SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000138767
Gene: CNOT6L Gene type: protein_coding
Strand: - External links:
Genomic region: chr4:77713387-77819615 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_141300671 chr4:77695122-77703982 Sample_02_1413 Muscle RH4_sgBRG1 671 2 190 3 0 29 0 CNOT6L
SE_02_084000602 chr4:77695243-77714184 Sample_02_0840 Embryo hNPCs_R1159Q/+ 602 6 425 17 1 67 64 CNOT6L
SE_02_023400256 chr4:77712054-77828836 Sample_02_0234 Tonsil Th17 256 29 2654 186 6 394 1067 CNOT6L,MRPL1
SE_02_104900282 chr4:77722274-77877172 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 282 71 3624 281 10 328 610 MRPL1,CNOT6L
SE_02_104700514 chr4:77757667-77888470 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 514 33 3190 257 9 263 457 MRPL1,CNOT6L
SE_02_143100343 chr4:77770081-77828054 Sample_02_1431 Blood T cell 343 13 1387 108 5 148 244 CNOT6L,MRPL1
SE_02_104301531 chr4:77772252-77824387 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1531 19 1252 96 2 144 244 CNOT6L,MRPL1
SE_02_023300264 chr4:77776431-77828575 Sample_02_0233 Tonsil Th1 264 15 1268 99 5 122 148 CNOT6L,MRPL1
SE_02_023200551 chr4:77776645-77828130 Sample_02_0232 Tonsil ILC3 551 11 1253 98 4 115 140 CNOT6L,MRPL1
SE_02_040700150 chr4:77785236-77869943 Sample_02_0407 Brain BT16 150 11 2060 182 8 169 224 MRPL1,CNOT6L
SE_02_098901453 chr4:77796148-77821871 Sample_02_0989 Kidney kidney cortex_WT 1453 10 664 53 1 99 140 CNOT6L,MRPL1
SE_00_000900389 chr4:77797251-77829573 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 389 5 814 64 5 112 140 CNOT6L,MRPL1
SE_00_004400490 chr4:77799975-77828976 Sample_00_0044 Cord blood T-cell 490 4 747 59 4 107 140 CNOT6L,MRPL1
SE_02_023100293 chr4:77800168-77828288 Sample_02_0231 Tonsil ILC1 293 7 728 57 4 105 140 CNOT6L,MRPL1
SE_01_002000703 chr4:77800269-77828562 Sample_01_0020 Blood B-cell 703 5 732 57 4 105 140 CNOT6L,MRPL1
SE_02_003100686 chr4:77800420-77829480 Sample_02_0031 Haematopoietic and lymphoid tissue blood Jurkat 686 3 747 58 5 112 140 CNOT6L,MRPL1
SE_02_057400038 chr4:77800970-77864800 Sample_02_0574 Blood MOLM-13_sgNeg2 38 16 1556 139 8 169 224 MRPL1,CNOT6L
SE_02_057500054 chr4:77800997-77864861 Sample_02_0575 Blood MOLM13_sgLKB1e2 54 20 1557 139 8 169 224 MRPL1,CNOT6L
SE_02_058200052 chr4:77801236-77864981 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 52 11 1549 138 8 168 224 MRPL1,CNOT6L
SE_02_057700052 chr4:77801296-77865216 Sample_02_0577 Blood MOLM13_empty 52 14 1556 138 8 168 224 MRPL1,CNOT6L
SE_02_058100052 chr4:77812760-77864631 Sample_02_0581 Blood MOLM13_empty_HG 52 13 1214 113 8 154 224 MRPL1,CNOT6L
SE_02_122300370 chr4:77812915-77823366 Sample_02_1223 Bone marrow KMS28BM 370 2 259 20 1 87 140 CNOT6L,MRPL1
SE_02_033400177 chr4:77813588-77865103 Sample_02_0334 Haematopoietic and lymphoid tissue MOLM14_CA25_11 177 5 1210 111 8 154 224 MRPL1,CNOT6L
SE_02_109800196 chr4:77813793-77861778 Sample_02_1098 Blood THP1_DMSO_noPMA 196 17 1132 103 8 152 140 CNOT6L,MRPL1
