SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000261150
Gene: EPPK1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr8:143857324-143878467 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_021600247 chr8:143845733-143889001 Sample_02_0216 Skin NHEK_scramble 247 11 1357 78 4 181 1583 EPPK1,PUF60,MIR937,NRBP2,SCRIB
SE_02_103500541 chr8:143852339-143887677 Sample_02_1035 Mammary gland HCC70_Vehicle 541 22 1105 67 4 179 1583 EPPK1,MIR937,SCRIB,PUF60,MIR6845,NRBP2
SE_02_055200173 chr8:143852416-143894460 Sample_02_0552 Other SYO1 shCt 173 21 1430 94 4 179 1583 EPPK1,MIR937,SCRIB,PLEC,PUF60,MIR6845,NRBP2
SE_02_138400154 chr8:143852421-143891271 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 154 17 1265 77 4 179 1583 EPPK1,MIR937,SCRIB,PUF60,PLEC,MIR6845,NRBP2
SE_02_103601706 chr8:143858028-143866614 Sample_02_1036 Mammary gland HCC70_XY018 1706 1 24 6 0 12 121 EPPK1,MIR937,SCRIB,PUF60,MIR6845,NRBP2
SE_02_049600211 chr8:143858507-143874953 Sample_02_0496 Mammary gland C49R 211 9 496 26 3 141 1583 EPPK1,MIR937,SCRIB,PUF60,MIR6845,NRBP2
SE_02_010600062 chr8:143866062-143892987 Sample_02_0106 Skin NHEK_M 62 9 1153 77 4 179 1583 EPPK1,PUF60,PLEC,MIR937,NRBP2,SCRIB
SE_02_114400088 chr8:143867280-143886066 Sample_02_1144 Peripheral nerve S462_PRC2 mutant 88 7 785 45 4 158 1361 EPPK1,MIR6845,PUF60,NRBP2
SE_02_039601292 chr8:143868049-143881521 Sample_02_0396 Skin NHEK-D 1292 1 572 29 3 137 1223 EPPK1,PUF60,MIR937,NRBP2,SCRIB
SE_02_078000664 chr8:143870447-143887583 Sample_02_0780 Liver SMMC-7721 664 6 635 42 3 94 675 EPPK1,MIR6845,PUF60,NRBP2
SE_02_127300077 chr8:143871024-143888005 Sample_02_1273 Cervix HeLa 77 6 612 41 1 85 565 EPPK1,MIR6845,PUF60,NRBP2
SE_02_085200482 chr8:143871307-143887276 Sample_02_0852 Mammary gland MCF7L-P 482 3 562 39 1 76 513 EPPK1,MIR6845,PUF60,NRBP2
SE_02_115900484 chr8:143871307-143887276 Sample_02_1159 Mammary gland MCF7 484 3 562 39 1 76 513 EPPK1,MIR6845,PUF60,NRBP2,SCRIB,PLEC
SE_02_087200185 chr8:143872530-143893123 Sample_02_0872 Colon HCT116_siCtrl-5FU 185 10 769 56 1 48 233 EPPK1,PUF60,PLEC,MIR6845,NRBP2
SE_02_087400086 chr8:143872607-143891875 Sample_02_0874 Colon HCT116_siGLIS2.2-5FU 86 11 705 48 1 48 212 EPPK1,PUF60,PLEC,MIR6845,NRBP2
SE_02_104601615 chr8:143872908-143911606 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1615 9 1406 111 8 52 137 EPPK1,PLEC,PUF60,MIR6845,NRBP2,MIR661
SE_02_081800404 chr8:143872994-143906861 Sample_02_0818 Ovary High-grade serous ovarian cancer 404 7 1260 103 4 47 113 EPPK1,PLEC,PUF60,MIR6845,NRBP2,MIR661
SE_02_044100195 chr8:143873135-143889785 Sample_02_0441 Bone M112 195 3 583 36 1 38 68 EPPK1,PUF60,PLEC,MIR6845,NRBP2
SE_02_066500198 chr8:143873315-143886153 Sample_02_0665 Prostate RWPE1 Schlap1 rep1 198 4 421 29 1 35 31 EPPK1,MIR6845,PUF60,NRBP2,PLEC,SCRIB,EXOSC4,PARP10
