SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000162545
Gene: CAMK2N1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:20482391-20486210 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_121300215 chr1:20421885-20494467 Sample_02_1213 Brain GBM31 215 23 1932 126 4 325 681 CAMK2N1,LINC01141,MUL1
SE_02_117300165 chr1:20426541-20494549 Sample_02_1173 Brain GBM01 165 29 1840 125 4 333 681 CAMK2N1,LINC01141,MUL1
SE_02_120300198 chr1:20430144-20494676 Sample_02_1203 Brain NB1 198 22 1756 121 4 338 589 CAMK2N1,MUL1,LINC01141
SE_02_120500289 chr1:20430456-20494501 Sample_02_1205 Brain NB3 289 20 1741 121 4 328 589 CAMK2N1,MUL1,LINC01141
SE_02_119600225 chr1:20446344-20495723 Sample_02_1196 Brain GBM32 225 10 1357 96 1 290 589 CAMK2N1,MUL1,LINC01141
SE_02_035000209 chr1:20462143-20493319 Sample_02_0350 Dorsolateral prefrontal cortex dorsolateral-prefrontal-cortex 209 7 839 60 1 222 589 CAMK2N1,MUL1,LOC339505
SE_02_101100188 chr1:20462232-20484562 Sample_02_1011 Brain Lateral temporal lobe_5T_AD 188 4 613 39 1 130 183 CAMK2N1,MUL1,LINC01141
SE_02_101300293 chr1:20462236-20487300 Sample_02_1013 Brain Lateral temporal lobe_6T_AD 293 9 668 45 1 216 589 CAMK2N1,MUL1,LINC01141
SE_02_121100636 chr1:20462311-20495024 Sample_02_1211 Brain GBM21 636 7 866 61 1 245 589 CAMK2N1,MUL1,LINC01141
SE_02_119800289 chr1:20462411-20494959 Sample_02_1198 Brain GBM34 289 14 860 61 1 245 589 CAMK2N1,MUL1,LINC01141
SE_02_104602728 chr1:20465095-20500682 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2728 8 959 72 1 240 852 CAMK2N1,MUL1,LINC01141
SE_02_039600884 chr1:20466176-20501425 Sample_02_0396 Skin NHEK-D 884 8 957 71 1 247 967 CAMK2N1,MUL1,LOC339505
SE_01_007900466 chr1:20469762-20488201 Sample_01_0079 Peyers patch Peyers-patch 466 4 464 31 1 196 589 CAMK2N1,MUL1,LOC339505
SE_00_002000241 chr1:20469772-20488378 Sample_00_0020 Large intestine large-intestine_108d 241 2 469 31 1 196 589 CAMK2N1,MUL1,LOC339505
SE_02_003301096 chr1:20470044-20494866 Sample_02_0033 Pancreas pancreatic-islets-F 1096 4 626 43 1 223 589 CAMK2N1,MUL1,LOC339505
SE_00_003500451 chr1:20470045-20487763 Sample_00_0035 Sigmoid colon sigmoid-colon 451 5 442 27 1 195 589 CAMK2N1,MUL1,LOC339505
SE_02_140800389 chr1:20470143-20499295 Sample_02_1408 Prostate LNCaP_EtOH_vehicle_4h_MED19_OE 389 11 756 51 1 224 598 CAMK2N1,MUL1,LINC01141
SE_02_141001309 chr1:20470458-20495729 Sample_02_1410 Brain GSC6 1309 6 643 48 1 223 589 CAMK2N1,MUL1,LINC01141
SE_02_117600656 chr1:20470490-20494621 Sample_02_1176 Brain GBM04 656 9 608 42 1 221 589 CAMK2N1,MUL1,LINC01141
SE_02_023700425 chr1:20470511-20497028 Sample_02_0237 Colon V389 425 9 673 48 1 222 589 CAMK2N1,MUL1,LOC339505
SE_02_047700366 chr1:20470657-20496340 Sample_02_0477 Colon intestinal epithelial organoids_139a 366 12 651 48 1 218 589 CAMK2N1,MUL1,LINC01141
SE_02_077500376 chr1:20471365-20502836 Sample_02_0775 Pancreas EndoC-BH1_SE 376 14 836 60 1 238 1055 CAMK2N1,MUL1,FAM43B,LINC01141
SE_02_114500870 chr1:20472312-20492527 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 870 10 519 34 1 190 589 CAMK2N1,MUL1,LINC01141
SE_01_000600526 chr1:20472508-20487284 Sample_01_0006 Lung A549_ethanol_1h 526 1 362 21 1 181 589 CAMK2N1,MUL1,LOC339505
SE_02_029700605 chr1:20472544-20495779 Sample_02_0297 Neuroblastoma CLB-CAR 605 4 584 42 1 211 589 CAMK2N1,MUL1,LOC339505
