SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000164176
Gene: EDIL3 Gene type: protein_coding
Strand: - External links:
Genomic region: chr5:83940554-84384880 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_030100783 chr5:84217713-84305891 Sample_02_0301 Neuroblastoma GIMEN 783 13 2196 17 8 180 71 EDIL3
SE_02_031200413 chr5:84217745-84309549 Sample_02_0312 Neuroblastoma SK-N-BE_2-C 413 11 2272 17 8 191 71 EDIL3
SE_02_149800177 chr5:84235967-84309231 Sample_02_1498 Brain SHEP-21N_DOX_2h 177 23 1809 11 5 180 38 EDIL3
SE_02_150300314 chr5:84236024-84308675 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 314 28 1798 11 5 179 38 EDIL3
SE_02_150100342 chr5:84236560-84308476 Sample_02_1501 Brain SHEP-21N_NOSPIKE 342 21 1773 11 5 178 38 EDIL3
SE_02_150200423 chr5:84237017-84305248 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 423 25 1687 11 5 169 38 EDIL3
SE_02_149700225 chr5:84237079-84308626 Sample_02_1497 Brain SHEP-21N 225 17 1760 11 5 178 38 EDIL3
SE_02_083900259 chr5:84239773-84303381 Sample_02_0839 Embryo hNPCs_K755R/+ 259 17 1574 10 3 158 38 EDIL3
SE_02_011000800 chr5:84272027-84309441 Sample_02_0110 Ovaries IOE11 800 4 921 5 1 87 0 EDIL3
SE_02_010800881 chr5:84272796-84307095 Sample_02_0108 Fallopian tube FT246 881 6 852 5 1 83 0 EDIL3
SE_02_150700576 chr5:84273005-84304582 Sample_02_1507 Brain SHEP-21N_DOX_24h 576 11 791 5 1 74 0 EDIL3
SE_02_124000360 chr5:84273171-84307811 Sample_02_1240 Skin MCC13_virus_negative 360 18 858 5 1 84 0 EDIL3
SE_02_111000609 chr5:84273787-84307866 Sample_02_1110 Other HGrC1 609 13 847 5 1 84 0 EDIL3
SE_02_048100987 chr5:84274017-84305087 Sample_02_0481 Mammary gland MDA-MB231 987 11 784 5 1 74 0 EDIL3
SE_02_099000206 chr5:84274345-84308377 Sample_02_0990 Breast cancer brain metastatic variant MDA-MB-231 BrM2 206 8 851 5 1 83 0 EDIL3
SE_02_127801150 chr5:84274956-84307881 Sample_02_1278 Chordoma UCH1_DMSO_48h 1150 8 825 5 1 82 0 EDIL3
SE_02_084600688 chr5:84286017-84303573 Sample_02_0846 Mammary gland MDA-MB-231_untreat 688 10 458 4 0 37 0 EDIL3
SE_02_076201622 chr5:84286665-84308281 Sample_02_0762 Podocyte podocyte_CTL 1622 6 536 4 0 41 0 EDIL3
SE_02_015100629 chr5:84286682-84308615 Sample_02_0151 Mammary gland MDA-MB-231_TA1del 629 4 543 4 0 41 0 EDIL3
SE_02_135100563 chr5:84286684-84307853 Sample_02_1351 Mammary gland MDA-MB-231-Erbeta_vehicle 563 6 525 4 0 41 0 EDIL3
SE_02_044801006 chr5:84286731-84309245 Sample_02_0448 Bone MNNG 1006 18 557 4 0 43 0 EDIL3
SE_02_015000307 chr5:84286778-84309477 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 307 2 559 4 0 43 0 EDIL3
SE_02_122800605 chr5:84286784-84308230 Sample_02_1228 Mammary gland MDA-MB-231_2 605 12 535 4 0 41 0 EDIL3
SE_02_126301636 chr5:84286798-84308037 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 1636 6 528 4 0 40 0 EDIL3
SE_02_053100204 chr5:84286807-84309279 Sample_02_0531 Mammary gland MDA-MB-231 204 16 557 4 0 42 0 EDIL3
SE_02_081100318 chr5:84286808-84309212 Sample_02_0811 Thyroid BCPAP 318 11 556 4 0 42 0 EDIL3
