809 67 2 129 2465 TRIP10,GPR108,VAV1,SH2D3A,C3
SE_01_007300661 chr19:6722979-6754189 Sample_01_0073 Coronary artery coronary-artery 661 7 1058 82 2 154 3291 TRIP10,GPR108,SH2D3A,VAV1,C3
SE_01_008300548 chr19:6722979-6754317 Sample_01_0083 Sigmoid colon sigmoid-colon 548 6 1064 82 2 154 3321 TRIP10,GPR108,SH2D3A,VAV1,C3
SE_01_007100559 chr19:6722990-6745437 Sample_01_0071 Pancreas body-of-pancreas 559 4 762 66 2 117 2284 TRIP10,GPR108,VAV1,SH2D3A,C3
SE_01_001200587 chr19:6729654-6746447 Sample_01_0012 Lung A549_dexamethasone_1h 587 3 594 53 1 127 2436 TRIP10,GPR108,VAV1,SH2D3A,C3
SE_02_081800416 chr19:6733199-6742385 Sample_02_0818 Ovary High-grade serous ovarian cancer 416 1 286 27 0 62 1015 MIR6791,TRIP10,GPR108,SH2D3A,VAV1,C3
SE_02_147100431 chr19:6733230-6741437 Sample_02_1471 Blood Outgrowth Endothelia BOEC 431 1 256 26 0 62 1004 MIR6791,TRIP10,GPR108,SH2D3A,VAV1,C3
SE_02_146900533 chr19:6733584-6741431 Sample_02_1469 Umbilical Vein HUVEC 533 1 233 23 0 61 921 MIR6791,TRIP10,GPR108,SH2D3A,VAV1,C3
SE_02_101701762 chr19:6733775-6741549 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1762 1 228 24 0 59 874 MIR6791,TRIP10,GPR108,SH2D3A,VAV1,C3
SE_02_003800204 chr19:6734928-6741926 Sample_02_0038 Embryo DE 204 1 200 22 0 51 701 TRIP10,GPR108,VAV1,SH2D3A,C3
SE_01_003700917 chr19:6735078-6741578 Sample_01_0037 Liver hepatocyte 917 1 187 22 0 51 701 TRIP10,GPR108,VAV1,SH2D3A,C3
SE_02_028600499 chr19:6735170-6741920 Sample_02_0286 Liver HuH7_IL-1alpha_1h 499 1 195 22 0 51 701 TRIP10,GPR108,VAV1,SH2D3A,C3
SE_00_004300546 chr19:6735187-6741883 Sample_00_0043 Stomach stomach_96d 546 1 194 22 0 51 701 TRIP10,GPR108,VAV1,SH2D3A,C3
SE_01_008401370 chr19:6735245-6742014 Sample_01_0084 Spleen spleen 1370 1 195 22 0 51 701 TRIP10,GPR108,VAV1,SH2D3A,C3
SE_02_039600791 chr19:6735251-6741598 Sample_02_0396 Skin NHEK-D 791 1 183 22 0 51 701 TRIP10,GPR108,VAV1,SH2D3A,C3
SE_02_003200525 chr19:6735271-6741675 Sample_02_0032 Pancreas pancreatic-islets-M 525 1 186 22 0 51 701 TRIP10,GPR108,VAV1,SH2D3A,C3
SE_00_002001443 chr19:6735495-6741806 Sample_00_0020 Large intestine large-intestine_108d 1443 1 181 19 0 51 688 TRIP10,GPR108,VAV1,SH2D3A,C3
SE_00_003601106 chr19:6735573-6741707 Sample_00_0036 Small intestine small-intestine_108days 1106 1 174 19 0 51 676 TRIP10,GPR108,VAV1,SH2D3A,C3
SE_02_004800662 chr19:6735803-6739591 Sample_02_0048 Embryo endodermal CyT49_HE 662 1 108 13 0 21 337 GPR108,VAV1,SH2D3A,C3,TRIP10
SE_02_126800543 chr19:6735948-6741348 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 543 1 156 18 0 47 560 MIR6791,TRIP10,GPR108,SH2D3A,VAV1,C3
SE_02_004300266 chr19:6737685-6739601 Sample_02_0043 Embryo endodermal CyT49_ES_D2 266 1 43 6 0 15 45 VAV1,SH2D3A,C3,GPR108,TRIP10
Genomic distribution of SEs associated with GPR108
Genome Browser

The strength of the tissue affected by the gene

Expression of GPR108

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)