SE_02_027700359 chr1:20472576-20488097 Sample_02_0277 Retina FW18 359 2 384 23 1 182 589 CAMK2N1,MUL1,LOC339505
SE_02_025100481 chr1:20472787-20487572 Sample_02_0251 Autonomic ganglia SH-SY5Y-MYCN-OFF 481 4 359 21 1 182 589 CAMK2N1,MUL1,LOC339505
SE_02_004800094 chr1:20472889-20487637 Sample_02_0048 Embryo endodermal CyT49_HE 94 5 359 21 1 182 589 CAMK2N1,MUL1,LOC339505
SE_02_098901340 chr1:20472991-20493937 Sample_02_0989 Kidney kidney cortex_WT 1340 3 527 36 1 191 589 CAMK2N1,MUL1,LINC01141
SE_02_004000193 chr1:20473123-20487648 Sample_02_0040 Embryo PFG 193 3 356 21 1 182 589 CAMK2N1,MUL1,LOC339505
SE_02_075300275 chr1:20473125-20487641 Sample_02_0753 Embryo ES-derived progenitors_FG type 275 5 356 21 1 182 589 CAMK2N1,MUL1,LINC01141
SE_04_000500337 chr1:20473134-20487069 Sample_04_0005 Lung A549 FOXA2 overexpressed 337 3 339 20 1 167 589 CAMK2N1,MUL1,LINC01141
SE_02_004500668 chr1:20473161-20482432 Sample_02_0045 Embryo endodermal CyT49_ES_D7 668 3 251 13 1 56 47 CAMK2N1,MUL1,LOC339505
SE_02_075600326 chr1:20473203-20487393 Sample_02_0756 Embryo ES-derived progenitors_FG FOXA2 -/- 326 5 349 21 1 181 589 CAMK2N1,MUL1,LINC01141
SE_00_003600334 chr1:20473270-20488043 Sample_00_0036 Small intestine small-intestine_108days 334 2 366 23 1 182 589 CAMK2N1,MUL1,LOC339505
SE_02_075700205 chr1:20473431-20487501 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 205 5 343 21 1 182 589 CAMK2N1,MUL1,LINC01141
SE_02_052400395 chr1:20473440-20487192 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 395 7 335 21 1 181 589 CAMK2N1,MUL1,LINC01141
SE_04_000600435 chr1:20473456-20486885 Sample_04_0006 Lung A549 GFP control 435 3 325 19 1 160 589 CAMK2N1,MUL1,LINC01141
SE_02_152300436 chr1:20473606-20486656 Sample_02_1523 Lung A549 DMSO 436 6 316 18 1 151 589 CAMK2N1,MUL1,LINC01141
SE_02_075400837 chr1:20473620-20485460 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 837 5 295 17 1 119 296 CAMK2N1,MUL1,LINC01141
SE_01_010900728 chr1:20473657-20487482 Sample_01_0109 Colon transverse colon_54y 728 7 338 21 1 181 589 CAMK2N1,MUL1,LINC01141
SE_02_004700526 chr1:20473877-20496971 Sample_02_0047 Pancreatic endoderm IIDP/donor790 526 4 582 42 1 210 589 CAMK2N1,MUL1,LOC339505
SE_02_047800439 chr1:20474053-20496288 Sample_02_0478 Colon normal colon mucosa 439 9 562 42 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_028500177 chr1:20474090-20487486 Sample_02_0285 Liver HuH7_untreat 177 2 333 21 1 180 589 CAMK2N1,MUL1,LOC339505
SE_02_024200928 chr1:20474209-20497084 Sample_02_0242 Colon V481 928 3 576 42 1 209 589 CAMK2N1,MUL1,LOC339505
SE_02_025700194 chr1:20474233-20494860 Sample_02_0257 Endometrioid endometrioid_adenocarcinoma_TumorA 194 3 516 37 1 208 589 CAMK2N1,MUL1,LOC339505
SE_02_032200712 chr1:20474237-20487900 Sample_02_0322 Colon Caco-2 712 2 337 21 1 180 589 CAMK2N1,MUL1,LOC339505
SE_02_019300382 chr1:20474327-20487826 Sample_02_0193 Kidney Patient_x750N 382 1 332 19 1 180 589 CAMK2N1,MUL1,LOC339505
SE_02_001500099 chr1:20474384-20487616 Sample_02_0015 Liver HepG2_shNS 99 3 327 19 1 180 589 CAMK2N1,MUL1,LOC339505
SE_01_003800155 chr1:20474389-20487484 Sample_01_0038 Liver HepG2 155 2 324 19 1 180 589 CAMK2N1,MUL1,LOC339505
