Sample overview
| Species: | Human |
| Biosample type: | Cell line |
| Tissue type: | Breast |
| Data source: | NCBI GEO/SRA |
| Biosample name: | NEG Chronic D14 |
| Sample ID: | Sample_02_2869 |
| SE ID | SE Region | Size | Rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_286900001 | chr19:38647701-38698384 |
50683 | 1 | 10 | 1413 | 1434 | 6 | 106 | 103 | ACTN4,EIF3K,CAPN12,MAP4K1 |
| SE_02_286900002 | chr12:54394497-54439762 |
45265 | 2 | 14 | 1077 | 237 | 3 | 928 | 2267 | LOC102724050,ITGA5,GPR84,ZNF385A,GTSF1 |
| SE_02_286900003 | chr1:8004112-8138971 |
134859 | 3 | 32 | 3556 | 1585 | 7 | 292 | 552 | ERRFI1,PARK7 |
| SE_02_286900004 | chr5:14143727-14210088 |
66361 | 4 | 14 | 1798 | 106 | 7 | 180 | 166 | TRIO |
| SE_02_286900005 | chr9:21548307-21606481 |
58174 | 5 | 14 | 1720 | 173 | 9 | 160 | 153 | MIR31HG,MIR31 |
| SE_02_286900006 | chr15:60362076-60432870 |
70794 | 6 | 25 | 1873 | 656 | 7 | 319 | 823 | ANXA2,ICE2,RORA-AS1 |
| SE_02_286900007 | chr20:47314701-47335939 |
21238 | 7 | 5 | 577 | 18 | 0 | 20 | 407 | ZMYND8,LOC100131496 |
| SE_02_286900008 | chr22:36323658-36387984 |
64326 | 8 | 17 | 1884 | 403 | 7 | 141 | 886 | MYH9,MIR6819 |
| SE_02_286900009 | chr7:130881029-130918653 |
37624 | 9 | 13 | 1173 | 153 | 10 | 143 | 338 | LOC100506860,LINC-PINT,MIR29A,MIR29B1 |
| SE_02_286900010 | chr20:35301094-35321197 |
20103 | 10 | 6 | 441 | 802 | 12 | 20 | 777 | UQCC1,EIF6,FAM83C-AS1,MMP24-AS1,FAM83C |
| SE_02_286900011 | chr10:93435167-93482670 |
47503 | 11 | 14 | 1379 | 341 | 6 | 56 | 224 | MYOF,CEP55 |
| SE_02_286900012 | chr17:50027074-50066486 |
39412 | 12 | 11 | 1139 | 234 | 7 | 68 | 1051 | ITGA3,LOC284080,PDK2,DLX3 |
| SE_02_286900013 | chr11:122156138-122216040 |
59902 | 13 | 19 | 1577 | 15 | 5 | 209 | 142 | MIR100HG,MIR100,MIRLET7A2,BLID |
| SE_02_286900014 | chr14:61511299-61588694 |
77395 | 14 | 25 | 2179 | 298 | 28 | 234 | 1432 | LOC101927780,FLJ22447,PRKCH |
| SE_02_286900015 | chr20:47349449-47361649 |
12200 | 15 | 4 | 283 | 8 | 4 | 12 | 706 | ZMYND8,LOC100131496 |
| SE_02_286900016 | chr8:66512565-66536682 |
24117 | 16 | 5 | 717 | 53 | 1 | 51 | 406 | C8ORF46 |
| SE_02_286900017 | chr22:45504733-45554728 |
49995 | 17 | 10 | 1726 | 165 | 4 | 4 | 1240 | FBLN1 |
| SE_02_286900018 | chr7:101093396-101138587 |
45191 | 18 | 14 | 1389 | 871 | 7 | 4 | 1363 | SERPINE1,MIR4653,VGF,AP1S1,NAT16,TRIM56 |
| SE_02_286900019 | chr17:59824925-59847101 |
22176 | 19 | 7 | 481 | 266 | 0 | 19 | 194 | MIR21,VMP1,RPS6KB1,TUBD1 |
