Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000232284 |
| Gene: | GNG12-AS1 | Gene type: | lncRNA |
| Strand: | + | External links: |
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| Genomic region: | chr1:67832303-68202987 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_053300075 | chr1:67686912-67843905 |
Sample_02_0533 | Blood vessel | Circle of Willis_54y | 75 | 63 | 4143 | 269 | 24 | 293 | 826 | GNG12,GADD45A,GNG12-AS1 |
| SE_02_094900017 | chr1:67701067-67856673 |
Sample_02_0949 | Umbilical artery | HUAEC_WT | 17 | 81 | 4137 | 265 | 22 | 271 | 752 | GNG12,GNG12-AS1,GADD45A |
| SE_02_053400063 | chr1:67703934-67817077 |
Sample_02_0534 | Blood vessel | Circle of Willis_60y | 63 | 36 | 3056 | 168 | 17 | 187 | 321 | GNG12,GADD45A,GNG12-AS1 |
| SE_02_061400735 | chr1:67736131-67823952 |
Sample_02_0614 | Liposarcoma | MLPS_T2 | 735 | 26 | 2370 | 138 | 15 | 121 | 82 | GNG12,GNG12-AS1 |
| SE_02_082700526 | chr1:67753162-67770695 |
Sample_02_0827 | Stomach | normal gastric | 526 | 6 | 540 | 14 | 2 | 23 | 0 | GNG12,GNG12-AS1 |
| SE_02_111000287 | chr1:67765769-67814713 |
Sample_02_1110 | Other | HGrC1 | 287 | 14 | 1329 | 88 | 9 | 48 | 82 | GNG12,GNG12-AS1 |
| SE_02_046501397 | chr1:67780174-67819844 |
Sample_02_0465 | Adipose | subcutaneous adipocytes | 1397 | 20 | 1038 | 86 | 13 | 37 | 0 | GNG12,GNG12-AS1 |
| SE_02_077000184 | chr1:67784839-67850719 |
Sample_02_0770 | Ovary | OVCA429_shLuc | 184 | 36 | 1687 | 147 | 13 | 95 | 237 | GNG12,GNG12-AS1 |
| SE_02_060501398 | chr1:67785397-67815193 |
Sample_02_0605 | Skin | Skin Fibroblast_DMSO | 1398 | 8 | 780 | 64 | 9 | 28 | 0 | GNG12,GNG12-AS1 |
| SE_02_113800574 | chr1:67785608-67815928 |
Sample_02_1138 | Retinal Pigmented Epithelial | RPE1-prometaphase | 574 | 7 | 794 | 67 | 9 | 29 | 0 | GNG12,GNG12-AS1 |
| SE_02_113700731 | chr1:67786250-67815005 |
Sample_02_1137 | Retinal Pigmented Epithelial | RPE1-interphase | 731 | 9 | 756 | 64 | 9 | 26 | 0 | GNG12,GNG12-AS1 |
| SE_02_127900559 | chr1:67786333-67854347 |
Sample_02_1279 | Bone | Mesenchymal stem cells | 559 | 12 | 1758 | 159 | 13 | 98 | 237 | GNG12,GNG12-AS1 |
| SE_02_058800406 | chr1:67786385-67794971 |
Sample_02_0588 | Cervix | HeLa Kyoto_untreated | 406 | 6 | 251 | 12 | 3 | 7 | 0 | GNG12,GNG12-AS1 |
| SE_02_076800151 | chr1:67786387-67850660 |
Sample_02_0768 | Ovary | SKOV3 | 151 | 33 | 1646 | 147 | 13 | 93 | 237 | GNG12,GNG12-AS1 |
| SE_02_076600102 | chr1:67786465-67851295 |
Sample_02_0766 | Ovary | PEO1 | 102 | 30 | 1666 | 152 | 13 | 97 | 237 | GNG12,GNG12-AS1 |
| SE_02_106700414 | chr1:67786550-67806006 |
