Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000173744 |
| Gene: | AGFG1 | Gene type: | protein_coding |
| Strand: | + | External links: |
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| Genomic region: | chr2:227472152-227561217 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_030800241 | chr2:227445371-227467706 |
Sample_02_0308 | Neuroblastoma | SJNB1 | 241 | 4 | 619 | 81 | 0 | 49 | 0 | AGFG1 |
| SE_03_001300645 | chr2:227445454-227475514 |
Sample_03_0013 | Lung | A549 | 645 | 3 | 800 | 100 | 0 | 78 | 228 | AGFG1 |
| SE_03_000800479 | chr2:227445736-227475954 |
Sample_03_0008 | Lung | A549_dexamethasone_7h | 479 | 4 | 805 | 100 | 0 | 79 | 228 | AGFG1 |
| SE_03_000900641 | chr2:227445849-227475603 |
Sample_03_0009 | Lung | A549_dexamethasone_3h | 641 | 3 | 790 | 100 | 0 | 78 | 228 | AGFG1 |
| SE_02_077600099 | chr2:227445868-227513593 |
Sample_02_0776 | Pancreas | EndoC-BH1 | 99 | 11 | 1774 | 196 | 1 | 107 | 246 | AGFG1,MIR5703 |
| SE_03_001600382 | chr2:227445925-227476381 |
Sample_03_0016 | Lung | A549_dexamethasone_6h | 382 | 3 | 813 | 102 | 0 | 79 | 228 | AGFG1 |
| SE_03_001400482 | chr2:227446070-227475531 |
Sample_03_0014 | Lung | A549_dexamethasone_2h | 482 | 3 | 782 | 100 | 0 | 78 | 228 | AGFG1 |
| SE_03_000400542 | chr2:227446115-227475827 |
Sample_03_0004 | Lung | A549_dexamethasone_4h | 542 | 3 | 786 | 100 | 0 | 79 | 228 | AGFG1 |
| SE_03_001500504 | chr2:227446210-227475527 |
Sample_03_0015 | Lung | A549_dexamethasone_8h | 504 | 5 | 780 | 100 | 0 | 78 | 228 | AGFG1 |
| SE_03_001000600 | chr2:227446311-227475652 |
Sample_03_0010 | Lung | A549_dexamethasone_1h | 600 | 3 | 776 | 99 | 0 | 79 | 228 | AGFG1 |
| SE_03_000500486 | chr2:227447086-227488862 |
Sample_03_0005 | Lung | A549_dexamethasone_0.5h | 486 | 6 | 1090 | 126 | 0 | 87 | 228 | AGFG1 |
| SE_01_000600464 | chr2:227447156-227512130 |
Sample_01_0006 | Lung | A549_ethanol_1h | 464 | 10 | 1703 | 183 | 1 | 100 | 246 | AGFG1 |
| SE_03_001100278 | chr2:227447160-227475476 |
Sample_03_0011 | Lung | A549_dexamethasone_5h | 278 | 3 | 751 | 92 | 0 | 75 | 228 | AGFG1 |
| SE_03_000700438 | chr2:227447181-227475504 |
Sample_03_0007 | Lung | A549_dexamethasone_12h | 438 | 4 | 751 | 92 | 0 | 74 | 228 | AGFG1 |
| SE_00_002000650 | chr2:227448339-227480638 |
Sample_00_0020 | Large intestine | large-intestine_108d | 650 | 7 | 828 | 96 | 0 | 76 | 228 | AGFG1 |
| SE_02_028500176 | chr2:227448976-227474324 |
Sample_02_0285 | Liver | HuH7_untreat | 176 | 3 | 655 | 81 | 0 | 71 | 228 | AGFG1 |
| SE_02_028600459 | chr2:227449181-227469282 |
Sample_02_0286 | Liver | HuH7_IL-1alpha_1h | 459 | 4 | 536 | 70 | 0 | 46 | 0 | AGFG1 |
| SE_00_003600689 | chr2:227449297-227475840 |
Sample_00_0036 | Small intestine | small-intestine_108days | 689 | 4 | 687 | 82 | 0 | 75 | 228 | AGFG1 |
| SE_02_013200556 | chr2:227450546-227481841 |
Sample_02_0132 | Lung | 1015_CL | 556 | 5 | 788 | 93 | 0 | 70 | 228 | AGFG1 |
| SE_02_103600745 | chr2:227451899-227526741 |
Sample_02_1036 | Mammary gland | HCC70_XY018 | 745 | 22 | 1938 | 205 | 3 | 109 | 341 | AGFG1,MIR5703 |
| SE_02_013100580 | chr2:227453600-227481802 |
Sample_02_0131 | Lung | 1015_PT | 580 | 5 | 710 | 87 | 0 | 59 | 228 | AGFG1 |
| SE_02_142900394 | chr2:227456057-227519921 |
Sample_02_1429 | Blood | GM12878_WT | 394 | 19 | 1669 | 178 | 3 | 83 | 252 | AGFG1,MIR5703,MFF |
| SE_02_023400638 | chr2:227459816-227556849 |
Sample_02_0234 | Tonsil | Th17 | 638 | 23 | 2564 | 261 | 6 | 209 | 739 | AGFG1 |
| SE_02_023200323 | chr2:227459943-227517514 |
Sample_02_0232 | Tonsil | ILC3 | 323 | 19 | 1479 | 149 | 3 | 81 | 246 | AGFG1 |
| SE_02_092900392 | chr2:227462227-227519747 |
Sample_02_0929 | Mid-gestation placenta | trophoblast__CytT | 392 | 38 | 1483 | 152 | 3 | 78 | 246 | AGFG1,MIR5703 |
| SE_02_143400335 | chr2:227465149-227520512 |
Sample_02_1434 | Trophoblast | trophoblast stem cells | 335 | 8 | 1418 | 142 | 3 | 74 | 277 | AGFG1,MIR5703 |
| SE_02_137801021 | chr2:227465968-227518495 |
Sample_02_1378 | Pancreas | Pancreatic_tumor_associated_fibroblasts_CAF08_untreated | 1021 | 22 | 1344 | 131 | 3 | 68 | 246 | AGFG1,MIR5703 |
Genomic distribution of SEs associated with AGFG1