SE_02_126601026 chr5:84287167-84303347 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 1026 11 424 4 0 25 0 EDIL3
SE_02_099200529 chr5:84287244-84308084 Sample_02_0992 Mammary gland MDA-MB-231_Par 529 7 522 4 0 39 0 EDIL3
SE_02_135300849 chr5:84287259-84306721 Sample_02_1353 Mammary gland MDA-MB-231-Erbeta_TNFa 849 7 497 4 0 38 0 EDIL3
SE_02_113601019 chr5:84287339-84297739 Sample_02_1136 Bone U2OS-anaphase/telophase 1019 5 256 2 0 18 0 EDIL3
SE_02_093900221 chr5:84287363-84308345 Sample_02_0939 Mammary gland MDA-MB-231_control 221 7 528 4 0 39 0 EDIL3
SE_02_150300192 chr5:84337058-84394546 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 192 14 1356 5 1 118 210 EDIL3
SE_02_150100228 chr5:84339358-84385444 Sample_02_1501 Brain SHEP-21N_NOSPIKE 228 13 1097 1 1 96 210 EDIL3
SE_02_126600124 chr5:84353672-84404820 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 124 9 1189 8 1 120 210 EDIL3
SE_02_126500264 chr5:84353948-84404412 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 264 7 1179 8 1 120 210 EDIL3
SE_02_077600636 chr5:84354243-84386349 Sample_02_0776 Pancreas EndoC-BH1 636 4 784 2 1 88 210 EDIL3
SE_02_135100246 chr5:84354370-84394736 Sample_02_1351 Mammary gland MDA-MB-231-Erbeta_vehicle 246 10 962 4 1 105 210 EDIL3
SE_02_044600404 chr5:84357514-84439208 Sample_02_0446 Bone osteosarcoma tumor P2 404 20 1903 12 2 144 210 EDIL3
SE_02_011000241 chr5:84360820-84405583 Sample_02_0110 Ovaries IOE11 241 4 1017 8 1 119 210 EDIL3
SE_02_011100166 chr5:84361394-84386548 Sample_02_0111 Ovaries IOE4 166 2 592 2 1 85 210 EDIL3
SE_02_088100393 chr5:84361486-84405049 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 393 6 992 8 1 118 210 EDIL3
SE_02_149800247 chr5:84361686-84384893 Sample_02_1498 Brain SHEP-21N_DOX_2h 247 4 557 1 0 79 178 EDIL3
SE_02_135500760 chr5:84361881-84404726 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 760 5 975 8 1 117 210 EDIL3
SE_02_047400634 chr5:84361889-84404973 Sample_02_0474 Fibroblast umbilical cord Fibroblast 634 8 981 8 1 117 210 EDIL3
SE_02_137800690 chr5:84361924-84405436 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 690 21 986 8 1 118 210 EDIL3
SE_02_131100297 chr5:84361952-84404377 Sample_02_1311 Bone marrow HDMSCs 297 6 965 8 1 117 210 EDIL3
SE_02_135600620 chr5:84361993-84385422 Sample_02_1356 Umbilical cord umbilical cord-derived mesenchymal stem cells_Young 620 5 557 1 1 80 210 EDIL3
SE_02_149700265 chr5:84362042-84384928 Sample_02_1497 Brain SHEP-21N 265 4 544 1 0 79 184 EDIL3
SE_02_083900304 chr5:84362046-84385002 Sample_02_0839 Embryo hNPCs_K755R/+ 304 5 544 1 0 79 210 EDIL3
SE_02_150200520 chr5:84362050-84386319 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 520 5 571 2 1 85 210 EDIL3
SE_02_127900474 chr5:84362272-84405098 Sample_02_1279 Bone Mesenchymal stem cells 474 8 974 8 1 118 210 EDIL3
SE_02_087900385 chr5:84362296-84404745 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 385 7 967 8 1 117 210 EDIL3
