SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000105821
Gene: DNAJC2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr7:103312289-103344830 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_103601733 chr7:103300741-103376156 Sample_02_1036 Mammary gland HCC70_XY018 1733 22 1863 145 1 188 1984 SLC26A5,DNAJC2,PSMC2,PMPCB,DPY19L2P2
SE_02_104902108 chr7:103300802-103364646 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 2108 24 1571 115 1 150 1732 PSMC2,DNAJC2,SLC26A5,PMPCB,DPY19L2P2
SE_02_103501919 chr7:103308401-103352672 Sample_02_1035 Mammary gland HCC70_Vehicle 1919 11 1105 88 1 110 1301 DNAJC2,PSMC2,PMPCB,DPY19L2P2
SE_02_122900918 chr7:103314324-103352031 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 918 14 947 74 1 88 1012 DNAJC2,PSMC2,PMPCB,DPY19L2P2
SE_02_070900608 chr7:103324288-103327589 Sample_02_0709 Pancreas hT85_organoid 608 1 77 3 0 9 98 DNAJC2,DPY19L2P2,PMPCB,PSMC2
SE_02_055400218 chr7:103340672-103351441 Sample_02_0554 Other Aska shSSX 218 4 248 20 1 45 263 DNAJC2,PSMC2,PMPCB
SE_02_054900107 chr7:103341446-103350149 Sample_02_0549 Other Aska shCt 107 2 205 15 1 45 263 DNAJC2,PSMC2,PMPCB
Genomic distribution of SEs associated with DNAJC2
Genome Browser

The strength of the tissue affected by the gene

Expression of DNAJC2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)