SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000155816
Gene: FMN2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:240014348-240475187 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_095400211 chr1:240073036-240137816 Sample_02_0954 Brain H3.3K27WT_2192 211 18 1949 78 4 140 638 FMN2
SE_02_119100661 chr1:240073669-240137504 Sample_02_1191 Brain GBM25 661 18 1927 77 4 140 638 FMN2
SE_02_119500418 chr1:240074368-240140751 Sample_02_1195 Brain GBM29 418 28 1999 79 4 140 638 FMN2
SE_02_154800100 chr1:240074644-240136527 Sample_02_1548 Gastrointestinal Stromal GIST-226 100 19 1863 77 4 138 638 FMN2
SE_02_127100851 chr1:240074710-240111616 Sample_02_1271 Leiomyosarcoma SK-LMS-1_WT 851 12 1094 42 2 99 585 FMN2
SE_02_031700377 chr1:240081572-240120722 Sample_02_0317 Neuroblastoma GICAN 377 4 1136 54 2 105 585 FMN2
SE_02_061000307 chr1:240084917-240107362 Sample_02_0610 Liposarcoma MLS 1765-92 307 8 639 34 1 90 585 FMN2
SE_02_124000167 chr1:240085032-240117229 Sample_02_1240 Skin MCC13_virus_negative 167 13 931 50 1 100 585 FMN2
SE_02_106700385 chr1:240085162-240105287 Sample_02_1067 Bone SJSA-1 385 9 569 31 1 90 585 FMN2
SE_02_113701100 chr1:240085429-240107208 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 1100 9 608 34 1 90 585 FMN2
SE_02_076600308 chr1:240085434-240117377 Sample_02_0766 Ovary PEO1 308 12 916 51 1 100 585 FMN2
SE_02_042000321 chr1:240085624-240100340 Sample_02_0420 Pectoralis major muscle LHCN-M2_dox_6h 321 8 424 29 1 86 585 FMN2
SE_02_030500604 chr1:240085718-240107757 Sample_02_0305 Neuroblastoma SH-EP 604 4 613 34 1 90 585 FMN2
SE_02_113800602 chr1:240085775-240110502 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 602 9 689 37 1 95 585 FMN2
SE_02_124100140 chr1:240085825-240110357 Sample_02_1241 Skin MCC26_virus_negative 140 13 679 37 1 95 585 FMN2
SE_02_060500781 chr1:240085829-240107306 Sample_02_0605 Skin Skin Fibroblast_DMSO 781 14 598 34 1 90 585 FMN2
SE_02_127901263 chr1:240085868-240153246 Sample_02_1279 Bone Mesenchymal stem cells 1263 16 2038 85 6 144 638 FMN2
SE_02_060600862 chr1:240085930-240107155 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 862 8 590 34 1 90 585 FMN2
SE_02_111100558 chr1:240085955-240113342 Sample_02_1111 Other HGrC1_SMAD2/3KO 558 11 778 41 1 99 585 FMN2
SE_02_114800143 chr1:240085969-240094014 Sample_02_1148 Kidney WT 9-12_control_vehicle 143 2 260 23 0 73 585 FMN2
SE_02_114900249 chr1:240085989-240101711 Sample_02_1149 Kidney WT 9-12_control_Nrf2_SFN 249 5 444 29 1 87 585 FMN2
SE_02_087901193 chr1:240086020-240110415 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 1193 7 677 37 1 95 585 FMN2
SE_02_115000099 chr1:240086024-240101303 Sample_02_1150 Kidney WT 9-12_Nrf2 knockout_vehicle 99 3 431 29 1 87 585 FMN2
SE_02_150100845 chr1:240086063-240107266 Sample_02_1501 Brain SHEP-21N_NOSPIKE 845 7 588 33 1 90 585 FMN2
SE_02_113900850 chr1:240086074-240110184 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 850 7 668 36 1 92 585 FMN2
SE_02_026300860 chr1:240086081-240105629 Sample_02_0263 Osteoblastic hFOB_undifferentiated 860 4 539 30 1 90 585 FMN2