SE_01_004200321 chr4:77813804-77822959 Sample_01_0042 Haematopoietic and lymphoid tissue KMS-11 321 1 223 17 1 87 140 CNOT6L,MRPL1
SE_02_099400065 chr4:77813943-77865586 Sample_02_0994 Blood MOLM13_SIK3TQ 65 30 1216 111 8 154 224 MRPL1,CNOT6L
SE_02_099500063 chr4:77813957-77864907 Sample_02_0995 Blood MOLM-13_empty vector 63 29 1192 110 8 154 224 MRPL1,CNOT6L
SE_02_057800057 chr4:77814042-77864459 Sample_02_0578 Blood MOLM-13_sgSIK3e4 57 21 1180 109 8 154 224 MRPL1,CNOT6L
SE_02_033200130 chr4:77814218-77865050 Sample_02_0332 Haematopoietic and lymphoid tissue MOLM14_DMSO_9 130 7 1187 110 8 154 224 MRPL1,CNOT6L
SE_02_032600979 chr4:77814278-77822031 Sample_02_0326 Liver hepatocytes_d3 979 1 190 14 1 86 140 CNOT6L,MRPL1
SE_02_122400750 chr4:77814382-77827371 Sample_02_1224 Bone marrow normal plasma cell 750 2 306 21 1 88 140 CNOT6L,MRPL1
SE_02_081700383 chr4:77814561-77827435 Sample_02_0817 Ovary Epithelial ovarian cancer 383 2 300 20 1 88 140 CNOT6L,MRPL1
SE_00_004500155 chr4:77814668-77828916 Sample_00_0045 Thymus thymus 155 2 338 25 4 89 140 CNOT6L,MRPL1
SE_02_122100324 chr4:77814694-77821967 Sample_02_1221 Bone marrow KMS11 324 2 180 13 1 82 140 CNOT6L,MRPL1
SE_02_122200208 chr4:77814764-77823933 Sample_02_1222 Bone marrow KMS12 208 3 220 15 1 85 140 CNOT6L,MRPL1
SE_02_082601685 chr4:77814998-77828610 Sample_02_0826 Stomach gastric tumor 1685 7 321 21 4 88 140 CNOT6L,MRPL1
SE_00_002001395 chr4:77815098-77821693 Sample_00_0020 Large intestine large-intestine_108d 1395 1 164 9 1 82 140 CNOT6L,MRPL1
SE_01_008200849 chr4:77815133-77823058 Sample_01_0082 Right lobe of liver right-lobe-of-liver 849 2 188 13 1 85 140 CNOT6L,MRPL1
SE_01_008501165 chr4:77815183-77823160 Sample_01_0085 Stomach stomach 1165 1 192 13 1 85 140 CNOT6L,MRPL1
SE_02_122000634 chr4:77815249-77822189 Sample_02_1220 Bone marrow JJN3 634 4 171 11 1 83 140 CNOT6L,MRPL1
SE_02_012700510 chr4:77815254-77864199 Sample_02_0127 Blood Induced-regulatory-T-cells_CPI-703 510 8 1144 105 8 151 224 MRPL1,CNOT6L
SE_02_013100465 chr4:77815254-77864199 Sample_02_0131 Lung 1015_PT 465 8 1144 105 8 151 224 MRPL1,CNOT6L
SE_02_121800642 chr4:77815296-77827961 Sample_02_1218 Bone marrow Daudi 642 5 298 21 4 85 140 CNOT6L,MRPL1
SE_02_156001338 chr4:77815339-77822962 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 1338 4 181 13 1 83 140 CNOT6L,MRPL1
SE_01_010100817 chr4:77815418-77821666 Sample_01_0101 Pancreas pancreas_54y 817 3 157 9 1 79 140 CNOT6L,MRPL1
SE_02_157300858 chr4:77815507-77827846 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 858 5 291 19 3 82 140 CNOT6L,MRPL1
SE_02_099300066 chr4:77815556-77865698 Sample_02_0993 Blood MOLM-13_empty 66 28 1174 107 8 146 224 MRPL1,CNOT6L
SE_00_005601033 chr4:77815587-77822794 Sample_00_0056 Sigmoid colon sigmoid colon 3y 1033 4 169 13 1 79 140 CNOT6L,MRPL1
SE_02_033300124 chr4:77815973-77864962 Sample_02_0333 Haematopoietic and lymphoid tissue MOLM14_DMSO_10 124 9 1136 106 8 146 224 MRPL1,CNOT6L