SE_02_095300282 chr1:20474448-20495997 Sample_02_0953 Brain H3.3K27M_1840 282 10 542 40 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_077600703 chr1:20474467-20500742 Sample_02_0776 Pancreas EndoC-BH1 703 4 688 52 1 214 863 CAMK2N1,MUL1,LINC01141
SE_02_158000538 chr1:20474520-20496296 Sample_02_1580 Renal 786-O 538 8 551 40 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_136500605 chr1:20474623-20494538 Sample_02_1365 Pancreas AsPC1-untreated 605 6 501 34 1 202 589 CAMK2N1,MUL1,LINC01141
SE_02_024100365 chr1:20474677-20494615 Sample_02_0241 Colon V456 365 6 503 34 1 207 589 CAMK2N1,MUL1,LOC339505
SE_02_067400251 chr1:20474748-20496219 Sample_02_0674 Endometrium E1_FA 251 6 545 40 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_117700631 chr1:20474749-20496213 Sample_02_1177 Brain GBM05 631 7 545 40 1 209 589 CAMK2N1,MUL1,LINC01141
SE_01_009900435 chr1:20474894-20487401 Sample_01_0099 Colon transverse colon 435 5 315 19 1 179 589 CAMK2N1,MUL1,LINC01141
SE_02_125800945 chr1:20474911-20498167 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 945 6 593 42 1 209 589 CAMK2N1,MUL1,LINC01141
SE_00_004900444 chr1:20474926-20486299 Sample_00_0049 Small intestine small intestine 30y 444 6 281 16 1 140 547 CAMK2N1,MUL1,LINC01141,FAM43B
SE_02_067200335 chr1:20475036-20496816 Sample_02_0672 Endometrium endometrium cancer_DSG 335 9 558 40 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_103600591 chr1:20475408-20502748 Sample_02_1036 Mammary gland HCC70_XY018 591 8 725 52 1 231 1055 CAMK2N1,MUL1,FAM43B,LINC01141
SE_02_003200463 chr1:20475534-20495087 Sample_02_0032 Pancreas pancreatic-islets-M 463 3 488 33 1 208 589 CAMK2N1,MUL1,LOC339505
SE_01_003701123 chr1:20475596-20487844 Sample_01_0037 Liver hepatocyte 1123 3 299 16 1 180 589 CAMK2N1,MUL1,LOC339505
SE_02_004900156 chr1:20475655-20487603 Sample_02_0049 Embryo endodermal CyT49_GTtoH 156 2 293 16 1 180 589 CAMK2N1,MUL1,LOC339505
SE_02_016600550 chr1:20475817-20497726 Sample_02_0166 Mammary gland HCC1954_Parental 550 3 552 38 1 209 589 CAMK2N1,MUL1,LOC339505
SE_02_016700443 chr1:20475817-20497726 Sample_02_0167 Mammary gland HCC1954_LCC2 443 3 552 38 1 209 589 CAMK2N1,MUL1,LOC339505
SE_02_004600661 chr1:20475829-20482462 Sample_02_0046 Embryo endodermal CyT49_ES_D10 661 2 185 8 1 55 51 CAMK2N1,MUL1,LOC339505
SE_02_001400055 chr1:20475851-20496217 Sample_02_0014 Liver HepG2_shBRG1 55 4 513 37 1 209 589 CAMK2N1,MUL1,LOC339505
SE_02_049400220 chr1:20475878-20487515 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 220 4 288 16 1 180 589 CAMK2N1,MUL1,LINC01141
SE_02_002100771 chr1:20475883-20498049 Sample_02_0021 Colon V429 771 4 561 39 1 209 589 CAMK2N1,MUL1,LOC339505
SE_02_137100920 chr1:20475913-20498071 Sample_02_1371 Pancreas Patu899S-untreated 920 10 561 39 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_027500372 chr1:20475936-20487823 Sample_02_0275 Retina FW14 372 2 292 16 1 180 589 CAMK2N1,MUL1,LOC339505
SE_02_102500634 chr1:20475968-20498470 Sample_02_1025 Esophagus KYSE150 634 7 581 39 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_005600560 chr1:20475972-20497236 Sample_02_0056 Mammary gland HMEC 560 5 536 37 1 209 589 CAMK2N1,MUL1,LOC339505
