Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000225062
Gene: CATIP-AS1 Gene type: lncRNA
Strand: - External links:
Genomic region: chr2:218366665-218367835 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_092700251 chr2:218359880-218373362 Sample_02_0927 Peripheral blood neutrophils_US 251 1 420 41 1 15 665 CATIP,CATIP-AS1,CTDSP1,PNKD,MIR26B,MIR6810,VIL1,SLC11A1,CATIP-AS2,RQCD1,USP37,TMBIM1
SE_02_152900370 chr2:218362777-218373743 Sample_02_1529 Peripheral blood neutrophils_0BC75 370 1 351 37 1 11 540 CATIP,CATIP-AS1,CTDSP1,PNKD,MIR26B,MIR6810,VIL1,SLC11A1,CATIP-AS2,RQCD1,USP37,TMBIM1
SE_02_153100323 chr2:218365514-218374087 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 323 1 260 24 2 10 390 CATIP,CATIP-AS1,CTDSP1,PNKD,MIR26B,MIR6810,VIL1,SLC11A1,CATIP-AS2,RQCD1,USP37,TMBIM1
SE_02_135000396 chr2:218365755-218373253 Sample_02_1350 Leukophereses leukophereses_p456 396 1 224 21 1 10 390 CATIP,CATIP-AS1,CTDSP1,PNKD,MIR26B,MIR6810,VIL1,SLC11A1,CATIP-AS2
SE_02_134800428 chr2:218366739-218372443 Sample_02_1348 Leukophereses leukophereses_p408 428 1 171 16 1 10 343 CATIP,CATIP-AS1,CTDSP1,PNKD,MIR26B,MIR6810,VIL1,SLC11A1,CATIP-AS2
SE_02_117500792 chr2:218366820-218373127 Sample_02_1175 Brain GBM03 792 1 188 17 1 10 336 CATIP,CATIP-AS1,CTDSP1,PNKD,MIR26B,MIR6810,VIL1,SLC11A1,CATIP-AS2
SE_02_156000955 chr2:218366950-218373047 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 955 1 181 17 1 10 309 CATIP,CATIP-AS1,CTDSP1,PNKD,MIR26B,MIR6810,VIL1,SLC11A1,CATIP-AS2
SE_00_005500596 chr2:218366994-218372310 Sample_00_0055 Spleen spleen 34y 596 1 159 16 1 10 304 CATIP,CATIP-AS1,CTDSP1,PNKD,MIR26B,MIR6810,VIL1,SLC11A1,CATIP-AS2,CXCR1,GPBAR1,AAMP,ZNF142,ARPC2,USP37,TMBIM1

Genomic distribution of SEs associated with CATIP-AS1

The strength of the tissue affected by the gene


Expression of CATIP-AS1