SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000165272
Gene: AQP3 Gene type: protein_coding
Strand: - External links:
Genomic region: chr9:33441156-33447596 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_077000969 chr9:33389842-33460859 Sample_02_0770 Ovary OVCA429_shLuc 969 24 2202 266 6 224 1307 AQP3,AQP7,MIR6851,NOL6
SE_02_002100976 chr9:33390461-33460135 Sample_02_0021 Colon V429 976 10 2155 262 6 221 1307 AQP7,AQP3,NOL6
SE_02_115900591 chr9:33390760-33466745 Sample_02_1159 Mammary gland MCF7 591 25 2376 276 6 297 2297 AQP3,AQP7,NOL6,SUGT1P1,MIR6851
SE_02_154100288 chr9:33390796-33464910 Sample_02_1541 Nasopharyngeal HNE1 288 23 2311 272 6 259 1929 AQP3,AQP7,NOL6,SUGT1P1,MIR6851
SE_02_082600335 chr9:33393168-33464244 Sample_02_0826 Stomach gastric tumor 335 27 2227 265 6 251 1872 AQP3,AQP7,NOL6,SUGT1P1,MIR6851
SE_02_085300409 chr9:33403759-33466806 Sample_02_0853 Mammary gland MCF7L-TamR 409 18 1976 243 6 280 1795 AQP3,NOL6,AQP7,SUGT1P1,MIR6851
SE_02_040400514 chr9:33403778-33453327 Sample_02_0404 Mammary gland ZR-75-1_2 514 7 1562 201 5 182 795 AQP3,AQP7,NOL6
SE_02_039600718 chr9:33403912-33474373 Sample_02_0396 Skin NHEK-D 718 14 2206 262 6 355 2723 NOL6,AQP3,SUGT1P1,AQP7
SE_02_104900151 chr9:33404394-33471297 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 151 39 2091 254 6 344 2501 AQP3,MIR6851,NOL6,AQP7,SUGT1P1
SE_02_104200094 chr9:33404781-33459820 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 94 15 1689 222 6 203 795 AQP3,AQP7,MIR6851,NOL6
SE_02_006300527 chr9:33407308-33465835 Sample_02_0063 Skin Keratinocytes 527 10 1834 231 5 254 1592 NOL6,AQP3,SUGT1P1,AQP7
SE_02_088600877 chr9:33407777-33462482 Sample_02_0886 Skin foreskin_ p63KLF4 877 16 1707 226 5 196 1008 AQP3,NOL6,AQP7,SUGT1P1,MIR6851
SE_02_076500451 chr9:33412827-33448428 Sample_02_0765 Prostate 22RV1-DHT-DMSO_6h 451 5 1098 156 4 141 795 AQP3,AQP7,MIR6851,NOL6
SE_02_010500416 chr9:33413888-33465127 Sample_02_0105 Skin neonatal_keratinocytes 416 6 1597 206 5 219 1461 NOL6,AQP3,SUGT1P1,AQP7
SE_00_001100077 chr9:33413903-33462984 Sample_00_0011 Esophagus esophagus 77 11 1524 203 5 189 1100 NOL6,AQP3,SUGT1P1,AQP7
SE_02_081900780 chr9:33414063-33459316 Sample_02_0819 Ovary Mucinous ovarian cancer 780 9 1395 191 5 177 795 AQP3,AQP7,MIR6851,NOL6
SE_01_010700228 chr9:33414115-33465241 Sample_01_0107 Esophagus esophagus squamous epithelium 228 12 1591 205 5 222 1489 AQP3,NOL6,AQP7,SUGT1P1,MIR6851,ANKRD18B
SE_02_071100350 chr9:33414116-33459768 Sample_02_0711 Pancreas hN35_organoid 350 16 1400 191 5 178 795 AQP3,AQP7,MIR6851,NOL6
SE_01_007501002 chr9:33414154-33464539 Sample_01_0075 Esophagus squamous epithelium esophagus-squamous-epithelium 1002 10 1574 202 5 215 1386 NOL6,AQP3,SUGT1P1,AQP7
SE_00_004100430 chr9:33414215-33462569 Sample_00_0041 Stomach stomach_3y 430 9 1492 199 5 187 1027 NOL6,AQP3,SUGT1P1,AQP7
SE_02_109900661 chr9:33414245-33453926 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 661 16 1241 168 4 159 795 AQP3,AQP7,MIR6851,NOL6,ANKRD18B
SE_02_047600456 chr9:33414570-33440338 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 456 12 825 126 4 66 0 AQP3,AQP7,MIR6851,NOL6
SE_02_125400371 chr9:33414689-33465030 Sample_02_1254 Bladder Bladder tumor Basal1 371 15 1571 200 5 219 1438 AQP3,NOL6,AQP7,SUGT1P1,MIR6851
SE_02_047500745 chr9:33414708-33459195 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 745 13 1373 186 5 177 795 AQP3,AQP7,MIR6851,NOL6
SE_02_053000737 chr9:33414924-33465303 Sample_02_0530 Mammary gland MCF10A 737 18 1571 199 5 224 1500 AQP3,NOL6,AQP7,SUGT1P1,MIR6851
