SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000104880
Gene: ARHGEF18 Gene type: protein_coding
Strand: + External links:
Genomic region: chr19:7395113-7472484 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_099500189 chr19:7324618-7370097 Sample_02_0995 Blood MOLM-13_empty vector 189 16 1232 64 2 30 0 ARHGEF18,INSR
SE_02_104700077 chr19:7325961-7486228 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 77 89 5090 520 9 168 3303 PEX11G,ARHGEF18,LOC100128573,PNPLA6,INSR,MCOLN1,ZNF358,C19ORF45
SE_02_122700846 chr19:7325969-7381409 Sample_02_1227 Bone marrow U266 846 12 1601 90 2 30 0 ARHGEF18,INSR
SE_02_121900507 chr19:7328927-7361185 Sample_02_1219 Bone marrow H929 507 7 941 27 2 25 0 ARHGEF18,INSR
SE_02_099400183 chr19:7329175-7370292 Sample_02_0994 Blood MOLM13_SIK3TQ 183 13 1241 53 2 30 0 ARHGEF18,INSR
SE_01_006700143 chr19:7331634-7408894 Sample_01_0067 Peritoneal effusion: derived from metastatic site: peritoneal cavity SUDHL6 143 7 2400 115 2 30 329 ARHGEF18
SE_02_012300080 chr19:7331733-7351456 Sample_02_0123 Haematopoietic and lymphoid tissue GRANTA-519 80 2 630 18 1 13 0 ARHGEF18
SE_02_036300092 chr19:7331939-7350866 Sample_02_0363 Haematopoietic and lymphoid tissue 697 92 3 608 18 1 13 0 ARHGEF18
SE_02_084100615 chr19:7332179-7384419 Sample_02_0841 Blood THP-1_untr 615 9 1661 83 2 30 171 ARHGEF18,INSR
SE_02_109800170 chr19:7332294-7370233 Sample_02_1098 Blood THP1_DMSO_noPMA 170 13 1214 52 2 30 0 ARHGEF18,INSR
SE_02_106900364 chr19:7332478-7360786 Sample_02_1069 Bone marrow Bone marrow aspirate 364 10 902 26 2 25 0 ARHGEF18,INSR
SE_02_057400367 chr19:7332565-7370098 Sample_02_0574 Blood MOLM-13_sgNeg2 367 13 1202 51 2 30 0 ARHGEF18,INSR
SE_02_033200474 chr19:7332567-7370250 Sample_02_0332 Haematopoietic and lymphoid tissue MOLM14_DMSO_9 474 5 1209 52 2 30 0 ARHGEF18
SE_02_036000248 chr19:7332576-7350854 Sample_02_0360 Haematopoietic and lymphoid tissue SEM 248 4 592 18 1 13 0 ARHGEF18
SE_02_133100283 chr19:7332583-7369649 Sample_02_1331 Blood Molm13_CTRL 283 10 1183 48 2 30 0 ARHGEF18,INSR
SE_02_099300218 chr19:7332654-7369783 Sample_02_0993 Blood MOLM-13_empty 218 15 1188 49 2 30 0 ARHGEF18,INSR
SE_01_005300313 chr19:7332691-7352184 Sample_01_0053 Haematopoietic and lymphoid tissue OCI-LY1 313 2 639 20 1 13 0 ARHGEF18
SE_02_017600336 chr19:7332695-7352427 Sample_02_0176 Peripheral blood LOUCY 336 3 646 20 1 13 0 ARHGEF18
SE_02_057700261 chr19:7332730-7370224 Sample_02_0577 Blood MOLM13_empty 261 7 1201 52 2 30 0 ARHGEF18,INSR
SE_02_014400248 chr19:7332732-7370415 Sample_02_0144 Peripheral blood MV411_DMSO 248 5 1212 52 2 30 0 ARHGEF18
SE_02_012200136 chr19:7332735-7351641 Sample_02_0122 Haematopoietic and lymphoid tissue TOLEDO 136 2 615 18 1 13 0 ARHGEF18
SE_02_058200252 chr19:7332784-7370214 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 252 8 1200 52 2 30 0 ARHGEF18,INSR
SE_02_058100391 chr19:7332867-7370039 Sample_02_0581 Blood MOLM13_empty_HG 391 7 1191 51 2 30 0 ARHGEF18,INSR
SE_02_057500552 chr19:7332939-7369926 Sample_02_0575 Blood MOLM13_sgLKB1e2 552 9 1184 51 2 30 0 ARHGEF18,INSR
SE_02_021300250 chr19:7332963-7355434 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 250 1 740 22 1 14 0 ARHGEF18
SE_01_005500219 chr19:7332981-7366968 Sample_01_0055 Haematopoietic and lymphoid tissue OCI-LY7 219 5 1082 38 2 30 0 ARHGEF18