SE_02_087801121 chr1:240086107-240111483 Sample_02_0878 Ovary SVOG3e cells_noDox_control 1121 9 701 38 1 99 585 FMN2
SE_02_149700534 chr1:240086402-240102374 Sample_02_1497 Brain SHEP-21N 534 5 437 29 1 87 585 FMN2
SE_02_041900907 chr1:240086426-240110527 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 907 8 654 36 1 95 585 FMN2
SE_02_150301222 chr1:240086441-240107229 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 1222 5 562 33 1 90 585 FMN2
SE_02_088001218 chr1:240086449-240110535 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 1218 6 654 36 1 95 585 FMN2
SE_02_088101221 chr1:240086524-240111567 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 1221 9 684 38 1 99 585 FMN2
SE_02_093100521 chr1:240088460-240094217 Sample_02_0931 Embryo H9 UTXKO 521 2 178 20 0 73 585 FMN2
SE_02_141000833 chr1:240089047-240123428 Sample_02_1410 Brain GSC6 833 10 963 55 2 119 632 FMN2
SE_02_119200581 chr1:240089088-240123461 Sample_02_1192 Brain GBM26 581 16 965 55 2 121 636 FMN2
SE_01_002100303 chr1:240089096-240097816 Sample_01_0021 Skin bipolar-neuron 303 1 230 20 1 81 585 FMN2
SE_02_118700546 chr1:240089571-240137882 Sample_02_1187 Brain GBM16 546 18 1402 64 3 140 638 FMN2
SE_02_118600680 chr1:240089733-240137993 Sample_02_1186 Brain GBM15 680 14 1401 62 3 140 638 FMN2
SE_02_117400713 chr1:240089876-240137540 Sample_02_1174 Brain GBM02 713 18 1387 62 3 140 638 FMN2
SE_02_003300738 chr1:240090932-240138240 Sample_02_0033 Pancreas pancreatic-islets-F 738 9 1380 58 3 132 638 FMN2
SE_02_004700337 chr1:240091262-240153371 Sample_02_0047 Pancreatic endoderm IIDP/donor790 337 17 1865 66 6 132 638 FMN2
SE_02_120000568 chr1:240091518-240137153 Sample_02_1200 Brain GBM36 568 13 1329 55 3 125 638 FMN2
SE_02_120500739 chr1:240091608-240137442 Sample_02_1205 Brain NB3 739 23 1329 53 3 126 638 FMN2
SE_02_097900187 chr1:240091850-240139964 Sample_02_0979 Brain JN14-BS1_H3.3K27M 187 24 1394 54 3 121 604 FMN2
SE_02_118100630 chr1:240091852-240122989 Sample_02_1181 Brain GBM10 630 12 859 41 2 86 550 FMN2
SE_02_096600505 chr1:240091864-240123529 Sample_02_0966 Brain H3.3K27M_JN29-BS3 505 6 883 42 2 102 603 FMN2
SE_02_096000471 chr1:240091873-240093960 Sample_02_0960 Brain H3.3K27M_Tumor-derived cell-line_BT869p21-Rx_cells 471 1 61 2 0 54 546 FMN2
SE_02_096700408 chr1:240091935-240123906 Sample_02_0967 Brain H3.3K27M_JN57 408 15 895 42 2 93 582 FMN2
SE_02_141700390 chr1:240095639-240110889 Sample_02_1417 Brain SF7761 390 5 404 15 0 25 0 FMN2
SE_02_045200705 chr1:240138883-240211205 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 705 14 2240 65 11 108 765 FMN2
SE_02_056900088 chr1:240170918-240290079 Sample_02_0569 Periodontal ligament mesenchymal stem cell 88 62 3592 92 19 287 812 FMN2
SE_02_086900035 chr1:240208316-240359114 Sample_02_0869 Fibroblast VH10_NO_UV 35 81 4400 205 36 343 475 FMN2
SE_02_026300155 chr1:240209987-240263915 Sample_02_0263 Osteoblastic hFOB_undifferentiated 155 11 1578 20 1 108 144 FMN2
SE_02_063600019 chr1:240210060-240316371 Sample_02_0636 Skin BJ5ta 19 37 3043 129 21 280 188 FMN2
