SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000051523
Gene: CYBA Gene type: protein_coding
Strand: - External links:
Genomic region: chr16:88643289-88651054 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_072900397 chr16:88633276-88658476 Sample_02_0729 Lymphoma I10_Mantle cell lymphoma tissue_THZ1 397 7 1198 80 3 87 3464 MVD,IL17C,CYBA,RNF166,CTU2,SNAI3-AS1,SNAI3
SE_02_010600390 chr16:88633662-88657954 Sample_02_0106 Skin NHEK_M 390 4 1158 78 3 83 3396 CYBA,IL17C,MVD,RNF166,SNAI3,MGC23284,CTU2
SE_02_072800589 chr16:88633709-88658403 Sample_02_0728 Lymphoma I10_Mantle cell lymphoma tissue_DMSO 589 6 1175 79 3 87 3463 MVD,IL17C,CYBA,RNF166,CTU2,SNAI3-AS1,SNAI3
SE_02_087300462 chr16:88647570-88655345 Sample_02_0873 Colon HCT116_siGLIS2.1-5FU 462 3 378 27 2 27 1322 MVD,CYBA,IL17C,RNF166,SNAI3-AS1,SNAI3
SE_02_125800889 chr16:88648005-88654800 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 889 2 352 26 1 20 1169 MVD,CYBA,IL17C,RNF166,SNAI3-AS1,SNAI3
SE_02_104900962 chr16:88648661-88655937 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 962 1 378 27 2 31 1339 MVD,CYBA,IL17C,RNF166,SNAI3-AS1,SNAI3
SE_02_122401086 chr16:88648665-88653347 Sample_02_1224 Bone marrow normal plasma cell 1086 1 251 14 1 12 958 MVD,CYBA,IL17C,SNAI3-AS1,SNAI3
SE_02_104701419 chr16:88648978-88653502 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1419 1 251 16 1 16 943 MVD,CYBA,IL17C,SNAI3-AS1,SNAI3
SE_02_001500521 chr16:88649116-88659661 Sample_02_0015 Liver HepG2_shNS 521 2 527 40 2 57 1916 CYBA,MVD,RNF166,SNAI3,MGC23284,IL17C,CTU2
SE_02_028600560 chr16:88649245-88654218 Sample_02_0286 Liver HuH7_IL-1alpha_1h 560 1 247 19 1 16 924 CYBA,MVD,SNAI3,MGC23284,IL17C,RNF166
SE_00_002700611 chr16:88649348-88656194 Sample_00_0027 Blood natural-killer-cell 611 1 341 24 2 32 1293 CYBA,MVD,SNAI3,MGC23284,IL17C,RNF166
SE_02_001400335 chr16:88649498-88653198 Sample_02_0014 Liver HepG2_shBRG1 335 1 181 10 1 10 774 CYBA,MVD,IL17C,MGC23284,SNAI3
Genomic distribution of SEs associated with CYBA
Genome Browser

The strength of the tissue affected by the gene

Expression of CYBA

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)