SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000135472
Gene: FAIM2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr12:49866896-49904217 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_106400219 chr12:49861299-49892898 Sample_02_1064 Brain CLB-GA-Dinaciclib_8h 219 10 999 97 16 87 1471 FAIM2,LOC101927292,NCKAP5L,LOC283332,BCDIN3D,BCDIN3D-AS1
SE_02_031400342 chr12:49861822-49915234 Sample_02_0314 Neuroblastoma SK-N-FI 342 6 1648 159 19 158 2812 FAIM2,LOC283332,NCKAP5L,BCDIN3D,AQP5,LOC100286844,AQP2
SE_02_129600254 chr12:49862677-49897815 Sample_02_1296 Perigastric lymph node Perigastric lymph node 254 14 1102 99 17 114 1665 FAIM2,LOC101927292,NCKAP5L,LOC283332,BCDIN3D,BCDIN3D-AS1
SE_02_129700392 chr12:49862693-49898906 Sample_02_1297 Lung lung 392 17 1148 104 17 118 1764 FAIM2,LOC101927292,NCKAP5L,LOC283332,BCDIN3D,BCDIN3D-AS1
SE_02_129800266 chr12:49862709-49897513 Sample_02_1298 Hilar lymph node Hilar lymph node 266 15 1086 98 17 109 1608 FAIM2,LOC101927292,NCKAP5L,LOC283332,BCDIN3D,BCDIN3D-AS1
SE_02_030800036 chr12:49863122-49915182 Sample_02_0308 Neuroblastoma SJNB1 36 7 1619 157 19 158 2812 FAIM2,LOC283332,NCKAP5L,BCDIN3D,AQP5,LOC100286844,AQP2
SE_02_031200290 chr12:49863225-49918245 Sample_02_0312 Neuroblastoma SK-N-BE_2-C 290 10 1709 167 19 169 2812 FAIM2,LOC283332,NCKAP5L,BCDIN3D,AQP5,LOC100286844,AQP2
SE_02_030400033 chr12:49863252-49915162 Sample_02_0304 Neuroblastoma N206 33 5 1617 157 19 158 2812 FAIM2,LOC283332,NCKAP5L,BCDIN3D,AQP5,LOC100286844,AQP2
SE_02_031900081 chr12:49863871-49915067 Sample_02_0319 Neuroblastoma NB-EBc1 81 11 1593 154 19 158 2812 FAIM2,LOC283332,NCKAP5L,BCDIN3D,AQP5,LOC100286844,AQP2
SE_02_025300190 chr12:49864348-49915067 Sample_02_0253 Brain BE2C_DMSO 190 6 1584 153 18 158 2812 FAIM2,LOC283332,NCKAP5L,BCDIN3D,AQP5,LOC100286844,AQP2
SE_02_119600775 chr12:49864574-49908160 Sample_02_1196 Brain GBM32 775 15 1375 125 16 149 2225 FAIM2,LOC101927292,AQP2,NCKAP5L,LOC283332,BCDIN3D,BCDIN3D-AS1
SE_02_106300187 chr12:49864983-49902911 Sample_02_1063 Brain CLB-GA-control 187 7 1202 101 15 127 2061 FAIM2,LOC101927292,AQP2,NCKAP5L,LOC283332,BCDIN3D,BCDIN3D-AS1
SE_02_042100292 chr12:49866449-49889902 Sample_02_0421 Brain BE2C_3 292 5 779 70 10 72 1184 FAIM2,NCKAP5L,BCDIN3D,LOC100286844,LOC283332
SE_02_030000186 chr12:49866464-49914898 Sample_02_0300 Neuroblastoma CLB-PE 186 7 1524 142 15 154 2812 FAIM2,LOC283332,NCKAP5L,BCDIN3D,AQP5,LOC100286844,AQP2
SE_02_031500083 chr12:49866484-49915193 Sample_02_0315 Neuroblastoma TR14 83 6 1531 142 15 154 2812 FAIM2,LOC283332,NCKAP5L,BCDIN3D,AQP5,LOC100286844,AQP2
SE_02_030300149 chr12:49866564-49915075 Sample_02_0303 Neuroblastoma LAN1 149 6 1524 142 15 154 2812 FAIM2,LOC283332,NCKAP5L,BCDIN3D,AQP5,LOC100286844,AQP2