| SE_02_286900020 | chr20:51326982-51367198 |
40216 | 20 | 10 | 1288 | 18 | 0 | 194 | 0 | MIR3194 |
| SE_02_286900021 | chr7:116499696-116528814 |
29118 | 21 | 6 | 759 | 513 | 9 | 35 | 872 | CAV1,CAV2 |
| SE_02_286900022 | chr12:46367713-46404994 |
37281 | 22 | 11 | 1018 | 320 | 0 | 23 | 294 | SLC38A2,LOC100288798 |
| SE_02_286900023 | chr8:78196768-78232247 |
35479 | 23 | 10 | 856 | 63 | 0 | 45 | 0 | PKIA |
| SE_02_286900024 | chr5:139635985-139671992 |
36007 | 24 | 10 | 769 | 165 | 0 | 61 | 186 | CXXC5 |
| SE_02_286900025 | chr2:234949432-234999670 |
50238 | 25 | 18 | 1663 | 47 | 2 | 54 | 502 | SH3BP4 |
| SE_02_286900026 | chr12:124905073-124941273 |
36200 | 26 | 10 | 1258 | 107 | 4 | 56 | 1068 | MIR5188,UBC,SCARB1,DHX37 |
| SE_02_286900027 | chr11:65476190-65507299 |
31109 | 27 | 17 | 931 | 1305 | 3 | 160 | 935 | MALAT1,SCYL1,MIR612 |
| SE_02_286900028 | chr20:53579032-53596957 |
17925 | 28 | 3 | 434 | 23 | 1 | 21 | 431 | ZNF217,LOC101927770 |
| SE_02_286900029 | chr20:50414721-50451885 |
37164 | 29 | 11 | 1098 | 166 | 2 | 0 | 0 | PTPN1 |
| SE_02_286900030 | chr15:98852727-98915309 |
62582 | 30 | 15 | 2039 | 63 | 5 | 125 | 620 | IGF1R,MIR4714 |
| SE_02_286900031 | chr19:46856342-46914470 |
58128 | 31 | 13 | 1503 | 168 | 0 | 69 | 0 | SNAR-E,AP2S1,ARHGAP35 |
| SE_02_286900032 | chr1:42924434-42967922 |
43488 | 32 | 17 | 1271 | 653 | 5 | 30 | 1210 | SLC2A1-AS1,SLC2A1 |
| SE_02_286900033 | chr1:234598505-234617212 |
18707 | 33 | 8 | 514 | 86 | 2 | 0 | 751 | IRF2BP2,LOC101927787,LINC00184 |
| SE_02_286900034 | chr2:37761887-37809513 |
47626 | 34 | 17 | 1636 | 144 | 17 | 169 | 0 | LINC00211 |
| SE_02_286900035 | chr4:94507200-94560228 |
53028 | 35 | 16 | 1356 | 178 | 8 | 95 | 27 | PDLIM5 |
| SE_02_286900036 | chr3:152258804-152274215 |
15411 | 36 | 3 | 328 | 54 | 0 | 15 | 759 | MBNL1-AS1,MBNL1 |
| SE_02_286900037 | chr20:31690325-31723583 |
33258 | 37 | 14 | 737 | 545 | 4 | 32 | 289 | ABALON,BCL2L1,TPX2 |
| SE_02_286900038 | chr1:8873965-8904838 |
30873 | 38 | 5 | 936 | 192 | 0 | 114 | 370 | ENO1,ENO1-AS1,CA6,MIR6728 |
| SE_02_286900039 | chr6:35724082-35733567 |
9485 | 39 | 3 | 263 | 80 | 0 | 0 | 585 | LOC285847,FKBP5,CLPSL2,ARMC12,CLPSL1 |
| SE_02_286900040 | chr19:39397913-39411916 |
14003 | 40 | 5 | 338 | 104 | 0 | 74 | 1112 | ZFP36,MIR4530,MED29,PLEKHG2,SUPT5H,RPS16,PAF1 |
| SE_02_286900041 | chr2:201115760-201129292 |
13532 | 41 | 4 | 287 | 284 | 1 | 0 | 273 | CFLAR,CFLAR-AS1,FAM126B,NDUFB3 |
| SE_02_286900042 | chr12:52229833-52249739 |
