SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000187288
Gene: CIDEC Gene type: protein_coding
Strand: - External links:
Genomic region: chr3:9866711-9880255 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_042300292 chr3:9840452-9884932 Sample_02_0423 Skin A375 292 16 1499 136 3 51 1291 CIDEC,RPUSD3,ARPC4,TTLL3,CRELD1,TADA3,IL17RE,IL17RC,JAGN1
SE_02_155100548 chr3:9845098-9883087 Sample_02_1551 Gastrointestinal Stromal MaMel 548 7 1296 118 3 35 802 CIDEC,IL17RC,RPUSD3,IL17RE,TTLL3,JAGN1
SE_02_018300402 chr3:9845921-9877428 Sample_02_0183 Skin SKMEL2 402 6 1117 105 3 21 548 CIDEC,TTLL3,RPUSD3,IL17RE,IL17RC,JAGN1
SE_02_093000979 chr3:9846120-9900189 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 979 26 1819 160 6 92 1135 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,TTLL3,PRRT3-AS1,CAMK1
SE_02_149300561 chr3:9846777-9876446 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 561 13 1056 96 3 15 441 CIDEC,IL17RC,RPUSD3,IL17RE,TTLL3,JAGN1
SE_02_107800505 chr3:9847199-9882874 Sample_02_1078 Muscle RMS235_PAX3-NCOA1 505 12 1215 107 3 35 802 CIDEC,IL17RC,RPUSD3,IL17RE,TTLL3,JAGN1
SE_02_057000496 chr3:9847274-9876571 Sample_02_0570 Brain LN229_10_mM_glucose 496 9 1041 94 3 15 441 CIDEC,IL17RC,RPUSD3,IL17RE,TTLL3,JAGN1
SE_02_066000332 chr3:9847302-9900039 Sample_02_0660 Mammary gland MCF10DCIS 332 10 1776 152 6 92 1135 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,TTLL3,PRRT3-AS1
SE_02_066100392 chr3:9848230-9899703 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 392 12 1718 150 6 92 1135 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,TTLL3,PRRT3-AS1
SE_02_046500067 chr3:9848630-9898828 Sample_02_0465 Adipose subcutaneous adipocytes 67 19 1670 145 6 90 1135 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,TTLL3,PRRT3-AS1
SE_02_046600181 chr3:9851382-9899144 Sample_02_0466 Adipose visceral adipocytes 181 28 1600 137 6 92 1135 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,TTLL3,PRRT3-AS1
SE_02_096100477 chr3:9858390-9865972 Sample_02_0961 Brain H3.3K27M_Tumor-derived cell-line_DIPGVI_c27_cells 477 4 293 20 0 0 0 CIDEC,RPUSD3,IL17RE,TTLL3,JAGN1
SE_03_000900344 chr3:9861160-9899984 Sample_03_0009 Lung A549_dexamethasone_3h 344 3 1259 92 5 92 1016 CIDEC,JAGN1,CRELD1,RPUSD3,IL17RE,IL17RC
SE_03_001400306 chr3:9861166-9899981 Sample_03_0014 Lung A549_dexamethasone_2h 306 7 1259 92 5 92 1016 CIDEC,JAGN1,CRELD1,RPUSD3,IL17RE,IL17RC
SE_03_001000421 chr3:9861191-9899995 Sample_03_0010 Lung A549_dexamethasone_1h 421 7 1259 92 5 92 1016 CIDEC,JAGN1,CRELD1,RPUSD3,IL17RE,IL17RC
SE_03_001600333 chr3:9861363-9900137 Sample_03_0016 Lung A549_dexamethasone_6h 333 6 1262 92 5 92 1016 CIDEC,JAGN1,CRELD1,RPUSD3,IL17RE,IL17RC
SE_03_000400335 chr3:9861387-9899984 Sample_03_0004 Lung A549_dexamethasone_4h 335 6 1252 92 5 92 1016 CIDEC,JAGN1,CRELD1,RPUSD3,IL17RE,IL17RC
SE_02_006800739 chr3:9861412-9877595 Sample_02_0068 Skin A375_DMSO 739 9 554 36 2 21 429 CIDEC,RPUSD3,IL17RE,IL17RC,JAGN1
SE_03_001300438 chr3:9861495-9899991 Sample_03_0013 Lung A549 438 5 1250 92 5 92 1016 CIDEC,JAGN1,CRELD1,RPUSD3,IL17RE,IL17RC
SE_03_001500305 chr3:9861602-9899971 Sample_03_0015 Lung A549_dexamethasone_8h 305 7 1242 91 5 92 1016 CIDEC,JAGN1,CRELD1,RPUSD3,IL17RE,IL17RC
SE_02_086800331 chr3:9861611-9898830 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 331 19 1192 87 5 90 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_116600855 chr3:9861667-9898712 Sample_02_1166 Biliary H69_TGF beta_16h_1 855 10 1179 87 5 89 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_105700444 chr3:9861864-9897934 Sample_02_1057 Esophagus GihTRT 444 6 1147 85 4 88 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_03_001100289 chr3:9861913-9892118 Sample_03_0011 Lung A549_dexamethasone_5h 289 4 946 63 2 53 822 CIDEC,JAGN1,CRELD1,RPUSD3,IL17RE,IL17RC