SE_02_097700492 chr1:20475983-20496210 Sample_02_0977 Brain 2089_H3.3K27WT 492 6 511 37 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_119700526 chr1:20475994-20495212 Sample_02_1197 Brain GBM33 526 10 484 33 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_120000250 chr1:20476004-20496305 Sample_02_1200 Brain GBM36 250 8 513 37 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_049500276 chr1:20476013-20487397 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 276 5 279 16 1 179 589 CAMK2N1,MUL1,LINC01141
SE_02_067900286 chr1:20476050-20493771 Sample_02_0679 Embryo H1 hESC-derived neural progenitor cells_Smad_24hr 286 5 451 31 1 188 589 CAMK2N1,MUL1,LINC01141
SE_02_119301058 chr1:20476058-20496184 Sample_02_1193 Brain GBM27 1058 7 508 37 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_135800264 chr1:20476072-20498105 Sample_02_1358 Other IC8-deltaEGF-L1596H_GSI_2h 264 6 558 39 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_113600338 chr1:20476139-20497429 Sample_02_1136 Bone U2OS-anaphase/telophase 338 4 539 38 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_005700583 chr1:20476177-20506467 Sample_02_0057 Mammary gland vHMEC 583 6 819 61 1 233 1093 CAMK2N1,MUL1,FAM43B,LOC339505
SE_02_135700219 chr1:20476181-20497985 Sample_02_1357 Other IC8-deltaEGF-L1596H_GSI_0h 219 7 553 39 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_071100782 chr1:20476182-20497171 Sample_02_0711 Pancreas hN35_organoid 782 10 531 37 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_097100613 chr1:20476196-20494933 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 613 3 469 32 1 208 589 CAMK2N1,MUL1,LINC01141
SE_02_103500587 chr1:20476200-20504079 Sample_02_1035 Mammary gland HCC70_Vehicle 587 8 752 58 1 233 1093 CAMK2N1,MUL1,FAM43B,LINC01141
SE_02_117400788 chr1:20476249-20495723 Sample_02_1174 Brain GBM02 788 5 496 37 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_135900289 chr1:20476251-20498142 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 289 7 557 39 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_096200952 chr1:20476298-20494668 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 952 4 461 30 1 208 589 CAMK2N1,MUL1,LINC01141
SE_02_052500758 chr1:20476303-20485437 Sample_02_0525 Pancreas iPS derived pancreatic precursor cells_Lane1 758 6 233 11 1 115 282 CAMK2N1,MUL1,LINC01141
SE_02_096900302 chr1:20476333-20495331 Sample_02_0969 Brain H3.3K27M_PL637 302 5 479 32 1 209 589 CAMK2N1,MUL1,LINC01141
SE_02_104902086 chr1:20476408-20512783 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 2086 10 1003 74 1 239 1256 CAMK2N1,MUL1,FAM43B,LINC01141
SE_02_096700516 chr1:20476459-20495222 Sample_02_0967 Brain H3.3K27M_JN57 516 5 475 32 1 206 589 CAMK2N1,MUL1,LINC01141
SE_00_001500515 chr1:20477040-20487313 Sample_00_0015 Lung IMR-90 515 3 252 14 1 170 589 CAMK2N1,MUL1,LOC339505
SE_02_095500296 chr1:20477367-20494550 Sample_02_0955 Brain IDH1_2469 296 4 429 29 1 190 589 CAMK2N1,MUL1,LINC01141
SE_02_044200651 chr1:20477405-20496800 Sample_02_0442 Bone MG63.3 651 15 494 35 1 194 589 CAMK2N1,MUL1,LINC01141
SE_02_096600819 chr1:20477414-20494499 Sample_02_0966 Brain H3.3K27M_JN29-BS3 819 4 429 29 1 181 589 CAMK2N1,MUL1,LINC01141
SE_02_080100404 chr1:20477542-20495664 Sample_02_0801 Brain 2235 404 4 461 35 1 191 589 CAMK2N1,MUL1,LINC01141
SE_02_049300426 chr1:20479400-20488411 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 426 3 219 14 0 146 589 CAMK2N1,MUL1