19906 | 42 | 8 | 569 | 221 | 2 | 151 | 1129 | KRT7,KRT80,LINC00592,C12ORF80,KRT81 |
| SE_02_286900043 | chr3:134351912-134375451 |
23539 | 43 | 10 | 651 | 157 | 4 | 95 | 1673 | AMOTL2,MIR6827 |
| SE_02_286900044 | chr3:177801434-177837768 |
36334 | 44 | 12 | 1026 | 54 | 1 | 79 | 59 | KCCAT211 |
| SE_02_286900045 | chr11:65890674-65919057 |
28383 | 45 | 10 | 729 | 991 | 3 | 0 | 1357 | FOSL1,CCDC85B,C11ORF68,MUS81,SART1,TSGA10IP,CTSW,EFEMP2,DRAP1,FIBP,CFL1 |
| SE_02_286900046 | chr5:82386289-82415286 |
28997 | 46 | 9 | 728 | 416 | 5 | 76 | 38 | ATP6AP1L |
| SE_02_286900047 | chr1:156096768-156130338 |
33570 | 47 | 11 | 802 | 396 | 4 | 215 | 558 | LMNA,LAMTOR2,RAB25,UBQLN4,SEMA4A,MEX3A |
| SE_02_286900048 | chr10:72242870-72276933 |
34063 | 48 | 10 | 939 | 778 | 1 | 44 | 453 | DDIT4,ASCC1,ANAPC16 |
| SE_02_286900049 | chr19:2525021-2553316 |
28295 | 49 | 9 | 1032 | 108 | 1 | 0 | 0 | GNG7,GADD45B |
| SE_02_286900050 | chr12:108831129-108857599 |
26470 | 50 | 7 | 734 | 133 | 2 | 19 | 169 | SSH1,MIR619,DAO |
| SE_02_286900051 | chr5:14263350-14271605 |
8255 | 51 | 4 | 232 | 10 | 0 | 19 | 28 | TRIO |
| SE_02_286900052 | chr8:95784252-95809183 |
24931 | 52 | 9 | 654 | 37 | 1 | 47 | 101 | C8ORF37-AS1,LOC100500773 |
| SE_02_286900053 | chr5:150468859-150503832 |
34973 | 53 | 10 | 974 | 201 | 0 | 93 | 103 | LOC102546298,NDST1,RPS14 |
| SE_02_286900054 | chr5:149133728-149154950 |
21222 | 54 | 5 | 529 | 106 | 1 | 27 | 221 | ABLIM3 |
| SE_02_286900055 | chr1:223699214-223727273 |
28059 | 55 | 7 | 750 | 408 | 2 | 54 | 397 | CAPN2,CAPN8 |
| SE_02_286900056 | chr19:1244657-1267087 |
22430 | 56 | 9 | 858 | 126 | 1 | 254 | 1670 | ATP5D,MIDN,C19ORF24,CIRBP,CIRBP-AS1,STK11,CBARP,EFNA2 |
| SE_02_286900057 | chr8:121144845-121173520 |
28675 | 57 | 8 | 819 | 13 | 3 | 52 | 0 | SNTB1 |
| SE_02_286900058 | chr10:33237598-33292492 |
54894 | 58 | 14 | 1562 | 117 | 8 | 57 | 304 | NRP1 |
| SE_02_286900059 | chr15:72222686-72238415 |
15729 | 59 | 4 | 364 | 132 | 0 | 20 | 359 | PKM,GRAMD2,PARP6 |
| SE_02_286900060 | chr3:170724382-170754474 |
30092 | 60 | 7 | 699 | 320 | 6 | 51 | 115 | RPL22L1 |
| SE_02_286900061 | chr12:120228625-120265729 |
37104 | 61 | 11 | 938 | 382 | 0 | 124 | 197 | PXN,SIRT4,RNU4-1,GCN1,PXN-AS1,RPLP0,RNU4-2 |
| SE_02_286900062 | chr12:52144038-52153350 |
9312 | 62 | 5 | 298 | 34 | 0 | 10 | 0 | KRT80 |
| SE_02_286900063 | chr11:114150369-114181464 |
31095 | 63 | 15 | 873 | 18 | 12 | 50 | 94 | ZBTB16 |
| SE_02_286900064 | chr5:84361766-84384909 |
23143 | 64 | 7 | 553 | 18 | 0 | 19 | 172 | EDIL3 |
