SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000167851
Gene: CD300A Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:74466399-74484794 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_081600468 chr17:74409861-74492310 Sample_02_0816 Ovary Clear cell ovarian cancer 468 17 2626 244 5 225 2637 GPRC5C,CD300A,GPR142,CD300LB,BTBD17
SE_02_131300063 chr17:74426510-74493206 Sample_02_1313 Brain hMGLs_CD33_SNP 63 17 2097 206 3 209 2637 GPRC5C,CD300A,CD300LB
SE_01_008400329 chr17:74426642-74486589 Sample_01_0084 Spleen spleen 329 12 1905 191 3 209 2637 GPRC5C,CD300A,CD300LB
SE_02_131500078 chr17:74426659-74492419 Sample_02_1315 Brain hMGLs_INPP5D SNP 78 14 2068 205 3 209 2637 GPRC5C,CD300A,CD300LB
SE_02_131800087 chr17:74426696-74478728 Sample_02_1318 Brain hMGLs_SORL1-A528T 87 11 1641 161 2 204 2221 GPRC5C,CD300A
SE_02_081700258 chr17:74426789-74478834 Sample_02_0817 Ovary Epithelial ovarian cancer 258 11 1644 162 2 204 2221 GPRC5C,CD300A
SE_02_131400062 chr17:74426869-74492727 Sample_02_1314 Brain hMGLs_TREM2-KO 62 14 2078 205 3 208 2637 GPRC5C,CD300A,CD300LB
SE_02_131200067 chr17:74426888-74478899 Sample_02_1312 Brain hMGLs_WT 67 13 1644 162 2 204 2221 GPRC5C,CD300A
SE_02_155300090 chr17:74426996-74504576 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 90 37 2415 240 4 214 2637 GPRC5C,CD300A,CD300LB,CD300C
SE_02_155400359 chr17:74429911-74471979 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 359 11 1323 129 2 187 1857 GPRC5C,CD300A
SE_02_082700321 chr17:74435734-74479035 Sample_02_0827 Stomach normal gastric 321 9 1367 141 2 112 1912 GPRC5C,CD300A
SE_02_082601031 chr17:74437052-74477987 Sample_02_0826 Stomach gastric tumor 1031 18 1301 133 2 109 1912 GPRC5C,CD300A
SE_02_022600061 chr17:74438847-74494151 Sample_02_0226 Blood KOPTK1 61 3 1737 178 3 113 2328 GPRC5C,CD300A,CD300LB
SE_02_003500070 chr17:74439080-74493852 Sample_02_0035 Peripheral blood CUTLL1_GSI_wash 70 12 1721 177 3 113 2328 GPRC5C,CD300A,CD300LB
SE_02_075100196 chr17:74439312-74480180 Sample_02_0751 Lymphoma Rec-1_WO 196 14 1299 137 2 111 1912 GPRC5C,CD300A
SE_02_075000287 chr17:74439322-74479397 Sample_02_0750 Lymphoma Rec-1_GSI 287 17 1275 135 2 111 1912 GPRC5C,CD300A
SE_02_131700121 chr17:74439689-74479556 Sample_02_1317 Brain hMGLs_SORL1-KO 121 11 1263 134 2 110 1889 GPRC5C,CD300A
SE_02_131600158 chr17:74439720-74478872 Sample_02_1316 Brain hMGLs_TREM2-R47H 158 10 1243 132 2 108 1888 GPRC5C,CD300A
SE_02_107000051 chr17:74439728-74492825 Sample_02_1070 Blood SupT1_WT 51 21 1680 175 3 112 2300 GPRC5C,CD300A,CD300LB
SE_02_117400893 chr17:74440387-74478606 Sample_02_1174 Brain GBM02 893 13 1209 130 2 90 1725 GPRC5C,CD300A
SE_02_034200535 chr17:74442209-74480161 Sample_02_0342 Liver HSPCs_F0 535 7 1207 135 2 77 1610 GPRC5C,CD300A
SE_00_005500576 chr17:74442215-74464909 Sample_00_0055 Spleen spleen 34y 576 6 693 77 1 70 927 GPRC5C,CD300A
