SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID:
Gene: C22ORF29 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_143301245 chr22:19780270-19851213 Sample_02_1433 Bone A673 STAG2 null 1245 31 2078 190 7 184 1823 C22ORF29,TBX1,GNB1L
SE_02_103600597 chr22:19787873-19895030 Sample_02_1036 Mammary gland HCC70_XY018 597 38 3315 363 10 337 3334 C22ORF29,GNB1L,TXNRD2,TBX1,COMT
SE_02_104300178 chr22:19795739-19896739 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 178 42 3147 347 10 320 3267 C22ORF29,GNB1L,TXNRD2,TBX1,COMT
SE_02_120100366 chr22:19797602-19825298 Sample_02_1201 Brain GBM37 366 7 897 60 3 117 569 GNB1L,C22ORF29,TBX1
SE_02_088601884 chr22:19798202-19816587 Sample_02_0886 Skin foreskin_ p63KLF4 1884 6 586 43 3 92 330 GNB1L,C22ORF29,TBX1
SE_02_087400381 chr22:19798870-19823151 Sample_02_0874 Colon HCT116_siGLIS2.2-5FU 381 9 793 54 3 93 569 GNB1L,C22ORF29,TBX1
SE_02_087200349 chr22:19799301-19824980 Sample_02_0872 Colon HCT116_siCtrl-5FU 349 10 834 55 3 112 569 GNB1L,C22ORF29,TBX1
SE_02_021600659 chr22:19800610-19822539 Sample_02_0216 Skin NHEK_scramble 659 6 705 45 2 71 569 GNB1L,TBX1,C22ORF29
SE_02_072500547 chr22:19804913-19807557 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 547 2 108 7 2 24 90 GNB1L,C22ORF29,TBX1
SE_02_098700492 chr22:19806777-19828518 Sample_02_0987 Blood K562_Control_1 492 5 667 41 0 45 381 GNB1L,C22ORF29,GP1BB,C22orf29
SE_02_098800209 chr22:19806816-19828402 Sample_02_0988 Blood K562_EPZ 209 5 662 41 0 42 378 GNB1L,C22ORF29,GP1BB,C22orf29
SE_02_142200239 chr22:19815847-19828178 Sample_02_1422 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_0h 239 4 390 25 0 25 239 GNB1L,C22ORF29,GP1BB,C22orf29
SE_02_147000705 chr22:19835315-19856468 Sample_02_1470 Umbilical Vein H441 705 4 599 68 1 71 1363 C22ORF29,GNB1L
SE_02_009600389 chr22:19841775-19856661 Sample_02_0096 Mammary gland ZR-75-1_1 389 2 429 53 0 68 1363 GNB1L,C22ORF29
SE_02_125300715 chr22:19841870-19857216 Sample_02_1253 Mammary gland CAMA1 ER+/FGFR1-amplified 715 1 445 55 1 68 1363 C22ORF29,GNB1L
SE_02_085300321 chr22:19841929-19856484 Sample_02_0853 Mammary gland MCF7L-TamR 321 3 418 51 0 68 1363 C22ORF29,GNB1L
SE_00_002200578 chr22:19842077-19856484 Sample_00_0022 Lung lung_30y 578 3 414 51 0 67 1363 GNB1L,C22ORF29,C22orf29,COT
SE_02_085200333 chr22:19842121-19856791 Sample_02_0852 Mammary gland MCF7L-P 333 5 425 51 0 67 1363 C22ORF29,GNB1L
SE_02_115900334 chr22:19842121-19856792 Sample_02_1159 Mammary gland MCF7 334 5 425 51 0 67 1363 C22ORF29,GNB1L
SE_02_040400266 chr22:19842167-19857229 Sample_02_0404 Mammary gland ZR-75-1_2 266 3 437 53 1 67 1363 GNB1L,C22ORF29
SE_02_076400595 chr22:19842787-19856919 Sample_02_0764 Prostate LNCaP_DHT_DMSO_6h 595 5 410 50 0 64 1363 C22ORF29,GNB1L
SE_02_062400439 chr22:19843446-19856648 Sample_02_0624 Mammary gland TAMR_VEH 439 4 382 50 0 44 1363 C22ORF29,GNB1L
SE_02_105200033 chr22:19843864-19854854 Sample_02_1052 Esophagus JH-EsoAd1 33 4 310 45 0 23 1306 C22ORF29,GNB1L
SE_02_035300246 chr22:19843903-19856595 Sample_02_0353 Colon HT29 246 2 371 48 0 44 1363 GNB1L,C22ORF29
SE_02_062300500 chr22:19844097-19856727 Sample_02_0623 Mammary gland TAMR_E2 500 3 371 48 0 44 1363 C22ORF29,GNB1L
SE_02_036100215 chr22:19847706-19856568 Sample_02_0361 Colon HT29_DMSO 215 2 253 35 0 38 1071 GNB1L,C22ORF29
SE_02_035500483 chr22:19848145-19856593 Sample_02_0355 Colon HCT15 483 1 246 35 0 37 1028 GNB1L,C22ORF29
SE_02_102900628 chr22:19848151-19856656 Sample_02_1029 Colon HCT116 628 2 248 35 0 37 1027 C22ORF29,GNB1L
SE_02_122900199 chr22:19848254-19859070 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 199 6 308 41 1 37 1015 C22ORF29,GNB1L,COMT,TXNRD2
SE_01_003900434 chr22:19850116-19856628 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 434 2 197 18 0 34 701 GNB1L,C22ORF29,COT,TXNRD2
SE_02_110600378 chr22:19851667-19856707 Sample_02_1106 Brain NGP 378 2 156 16 0 32 391 C22ORF29,GNB1L
Genomic distribution of SEs associated with C22ORF29
Genome Browser

The strength of the tissue affected by the gene

Expression of C22ORF29

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)