| SE_02_286900065 | chr2:160204681-160242513 |
37832 | 65 | 14 | 1048 | 290 | 4 | 71 | 81 | ITGB6,LOC100505984 |
| SE_02_286900066 | chr2:213215272-213241003 |
25731 | 66 | 5 | 682 | 69 | 2 | 61 | 0 | LOC100130451,SPAG16 |
| SE_02_286900067 | chr22:46071372-46082629 |
11257 | 67 | 1 | 336 | 23 | 1 | 27 | 0 | PRR34,MIR3619,LINC00899,PRR34-AS1,MIRLET7BHG,MIRLET7A3,MIR4763,MIRLET7B |
| SE_02_286900068 | chr1:218459644-218500385 |
40741 | 68 | 10 | 1027 | 50 | 23 | 31 | 0 | MIR548F3,TGFB2-OT1 |
| SE_02_286900069 | chr5:172765865-172778290 |
12425 | 69 | 7 | 389 | 74 | 1 | 9 | 549 | DUSP1,LOC101928093 |
| SE_02_286900070 | chr19:43753420-43785400 |
31980 | 70 | 8 | 928 | 999 | 4 | 1 | 1254 | SMG9,KCNN4,LYPD5,ZNF283,IRGC |
| SE_02_286900071 | chr7:5419487-5430274 |
10787 | 71 | 4 | 317 | 11 | 0 | 60 | 795 | TNRC18 |
| SE_02_286900072 | chr19:12777744-12794473 |
16729 | 72 | 6 | 382 | 208 | 1 | 119 | 489 | JUNB,MIR5684,BEST2,RTBDN,ASNA1,HOOK2,RNASEH2A,PRDX2,C19ORF43,MAST1 |
| SE_02_286900073 | chr19:2598708-2639501 |
40793 | 73 | 8 | 1348 | 136 | 0 | 0 | 0 | MIR7850,GNG7 |
| SE_02_286900074 | chr20:31592897-31610962 |
18065 | 74 | 6 | 601 | 724 | 4 | 83 | 381 | MIR3193,ID1,COX4I2,MCTS2P,HM13-AS1 |
| SE_02_286900075 | chr9:94899558-94938160 |
38602 | 75 | 8 | 1028 | 225 | 0 | 0 | 443 | C9ORF3,MIR2278,MIR6081 |
| SE_02_286900076 | chr20:41231688-41251325 |
19637 | 76 | 5 | 481 | 127 | 1 | 95 | 110 | ZHX3 |
| SE_02_286900077 | chr7:5688920-5696831 |
7911 | 77 | 4 | 274 | 42 | 0 | 17 | 316 | RNF216,RNF216-IT1,MIR6874 |
| SE_02_286900078 | chr7:81603652-81649906 |
46254 | 78 | 10 | 1071 | 5 | 1 | 202 | 80 | LOC100128317 |
| SE_02_286900079 | chr8:143935259-143951788 |
16529 | 79 | 5 | 573 | 593 | 2 | 0 | 1543 | PLEC,MIR661,PARP10,GRINA |
| SE_02_286900080 | chr7:116674168-116725030 |
50862 | 80 | 11 | 1218 | 146 | 6 | 57 | 313 | MET |
| SE_02_286900081 | chr3:141388605-141413331 |
24726 | 81 | 9 | 546 | 56 | 5 | 16 | 217 | ZBTB38 |
| SE_02_286900082 | chr3:152143894-152160393 |
16499 | 82 | 4 | 429 | 57 | 37 | 39 | 0 | MBNL1 |
| SE_02_286900083 | chr1:8169441-8212995 |
43554 | 83 | 8 | 1328 | 173 | 2 | 56 | 0 | LOC102724539 |
| SE_02_286900084 | chr8:127898397-127919792 |
21395 | 84 | 7 | 639 | 10 | 1 | 47 | 0 | PVT1,MIR1205,TMEM75 |
| SE_02_286900085 | chr11:1746252-1773594 |
27342 | 85 | 9 | 1031 | 159 | 1 | 69 | 1618 | IFITM10,CTSD,KRTAP5-6 |
| SE_02_286900086 | chr2:215428967-215439185 |
10218 | 86 | 5 | 254 | 78 | 11 | 38 | 389 | FN1,LOC102724849 |
