SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000102970
Gene: CCL17 Gene type: protein_coding
Strand: + External links:
Genomic region: chr16:57404767-57416063 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_078100067 chr16:57359400-57419569 Sample_02_0781 Lymphoma Pfeiffer_DMSO 67 8 1824 149 4 122 2061 CCL22,CX3CL1,CCL17,COQ9,POLR2C,CIAPIN1
SE_02_078300821 chr16:57369585-57419344 Sample_02_0783 Blood MEC2 821 16 1544 126 4 115 1401 CX3CL1,CCL17,COQ9,POLR2C,CIAPIN1,CCL22
SE_02_011900046 chr16:57372064-57419747 Sample_02_0119 Haematopoietic and lymphoid tissue PFEIFFER 46 22 1497 120 4 114 1401 CX3CL1,CCL17,POLR2C,CCL22,COQ9,CIAPIN1
SE_02_133000744 chr16:57378006-57420397 Sample_02_1330 Blood AMU-AML1 744 14 1333 110 4 82 1273 CX3CL1,CCL17,COQ9,POLR2C,CIAPIN1,CCL22
SE_02_104602980 chr16:57409586-57425349 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2980 10 458 44 1 23 358 CCL17,CX3CL1,COQ9,POLR2C,CIAPIN1
SE_02_072900543 chr16:57409825-57417633 Sample_02_0729 Lymphoma I10_Mantle cell lymphoma tissue_THZ1 543 4 249 22 1 17 358 CCL17,CX3CL1,COQ9,POLR2C,CIAPIN1
SE_02_003900929 chr16:57416989-57431930 Sample_02_0039 Embryo AFG 929 5 387 41 0 18 317 CIAPIN1,COQ9,CCL17,CX3CL1,POLR2C
Genomic distribution of SEs associated with CCL17
Genome Browser

The strength of the tissue affected by the gene

Expression of CCL17

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)