SE_02_090601186 chr17:74442241-74463350 Sample_02_0906 Heart left ventricle_DCM_LV1072 1186 9 632 68 1 69 927 GPRC5C,CD300A
SE_02_090000907 chr17:74442285-74463348 Sample_02_0900 Heart left ventricle_LV1452 907 11 630 68 1 69 927 GPRC5C,CD300A
SE_02_092800014 chr17:74442293-74537536 Sample_02_0928 Peripheral blood neutrophils_Ecoli 14 25 2957 339 8 111 2795 GPRC5C,CD300A,CD300LB,C17ORF77,CD300C,CD300LD
SE_02_062900269 chr17:74442336-74478913 Sample_02_0629 Gastrointestinal Stromal GIST-T1_DMSO 269 10 1166 131 2 75 1610 GPRC5C,CD300A
SE_02_157300336 chr17:74442336-74530283 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 336 20 2759 311 8 103 2695 GPRC5C,CD300A,CD300LB,CD300C
SE_02_119100478 chr17:74442359-74480052 Sample_02_1191 Brain GBM25 478 11 1197 135 2 77 1610 GPRC5C,CD300A
SE_00_004600566 chr17:74442366-74463660 Sample_00_0046 Heart right ventricle_34y 566 12 636 69 1 69 927 GPRC5C,CD300A
SE_02_034300453 chr17:74442370-74479147 Sample_02_0343 Bone marrow HSPC_A0 453 5 1172 133 2 77 1610 GPRC5C,CD300A
SE_02_104700462 chr17:74442387-74488702 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 462 22 1475 167 3 79 2026 GPRC5C,CD300A,CD300LB
SE_02_050200376 chr17:74442396-74492740 Sample_02_0502 Blood HL-60_PMA_16h 376 13 1597 174 3 79 2026 GPRC5C,CD300A,CD300LB
SE_02_152901002 chr17:74442416-74482083 Sample_02_1529 Peripheral blood neutrophils_0BC75 1002 10 1269 140 2 78 1821 GPRC5C,CD300A,CD300LB
SE_01_005200401 chr17:74442451-74479874 Sample_01_0052 Blood neutrophil 401 4 1189 133 2 77 1610 GPRC5C,CD300A
SE_02_119700817 chr17:74442521-74479503 Sample_02_1197 Brain GBM33 817 16 1176 133 2 77 1610 GPRC5C,CD300A
SE_02_145800127 chr17:74442545-74494202 Sample_02_1458 Pancreas THP1+PANC1_shNC 127 13 1629 177 3 81 2026 GPRC5C,CD300A,CD300LB
SE_02_133000843 chr17:74442625-74478820 Sample_02_1330 Blood AMU-AML1 843 10 1155 131 2 75 1610 GPRC5C,CD300A
SE_02_104300080 chr17:74442730-74497954 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 80 44 1739 184 3 85 2026 GPRC5C,CD300A,CD300LB,CD300C
SE_02_098800951 chr17:74442747-74464356 Sample_02_0988 Blood K562_EPZ 951 4 653 71 1 70 927 GPRC5C,CD300A
SE_02_153000176 chr17:74442905-74533716 Sample_02_1530 Peripheral blood neutrophils_0BA0X 176 21 2844 322 8 111 2790 GPRC5C,CD300A,CD300LB,CD300C,CD300LD
SE_02_117500237 chr17:74443090-74491503 Sample_02_1175 Brain GBM03 237 10 1531 168 3 78 1988 GPRC5C,CD300A,CD300LB
SE_02_104800417 chr17:74443096-74492238 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 417 22 1556 172 3 78 1986 GPRC5C,CD300A,CD300LB
SE_02_156100101 chr17:74443104-74463249 Sample_02_1561 Gastrointestinal Stromal GIST-10_PDGFRA e1 101 3 604 66 1 68 885 GPRC5C,CD300A
SE_02_104900462 chr17:74443112-74492208 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 462 38 1552 172 3 78 1981 GPRC5C,CD300A,CD300LB
SE_02_155500109 chr17:74443204-74484509 Sample_02_1555 Gastrointestinal Stromal GIST-4_KIT e9 109 27 1338 151 2 78 1890 GPRC5C,CD300A,CD300LB