SE_02_063700088 chr1:240218410-240261746 Sample_02_0637 Fibroblast fibroblast_WT_GM07492 88 21 1249 16 1 83 101 FMN2
SE_02_045200509 chr1:240224665-240263318 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 509 10 1087 13 0 75 101 FMN2
SE_02_127900086 chr1:240225110-240316719 Sample_02_1279 Bone Mesenchymal stem cells 86 19 2560 123 20 247 145 FMN2
SE_02_141600886 chr1:240228559-240262946 Sample_02_1416 Brain SF9402 886 9 938 8 0 75 101 FMN2
SE_02_057200453 chr1:240228875-240260385 Sample_02_0572 Brain LN229_1_mM_glucose 453 10 860 7 0 75 101 FMN2
SE_02_156600016 chr1:240228899-240356488 Sample_02_1566 Dermal Dermal fibroblast 16 45 3629 188 35 282 318 FMN2
SE_02_057100900 chr1:240228919-240245618 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 900 8 459 4 0 46 57 FMN2
SE_02_154800239 chr1:240229245-240262312 Sample_02_1548 Gastrointestinal Stromal GIST-226 239 13 902 8 0 75 101 FMN2
SE_02_141500243 chr1:240229888-240263163 Sample_02_1415 Brain DIPGIV 243 8 916 8 0 75 101 FMN2
SE_02_050000289 chr1:240230015-240263946 Sample_02_0500 Fetal lung IMR90_#2 289 27 937 8 0 75 101 FMN2
SE_02_060500201 chr1:240230147-240263665 Sample_02_0605 Skin Skin Fibroblast_DMSO 201 11 926 8 0 75 101 FMN2
SE_02_127100023 chr1:240230183-240353750 Sample_02_1271 Leiomyosarcoma SK-LMS-1_WT 23 57 3518 185 34 280 285 FMN2
SE_02_049900271 chr1:240230337-240265708 Sample_02_0499 Fetal lung IMR90 IR Senescence 271 14 984 10 0 76 101 FMN2
SE_02_017300144 chr1:240230575-240259666 Sample_02_0173 Lung IMR-90_senescent 144 6 804 7 0 74 101 FMN2
SE_02_020900275 chr1:240230583-240266018 Sample_02_0209 Lung MRC-5_MRC5_1DPT 275 11 985 10 0 76 101 FMN2
SE_02_005500196 chr1:240230635-240260853 Sample_02_0055 Lung IMR-90_Nutlin-3a 196 3 833 7 0 75 101 FMN2
SE_02_049800232 chr1:240230660-240258485 Sample_02_0498 Fetal lung IMR90 Senescent_1 232 15 770 7 0 57 101 FMN2
SE_02_005400168 chr1:240230661-240260838 Sample_02_0054 Lung IMR-90_DMSO_1 168 3 833 7 0 75 101 FMN2
SE_02_060600196 chr1:240230672-240263268 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 196 12 904 8 0 75 101 FMN2
SE_02_145200453 chr1:240230910-240260029 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 453 7 809 7 0 75 101 FMN2
SE_02_072700245 chr1:240230914-240260485 Sample_02_0727 Fetal lung IMR90_Etoposide 245 6 819 7 0 75 101 FMN2
SE_02_131100847 chr1:240230936-240263515 Sample_02_1311 Bone marrow HDMSCs 847 9 909 8 0 74 101 FMN2
SE_01_001800763 chr1:240231282-240260158 Sample_01_0018 Submandibular Salivary Gland ACC112 763 3 799 7 0 73 101 FMN2
SE_02_026100427 chr1:240231287-240262801 Sample_02_0261 Osteoblastic hFOB_differentiated 427 4 866 8 0 73 101 FMN2
SE_02_026200526 chr1:240231345-240260190 Sample_02_0262 Osteoblastic hFOB_JQ1_differentiated 526 3 799 7 0 73 101 FMN2
SE_02_031700875 chr1:240231356-240262585 Sample_02_0317 Neuroblastoma GICAN 875 3 859 8 0 73 101 FMN2
SE_02_141800343 chr1:240231400-240260037 Sample_02_1418 Brain SF9427 343 5 791 7 0 73 101 FMN2