SE_02_030900295 chr12:49866592-49890254 Sample_02_0309 Neuroblastoma SJNB6 295 3 786 69 10 76 1258 FAIM2,NCKAP5L,BCDIN3D,LOC100286844,LOC283332
SE_02_007500121 chr12:49866661-49905244 Sample_02_0075 Autonomic ganglia kelly_DMSO_3h 121 5 1227 100 13 142 2225 FAIM2,NCKAP5L,BCDIN3D,LOC100286844,AQP2,LOC283332
SE_02_029800241 chr12:49866664-49914876 Sample_02_0298 Neuroblastoma CLB-GA 241 7 1515 140 15 154 2812 FAIM2,LOC283332,NCKAP5L,BCDIN3D,AQP5,LOC100286844,AQP2
SE_02_031300061 chr12:49866679-49915219 Sample_02_0313 Neuroblastoma SK-N-DZ 61 8 1523 141 15 154 2812 FAIM2,LOC283332,NCKAP5L,BCDIN3D,AQP5,LOC100286844,AQP2
SE_02_120300381 chr12:49866861-49908200 Sample_02_1203 Brain NB1 381 9 1308 115 14 147 2201 FAIM2,LOC101927292,AQP2,NCKAP5L,LOC283332,BCDIN3D,BCDIN3D-AS1
SE_02_104301535 chr12:49866898-49895554 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1535 9 915 77 12 91 1443 FAIM2,LOC101927292,NCKAP5L,LOC283332,BCDIN3D,BCDIN3D-AS1
SE_02_117300415 chr12:49866925-49908052 Sample_02_1173 Brain GBM01 415 20 1300 115 14 147 2197 FAIM2,LOC101927292,AQP2,NCKAP5L,LOC283332,BCDIN3D,BCDIN3D-AS1
SE_02_120400428 chr12:49866940-49908231 Sample_02_1204 Brain NB2 428 10 1304 115 14 147 2192 FAIM2,LOC101927292,AQP2,NCKAP5L,LOC283332,BCDIN3D,BCDIN3D-AS1
SE_02_120500461 chr12:49867057-49907993 Sample_02_1205 Brain NB3 461 15 1297 114 14 147 2162 FAIM2,LOC101927292,AQP2,NCKAP5L,LOC283332,BCDIN3D,BCDIN3D-AS1
SE_02_066300422 chr12:49867323-49896176 Sample_02_0663 Thyroid TT 422 5 922 78 13 93 1354 FAIM2,LOC101927292,NCKAP5L,LOC283332,BCDIN3D,BCDIN3D-AS1
SE_02_121300480 chr12:49867364-49908299 Sample_02_1213 Brain GBM31 480 13 1290 114 14 147 2090 FAIM2,LOC101927292,AQP2,NCKAP5L,LOC283332,BCDIN3D,BCDIN3D-AS1
SE_02_101300430 chr12:49867761-49896365 Sample_02_1013 Brain Lateral temporal lobe_6T_AD 430 13 913 79 13 91 1251 FAIM2,LOC101927292,NCKAP5L,LOC283332,BCDIN3D,BCDIN3D-AS1
SE_02_125300843 chr12:49883794-49899086 Sample_02_1253 Mammary gland CAMA1 ER+/FGFR1-amplified 843 1 479 31 3 76 903 FAIM2,LOC101927292,BCDIN3D,LOC283332
SE_02_024200306 chr12:49884948-49923759 Sample_02_0242 Colon V481 306 3 1164 110 7 128 2283 FAIM2,LOC283332,BCDIN3D,AQP2,AQP5,AQP6
SE_02_024100618 chr12:49886746-49895678 Sample_02_0241 Colon V456 618 2 268 18 2 52 610 FAIM2,BCDIN3D,LOC283332
SE_02_074900723 chr12:49887263-49897538 Sample_02_0749 Mammary gland HCC1599_GSI 723 2 291 19 3 63 735 FAIM2,LOC101927292,BCDIN3D,LOC283332
SE_02_118100942 chr12:49901915-49905249 Sample_02_1181 Brain GBM10 942 1 96 10 0 19 286 FAIM2,LOC101927292,AQP2,LOC283332
Genomic distribution of SEs associated with FAIM2
Genome Browser

The strength of the tissue affected by the gene

Expression of FAIM2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)