SE_01_010300488 chr4:77816105-77822006 Sample_01_0103 Pancreas pancreas_37y 488 1 140 10 1 76 140 CNOT6L,MRPL1
SE_02_033500156 chr4:77816376-77864453 Sample_02_0335 Haematopoietic and lymphoid tissue MOLM14_CA25_12 156 9 1115 105 8 142 224 MRPL1,CNOT6L
SE_00_003601083 chr4:77816399-77822011 Sample_00_0036 Small intestine small-intestine_108days 1083 1 135 10 1 74 140 CNOT6L,MRPL1
SE_00_000700374 chr4:77816464-77829227 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 374 2 293 22 4 85 140 CNOT6L,MRPL1
SE_02_033100113 chr4:77816588-77864885 Sample_02_0331 Haematopoietic and lymphoid tissue MOLM14_untreated 113 9 1121 106 8 142 224 MRPL1,CNOT6L
SE_02_133100215 chr4:77816612-77860526 Sample_02_1331 Blood Molm13_CTRL 215 15 1035 97 8 139 140 CNOT6L,MRPL1
SE_01_007900495 chr4:77816668-77823024 Sample_01_0079 Peyers patch Peyers-patch 495 1 149 13 1 75 140 CNOT6L,MRPL1
SE_01_010900918 chr4:77816687-77821744 Sample_01_0109 Colon transverse colon_54y 918 2 125 9 1 72 140 CNOT6L,MRPL1
SE_02_061700924 chr4:77816765-77822306 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 924 1 133 12 1 75 140 CNOT6L,MRPL1
SE_00_000800596 chr4:77816824-77823495 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 596 1 161 12 1 75 140 CNOT6L,MRPL1
SE_02_103400628 chr4:77817083-77822761 Sample_02_1034 Blood AML cell 628 1 131 11 1 75 140 CNOT6L,MRPL1
SE_02_025500159 chr4:77817192-77860407 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 159 11 1021 95 8 139 140 CNOT6L,MRPL1
SE_00_002700658 chr4:77817202-77828953 Sample_00_0027 Blood natural-killer-cell 658 2 275 20 4 79 140 CNOT6L,MRPL1
SE_02_028400682 chr4:77817232-77822204 Sample_02_0284 Pelvis patient 119 682 1 121 9 1 74 140 CNOT6L,MRPL1
SE_01_007500902 chr4:77817232-77822682 Sample_01_0075 Esophagus squamous epithelium esophagus-squamous-epithelium 902 1 126 10 1 75 140 CNOT6L,MRPL1
SE_01_009200827 chr4:77817287-77822430 Sample_01_0092 Vagina vagina 827 1 122 10 1 75 140 CNOT6L,MRPL1
SE_02_067201352 chr4:77817292-77822060 Sample_02_0672 Endometrium endometrium cancer_DSG 1352 2 118 9 1 74 140 CNOT6L,MRPL1
SE_02_081901089 chr4:77817310-77821260 Sample_02_0819 Ovary Mucinous ovarian cancer 1089 1 105 7 1 70 140 CNOT6L,MRPL1
SE_01_010701000 chr4:77817315-77834025 Sample_01_0107 Esophagus esophagus squamous epithelium 1000 3 384 30 5 101 140 CNOT6L,MRPL1
SE_00_004100958 chr4:77817331-77821757 Sample_00_0041 Stomach stomach_3y 958 1 111 7 1 72 140 CNOT6L,MRPL1
SE_01_008400358 chr4:77817332-77829037 Sample_01_0084 Spleen spleen 358 2 275 20 4 82 140 CNOT6L,MRPL1
SE_00_003900201 chr4:77817335-77828325 Sample_00_0039 Spleen spleen_3y 201 2 258 19 4 78 140 CNOT6L,MRPL1
SE_01_009900492 chr4:77817337-77822588 Sample_01_0099 Colon transverse colon 492 3 124 10 1 75 140 CNOT6L,MRPL1
SE_02_013200508 chr4:77817342-77864189 Sample_02_0132 Lung 1015_CL 508 7 1093 103 8 142 224 MRPL1,CNOT6L
SE_02_020600295 chr4:77817356-77822583 Sample_02_0206 Stomach Gastric_Primary_Sample_N 295 3 123 10 1 75 140 CNOT6L,MRPL1