SE_02_087200472 chr17:74443285-74463305 Sample_02_0872 Colon HCT116_siCtrl-5FU 472 6 594 66 1 67 839 GPRC5C,CD300A
SE_02_103900246 chr17:74449411-74474620 Sample_02_1039 Peripheral blood CD4+ CD7- cells_CTCL1043 246 10 791 96 2 36 806 CD300A,GPRC5C
SE_02_034800121 chr17:74449887-74485293 Sample_02_0348 Peripheral blood CUTLL1_wild-type 121 1 1127 134 2 40 1267 CD300A,GPRC5C,CD300LB
SE_02_045500226 chr17:74450001-74493360 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 226 22 1362 154 3 40 1238 CD300A,GPRC5C,CD300LB
SE_02_034900174 chr17:74451804-74482047 Sample_02_0349 Peripheral blood CUTLL1_dimer-mutant 174 2 959 113 1 38 894 CD300A,GPRC5C,CD300LB
SE_02_148900237 chr17:74451909-74457592 Sample_02_1489 Bone TC-106 237 4 161 24 0 17 0 GPRC5C,CD300A
SE_02_003400270 chr17:74451950-74484598 Sample_02_0034 Peripheral blood CUTLL1_GSI 270 13 1055 126 1 39 1053 CD300A,GPRC5C,CD300LB
SE_02_045400809 chr17:74452684-74492835 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 809 16 1269 147 2 34 1099 CD300A,GPRC5C,CD300LB
SE_02_032000410 chr17:74454179-74492508 Sample_02_0320 Peripheral blood MO1043_ICN1_HA_H3K27Ac_a 410 5 1222 144 2 34 1099 CD300A,GPRC5C,CD300LB
SE_02_107100318 chr17:74454304-74480685 Sample_02_1071 Blood Jurkat_WT 318 5 858 104 1 32 683 CD300A,GPRC5C
SE_02_087500293 chr17:74457189-74484451 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 293 1 900 104 1 34 1026 CD300A,GPRC5C,CD300LB,CD300C,GPR142
SE_02_149200508 chr17:74458262-74474798 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 508 1 538 64 1 7 561 CD300A,GPRC5C
SE_02_002400233 chr17:74459871-74491901 Sample_02_0024 Blood CD56+ Natural Killer cells donor A 233 24 1036 116 2 10 1099 CD300A,GPRC5C,CD300LB
SE_00_000900820 chr17:74460018-74492110 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 820 4 1041 118 2 10 1099 CD300A,GPRC5C,CD300LB
SE_00_002700696 chr17:74460814-74492559 Sample_00_0027 Blood natural-killer-cell 696 4 1031 115 2 10 1099 CD300A,GPRC5C,CD300LB
SE_02_022500219 chr17:74461010-74493748 Sample_02_0225 Haematopoietic and lymphoid tissue PF-382 219 4 1058 116 2 10 1099 CD300A,GPRC5C,CD300LB
SE_02_032100468 chr17:74461189-74490658 Sample_02_0321 Peripheral blood MO1043_ICN1_HA_H3K27Ac_b 468 4 970 111 2 10 1099 CD300A,GPRC5C,CD300LB
SE_02_104200580 chr17:74461788-74479974 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 580 7 612 72 1 8 683 CD300A,GPRC5C
SE_00_000600760 chr17:74461809-74480299 Sample_00_0006 Blood CD14-positive-monocyte 760 2 625 73 1 8 683 CD300A,GPRC5C
SE_02_142901144 chr17:74462239-74479032 Sample_02_1429 Blood GM12878_WT 1144 7 570 69 1 8 683 CD300A,GPRC5C,BTBD17,CD300C,CD300LB
SE_02_063900204 chr17:74462593-74480188 Sample_02_0639 Blood T-ALL PDX 204 8 599 72 1 8 683 CD300A,GPRC5C
Genomic distribution of SEs associated with CD300A
Genome Browser

The strength of the tissue affected by the gene

Expression of CD300A

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)