Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000253276
Gene: CCDC71L Gene type: protein_coding
Strand: - External links:
Genomic region: chr7:106654360-106661158 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_076201057 chr7:106448821-106506928 Sample_02_0762 Podocyte podocyte_CTL 1057 11 1688 45 0 54 111 CCDC71L
SE_02_075200567 chr7:106503997-106536080 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 567 4 950 22 4 41 0 CCDC71L
SE_04_000200190 chr7:106524604-106601156 Sample_04_0002 Blood cold shocked K562 190 9 2240 93 13 109 0 CCDC71L,HBP1
SE_02_103300135 chr7:106524722-106598809 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 135 16 2178 91 13 105 0 CCDC71L,HBP1
SE_02_098700132 chr7:106524744-106599518 Sample_02_0987 Blood K562_Control_1 132 17 2192 91 13 106 0 CCDC71L,HBP1
SE_02_109900348 chr7:106524846-106599596 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 348 21 2193 91 13 106 0 CCDC71L,HBP1
SE_02_094900655 chr7:106524913-106543805 Sample_02_0949 Umbilical artery HUAEC_WT 655 8 614 30 0 20 0 CCDC71L
SE_02_054500040 chr7:106534031-106601172 Sample_02_0545 Bone marrow K562 WT 40 17 1905 82 13 102 0 CCDC71L,HBP1
SE_02_111600170 chr7:106534259-106619102 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 170 18 2352 84 13 133 36 CCDC71L,HBP1
SE_04_000100174 chr7:106534356-106619397 Sample_04_0001 Blood heat shocked K562 174 11 2361 84 13 133 36 CCDC71L,HBP1
SE_02_113000218 chr7:106534467-106601052 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 218 19 1891 82 13 102 0 CCDC71L,HBP1
SE_02_122900630 chr7:106534508-106575347 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 630 17 1211 53 4 47 0 CCDC71L,HBP1
SE_02_156900828 chr7:106536490-106543566 Sample_02_1569 Endothelial Endothelial cells 828 2 199 15 0 8 0 CCDC71L
SE_02_130901153 chr7:106536663-106543491 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 1153 2 197 15 0 8 0 CCDC71L
SE_02_054700044 chr7:106562170-106572146 Sample_02_0547 Bone marrow K562_MYO1D_Hub_KO 44 4 297 10 1 31 0 CCDC71L
SE_02_098800856 chr7:106562214-106575719 Sample_02_0988 Blood K562_EPZ 856 4 417 17 2 34 0 CCDC71L,HBP1
SE_02_054600181 chr7:106562483-106572054 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 181 3 286 9 1 31 0 CCDC71L
SE_02_124200329 chr7:106562530-106619212 Sample_02_1242 Skin UISO_virus_negative 329 19 1534 46 10 119 36 CCDC71L
SE_01_009500239 chr7:106566386-106570172 Sample_01_0095 Embryo neuroepithelial stem cell stably expressing HES5 originated from H9 239 1 115 3 0 24 0 CCDC71L
SE_02_058500883 chr7:106588180-106610254 Sample_02_0585 Umbilical vein HUVEC 0hour 883 7 561 13 4 47 7 CCDC71L
SE_02_083100922 chr7:106588288-106610260 Sample_02_0831 Umblical vein HUVECs_TNF0min 922 6 559 13 4 47 9 CCDC71L
SE_02_068700688 chr7:106595808-106612731 Sample_02_0687 Lung NCI-H146_no infection 688 2 414 5 1 28 36 CCDC71L
SE_02_049800541 chr7:106598555-106639835 Sample_02_0498 Fetal lung IMR90 Senescent_1 541 9 1098 6 1 68 36 CCDC71L
SE_02_060500715 chr7:106598625-106640416 Sample_02_0605 Skin Skin Fibroblast_DMSO 715 10 1112 6 1 68 36 CCDC71L
SE_02_050000738 chr7:106598649-106631088 Sample_02_0500 Fetal lung IMR90_#2 738 16 863 6 0 62 36 CCDC71L
SE_02_060600942 chr7:106608446-106630586 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 942 10 587 2 0 49 36 CCDC71L
SE_02_132801246 chr7:106608756-106629474 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 1246 9 541 1 0 46 36 CCDC71L
SE_02_087501086 chr7:106644828-106694950 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 1086 11 1437 39 0 138 606 CCDC71L
SE_02_149200713 chr7:106644955-106695259 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 713 7 1442 39 0 138 606 CCDC71L
SE_02_103300423 chr7:106644969-106661919 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 423 2 419 10 0 110 606 CCDC71L
SE_02_054500190 chr7:106653491-106661888 Sample_02_0545 Bone marrow K562 WT 190 3 211 7 0 93 606 CCDC71L