SE_02_075100624 chr4:77817383-77828110 Sample_02_0751 Lymphoma Rec-1_WO 624 5 252 19 4 77 140 CNOT6L,MRPL1
SE_00_004900599 chr4:77817400-77822117 Sample_00_0049 Small intestine small intestine 30y 599 2 115 9 1 71 140 CNOT6L,MRPL1
SE_00_001100934 chr4:77817411-77822286 Sample_00_0011 Esophagus esophagus 934 1 118 10 1 72 140 CNOT6L,MRPL1
SE_02_064500748 chr4:77817417-77833934 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 748 2 378 30 5 98 140 CNOT6L,MRPL1
SE_02_081600638 chr4:77817420-77822770 Sample_02_0816 Ovary Clear cell ovarian cancer 638 2 125 11 1 72 140 CNOT6L,MRPL1
SE_02_075000794 chr4:77817421-77827368 Sample_02_0750 Lymphoma Rec-1_GSI 794 2 230 15 1 73 140 CNOT6L,MRPL1
SE_02_064800757 chr4:77817458-77845933 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 757 4 647 59 7 116 140 CNOT6L,MRPL1
SE_02_059300147 chr4:77817500-77827808 Sample_02_0593 Fetal spleenocytes fetal naive T cells 147 3 241 16 2 73 140 CNOT6L,MRPL1
SE_01_010400617 chr4:77817507-77822809 Sample_01_0104 Lung upper lobe of left lung 617 2 124 11 1 72 140 CNOT6L,MRPL1,CCNI,FRAS1
SE_02_028800378 chr4:77817530-77828506 Sample_02_0288 Tonsil CB5_H3K27Ac 378 2 256 19 4 75 140 CNOT6L,MRPL1
SE_00_002201191 chr4:77817540-77821706 Sample_00_0022 Lung lung_30y 1191 1 103 7 1 69 140 CNOT6L,MRPL1
SE_00_003500693 chr4:77817547-77821703 Sample_00_0035 Sigmoid colon sigmoid-colon 693 1 103 7 1 69 140 CNOT6L,MRPL1
SE_00_004700463 chr4:77817554-77822708 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 463 1 120 9 1 72 140 CNOT6L,MRPL1
SE_02_002600411 chr4:77817579-77828170 Sample_02_0026 Blood CD4donorE 411 3 249 18 4 75 140 CNOT6L,MRPL1
SE_00_004000302 chr4:77817615-77822323 Sample_00_0040 Spleen spleen_30y 302 1 114 9 1 72 140 CNOT6L,MRPL1
SE_02_002200391 chr4:77817623-77828673 Sample_02_0022 Blood CD8donorA 391 4 258 18 4 75 140 CNOT6L,MRPL1
SE_00_005500411 chr4:77817625-77822687 Sample_00_0055 Spleen spleen 34y 411 3 118 9 1 72 140 CNOT6L,MRPL1
SE_02_065000668 chr4:77817709-77833610 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 668 2 367 29 5 98 140 CNOT6L,MRPL1
SE_02_083501195 chr4:77817711-77821589 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 1195 1 100 6 1 69 140 CNOT6L,MRPL1
SE_02_014800403 chr4:77817922-77827648 Sample_02_0148 Blood CD8_T_cells 403 3 229 15 2 73 140 CNOT6L,MRPL1
SE_02_059100436 chr4:77818142-77823461 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 436 2 130 10 1 71 140 CNOT6L,MRPL1
SE_02_048900296 chr4:77818234-77821695 Sample_02_0489 Bone marrow HSCe_23y_F_CD34+,CD38-,Lineage- 296 1 90 6 1 66 140 CNOT6L,MRPL1
SE_02_048200282 chr4:77818787-77822069 Sample_02_0482 Bone marrow HSCe_18y_CD34+,CD38-,Lineage-_ 282 1 83 7 1 54 140 CNOT6L,MRPL1
Genomic distribution of SEs associated with CNOT6L
Genome Browser

The strength of the tissue affected by the gene

Expression of CNOT6L

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)