SE_02_045100645 chr1:240231462-240262263 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 645 8 848 8 0 73 101 FMN2
SE_02_017500310 chr1:240231518-240259719 Sample_02_0175 Lung IMR-90_Etoposide 310 9 777 7 0 73 101 FMN2
SE_02_026400281 chr1:240231524-240260499 Sample_02_0264 Skeletal muscle 7250-empty 281 5 796 7 0 73 101 FMN2
SE_02_155200490 chr1:240231576-240262360 Sample_02_1552 HMSCs hMSC ATCC SCRC-4000 490 15 848 8 0 73 101 FMN2
SE_02_086700411 chr1:240231597-240265782 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 411 28 949 10 0 74 101 FMN2
SE_02_041900220 chr1:240231640-240266001 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 220 15 953 10 0 74 101 FMN2
SE_02_086800375 chr1:240231668-240266792 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 375 26 977 10 0 74 101 FMN2
SE_02_113700877 chr1:240231674-240262192 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 877 10 836 8 0 73 101 FMN2
SE_02_026500794 chr1:240231688-240260140 Sample_02_0265 Skeletal muscle 7250-PAX3-FOXO1 794 5 787 7 0 73 101 FMN2
SE_02_157100184 chr1:240231712-240261420 Sample_02_1571 Fibroblast Fibroblast cells 184 6 821 7 0 73 101 FMN2
SE_01_005600958 chr1:240231740-240260244 Sample_01_0056 Bone osteoblast 958 3 788 7 0 73 101 FMN2
SE_02_088600698 chr1:240231790-240260794 Sample_02_0886 Skin foreskin_ p63KLF4 698 5 799 7 0 73 101 FMN2
SE_02_113901084 chr1:240231919-240260399 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 1084 5 784 6 0 73 101 FMN2
SE_02_145500515 chr1:240231956-240260034 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 515 6 774 6 0 73 101 FMN2
SE_02_137700903 chr1:240232064-240259991 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 903 14 770 6 0 73 101 FMN2
SE_02_143801327 chr1:240232092-240260076 Sample_02_1438 Liver LSEC 1327 6 771 6 0 73 101 FMN2
SE_02_137601145 chr1:240232096-240259744 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 1145 11 762 6 0 73 101 FMN2
SE_02_143601240 chr1:240232100-240261061 Sample_02_1436 Liver LSEC-Ctrl 1240 9 794 6 0 73 101 FMN2
SE_02_113800656 chr1:240232202-240263371 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 656 10 859 7 0 73 101 FMN2
SE_02_132800290 chr1:240232242-240263421 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 290 14 857 7 0 73 101 FMN2
SE_02_018200234 chr1:240232313-240262271 Sample_02_0182 melanoma LOX-IMVI 234 8 816 7 0 73 101 FMN2
SE_02_137800688 chr1:240232330-240260111 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 688 14 761 6 0 73 101 FMN2
SE_01_011700748 chr1:240232830-240259621 Sample_01_0117 Lung fibroblast of lung 748 8 735 6 0 68 101 FMN2
SE_02_127200269 chr1:240232940-240262353 Sample_02_1272 Leiomyosarcoma SK-LMS-1_HDAC4KO 269 25 803 7 0 66 101 FMN2
SE_02_135500412 chr1:240233351-240260527 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 412 4 738 6 0 66 101 FMN2
SE_02_042000347 chr1:240233456-240259969 Sample_02_0420 Pectoralis major muscle LHCN-M2_dox_6h 347 11 720 6 0 66 101 FMN2
SE_02_063800515 chr1:240233638-240260464 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 515 17 726 6 0 66 101 FMN2