SE_02_010800084 chr5:84362300-84387144 Sample_02_0108 Fallopian tube FT246 84 6 581 2 1 86 210 EDIL3
SE_02_081100199 chr5:84362480-84404894 Sample_02_0811 Thyroid BCPAP 199 16 966 8 1 117 210 EDIL3
SE_02_143600628 chr5:84362510-84385522 Sample_02_1436 Liver LSEC-Ctrl 628 6 549 1 1 80 210 EDIL3
SE_02_076200793 chr5:84362674-84412435 Sample_02_0762 Podocyte podocyte_CTL 793 7 1124 11 2 138 210 EDIL3
SE_02_126300540 chr5:84362786-84405417 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 540 7 966 8 1 118 210 EDIL3
SE_02_143800799 chr5:84362904-84385572 Sample_02_1438 Liver LSEC 799 5 535 1 1 81 210 EDIL3
SE_02_143700965 chr5:84363181-84405273 Sample_02_1437 Liver LSEC-TNF 965 7 956 8 1 118 210 EDIL3
SE_02_063800562 chr5:84363248-84404334 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 562 14 936 8 1 117 210 EDIL3
SE_02_087800401 chr5:84363585-84404747 Sample_02_0878 Ovary SVOG3e cells_noDox_control 401 7 938 8 1 117 210 EDIL3
SE_02_135300484 chr5:84363797-84394722 Sample_02_1353 Mammary gland MDA-MB-231-Erbeta_TNFa 484 10 717 4 1 102 210 EDIL3
SE_02_088300885 chr5:84363853-84405411 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 885 9 943 8 1 118 210 EDIL3
SE_02_088000395 chr5:84363854-84404780 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 395 6 930 8 1 117 210 EDIL3
SE_02_141500489 chr5:84364927-84385212 Sample_02_1415 Brain DIPGIV 489 9 479 1 0 79 210 EDIL3
SE_02_131000289 chr5:84368666-84404448 Sample_02_1310 Bone marrow ASMSCs 289 6 793 8 1 117 210 EDIL3
SE_02_127300830 chr5:84369822-84394765 Sample_02_1273 Cervix HeLa 830 8 560 4 1 102 210 EDIL3
SE_02_124000223 chr5:84370193-84394551 Sample_02_1240 Skin MCC13_virus_negative 223 10 551 4 1 101 210 EDIL3
SE_02_119900410 chr5:84370228-84394625 Sample_02_1199 Brain GBM35 410 9 552 4 1 101 210 EDIL3
SE_02_126400203 chr5:84370315-84404628 Sample_02_1264 Bone Im-GCT-4072_G34W KO 203 6 765 8 1 116 210 EDIL3
SE_02_008800187 chr5:84371298-84384588 Sample_02_0088 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_0 187 2 303 1 0 67 98 EDIL3
SE_01_005600483 chr5:84371324-84405370 Sample_01_0056 Bone osteoblast 483 3 749 8 1 113 210 EDIL3
SE_02_003000244 chr5:84371340-84379495 Sample_02_0030 Kidney human kidney proximal tubule cells 244 4 187 1 0 23 0 EDIL3
SE_02_030500326 chr5:84371341-84405328 Sample_02_0305 Neuroblastoma SH-EP 326 3 747 8 1 113 210 EDIL3
SE_02_009100300 chr5:84371407-84384859 Sample_02_0091 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_0 300 3 306 1 0 73 174 EDIL3
SE_02_111100652 chr5:84371477-84404969 Sample_02_1111 Other HGrC1_SMAD2/3KO 652 5 738 8 1 112 210 EDIL3
SE_02_157100544 chr5:84371484-84403907 Sample_02_1571 Fibroblast Fibroblast cells 544 4 716 8 1 109 210 EDIL3
SE_02_084000697 chr5:84371500-84384982 Sample_02_0840 Embryo hNPCs_R1159Q/+ 697 5 308 1 0 74 205 EDIL3
SE_01_001900227 chr5:84371508-84405203 Sample_01_0019 Brain and spinal cord astrocyte 227 4 742 8 1 113 210 EDIL3
