SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000100299
Gene: ARSA Gene type: protein_coding
Strand: - External links:
Genomic region: chr22:50622754-50628173 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_039601890 chr22:50603048-50642428 Sample_02_0396 Skin NHEK-D 1890 10 1231 159 3 160 2721 MAPK8IP2,ARSA,C22ORF41,CHKB,LOC100144603,CPT1B,SHANK3
SE_02_104602194 chr22:50607617-50642659 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2194 10 1100 147 3 104 1741 MAPK8IP2,ARSA,CHKB-AS1,SYCE3,CPT1B,CHKB,SHANK3
SE_02_104700900 chr22:50613030-50642286 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 900 8 913 124 3 78 1323 ARSA,CHKB-AS1,CPT1B,CHKB,MAPK8IP2,SHANK3
SE_02_104900773 chr22:50613094-50634082 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 773 13 657 94 3 70 1323 ARSA,CHKB-AS1,CPT1B,CHKB,MAPK8IP2,SHANK3
SE_02_016300304 chr22:50613254-50623663 Sample_02_0163 Prostate C4-2B_SR2211_24h 304 3 304 40 0 2 192 ARSA,CHKB,CPT1B,MAPK8IP2,LOC100144603
SE_02_093400681 chr22:50640143-50644373 Sample_02_0934 Embryo H7-WT 681 2 124 18 0 10 0 MAPK8IP2,SHANK3,ARSA
Genomic distribution of SEs associated with ARSA
Genome Browser

The strength of the tissue affected by the gene

Expression of ARSA

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)