Sample_02_1067 | Bone | SJSA-1 | 414 | 12 | 544 | 40 | 8 | 19 | 0 | GNG12,GNG12-AS1 |
| SE_02_059000288 | chr1:67787161-67794554 |
Sample_02_0590 | Cervix | HeLa Kyoto_Luci PWWP2A siRNA | 288 | 7 | 211 | 10 | 3 | 6 | 0 | GNG12,GNG12-AS1 |
| SE_02_087901165 | chr1:67787161-67795006 |
Sample_02_0879 | Ovary | SVOG3e cells_Dox_12h_control | 1165 | 1 | 226 | 11 | 3 | 7 | 0 | GNG12,GNG12-AS1 |
| SE_02_058900205 | chr1:67787225-67815862 |
Sample_02_0589 | Cervix | HeLa Kyoto_Luci siRNA | 205 | 6 | 744 | 65 | 9 | 28 | 0 | GNG12,GNG12-AS1 |
| SE_02_132800793 | chr1:67787527-67815952 |
Sample_02_1328 | Non-mineralized aortic valves | aortic valve interstitial cells | 793 | 8 | 739 | 65 | 9 | 28 | 0 | GNG12,GNG12-AS1 |
| SE_02_076700089 | chr1:67787974-67850646 |
Sample_02_0767 | Ovary | OVCA429 | 89 | 41 | 1593 | 145 | 13 | 93 | 237 | GNG12,GNG12-AS1 |
| SE_02_092900273 | chr1:67788379-67823103 |
Sample_02_0929 | Mid-gestation placenta | trophoblast__CytT | 273 | 14 | 877 | 88 | 13 | 36 | 0 | GNG12,GNG12-AS1 |
| SE_02_088301399 | chr1:67789592-67795436 |
Sample_02_0883 | Ovary | SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W | 1399 | 1 | 168 | 11 | 5 | 6 | 0 | GNG12,GNG12-AS1 |
| SE_02_077101291 | chr1:67789618-67805627 |
Sample_02_0771 | Ovary | OVCA429_shGRHL2 | 1291 | 11 | 438 | 37 | 8 | 18 | 0 | GNG12,GNG12-AS1 |
| SE_02_088201322 | chr1:67789634-67795038 |
Sample_02_0882 | Ovary | SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W | 1322 | 1 | 149 | 10 | 3 | 6 | 0 | GNG12,GNG12-AS1 |
| SE_02_061001083 | chr1:67789734-67803124 |
Sample_02_0610 | Liposarcoma | MLS 1765-92 | 1083 | 3 | 366 | 34 | 8 | 18 | 0 | GNG12,GNG12-AS1 |
| SE_02_076300507 | chr1:67790342-67850675 |
Sample_02_0763 | Podocyte | podocyte_DEX | 507 | 12 | 1523 | 142 | 13 | 92 | 237 | GNG12,GNG12-AS1 |
| SE_02_093001330 | chr1:67790689-67822479 |
Sample_02_0930 | Mid-gestation placenta | trophoblast__SynT | 1330 | 11 | 793 | 82 | 13 | 34 | 0 | GNG12,GNG12-AS1 |
| SE_02_098901141 | chr1:67791958-67850805 |
Sample_02_0989 | Kidney | kidney cortex_WT | 1141 | 23 | 1482 | 144 | 12 | 92 | 237 | GNG12,GNG12-AS1 |
| SE_00_004900169 | chr1:67792564-67850137 |
Sample_00_0049 | Small intestine | small intestine 30y | 169 | 23 | 1443 | 138 | 12 | 92 | 237 | GNG12,GNG12-AS1 |
| SE_02_155401171 | chr1:67813918-67833999 |
Sample_02_1554 | Gastrointestinal Stromal | GIST-3_KIT e11 | 1171 | 9 | 480 | 49 | 4 | 42 | 237 | GNG12,GNG12-AS1 |
| SE_01_011200513 | chr1:67828229-67834618 |
Sample_01_0112 | Embryonic kidney | HEK293_encode | 513 | 2 | 148 | 9 | 0 | 20 | 237 | GNG12,GNG12-AS1 |
Genomic distribution of SEs associated with GNG12-AS1