SE_02_008900400 chr5:84371544-84383682 Sample_02_0089 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_3 400 3 279 1 0 58 0 EDIL3
SE_02_086700890 chr5:84371545-84403674 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 890 13 711 8 1 109 210 EDIL3
SE_02_030100351 chr5:84371585-84408925 Sample_02_0301 Neuroblastoma GIMEN 351 5 815 10 2 129 210 EDIL3
SE_02_099100897 chr5:84371590-84405113 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 897 8 741 8 1 113 210 EDIL3
SE_02_041900929 chr5:84371599-84384995 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 929 8 307 1 0 74 210 EDIL3
SE_02_113600911 chr5:84371601-84384932 Sample_02_1136 Bone U2OS-anaphase/telophase 911 5 307 1 0 74 185 EDIL3
SE_02_125900166 chr5:84371607-84404465 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 166 7 729 8 1 112 210 EDIL3
SE_02_111000175 chr5:84371622-84404881 Sample_02_1110 Other HGrC1 175 8 736 8 1 111 210 EDIL3
SE_02_049901605 chr5:84371648-84385220 Sample_02_0499 Fetal lung IMR90 IR Senescence 1605 7 313 1 1 73 210 EDIL3
SE_02_027400704 chr5:84371650-84385569 Sample_02_0274 Endometriosis hTERT_KD 704 3 320 1 1 75 210 EDIL3
SE_00_002300681 chr5:84371681-84385849 Sample_00_0023 Embryo mesenchymal-stem-cell 681 4 324 1 1 79 210 EDIL3
SE_02_076300800 chr5:84371750-84386614 Sample_02_0763 Podocyte podocyte_DEX 800 2 338 2 1 79 210 EDIL3
SE_02_150700343 chr5:84371751-84385666 Sample_02_1507 Brain SHEP-21N_DOX_24h 343 4 321 1 1 75 210 EDIL3
SE_02_135400914 chr5:84371816-84403813 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 914 7 711 8 1 108 210 EDIL3
SE_02_126100170 chr5:84371848-84404689 Sample_02_1261 Bone Im-GCT-3504_G34W_unedited 170 11 730 8 1 111 210 EDIL3
SE_02_137900261 chr5:84371852-84404891 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 261 15 734 8 1 111 210 EDIL3
SE_02_135200739 chr5:84371898-84394943 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 739 9 519 4 1 98 210 EDIL3
SE_02_126700747 chr5:84372053-84405615 Sample_02_1267 Bone Im-GCT-4072_G34W 747 9 746 8 1 113 210 EDIL3
SE_02_126000321 chr5:84372063-84404689 Sample_02_1260 Bone Im-GCT-3504_G34W-repair_4F5 321 11 725 8 1 111 210 EDIL3
SE_02_126200445 chr5:84372191-84385107 Sample_02_1262 Bone Im-GCT-3504_G34W 445 3 298 1 0 73 210 EDIL3
SE_02_088201179 chr5:84372223-84404907 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 1179 6 724 8 1 111 210 EDIL3
SE_02_148000265 chr5:84372247-84413957 Sample_02_1480 Bone MHH-ES-1 265 10 927 12 2 132 210 EDIL3
SE_02_136400389 chr5:84372258-84385294 Sample_02_1364 Pancreas pancreatic tumor_associated fibroblasts_triptolide_18h 389 7 300 1 1 73 210 EDIL3
SE_02_124100819 chr5:84372294-84394577 Sample_02_1241 Skin MCC26_virus_negative 819 7 502 4 1 96 210 EDIL3
SE_02_076700649 chr5:84372364-84404013 Sample_02_0767 Ovary OVCA429 649 11 704 8 1 110 210 EDIL3
SE_02_126900335 chr5:84372373-84394550 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 335 6 500 4 1 95 210 EDIL3
SE_02_141600906 chr5:84372460-84404354 Sample_02_1416 Brain SF9402 906 6 710 8 1 110 210 EDIL3