| SE_02_286900087 | chr14:61695538-61713722 |
18184 | 87 | 9 | 453 | 69 | 1 | 50 | 176 | HIF1A,HIF1A-AS1,SNAPC1,HIF1A-AS2 |
| SE_02_286900088 | chr2:43218367-43229382 |
11015 | 88 | 3 | 373 | 54 | 0 | 5 | 1139 | LINC01126,ZFP36L2 |
| SE_02_286900089 | chr7:43635753-43660366 |
24613 | 89 | 9 | 641 | 1125 | 1 | 0 | 351 | COA1,STK17A |
| SE_02_286900090 | chr1:67710798-67760372 |
49574 | 90 | 9 | 1304 | 120 | 8 | 42 | 0 | GNG12,GADD45A |
| SE_02_286900091 | chr17:50195439-50221504 |
26065 | 91 | 8 | 752 | 124 | 3 | 57 | 965 | LOC101927230,COL1A1,SGCA,PPP1R9B,HILS1,TMEM92 |
| SE_02_286900092 | chr17:59782225-59788860 |
6635 | 92 | 2 | 127 | 97 | 0 | 5 | 0 | VMP1,MIR21 |
| SE_02_286900093 | chr17:40311084-40346021 |
34937 | 93 | 10 | 756 | 155 | 0 | 296 | 844 | RARA-AS1,RARA,CDC6,GJD3 |
| SE_02_286900094 | chr20:45336412-45360593 |
24181 | 94 | 9 | 646 | 452 | 4 | 30 | 137 | SDC4,SYS1,SYS1-DBNDD2,MATN4,DBNDD2,RBPJL,TP53TG5 |
| SE_02_286900095 | chr9:35906184-35937453 |
31269 | 95 | 5 | 847 | 589 | 2 | 76 | 617 | HRCT1,LINC00961,LINC00950,OR2S2,OR13J1 |
| SE_02_286900096 | chr1:85575334-85586021 |
10687 | 96 | 4 | 255 | 73 | 1 | 7 | 622 | CYR61,DDAH1 |
| SE_02_286900097 | chr10:91587762-91627579 |
39817 | 97 | 10 | 1129 | 810 | 4 | 43 | 100 | HECTD2-AS1,PPP1R3C |
| SE_02_286900098 | chr10:3774768-3785199 |
10431 | 98 | 4 | 318 | 21 | 2 | 21 | 911 | KLF6 |
| SE_02_286900099 | chr15:67097209-67128608 |
31399 | 99 | 10 | 915 | 125 | 7 | 9 | 79 | SMAD3 |
| SE_02_286900100 | chr8:38923601-38940179 |
16578 | 100 | 8 | 469 | 55 | 1 | 13 | 50 | PLEKHA2,HTRA4 |
| SE_02_286900101 | chr19:46955387-46985073 |
29686 | 101 | 10 | 772 | 126 | 1 | 25 | 0 | ARHGAP35,NPAS1 |
| SE_02_286900102 | chr3:141360726-141370656 |
9930 | 102 | 4 | 235 | 21 | 1 | 3 | 127 | ZBTB38 |
| SE_02_286900103 | chr2:237278850-237316080 |
37230 | 103 | 11 | 1205 | 41 | 4 | 24 | 0 | COL6A3 |
| SE_02_286900104 | chr17:42517744-42532397 |
14653 | 104 | 5 | 404 | 513 | 0 | 0 | 498 | ATP6V0A1,MLX,MIR548AT,PSMC3IP,COASY,MIR5010,NAGLU,HSD17B1 |
| SE_02_286900105 | chr17:75679377-75707723 |
28346 | 105 | 12 | 763 | 205 | 6 | 30 | 1006 | SAP30BP,SMIM5,ITGB4,SMIM6,RECQL5 |
| SE_02_286900106 | chr1:225651139-225659036 |
7897 | 106 | 3 | 184 | 24 | 0 | 1 | 252 | ENAH |
| SE_02_286900107 | chr16:53767661-53789801 |
22140 | 107 | 8 | 550 | 99 | 65 | 71 | 0 | FTO |
| SE_02_286900108 | chr14:49972084-50004063 |
31979 | 108 | 9 | 864 | 169 | 1 | 92 | 495 | LINC01588,MIR6076 |