SE_04_000200730 chr7:106654932-106662900 Sample_04_0002 Blood cold shocked K562 730 1 201 5 0 97 606 CCDC71L
SE_04_000101056 chr7:106655751-106661909 Sample_04_0001 Blood heat shocked K562 1056 1 147 1 0 93 606 CCDC71L
SE_02_113000567 chr7:106655927-106661735 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 567 1 143 1 0 93 606 CCDC71L
SE_02_111600436 chr7:106655981-106680504 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 436 4 698 6 0 114 606 CCDC71L,NAMPT,PIK3CG,HBP1
SE_02_138200518 chr7:106656027-106684026 Sample_02_1382 Pancreas Pancreatic cancer cells_Triptolide 518 9 794 11 0 116 606 CCDC71L
SE_02_054700090 chr7:106656274-106661141 Sample_02_0547 Bone marrow K562_MYO1D_Hub_KO 90 1 120 1 0 84 543 CCDC71L
SE_02_054600274 chr7:106656838-106661237 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 274 1 107 1 0 86 557 CCDC71L
SE_02_125900892 chr7:106657789-106661159 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 892 2 82 1 0 71 488 CCDC71L
SE_02_081601858 chr7:106658467-106662274 Sample_02_0816 Ovary Clear cell ovarian cancer 1858 1 89 1 0 72 509 CCDC71L
SE_02_064502330 chr7:106658544-106661248 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 2330 2 65 1 0 65 469 CCDC71L
SE_02_126000695 chr7:106658988-106661177 Sample_02_1260 Bone Im-GCT-3504_G34W-repair_4F5 695 1 49 0 0 52 417 CCDC71L
SE_02_061500995 chr7:106677223-106684160 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 995 1 197 7 0 7 0 CCDC71L
SE_02_149200437 chr7:106712815-106737369 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 437 5 715 24 7 16 0 CCDC71L
SE_02_087500611 chr7:106713493-106737338 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 611 6 680 22 7 16 0 CCDC71L
SE_02_048102077 chr7:106713514-106722054 Sample_02_0481 Mammary gland MDA-MB231 2077 3 253 10 2 10 0 CCDC71L
SE_02_060500795 chr7:106714063-106737872 Sample_02_0605 Skin Skin Fibroblast_DMSO 795 6 675 22 7 16 0 CCDC71L
SE_02_143801504 chr7:106714080-106737340 Sample_02_1438 Liver LSEC 1504 6 656 22 7 16 0 CCDC71L
SE_02_127100554 chr7:106714099-106737436 Sample_02_1271 Leiomyosarcoma SK-LMS-1_WT 554 4 660 22 7 16 0 CCDC71L
SE_02_143601364 chr7:106714132-106737346 Sample_02_1436 Liver LSEC-Ctrl 1364 6 655 22 7 16 0 CCDC71L
SE_02_143701259 chr7:106714149-106737436 Sample_02_1437 Liver LSEC-TNF 1259 5 657 22 7 16 0 CCDC71L
SE_02_049901333 chr7:106714178-106748250 Sample_02_0499 Fetal lung IMR90 IR Senescence 1333 10 877 22 9 19 0 CCDC71L
SE_02_060600829 chr7:106714208-106737337 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 829 6 651 22 7 16 0 CCDC71L
SE_02_047401213 chr7:106714337-106720711 Sample_02_0474 Fibroblast umbilical cord Fibroblast 1213 2 179 8 2 8 0 CCDC71L
SE_02_127200803 chr7:106714495-106720634 Sample_02_1272 Leiomyosarcoma SK-LMS-1_HDAC4KO 803 7 172 8 2 7 0 CCDC71L
SE_02_050001049 chr7:106714497-106737764 Sample_02_0500 Fetal lung IMR90_#2 1049 13 649 22 7 16 0 CCDC71L
SE_02_147700734 chr7:106715844-106720849 Sample_02_1477 Bone EW-22 734 2 128 3 2 8 0 CCDC71L
SE_02_049101267 chr7:106716041-106737478 Sample_02_0491 Pharyng Detroit 562-Control 1267 6 593 17 7 16 0 CCDC71L
SE_02_126301742 chr7:106716213-106720740 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 1742 1 118 2 2 8 0 CCDC71L
SE_02_136800266 chr7:106716498-106737374 Sample_02_1368 Pancreas MIA PaCa-2-untreated 266 7 581 16 7 15 0 CCDC71L
SE_02_154800438 chr7:106716556-106749235 Sample_02_1548 Gastrointestinal Stromal GIST-226 438 10 824 16 9 18 0 CCDC71L
SE_02_149400032 chr7:106716704-106779838 Sample_02_1494 Other monocyte-derived dendritic cells_0h 32 23 1665 87 15 23 78 CCDC71L
SE_02_071201336 chr7:106717007-106737119 Sample_02_0712 Pancreas BxPC3_sgNEG 1336 6 566 16 7 14 0 CCDC71L

Genomic distribution of SEs associated with CCDC71L

The strength of the tissue affected by the gene


Expression of CCDC71L