SE_02_057800451 chr19:7333024-7370127 Sample_02_0578 Blood MOLM-13_sgSIK3e4 451 11 1191 51 2 30 0 ARHGEF18,INSR
SE_02_075800110 chr19:7333075-7379755 Sample_02_0758 Peripheral blood REH 110 22 1508 77 2 30 0 ARHGEF18,INSR
SE_02_025600384 chr19:7333093-7385509 Sample_02_0256 Peripheral blood MV411 384 11 1674 85 2 30 171 ARHGEF18
SE_02_025500115 chr19:7333107-7399511 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 115 15 2078 103 2 30 329 ARHGEF18
SE_01_008400637 chr19:7333119-7363031 Sample_01_0084 Spleen spleen 637 5 954 29 2 29 0 ARHGEF18
SE_00_003900598 chr19:7333231-7350984 Sample_00_0039 Spleen spleen_3y 598 4 580 18 1 13 0 ARHGEF18,C19orf45,INSR,PNPLA6
SE_01_002000595 chr19:7334386-7364648 Sample_01_0020 Blood B-cell 595 7 973 30 2 29 0 ARHGEF18
SE_02_038700277 chr19:7334890-7351343 Sample_02_0387 Lymph node CD19+_B_cells_nhl_FL1-2 277 12 556 18 1 13 0 ARHGEF18,PEX11G
SE_01_004400419 chr19:7335243-7351189 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 419 2 543 18 1 13 0 ARHGEF18
SE_02_045900683 chr19:7335461-7354338 Sample_02_0459 Blood ME-1_DMSO_6h 683 8 647 20 1 13 0 ARHGEF18,INSR
SE_02_075000187 chr19:7335504-7354867 Sample_02_0750 Lymphoma Rec-1_GSI 187 13 668 21 1 14 0 ARHGEF18,INSR
SE_02_012100163 chr19:7335629-7354759 Sample_02_0121 Haematopoietic and lymphoid tissue SUDHL-4 163 3 658 19 1 14 0 ARHGEF18
SE_02_033300399 chr19:7335768-7351579 Sample_02_0333 Haematopoietic and lymphoid tissue MOLM14_DMSO_10 399 2 534 17 1 13 0 ARHGEF18
SE_02_028800131 chr19:7335778-7350901 Sample_02_0288 Tonsil CB5_H3K27Ac 131 3 506 17 1 13 0 ARHGEF18
SE_00_000500233 chr19:7335851-7352539 Sample_00_0005 Blood B-cell 233 4 560 19 1 13 0 ARHGEF18
SE_02_034300654 chr19:7336026-7351442 Sample_02_0343 Bone marrow HSPC_A0 654 6 513 16 1 13 0 ARHGEF18
SE_02_083700561 chr19:7336146-7354316 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 561 8 612 18 1 13 0 ARHGEF18,INSR
SE_02_083300798 chr19:7336309-7354380 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 798 7 607 18 1 13 0 ARHGEF18,INSR
SE_01_010900923 chr19:7336319-7399479 Sample_01_0109 Colon transverse colon_54y 923 15 1981 101 2 30 329 ARHGEF18,INSR
SE_02_104300208 chr19:7336356-7429861 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 208 45 3013 277 5 40 329 ARHGEF18,INSR,LOC100128573
SE_02_046400077 chr19:7336430-7360710 Sample_02_0464 Bone marrow MOLM-13 77 13 786 23 2 25 0 ARHGEF18,INSR
SE_02_046100355 chr19:7336742-7369908 Sample_02_0461 Blood MV-4-11-B cells 355 11 1072 48 2 26 0 ARHGEF18,INSR
SE_02_002500333 chr19:7336924-7367370 Sample_02_0025 Blood CD19donorA 333 13 975 37 2 25 0 ARHGEF18
SE_02_134500582 chr19:7337167-7371063 Sample_02_1345 Leukophereses leukophereses_p358 582 10 1110 50 2 25 0 ARHGEF18,INSR
SE_02_104800389 chr19:7337375-7383179 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 389 21 1476 78 2 25 119 ARHGEF18,INSR
SE_02_082700699 chr19:7339959-7352454 Sample_02_0827 Stomach normal gastric 699 5 423 14 1 5 0 ARHGEF18,INSR
SE_02_002200732 chr19:7344742-7368271 Sample_02_0022 Blood CD8donorA 732 13 733 32 2 22 0 ARHGEF18
SE_02_076600956 chr19:7360396-7399342 Sample_02_0766 Ovary PEO1 956 11 1199 77 0 5 329 ARHGEF18
SE_02_048101260 chr19:7368062-7401810 Sample_02_0481 Mammary gland MDA-MB231 1260 6 1031 66 0 0 329 ARHGEF18