SE_01_006100307 chr8:143873323-143890772 Sample_01_0061 Prostate RWPE1 307 3 624 40 1 38 29 PUF60,NRBP2,EPPK1,SCRIB,PLEC
SE_02_066600417 chr8:143873359-143888942 Sample_02_0666 Prostate RWPE1 Lacz rep1 417 5 534 34 1 38 17 EPPK1,MIR6845,PUF60,NRBP2,PLEC,SCRIB,EXOSC4,PARP10
SE_02_154100560 chr8:143873379-143889747 Sample_02_1541 Nasopharyngeal HNE1 560 6 572 36 1 38 11 EPPK1,PUF60,PLEC,MIR6845,NRBP2
SE_02_136101096 chr8:143873511-143890325 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 1096 4 597 37 1 38 0 EPPK1,PUF60,PLEC,MIR6845,NRBP2
SE_02_081900862 chr8:143873539-143915296 Sample_02_0819 Ovary Mucinous ovarian cancer 862 7 1516 127 12 51 77 PLEC,EPPK1,PUF60,MIR6845,NRBP2,MIR661
SE_02_102600436 chr8:143873869-143890089 Sample_02_1026 Esophagus KYSE200 436 6 568 35 1 38 0 EPPK1,PUF60,PLEC,MIR6845,NRBP2
SE_02_136200956 chr8:143873878-143890223 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 956 3 575 36 1 38 0 EPPK1,PUF60,PLEC,MIR6845,NRBP2
SE_02_129900371 chr8:143874331-143907023 Sample_02_1299 Liver liver 371 12 1206 102 4 47 0 EPPK1,PLEC,PUF60,MIR6845,NRBP2,MIR661
SE_02_153900390 chr8:143874595-143889688 Sample_02_1539 Nasopharyngeal C666-1 390 5 520 34 1 38 0 EPPK1,PUF60,PLEC,MIR6845,NRBP2
SE_02_022700161 chr8:143876223-143889684 Sample_02_0227 Oesophagus TE7 161 5 462 30 1 38 0 PUF60,NRBP2,EPPK1,PLEC
SE_02_050700206 chr8:143876257-143889571 Sample_02_0507 Esophagus TE7_1 206 8 458 30 1 38 0 EPPK1,MIR6845,PUF60,NRBP2
SE_02_087300347 chr8:143880885-143888822 Sample_02_0873 Colon HCT116_siGLIS2.1-5FU 347 6 298 20 1 19 0 MIR6845,EPPK1,NRBP2
SE_02_039601588 chr8:143882026-143892953 Sample_02_0396 Skin NHEK-D 1588 1 451 40 1 18 0 PUF60,PLEC,EPPK1,NRBP2
SE_02_087100187 chr8:143882908-143890036 Sample_02_0871 Colon HCT116_GLIS2.2-DMSO 187 7 289 17 0 17 0 MIR6845,EPPK1,NRBP2,PLEC
SE_02_021100837 chr8:143884134-143904887 Sample_02_0211 Lung MRC-5_NFD_1DPT 837 5 817 77 3 19 0 PUF60,PLEC,MIR661,EPPK1,NRBP2
SE_02_051700679 chr8:143884163-143890765 Sample_02_0517 Esophagus TE5 679 1 279 19 0 10 0 MIR6845,EPPK1,NRBP2,PLEC
SE_02_050600677 chr8:143884262-143890765 Sample_02_0506 Esophagus TE5_1 677 1 273 19 0 10 0 MIR6845,EPPK1,NRBP2,PLEC
SE_02_043900335 chr8:143884909-143887804 Sample_02_0439 Bone Hu09 335 1 112 9 0 6 0 MIR6845,EPPK1,NRBP2
SE_02_074800222 chr8:143902490-143908403 Sample_02_0748 Mammary gland HCC1599_WO 222 1 189 15 4 1 0 EPPK1,PLEC,MIR661
SE_02_074900126 chr8:143902511-143908501 Sample_02_0749 Mammary gland HCC1599_GSI 126 1 191 15 4 1 0 EPPK1,PLEC,MIR661
Genomic distribution of SEs associated with EPPK1
Genome Browser

The strength of the tissue affected by the gene

Expression of EPPK1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)