SE_02_093601033 chr5:84372521-84405044 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 1033 5 720 8 1 110 210 EDIL3
SE_02_115000151 chr5:84373410-84385262 Sample_02_1150 Kidney WT 9-12_Nrf2 knockout_vehicle 151 3 270 1 1 70 210 EDIL3
SE_02_132800487 chr5:84373515-84393925 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 487 4 450 4 1 93 210 EDIL3
SE_02_114900071 chr5:84374679-84394574 Sample_02_1149 Kidney WT 9-12_control_Nrf2_SFN 71 5 444 4 1 92 210 EDIL3
SE_02_015000593 chr5:84377756-84395144 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 593 2 380 4 1 84 210 EDIL3
SE_02_158400709 chr5:84378108-84405409 Sample_02_1584 Brain U87 GBM_Mock 709 6 592 8 1 93 210 EDIL3
SE_02_108500555 chr5:84378122-84404572 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 555 9 576 8 1 92 210 EDIL3
SE_02_155400842 chr5:84378248-84388431 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 842 3 220 2 1 63 210 EDIL3
SE_02_113901027 chr5:84378416-84405141 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 1027 8 580 8 1 93 210 EDIL3
SE_02_114800076 chr5:84378703-84385815 Sample_02_1148 Kidney WT 9-12_control_vehicle 76 2 155 0 1 57 210 EDIL3
SE_02_156000673 chr5:84381598-84408644 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 673 12 586 9 2 101 210 EDIL3
SE_02_102500867 chr5:84381618-84405128 Sample_02_1025 Esophagus KYSE150 867 5 513 7 1 85 210 EDIL3
SE_01_011200483 chr5:84381647-84385358 Sample_01_0112 Embryonic kidney HEK293_encode 483 1 90 0 1 41 210 EDIL3
SE_01_010200395 chr5:84381801-84394503 Sample_01_0102 Artery tibial artery 395 2 283 3 1 56 210 EDIL3
SE_02_126800887 chr5:84382105-84385788 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 887 1 86 0 1 30 210 EDIL3
SE_02_113600827 chr5:84433660-84439917 Sample_02_1136 Bone U2OS-anaphase/telophase 827 2 156 0 0 3 0 EDIL3
SE_02_121301037 chr5:84556292-84580769 Sample_02_1213 Brain GBM31 1037 10 603 4 0 69 0 EDIL3
SE_02_120300994 chr5:84556370-84580497 Sample_02_1203 Brain NB1 994 7 594 4 0 69 0 EDIL3
SE_02_086000684 chr5:84595872-84605110 Sample_02_0860 iPSCs SAH_SMARCB1_K364del/+ 684 7 214 0 0 6 0 EDIL3
SE_02_157000862 chr5:84595980-84604938 Sample_02_1570 iPSCs EiPSC 862 3 208 0 0 6 0 EDIL3
SE_02_006600332 chr5:84596327-84605337 Sample_02_0066 Embryo AzL-S_phase 332 2 209 0 0 7 0 EDIL3
SE_02_156700995 chr5:84596462-84604757 Sample_02_1567 iPSCs CiPSC 995 2 194 0 0 5 0 EDIL3
SE_02_086100325 chr5:84596490-84605031 Sample_02_0861 iPSCs SAH_WT 325 5 202 0 0 6 0 EDIL3
SE_02_157201157 chr5:84596565-84605008 Sample_02_1572 iPSCs FiPSC 1157 2 201 0 0 6 0 EDIL3
SE_00_001300472 chr5:84597249-84604429 Sample_00_0013 Embryo H9 472 3 167 0 0 5 0 EDIL3
SE_02_043900911 chr5:85179335-85196920 Sample_02_0439 Bone Hu09 911 14 472 2 5 0 0 EDIL3
Genomic distribution of SEs associated with EDIL3
Genome Browser

The strength of the tissue affected by the gene

Expression of EDIL3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)