SE_00_005300700 chr19:7368088-7392132 Sample_00_0053 Embryo trophoblast cell originated from H1 700 8 765 44 0 0 171 ARHGEF18
SE_02_102500874 chr19:7368310-7399313 Sample_02_1025 Esophagus KYSE150 874 6 969 61 0 0 329 ARHGEF18
SE_02_116900167 chr19:7368549-7435987 Sample_02_1169 Biliary H69_TGF beta_16h_2 167 21 2183 271 3 18 329 ARHGEF18,LOC100128573
SE_02_135100929 chr19:7368611-7399882 Sample_02_1351 Mammary gland MDA-MB-231-Erbeta_vehicle 929 5 978 61 0 0 329 ARHGEF18
SE_02_113200519 chr19:7368911-7428312 Sample_02_1132 Pancreas KLM1 wt 519 17 1921 224 3 10 329 ARHGEF18,LOC100128573
SE_02_103200143 chr19:7369015-7445400 Sample_02_1032 Head and neck SCC1 JQ1 143 21 2476 341 4 52 748 ARHGEF18,PEX11G,LOC100128573
SE_02_103100139 chr19:7369028-7436618 Sample_02_1031 Head and neck SCC1 contol 139 26 2185 271 3 18 329 ARHGEF18,LOC100128573
SE_02_099100688 chr19:7369135-7400371 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 688 5 963 59 0 0 329 ARHGEF18
SE_02_082600299 chr19:7369585-7436512 Sample_02_0826 Stomach gastric tumor 299 21 2143 267 3 18 329 ARHGEF18,LOC100128573
SE_02_050600665 chr19:7373649-7429437 Sample_02_0506 Esophagus TE5_1 665 14 1788 220 3 10 329 ARHGEF18,LOC100128573
SE_02_051700611 chr19:7373674-7433442 Sample_02_0517 Esophagus TE5 611 14 1903 236 3 15 329 ARHGEF18,LOC100128573
SE_02_012400245 chr19:7375318-7411644 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 245 6 1078 68 0 0 329 ARHGEF18
SE_02_039601065 chr19:7375421-7442151 Sample_02_0396 Skin NHEK-D 1065 15 2116 305 4 42 634 ARHGEF18,PEX11G,LOC100128573
SE_02_136200322 chr19:7375474-7427507 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 322 12 1642 196 3 10 329 ARHGEF18,LOC100128573
SE_02_136100346 chr19:7375534-7427625 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 346 11 1643 198 3 10 329 ARHGEF18,LOC100128573
SE_04_001000470 chr19:7380164-7400734 Sample_04_0010 Lung A549 TGFb 470 5 597 26 0 0 329 ARHGEF18
SE_02_116800147 chr19:7385518-7434700 Sample_02_1168 Biliary H69_TGF Vehicle_2 147 19 1582 215 3 18 158 ARHGEF18,LOC100128573
SE_02_116700164 chr19:7385547-7433824 Sample_02_1167 Biliary H69_TGF Vehicle_1 164 13 1546 211 3 15 158 ARHGEF18,LOC100128573
SE_02_116600165 chr19:7385679-7435659 Sample_02_1166 Biliary H69_TGF beta_16h_1 165 20 1610 227 3 18 158 ARHGEF18,LOC100128573
SE_02_000600304 chr19:7385770-7386054 Sample_02_0006 Cervical cervical-cancer_parental 304 1 4 0 0 0 0 ARHGEF18
SE_02_136000773 chr19:7386125-7427459 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 773 13 1335 174 3 10 158 ARHGEF18,LOC100128573
SE_02_098900941 chr19:7386436-7427269 Sample_02_0989 Kidney kidney cortex_WT 941 11 1323 174 3 10 158 ARHGEF18,LOC100128573
SE_02_154000323 chr19:7386544-7428522 Sample_02_1540 Nasopharyngeal HK1 323 11 1361 185 3 10 158 ARHGEF18,LOC100128573
SE_01_010100988 chr19:7387572-7427142 Sample_01_0101 Pancreas pancreas_54y 988 12 1266 173 3 10 158 ARHGEF18,LOC100128573,CAMSAP3
SE_02_047600955 chr19:7389555-7400074 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 955 6 301 18 0 0 158 ARHGEF18
SE_02_064400515 chr19:7389616-7398889 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 515 4 267 15 0 0 158 ARHGEF18
SE_02_105400492 chr19:7389763-7399432 Sample_02_1054 Esophagus SKGT4 492 4 274 17 0 0 158 ARHGEF18
