SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000277972
Gene: CISD3 Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:38730341-38735605 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_021101335 chr17:38716559-38743171 Sample_02_0211 Lung MRC-5_NFD_1DPT 1335 4 829 52 0 219 3892 MLLT6,PCGF2,CISD3,PSMB3,C17ORF96
SE_02_033001009 chr17:38718257-38750923 Sample_02_0330 Endoderm MHG 1009 4 961 72 0 253 3775 MLLT6,PCGF2,CISD3,C17ORF96,PSMB3,PIP4K2B
SE_02_007900112 chr17:38718885-38752534 Sample_02_0079 Mammary gland T-47D_1 112 6 996 79 0 263 3752 MLLT6,PCGF2,CISD3,C17ORF96,PSMB3,PIP4K2B
SE_02_025000120 chr17:38721732-38750848 Sample_02_0250 Brain tumormodel3691 120 6 862 68 0 228 3190 MLLT6,PCGF2,CISD3,C17ORF96,PSMB3,PIP4K2B
SE_02_081000221 chr17:38721873-38750915 Sample_02_0810 Mammary gland T47D noSerum 221 8 858 68 0 224 3146 PCGF2,CISD3,MLLT6,C17ORF96,PIP4K2B,PSMB3,MIR4726,MIR4734
SE_02_110400221 chr17:38722827-38752621 Sample_02_1104 Brain NB-69 221 9 889 73 0 200 2973 PCGF2,CISD3,MLLT6,C17ORF96,PIP4K2B,PSMB3,MIR4726,MIR4734
SE_02_042100171 chr17:38723893-38752677 Sample_02_0421 Brain BE2C_3 171 5 861 71 0 200 2951 MLLT6,PCGF2,CISD3,C17ORF96,PSMB3,PIP4K2B
SE_02_034000203 chr17:38723909-38752672 Sample_02_0340 Brain BE2C_2 203 4 861 71 0 200 2949 MLLT6,PCGF2,CISD3,C17ORF96,PSMB3,PIP4K2B
SE_02_034100324 chr17:38723924-38752656 Sample_02_0341 Autonomic ganglia SH-SY5Y_untreat 324 5 860 71 0 200 2947 MLLT6,PCGF2,CISD3,C17ORF96,PSMB3,PIP4K2B
SE_00_002500282 chr17:38723986-38753594 Sample_00_0025 Muscle of leg muscle-of-leg 282 7 883 74 0 211 3124 MLLT6,PCGF2,CISD3,PSMB3,C17ORF96,PIP4K2B
SE_02_095600781 chr17:38724013-38750500 Sample_02_0956 Brain IDH1_2658 781 7 793 62 0 190 2868 PCGF2,CISD3,MLLT6,C17ORF96,PIP4K2B,PSMB3,MIR4726,MIR4734
SE_00_003800291 chr17:38724020-38753505 Sample_00_0038 Spinal cord spinal-cord_108d 291 5 880 74 0 211 3122 MLLT6,PCGF2,CISD3,PSMB3,C17ORF96,PIP4K2B
SE_00_002600398 chr17:38724052-38750832 Sample_00_0026 Muscle of trunk muscle-of-trunk 398 5 797 64 0 190 2868 MLLT6,PCGF2,CISD3,C17ORF96,PSMB3,PIP4K2B
SE_00_004300671 chr17:38724063-38751139 Sample_00_0043 Stomach stomach_96d 671 5 801 64 0 191 2868 MLLT6,PCGF2,CISD3,C17ORF96,PSMB3,PIP4K2B
SE_02_004700515 chr17:38724169-38754280 Sample_02_0047 Pancreatic endoderm IIDP/donor790 515 4 888 74 0 212 3124 MLLT6,PCGF2,CISD3,PSMB3,C17ORF96,PIP4K2B
SE_02_027500532 chr17:38724186-38751420 Sample_02_0275 Retina FW14 532 4 803 65 0 194 2868 MLLT6,PCGF2,CISD3,C17ORF96,PSMB3,PIP4K2B
SE_02_066300463 chr17:38724413-38751614 Sample_02_0663 Thyroid TT 463 9 796 64 0 195 2868 PCGF2,CISD3,MLLT6,C17ORF96,PIP4K2B,PSMB3,MIR4726,MIR4734
SE_00_002200563 chr17:38724460-38751203 Sample_00_0022 Lung lung_30y 563 9 784 64 0 194 2859 MLLT6,PCGF2,CISD3,C17ORF96,PSMB3,PIP4K2B
SE_00_002000656 chr17:38724460-38753609 Sample_00_0020 Large intestine large-intestine_108d 656 5 859 73 0 211 3115 MLLT6,PCGF2,CISD3,PSMB3,C17ORF96,PIP4K2B
SE_02_001900452 chr17:38724542-38750585 Sample_02_0019 Embryo Neural crest cells 452 6 770 61 0 190 2840 MLLT6,PCGF2,CISD3,C17ORF96,PSMB3,PIP4K2B
SE_00_003500234 chr17:38724583-38751178 Sample_00_0035 Sigmoid colon sigmoid-colon 234 8 783 64 0 194 2829 MLLT6,PCGF2,CISD3,C17ORF96,PSMB3,PIP4K2B
SE_00_003601244 chr17:38724714-38750629 Sample_00_0036 Small intestine small-intestine_108days 1244 6 767 62 0 184 2803 MLLT6,PCGF2,CISD3,C17ORF96,PSMB3,PIP4K2B
SE_02_023700840 chr17:38725270-38751563 Sample_02_0237 Colon V389 840 7 775 64 0 176 2699 MLLT6,PCGF2,CISD3,PIP4K2B,PSMB3
SE_01_007100386 chr17:38729566-38748339 Sample_01_0071 Pancreas body-of-pancreas 386 4 582 53 0 139 1795 MLLT6,PCGF2,CISD3,PSMB3
SE_00_004600967 chr17_KI270857v1_alt:2765127-2788603 Sample_00_0046 Heart right ventricle_34y 967 16 0 0 0 0 0 CISD3,PSMB3,PCGF2
Genomic distribution of SEs associated with CISD3
Genome Browser

The strength of the tissue affected by the gene

Expression of CISD3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)