SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000203618
Gene: GP1BB Gene type: protein_coding
Strand: + External links:
Genomic region: chr22:19723539-19724771 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_122900160 chr22:19717200-19725754 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 160 1 239 0 0 122 1689 SEPT5,SEPT5-GP1BB,GP1BB,TBX1
SE_04_000100393 chr22:19717537-19725390 Sample_04_0001 Blood heat shocked K562 393 1 213 0 0 122 1594 SEPT5,SEPT5-GP1BB,GP1BB,TBX1
SE_02_098800098 chr22:19721093-19741115 Sample_02_0988 Blood K562_EPZ 98 6 631 4 1 200 858 SEPT5,SEPT5-GP1BB,GP1BB,TBX1
SE_04_000200822 chr22:19721225-19725039 Sample_04_0002 Blood cold shocked K562 822 1 100 0 0 73 858 SEPT5,SEPT5-GP1BB,GP1BB,TBX1
SE_01_003900684 chr22:19721251-19726074 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 684 1 146 0 0 73 858 SEPT5-GP1BB,SEPT5,GP1BB,TBX1
SE_02_109900233 chr22:19721297-19731668 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 233 3 315 1 1 113 858 SEPT5,SEPT5-GP1BB,GP1BB,TBX1
SE_02_054500222 chr22:19721307-19731436 Sample_02_0545 Bone marrow K562 WT 222 2 308 1 1 106 858 SEPT5,SEPT5-GP1BB,GP1BB,TBX1
SE_02_113000546 chr22:19721332-19731524 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 546 2 310 1 1 106 858 SEPT5,SEPT5-GP1BB,GP1BB,TBX1
SE_02_087300232 chr22:19726006-19747588 Sample_02_0873 Colon HCT116_siGLIS2.1-5FU 232 7 728 10 2 148 0 SEPT5,SEPT5-GP1BB,GP1BB,TBX1
SE_02_107000345 chr22:19726907-19750360 Sample_02_1070 Blood SupT1_WT 345 9 794 23 2 173 0 SEPT5,SEPT5-GP1BB,GP1BB,TBX1
SE_02_021601161 chr22:19730559-19745582 Sample_02_0216 Skin NHEK_scramble 1161 3 532 8 1 116 0 TBX1,SEPT5,SEPT5-GP1BB,GP1BB
Genomic distribution of SEs associated with GP1BB
Genome Browser

The strength of the tissue affected by the gene

Expression of GP1BB

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)