SE_02_064700450 chr19:7389785-7427382 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 450 11 1213 173 3 10 158 ARHGEF18,LOC100128573
SE_02_064800788 chr19:7390015-7427198 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 788 9 1195 172 3 10 158 ARHGEF18,LOC100128573
SE_02_071301243 chr19:7390062-7426741 Sample_02_0713 Pancreas BxPC3_sgTP63 1243 14 1183 168 3 10 158 ARHGEF18,LOC100128573
SE_02_048000683 chr19:7390109-7427087 Sample_02_0480 Gingival epithelial HGEP 683 12 1192 172 3 10 158 ARHGEF18,LOC100128573,PEX11G,PNPLA6,ZNF358
SE_04_000300316 chr19:7390112-7399355 Sample_04_0003 Lung A549 TEAD4 shRNA TGFb 316 5 261 17 0 0 158 ARHGEF18
SE_02_064500470 chr19:7390213-7426817 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 470 9 1181 169 3 10 158 ARHGEF18,LOC100128573
SE_02_065201176 chr19:7390264-7399374 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 1176 6 258 17 0 0 158 ARHGEF18
SE_02_064900682 chr19:7390305-7426757 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 682 9 1178 168 3 10 158 ARHGEF18,LOC100128573
SE_02_135400765 chr19:7390382-7399637 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 765 3 263 17 0 0 158 ARHGEF18
SE_02_070400524 chr19:7390542-7399447 Sample_02_0704 Pancreas HPAFII WT 524 5 252 17 0 0 158 ARHGEF18
SE_02_135200595 chr19:7390584-7399745 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 595 3 264 17 0 0 158 ARHGEF18
SE_02_126100863 chr19:7390611-7399391 Sample_02_1261 Bone Im-GCT-3504_G34W_unedited 863 3 252 17 0 0 158 ARHGEF18
SE_02_015000817 chr19:7390626-7401231 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 817 2 297 22 0 0 158 ARHGEF18
SE_02_053000941 chr19:7390640-7427416 Sample_02_0530 Mammary gland MCF10A 941 10 1192 173 3 10 158 ARHGEF18,LOC100128573
SE_02_065000562 chr19:7390678-7426203 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 562 8 1150 162 3 9 158 ARHGEF18,LOC100128573
SE_02_064600289 chr19:7390684-7426221 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 289 6 1152 162 3 9 158 ARHGEF18,LOC100128573
SE_02_135300814 chr19:7390706-7399665 Sample_02_1353 Mammary gland MDA-MB-231-Erbeta_TNFa 814 2 257 17 0 0 158 ARHGEF18
SE_02_126901010 chr19:7390756-7399936 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 1010 2 265 18 0 0 158 ARHGEF18
SE_02_065800285 chr19:7390792-7398635 Sample_02_0658 Tracheobronchial epithelial HTBE_H5N1_18h 285 3 219 15 0 0 158 ARHGEF18
SE_02_099000472 chr19:7390821-7400393 Sample_02_0990 Breast cancer brain metastatic variant MDA-MB-231 BrM2 472 3 272 18 0 0 158 ARHGEF18
SE_02_052400514 chr19:7391020-7425725 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 514 9 1125 162 3 9 158 ARHGEF18,LOC100128573
SE_02_122800795 chr19:7391091-7400667 Sample_02_1228 Mammary gland MDA-MB-231_2 795 5 270 18 0 0 158 ARHGEF18
SE_02_093900455 chr19:7391101-7400174 Sample_02_0939 Mammary gland MDA-MB-231_control 455 2 255 18 0 0 158 ARHGEF18
SE_02_061001522 chr19:7391110-7400705 Sample_02_0610 Liposarcoma MLS 1765-92 1522 3 271 18 0 0 158 ARHGEF18
SE_02_154100788 chr19:7410843-7433348 Sample_02_1541 Nasopharyngeal HNE1 788 10 784 167 3 15 0 ARHGEF18,LOC100128573
Genomic distribution of SEs associated with ARHGEF18
Genome Browser

The strength of the tissue affected by the gene

Expression of ARHGEF18

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)