SE_02_100800331 chr1:20480078-20494320 Sample_02_1008 Brain Lateral temporal lobe_1T_AD 331 5 351 26 0 159 589 CAMK2N1,MUL1
SE_03_000300477 chr1:20480351-20497292 Sample_03_0003 Foreskin foreskin-keratinocyte-calcium5.5day 477 2 415 33 0 170 589 CAMK2N1,MUL1
SE_02_064800619 chr1:20481054-20497246 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 619 5 391 31 0 170 589 CAMK2N1,MUL1
SE_02_064700357 chr1:20481062-20497488 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 357 6 398 32 0 170 589 CAMK2N1,MUL1
SE_02_047900712 chr1:20481077-20505378 Sample_02_0479 Head and neck SCC25 712 8 653 54 0 194 1093 CAMK2N1,MUL1,FAM43B
SE_02_065200339 chr1:20481189-20497293 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 339 5 387 32 0 170 589 CAMK2N1,MUL1
SE_02_064501055 chr1:20481653-20496886 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1055 5 368 31 0 160 589 CAMK2N1,MUL1
SE_02_032300340 chr1:20482977-20509028 Sample_02_0323 Colon RKO 340 3 709 60 0 170 1170 CAMK2N1,MUL1,FAM43B
SE_02_064600717 chr1:20483650-20496203 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 717 3 311 28 0 126 453 CAMK2N1,MUL1
SE_02_068100525 chr1:20483667-20487156 Sample_02_0681 Embryo H1 hESC-derived neural progenitor cells_Smad_72hr 525 2 78 7 0 96 450 CAMK2N1,MUL1
SE_02_065000679 chr1:20483691-20496927 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 679 3 332 28 0 120 450 CAMK2N1,MUL1
SE_02_065700172 chr1:20483706-20496839 Sample_02_0657 Tracheobronchial epithelial HTBE_H1N1_06h 172 5 332 28 0 119 449 CAMK2N1,MUL1
SE_02_064900497 chr1:20483719-20496904 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 497 3 332 28 0 119 444 CAMK2N1,MUL1
SE_02_079500451 chr1:20483748-20496100 Sample_02_0795 Brain 1953 451 3 307 28 0 119 440 CAMK2N1,MUL1
SE_02_096000439 chr1:20483773-20494427 Sample_02_0960 Brain H3.3K27M_Tumor-derived cell-line_BT869p21-Rx_cells 439 2 261 22 0 105 437 CAMK2N1,MUL1
SE_02_064400598 chr1:20483806-20496229 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 598 4 307 28 0 119 424 CAMK2N1,MUL1
SE_02_078500263 chr1:20484006-20494855 Sample_02_0785 Brain 2097 263 3 263 23 0 118 406 CAMK2N1,MUL1
SE_02_107300583 chr1:20484048-20497921 Sample_02_1073 Keratinocyte keratinocytes stem cell 583 2 342 30 0 119 406 CAMK2N1,MUL1
SE_02_132400122 chr1:20484107-20486685 Sample_02_1324 Hindbrain Hindbrain derived neural stem cells_NS19_H3.3K27M 122 1 51 4 0 61 406 CAMK2N1,MUL1
SE_02_112000330 chr1:20484129-20498463 Sample_02_1120 Neonatal foreskin keratinocytes_CTR 330 5 367 30 0 119 406 CAMK2N1,MUL1
SE_02_132000545 chr1:20493278-20497198 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 545 1 90 7 0 24 0 MUL1,CAMK2N1
SE_02_132200894 chr1:20493643-20497447 Sample_02_1322 Connective Tissue HT1080_WT 894 1 92 7 0 21 0 MUL1,CAMK2N1
SE_02_009900797 chr1:20493668-20498306 Sample_02_0099 Foreskin Epidermal-Stem-Cells_shDNMT3B 797 1 120 8 0 21 0 CAMK2N1,MUL1
SE_02_009700807 chr1:20493954-20498445 Sample_02_0097 Foreskin Epidermal-Stem-Cells_shCTRL 807 1 123 8 0 20 0 CAMK2N1,MUL1
Genomic distribution of SEs associated with CAMK2N1
Genome Browser

The strength of the tissue affected by the gene

Expression of CAMK2N1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)