Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000234469 |
| Gene: | CLDN34 | Gene type: | protein_coding |
| Strand: | + | External links: |
|
| Genomic region: | chrX:9967358-9968352 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_123701090 | chrX:9875276-9883419 |
Sample_02_1237 | Skin | MKL2_virus_positive | 1090 | 6 | 180 | 14 | 0 | 11 | 0 | SHROOM2,CLDN34 |
| SE_02_141000644 | chrX:9885446-9949368 |
Sample_02_1410 | Brain | GSC6 | 644 | 14 | 1683 | 80 | 2 | 165 | 1878 | SHROOM2,CLDN34,WWC3 |
| SE_02_119601105 | chrX:9888025-9949263 |
Sample_02_1196 | Brain | GBM32 | 1105 | 20 | 1629 | 78 | 2 | 165 | 1859 | SHROOM2,CLDN34,WWC3 |
| SE_02_059400716 | chrX:9895145-9942402 |
Sample_02_0594 | iPSC-derived | neural progenitors | 716 | 14 | 1267 | 57 | 2 | 120 | 1120 | SHROOM2,CLDN34,WWC3 |
| SE_02_120200719 | chrX:9895363-9941390 |
Sample_02_1202 | Brain | GBM38 | 719 | 21 | 1218 | 57 | 1 | 117 | 1066 | SHROOM2,CLDN34,WWC3 |
| SE_02_096300205 | chrX:9896624-9942270 |
Sample_02_0963 | Brain | H3.3K27M_Tumor-derived cell-line_G477p6_cells | 205 | 11 | 1208 | 57 | 2 | 108 | 779 | SHROOM2,CLDN34,WWC3 |
| SE_02_085400077 | chrX:9896856-9949445 |
Sample_02_0854 | Glioblastoma | Glioblastoma neurosphere cell_HF-2354 | 77 | 11 | 1384 | 70 | 2 | 133 | 1199 | SHROOM2,CLDN34,WWC3 |
| SE_02_085700390 | chrX:9897108-9949488 |
Sample_02_0857 | Glioblastoma | Glioblastoma neurosphere cell_HF-3035 | 390 | 15 | 1382 | 70 | 2 | 132 | 1200 | SHROOM2,CLDN34,WWC3 |
| SE_02_043900627 | chrX:9897248-9903903 |
Sample_02_0439 | Bone | Hu09 | 627 | 4 | 178 | 9 | 0 | 34 | 77 | SHROOM2,CLDN34 |
| SE_02_119300920 | chrX:9897321-9949374 |
Sample_02_1193 | Brain | GBM27 | 920 | 14 | 1379 | 70 | 2 | 127 | 1195 | SHROOM2,CLDN34,WWC3 |
| SE_02_114900362 | chrX:9897441-9912958 |
Sample_02_1149 | Kidney | WT 9-12_control_Nrf2_SFN | 362 | 6 | 403 | 22 | 0 | 58 | 182 | SHROOM2,CLDN34,WWC3 |
| SE_02_096800141 | chrX:9897456-9942787 |
Sample_02_0968 | Brain | H3.3K27M_pcGBM2p18_cells | 141 | 13 | 1210 | 58 | 2 | 106 | 738 | SHROOM2,CLDN34,WWC3 |
| SE_02_095300543 | chrX:9897528-9949242 |
Sample_02_0953 | Brain | H3.3K27M_1840 | 543 | 23 | 1373 | 70 | 2 | 127 | 1171 | SHROOM2,CLDN34,WWC3 |
| SE_02_118700564 | chrX:9897636-9942413 |
Sample_02_1187 | Brain | GBM16 | 564 | 20 | 1197 | 57 | 2 | 106 | 738 | SHROOM2,CLDN34,WWC3 |
| SE_02_079500261 | chrX:9897747-9913170 |
Sample_02_0795 | Brain | 1953 | 261 | 9 | 411 | 22 | 0 | 59 | 215 | SHROOM2,CLDN34,WWC3 |
| SE_02_119700652 | chrX:9897949-9949335 |
Sample_02_1197 | Brain | GBM33 | 652 | 31 | 1370 | 70 | 2 | 125 | 1191 | SHROOM2,CLDN34,WWC3 |
| SE_02_079300308 | chrX:9898049-9913193 |
Sample_02_0793 | Brain | MES20 | 308 | 7 | 404 | 21 | 0 | 57 | 209 | SHROOM2,CLDN34,WWC3 |
| SE_02_083800531 | chrX:9899166-9913507 |
Sample_02_0838 | Embryo | hNPCs_WT | 531 | 2 | 376 | 19 | 0 | 50 | 154 | SHROOM2,CLDN34,WWC3 |
| SE_02_092700633 | chrX:9977650-9996510 |
Sample_02_0927 | Peripheral blood | neutrophils_US | 633 | 8 | 463 | 12 | 0 | 0 | 0 | CLDN34,WWC3 |
Genomic distribution of SEs associated with CLDN34