SE_02_122900661 chr9:33415344-33472414 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 661 30 1789 216 5 319 2594 AQP3,MIR6851,NOL6,AQP7,SUGT1P1,ANKRD18B
SE_01_003600391 chr9:33430590-33461043 Sample_01_0036 Cervix HeLa-S3 391 6 925 99 1 138 795 AQP3,AQP7,NOL6,ANKRD18B,SUGT1P1
SE_02_078000682 chr9:33430676-33465487 Sample_02_0780 Liver SMMC-7721 682 6 1074 107 1 182 1531 AQP3,NOL6,AQP7,SUGT1P1,MIR6851
SE_02_151000402 chr9:33430882-33472992 Sample_02_1510 Lung H3122_LR_Pano 402 14 1306 123 1 279 2616 AQP3,MIR6851,NOL6,AQP7,SUGT1P1
SE_02_087300234 chr9:33434703-33458563 Sample_02_0873 Colon HCT116_siGLIS2.1-5FU 234 4 713 77 1 117 795 AQP3,AQP7,MIR6851,NOL6
SE_02_087200284 chr9:33435765-33460335 Sample_02_0872 Colon HCT116_siCtrl-5FU 284 6 741 83 1 132 795 AQP3,AQP7,MIR6851,NOL6
SE_02_042300279 chr9:33436031-33472798 Sample_02_0423 Skin A375 279 12 1138 109 1 277 2616 NOL6,AQP3,SUGT1P1,AQP7
SE_02_006800270 chr9:33436369-33472591 Sample_02_0068 Skin A375_DMSO 270 12 1116 107 1 275 2616 NOL6,AQP3,SUGT1P1,AQP7
SE_02_029400224 chr9:33436405-33472720 Sample_02_0294 Pancreatic L3-6_DMSO 224 5 1121 107 1 275 2616 NOL6,AQP3,SUGT1P1,AQP7
SE_02_035500208 chr9:33437826-33475059 Sample_02_0355 Colon HCT15 208 6 1130 104 1 270 2723 NOL6,AQP3,SUGT1P1,AQP7
SE_02_122400622 chr9:33437981-33471428 Sample_02_1224 Bone marrow normal plasma cell 622 20 1033 98 1 259 2501 AQP3,MIR6851,NOL6,AQP7,SUGT1P1
SE_02_113100352 chr9:33438922-33465323 Sample_02_1131 Pancreas T3M4 wt 352 20 802 79 1 165 1502 AQP3,NOL6,AQP7,SUGT1P1,MIR6851
SE_02_136600859 chr9:33439522-33465448 Sample_02_1366 Pancreas BxPC3-untreated 859 14 789 77 1 166 1528 AQP3,NOL6,AQP7,SUGT1P1,MIR6851
SE_02_066100974 chr9:33439573-33472443 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 974 14 1015 95 1 263 2601 AQP3,MIR6851,NOL6,AQP7,SUGT1P1
SE_02_130500242 chr9:33440210-33465452 Sample_02_1305 Pancreas Gemcitabine resistant L3.6pl 242 14 765 76 1 161 1529 AQP3,NOL6,AQP7,SUGT1P1,MIR6851
SE_02_104400261 chr9:33441908-33459748 Sample_02_1044 Peripheral blood CD4+ cells_CTCL409 261 5 516 59 1 111 635 AQP3,AQP7,MIR6851,NOL6
SE_02_016500609 chr9:33442207-33474052 Sample_02_0165 Lung H2087_LCC2 609 4 982 95 1 259 2477 NOL6,AQP3,SUGT1P1,AQP7
SE_02_072500223 chr9:33442402-33465420 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 223 10 705 72 1 148 1240 AQP3,NOL6,AQP7,SUGT1P1,MIR6851
SE_02_021500302 chr9:33442592-33455268 Sample_02_0215 Skin NHEK_siGRHL3 302 2 383 41 1 80 465 AQP3,AQP7,NOL6
SE_00_004500284 chr9:33443215-33459897 Sample_00_0045 Thymus thymus 284 6 479 54 1 86 341 AQP3,AQP7,NOL6
SE_02_094800906 chr9:33443298-33465475 Sample_02_0948 Pharyng Detroit562 906 5 675 67 1 132 1054 AQP3,NOL6,AQP7,SUGT1P1,MIR6851
SE_02_022700041 chr9:33443338-33466835 Sample_02_0227 Oesophagus TE7 41 13 725 70 1 161 1320 NOL6,AQP3,SUGT1P1,AQP7
SE_02_050700049 chr9:33443364-33466728 Sample_02_0507 Esophagus TE7_1 49 15 720 70 1 159 1294 AQP3,NOL6,AQP7,SUGT1P1,MIR6851
SE_02_122700258 chr9:33443803-33460368 Sample_02_1227 Bone marrow U266 258 6 491 58 1 77 215 AQP3,AQP7,MIR6851,NOL6
SE_02_104100084 chr9:33443820-33465913 Sample_02_1041 Peripheral blood CD4+ cells_CTCL1135 84 14 672 68 1 131 1024 AQP3,NOL6,AQP7,SUGT1P1,MIR6851
SE_02_122100546 chr9:33445265-33459689 Sample_02_1221 Bone marrow KMS11 546 7 423 49 1 69 162 AQP3,AQP7,MIR6851,NOL6
Genomic distribution of SEs associated with AQP3
Genome Browser

The strength of the tissue affected by the gene

Expression of AQP3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)