SE_03_000700310 chr3:9861983-9899997 Sample_03_0007 Lung A549_dexamethasone_12h 310 6 1228 92 5 92 1016 CIDEC,JAGN1,CRELD1,RPUSD3,IL17RE,IL17RC
SE_02_105600596 chr3:9862098-9897943 Sample_02_1056 Esophagus ChTRT 596 6 1137 85 4 88 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_03_000500494 chr3:9862209-9899371 Sample_03_0005 Lung A549_dexamethasone_0.5h 494 8 1191 88 5 92 1016 CIDEC,JAGN1,CRELD1,RPUSD3,IL17RE,IL17RC
SE_02_005700814 chr3:9862263-9899193 Sample_02_0057 Mammary gland vHMEC 814 9 1182 87 5 92 1016 CIDEC,JAGN1,CRELD1,RPUSD3,IL17RE,IL17RC
SE_02_150201088 chr3:9862371-9899416 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 1088 14 1184 87 5 92 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_131000842 chr3:9862380-9897496 Sample_02_1310 Bone marrow ASMSCs 842 6 1119 82 4 88 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_047500319 chr3:9862400-9899627 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 319 7 1190 89 5 92 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_076601190 chr3:9862410-9899805 Sample_02_0766 Ovary PEO1 1190 14 1193 89 5 92 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_047800700 chr3:9862420-9901119 Sample_02_0478 Colon normal colon mucosa 700 8 1246 94 5 92 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_071700229 chr3:9862578-9899827 Sample_02_0717 Pancreas HPAFII_GFP_DOX 229 9 1192 89 5 92 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_127600394 chr3:9862834-9899968 Sample_02_1276 Prostate PC3_GSK126 394 15 1197 89 5 92 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_102400300 chr3:9862922-9900066 Sample_02_1024 Prostate PC3 cells 300 10 1202 90 5 92 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_131100930 chr3:9862943-9897013 Sample_02_1311 Bone marrow HDMSCs 930 8 1078 81 4 88 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE
SE_02_053000631 chr3:9864151-9899945 Sample_02_0530 Mammary gland MCF10A 631 12 1143 84 5 92 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_059600537 chr3:9864192-9899814 Sample_02_0596 Mammary gland MCF10A_ DMSO 537 7 1131 84 5 92 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_152300452 chr3:9864244-9899791 Sample_02_1523 Lung A549 DMSO 452 7 1123 84 5 92 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_058900431 chr3:9864322-9899692 Sample_02_0589 Cervix HeLa Kyoto_Luci siRNA 431 9 1117 84 5 92 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_059000338 chr3:9864339-9899767 Sample_02_0590 Cervix HeLa Kyoto_Luci PWWP2A siRNA 338 7 1117 84 5 92 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_058800470 chr3:9864342-9899710 Sample_02_0588 Cervix HeLa Kyoto_untreated 470 9 1117 84 5 92 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_060000392 chr3:9864670-9899746 Sample_02_0600 Mammary gland MCF10A_p53shRNA_DMSO 392 7 1102 84 5 92 1016 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_072100350 chr3:9870901-9899399 Sample_02_0721 Pancreas HPAFII_TP63dN_DOX 350 6 861 67 3 77 694 CIDEC,JAGN1,CRELD1,IL17RC,RPUSD3,IL17RE,PRRT3-AS1
SE_02_020000121 chr3:9883545-9885413 Sample_02_0200 Stomach RERF-GC-1B 121 1 56 3 0 2 0 CRELD1,RPUSD3,IL17RE,CIDEC,IL17RC,JAGN1
Genomic distribution of SEs associated with CIDEC
Genome Browser

The strength of the tissue affected by the gene

Expression of CIDEC

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)