SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000074054
Gene: CLASP1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr2:121337776-121649476 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_009700290 chr2:121561836-121650999 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 290 27 2359 229 3 106 401 CLASP1,NIFK-AS1,RNU4ATAC
SE_02_122900546 chr2:121591544-121653421 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 546 25 1625 173 3 89 457 CLASP1,NIFK-AS1,MKI67IP,TSN
SE_02_098901110 chr2:121594451-121651115 Sample_02_0989 Kidney kidney cortex_WT 1110 19 1478 150 3 89 414 CLASP1,NIFK-AS1
SE_02_091200625 chr2:121594696-121650908 Sample_02_0912 Heart left ventricle_DCM_LV1300 625 15 1460 148 3 89 393 CLASP1,NIFK-AS1
SE_00_000300828 chr2:121594710-121645759 Sample_00_0003 Adrenal gland adrenal-gland_97d 828 8 1338 138 3 53 77 CLASP1
SE_02_091300707 chr2:121594784-121668247 Sample_02_0913 Heart left ventricle_DCM_LV1304 707 19 1873 197 4 95 457 CLASP1,NIFK-AS1
SE_02_089200552 chr2:121594803-121651027 Sample_02_0892 Heart left ventricle_LV1215 552 26 1459 148 3 89 405 CLASP1,NIFK-AS1
SE_02_088900583 chr2:121594905-121650848 Sample_02_0889 Heart left ventricle_LV1183 583 22 1455 147 3 89 387 CLASP1,NIFK-AS1
SE_02_095600192 chr2:121594944-121651086 Sample_02_0956 Brain IDH1_2658 192 12 1457 145 3 89 412 CLASP1,NIFK-AS1
SE_02_088700548 chr2:121594960-121650914 Sample_02_0887 Heart left ventricle_LV1121 548 14 1455 145 3 89 393 CLASP1,NIFK-AS1
SE_02_090800656 chr2:121595032-121668020 Sample_02_0908 Heart left ventricle_DCM_LV1262 656 26 1864 194 4 95 457 CLASP1,NIFK-AS1
SE_01_009800934 chr2:121595033-121650890 Sample_01_0098 Heart left ventricle_51y 934 12 1452 145 3 89 389 CLASP1,NIFK-AS1
SE_02_089600642 chr2:121595078-121650988 Sample_02_0896 Heart left ventricle_LV1294 642 22 1452 145 3 89 401 CLASP1,NIFK-AS1
SE_02_147800218 chr2:121595088-121627741 Sample_02_1478 Bone EW-3 218 8 842 84 1 36 77 CLASP1,NIFK-AS1
SE_02_091000626 chr2:121595112-121651083 Sample_02_0910 Heart left ventricle_DCM_LV1275 626 19 1450 145 3 89 412 CLASP1,NIFK-AS1
SE_02_090200655 chr2:121595170-121650727 Sample_02_0902 Heart left ventricle_LV1558 655 17 1444 145 3 89 363 CLASP1,NIFK-AS1
SE_02_090000620 chr2:121595305-121650790 Sample_02_0900 Heart left ventricle_LV1452 620 23 1444 145 3 89 375 CLASP1,NIFK-AS1
SE_02_089300627 chr2:121595313-121650673 Sample_02_0893 Heart left ventricle_LV1226 627 12 1441 145 3 89 359 CLASP1,NIFK-AS1
SE_02_089100657 chr2:121595610-121650888 Sample_02_0891 Heart left ventricle_LV1202 657 19 1440 144 3 86 388 CLASP1,NIFK-AS1
SE_02_091900918 chr2:121613011-121650905 Sample_02_0919 Heart left ventricle_DCM_LV1532 918 10 973 101 2 56 315 CLASP1,NIFK-AS1
SE_02_039900196 chr2:121624414-121651355 Sample_02_0399 Mammary gland SUM159PT-BT-474 196 8 714 70 2 56 350 CLASP1
SE_02_081500311 chr2:121625366-121651125 Sample_02_0815 Mammary gland SUM159PT 311 5 687 67 2 56 337 CLASP1,NIFK-AS1
SE_02_011100637 chr2:121625567-121651495 Sample_02_0111 Ovaries IOE4 637 3 689 66 2 56 362 CLASP1
SE_02_040200477 chr2:121625602-121651902 Sample_02_0402 Mammary gland SUM159PT-ZR-75-1 477 3 700 67 2 56 380 CLASP1
SE_02_053000624 chr2:121625616-121645966 Sample_02_0530 Mammary gland MCF10A 624 11 556 56 2 20 0 CLASP1,NIFK-AS1
SE_02_105700507 chr2:121625835-121651959 Sample_02_1057 Esophagus GihTRT 507 4 693 68 2 56 380 CLASP1,NIFK-AS1
SE_02_089700794 chr2:121626154-121650855 Sample_02_0897 Heart left ventricle_LV1325 794 7 653 65 2 56 310 CLASP1,NIFK-AS1
SE_02_151600673 chr2:121626171-121648611 Sample_02_1516 Non-transformed mammary epithelial IMEC MYC 673 6 602 61 2 29 0 CLASP1,NIFK-AS1
SE_02_094100414 chr2:121626741-121637884 Sample_02_0941 Brain T98G 414 6 296 31 1 11 0 CLASP1,NIFK-AS1
SE_02_090401220 chr2:121626753-121668258 Sample_02_0904 Heart left ventricle_DCM_LV1028 1220 12 1050 112 3 59 380 CLASP1,NIFK-AS1
SE_02_090701439 chr2:121626887-121650898 Sample_02_0907 Heart left ventricle_DCM_LV1223 1439 9 633 63 2 53 312 CLASP1,NIFK-AS1
SE_02_088601424 chr2:121629410-121663810 Sample_02_0886 Skin foreskin_ p63KLF4 1424 7 885 94 3 57 380 CLASP1,NIFK-AS1
SE_02_031600631 chr2:121631992-121651298 Sample_02_0316 Neuroblastoma CHP212 631 2 497 51 2 53 343 CLASP1
SE_02_057100515 chr2:121632136-121642353 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 515 5 272 31 1 14 0 CLASP1,NIFK-AS1
SE_02_057200344 chr2:121632605-121645872 Sample_02_0572 Brain LN229_1_mM_glucose 344 6 356 41 2 15 0 CLASP1,NIFK-AS1
SE_02_057000861 chr2:121632675-121641637 Sample_02_0570 Brain LN229_10_mM_glucose 861 5 239 28 1 12 0 CLASP1,NIFK-AS1
SE_02_076000893 chr2:121633380-121658909 Sample_02_0760 Ovary BIN-67_SMARCA4 893 3 659 72 2 51 380 CLASP1,NIFK-AS1
SE_02_058001115 chr2:121635834-121653082 Sample_02_0580 Blood HEL_sgSIK3e4 1115 5 436 45 1 42 380 CLASP1,NIFK-AS1
SE_02_057601003 chr2:121640823-121653073 Sample_02_0576 Blood HEL_sgLKB1e2 1003 3 299 33 1 42 380 CLASP1,NIFK-AS1
SE_02_057900999 chr2:121641035-121653668 Sample_02_0579 Blood HEL_sgNeg2 999 4 306 34 1 42 380 CLASP1,NIFK-AS1
SE_02_064501075 chr2:121647459-121650916 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1075 1 78 7 0 35 316 CLASP1,NIFK-AS1
Genomic distribution of SEs associated with CLASP1
Genome Browser

The strength of the tissue affected by the gene

Expression of CLASP1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)