SE_02_113300277 chr1:240233671-240260069 Sample_02_1133 Liver Hepatic stellate cells 277 8 717 6 0 66 101 FMN2
SE_02_154800066 chr1:240275772-240369592 Sample_02_1548 Gastrointestinal Stromal GIST-226 66 39 2745 179 38 196 217 FMN2
SE_02_049901084 chr1:240278968-240316439 Sample_02_0499 Fetal lung IMR90 IR Senescence 1084 19 1056 88 17 137 44 FMN2
SE_02_050001187 chr1:240280319-240316209 Sample_02_0500 Fetal lung IMR90_#2 1187 15 1016 86 16 137 44 FMN2
SE_02_086800503 chr1:240280379-240315099 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 503 19 986 82 15 126 44 FMN2
SE_02_086700792 chr1:240281660-240319237 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 792 26 1054 92 17 92 44 FMN2
SE_02_026300686 chr1:240282777-240316346 Sample_02_0263 Osteoblastic hFOB_undifferentiated 686 4 953 80 14 90 44 FMN2
SE_02_141500601 chr1:240283034-240314419 Sample_02_1415 Brain DIPGIV 601 9 903 74 11 70 44 FMN2
SE_02_113301042 chr1:240284725-240315434 Sample_02_1133 Liver Hepatic stellate cells 1042 7 865 71 12 86 44 FMN2
SE_02_056900357 chr1:240304843-240370148 Sample_02_0569 Periodontal ligament mesenchymal stem cell 357 31 1945 128 25 128 173 FMN2
SE_02_042000069 chr1:240305392-240361777 Sample_02_0420 Pectoralis major muscle LHCN-M2_dox_6h 69 14 1660 115 22 111 173 FMN2
SE_02_020900437 chr1:240308011-240353950 Sample_02_0209 Lung MRC-5_MRC5_1DPT 437 10 1368 101 19 95 140 FMN2
SE_02_045200599 chr1:240308131-240354578 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 599 16 1385 101 19 95 140 FMN2
SE_02_127200264 chr1:240308180-240353439 Sample_02_1272 Leiomyosarcoma SK-LMS-1_HDAC4KO 264 19 1343 101 19 95 140 FMN2
SE_02_060501083 chr1:240329252-240356878 Sample_02_0605 Skin Skin Fibroblast_DMSO 1083 9 816 44 9 36 142 FMN2
SE_02_060601039 chr1:240329465-240356896 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 1039 13 812 43 9 36 128 FMN2
SE_02_049901110 chr1:240329652-240356959 Sample_02_0499 Fetal lung IMR90 IR Senescence 1110 13 805 44 9 36 112 FMN2
SE_02_132800501 chr1:240329996-240356639 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 501 15 781 40 9 31 112 FMN2
SE_02_127900761 chr1:240330998-240370430 Sample_02_1279 Bone Mesenchymal stem cells 761 10 1187 56 13 63 75 FMN2
SE_02_017300408 chr1:240332629-240357308 Sample_02_0173 Lung IMR-90_senescent 408 7 733 39 9 32 75 FMN2
SE_02_026300622 chr1:240336540-240357527 Sample_02_0263 Osteoblastic hFOB_undifferentiated 622 4 636 33 7 25 33 FMN2
SE_02_113300513 chr1:240337208-240356868 Sample_02_1133 Liver Hepatic stellate cells 513 7 591 26 5 21 33 FMN2
SE_02_017500542 chr1:240337219-240357154 Sample_02_0175 Lung IMR-90_Etoposide 542 13 601 27 5 21 33 FMN2
SE_02_057200603 chr1:240337498-240356296 Sample_02_0572 Brain LN229_1_mM_glucose 603 4 570 23 4 16 33 FMN2
SE_02_057100970 chr1:240337658-240354185 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 970 6 507 20 4 15 0 FMN2
Genomic distribution of SEs associated with FMN2
Genome Browser

The strength of the tissue affected by the gene

Expression of FMN2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)