SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID:
Gene: FLJ46906 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_040700252 chr6:138622349-138662974 Sample_02_0407 Brain BT16 252 7 1063 34 1 45 0 FLJ46906,NHSL1
SE_02_041000234 chr6:138622391-138659065 Sample_02_0410 Brain BT16_NoDox 234 6 938 34 0 40 0 FLJ46906,NHSL1
SE_02_142900660 chr6:138626049-138694005 Sample_02_1429 Blood GM12878_WT 660 14 1785 80 3 106 265 FLJ46906,CCDC28A
SE_02_149300044 chr6:138631194-138698213 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 44 23 1754 96 3 106 493 FLJ46906
SE_02_078800200 chr6:138631557-138694341 Sample_02_0788 Brain 3565 200 26 1653 78 3 99 286 FLJ46906
SE_02_141000166 chr6:138633992-138693822 Sample_02_1410 Brain GSC6 166 22 1587 74 3 98 265 FLJ46906
SE_02_152100263 chr6:138634052-138694036 Sample_02_1521 Skin A375 DMSO 263 14 1589 74 3 98 265 FLJ46906
SE_02_059400641 chr6:138637934-138694329 Sample_02_0594 iPSC-derived neural progenitors 641 17 1510 76 3 99 285 FLJ46906
SE_02_085400305 chr6:138638209-138659304 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 305 5 562 21 0 32 0 FLJ46906
SE_02_095300559 chr6:138638368-138693769 Sample_02_0953 Brain H3.3K27M_1840 559 9 1488 74 3 98 265 FLJ46906
SE_02_085800289 chr6:138638906-138696825 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 289 12 1548 88 3 100 398 FLJ46906
SE_00_003100810 chr6:138643965-138694627 Sample_00_0031 Placenta placenta 810 7 1386 74 3 96 312 FLJ46906,NHSL1
SE_02_029400420 chr6:138645434-138694433 Sample_02_0294 Pancreatic L3-6_DMSO 420 10 1344 69 3 96 298 FLJ46906
SE_02_105000395 chr6:138645500-138693901 Sample_02_1050 Highly metastatic osteosarcoma MG63-3_DMSO 395 22 1334 67 3 95 265 FLJ46906
SE_02_056900986 chr6:138645653-138693702 Sample_02_0569 Periodontal ligament mesenchymal stem cell 986 14 1326 67 3 95 265 FLJ46906
SE_02_080100634 chr6:138646320-138657008 Sample_02_0801 Brain 2235 634 5 312 12 0 29 0 FLJ46906
SE_02_152200975 chr6:138646577-138693840 Sample_02_1522 Skin A375 RTKi 975 12 1300 66 3 95 265 FLJ46906
SE_02_050400401 chr6:138646666-138693890 Sample_02_0504 Esophagus KYSE510_1 401 23 1299 66 3 95 265 FLJ46906
SE_02_006300505 chr6:138648955-138694241 Sample_02_0063 Skin Keratinocytes 505 9 1246 67 3 80 272 FLJ46906
SE_02_018400176 chr6:138652909-138697374 Sample_02_0184 Skin SKMEL30 176 15 1190 74 3 78 487 FLJ46906
SE_02_021000968 chr6:138667402-138684244 Sample_02_0210 Lung MRC-5_N_1DPT 968 5 459 25 1 11 0 FLJ46906
SE_02_005701174 chr6:138673479-138694117 Sample_02_0057 Mammary gland vHMEC 1174 3 508 50 2 58 265 FLJ46906
SE_02_051700844 chr6:138673611-138695277 Sample_02_0517 Esophagus TE5 844 10 532 52 2 56 336 FLJ46906
SE_02_058400706 chr6:138673686-138693770 Sample_02_0584 Lung H1299 WT 706 3 493 49 2 55 265 FLJ46906,NHSL1
SE_02_103600691 chr6:138676724-138693738 Sample_02_1036 Mammary gland HCC70_XY018 691 7 421 43 1 55 265 FLJ46906
SE_02_154100989 chr6:138676797-138693915 Sample_02_1541 Nasopharyngeal HNE1 989 5 420 43 1 55 265 FLJ46906
SE_02_042200445 chr6:138677074-138694553 Sample_02_0422 Lung NCI-H1299_EGFP-NEO_reporter_cells_DACSB 445 4 424 44 1 55 306 FLJ46906
SE_02_021101061 chr6:138677182-138693721 Sample_02_0211 Lung MRC-5_NFD_1DPT 1061 5 407 42 1 54 265 FLJ46906
SE_02_066000857 chr6:138677233-138695927 Sample_02_0660 Mammary gland MCF10DCIS 857 12 459 49 1 56 336 FLJ46906
SE_02_018100762 chr6:138677307-138694303 Sample_02_0181 melanoma COLO679 762 7 417 44 1 55 284 FLJ46906
SE_02_066100812 chr6:138677321-138693816 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 812 6 406 42 1 54 265 FLJ46906
SE_02_018000687 chr6:138677606-138694453 Sample_02_0180 melanoma CJM 687 9 407 41 1 55 298 FLJ46906
SE_02_097100897 chr6:138677720-138693841 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 897 5 394 39 1 54 265 FLJ46906
SE_02_071900367 chr6:138678051-138695966 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 367 6 437 47 1 56 336 FLJ46906
SE_02_130500303 chr6:138680165-138693963 Sample_02_1305 Pancreas Gemcitabine resistant L3.6pl 303 6 335 36 1 54 265 FLJ46906
SE_02_102600434 chr6:138681405-138694858 Sample_02_1026 Esophagus KYSE200 434 8 333 36 1 55 336 FLJ46906
SE_02_085400553 chr6:138681999-138693731 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 553 4 293 32 1 52 265 FLJ46906
SE_01_004100794 chr6:138682074-138694115 Sample_01_0041 Skin keratinocyte 794 4 297 33 1 52 265 FLJ46906
SE_02_071201437 chr6:138682166-138693990 Sample_02_0712 Pancreas BxPC3_sgNEG 1437 6 293 32 1 52 265 FLJ46906
SE_02_070700972 chr6:138682306-138693897 Sample_02_0707 Pancreas BxPC3 WT 972 4 291 32 1 52 265 FLJ46906
SE_02_136600575 chr6:138682336-138693993 Sample_02_1366 Pancreas BxPC3-untreated 575 7 292 32 1 52 265 FLJ46906
SE_02_029300452 chr6:138682362-138694196 Sample_02_0293 Pancreatic L3-6_4SC-202 452 3 297 33 1 53 265 FLJ46906
SE_02_039601386 chr6:138682491-138694333 Sample_02_0396 Skin NHEK-D 1386 5 299 34 1 53 285 FLJ46906
SE_02_051500473 chr6:138682528-138693862 Sample_02_0515 Esophagus KYSE140 473 5 290 32 1 52 265 FLJ46906
SE_02_050300470 chr6:138682529-138693861 Sample_02_0503 Esophagus KYSE140_1 470 5 290 32 1 52 265 FLJ46906
SE_02_064800991 chr6:138682537-138696192 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 991 8 351 42 1 54 336 FLJ46906
SE_02_132201407 chr6:138682540-138693779 Sample_02_1322 Connective Tissue HT1080_WT 1407 2 288 32 1 52 265 FLJ46906
SE_02_094700711 chr6:138682555-138693890 Sample_02_0947 Tongue Cal27 711 3 290 32 1 52 265 FLJ46906
SE_02_132001308 chr6:138682556-138693899 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 1308 2 290 32 1 52 265 FLJ46906
SE_02_126100933 chr6:138682605-138693738 Sample_02_1261 Bone Im-GCT-3504_G34W_unedited 933 2 287 32 1 52 265 FLJ46906
SE_02_133400290 chr6:138682811-138693785 Sample_02_1334 Lung NCI-H1299_mutSMARCA4 290 2 281 31 1 51 265 FLJ46906
SE_02_064501096 chr6:138682829-138693938 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1096 4 281 31 1 51 265 FLJ46906
SE_01_011200500 chr6:138682849-138693864 Sample_01_0112 Embryonic kidney HEK293_encode 500 2 281 31 1 51 265 FLJ46906
SE_02_064701022 chr6:138682862-138693730 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 1022 3 278 31 1 50 265 FLJ46906
SE_02_131900304 chr6:138682874-138693716 Sample_02_1319 Connective Tissue HT1080_DDIT3 304 2 276 31 1 50 265 FLJ46906
SE_02_065201074 chr6:138682882-138693753 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 1074 5 276 31 1 50 265 FLJ46906
SE_02_064900752 chr6:138682903-138693796 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 752 3 278 31 1 50 265 FLJ46906
SE_02_065000878 chr6:138682922-138693873 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 878 2 276 30 1 50 265 FLJ46906
SE_02_064400368 chr6:138682969-138693802 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 368 2 273 30 1 50 265 FLJ46906
SE_02_064600745 chr6:138682988-138693895 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 745 3 273 29 1 50 265 FLJ46906
SE_02_077502160 chr6:138683738-138693783 Sample_02_0775 Pancreas EndoC-BH1_SE 2160 2 249 29 1 49 265 FLJ46906
SE_02_103500958 chr6:138684379-138693743 Sample_02_1035 Mammary gland HCC70_Vehicle 958 2 229 26 1 49 265 FLJ46906
SE_02_055500513 chr6:138690704-138693983 Sample_02_0555 Other HAP1_WT 513 1 64 7 1 45 265 FLJ46906
SE_02_133600041 chr6:138692196-138693673 Sample_02_1336 Lung NCI-H1299_mutSMARCA4_Dox 41 1 30 2 0 32 169 FLJ46906
Genomic distribution of SEs associated with FLJ46906
Genome Browser

The strength of the tissue affected by the gene

Expression of FLJ46906

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)