| SE_02_286900109 | chr17:81509465-81516469 |
7004 | 109 | 3 | 405 | 216 | 1 | 0 | 608 | ACTG1,FSCN2,FAAP100 |
| SE_02_286900110 | chr10:72297550-72337256 |
39706 | 110 | 14 | 1127 | 1063 | 0 | 70 | 768 | DNAJB12,DDIT4 |
| SE_02_286900111 | chr11:62539029-62560539 |
21510 | 111 | 7 | 500 | 579 | 2 | 130 | 331 | AHNAK,MIR3654,EEF1G,TUT1,MTA2,MIR6747 |
| SE_02_286900112 | chr1:17545212-17570673 |
25461 | 112 | 11 | 741 | 32 | 0 | 63 | 0 | ARHGEF10L |
| SE_02_286900113 | chr4:156751087-156782717 |
31630 | 113 | 11 | 790 | 48 | 3 | 61 | 280 | PDGFC |
| SE_02_286900114 | chr20:53827056-53831067 |
4011 | 114 | 1 | 112 | 6 | 1 | 8 | 0 | SUMO1P1 |
| SE_02_286900115 | chr6:3910359-3920183 |
9824 | 115 | 5 | 320 | 228 | 1 | 15 | 0 | FAM50B |
| SE_02_286900116 | chr2:215680352-215714277 |
33925 | 116 | 10 | 888 | 93 | 1 | 74 | 0 | LINC00607,LCAL4 |
| SE_02_286900117 | chr5:67234325-67271015 |
36690 | 117 | 8 | 1089 | 8 | 0 | 85 | 0 | CD180,MAST4 |
| SE_02_286900118 | chr7:76291097-76305091 |
13994 | 118 | 7 | 460 | 376 | 0 | 9 | 433 | HSPB1 |
| SE_02_286900119 | chr17:40064494-40076249 |
11755 | 119 | 6 | 304 | 118 | 0 | 77 | 159 | THRA,CSF3,NR1D1,MSL1,MIR6884,MED24,SNORD124 |
| SE_02_286900120 | chr12:46769969-46787931 |
17962 | 120 | 6 | 453 | 68 | 2 | 52 | 303 | SLC38A4 |
| SE_02_286900121 | chr15:89809679-89848688 |
39009 | 121 | 10 | 1117 | 1013 | 11 | 64 | 979 | C15ORF38-AP3S2,ANPEP,AP3S2,MIR5009,MESP2,MIR5094 |
| SE_02_286900122 | chr2:37561314-37591150 |
29836 | 122 | 15 | 897 | 37 | 1 | 89 | 0 | CDC42EP3 |
| SE_02_286900123 | chr22:46064639-46071099 |
6460 | 123 | 1 | 160 | 20 | 0 | 12 | 0 | PRR34,MIR3619,LINC00899,PRR34-AS1,MIRLET7BHG,MIRLET7A3,MIR4763,MIRLET7B |
| SE_02_286900124 | chrX:45743093-45774929 |
31836 | 124 | 19 | 585 | 29 | 1 | 110 | 80 | MIR222,MIR221,LOC392452 |
| SE_02_286900125 | chr8:96096608-96105563 |
8955 | 125 | 6 | 234 | 10 | 2 | 0 | 0 | GDF6 |
| SE_02_286900126 | chr12:121796569-121805236 |
8667 | 126 | 4 | 237 | 132 | 0 | 4 | 1001 | SETD1B,LINC01089,RHOF |
| SE_02_286900127 | chr6:35585918-35606653 |
20735 | 127 | 8 | 541 | 194 | 1 | 32 | 207 | FKBP5,MIR5690 |
| SE_02_286900128 | chr15:51107811-51144773 |
36962 | 128 | 8 | 948 | 534 | 2 | 16 | 0 | TNFAIP8L3 |
| SE_02_286900129 | chr11:12065870-12090873 |
25003 | 129 | 9 | 806 | 476 | 3 | 49 | 0 | MICAL2 |
| SE_02_286900130 | chr9:129481789-129498433 |
16644 | 130 | 3 | 455 | 46 | 0 | 40 | 390 | LINC00963 |
| SE_02_286900131 | chr16:3020304-3024312 |
4008 | 131 | 1 | 127 | 39 | 0 | 45 | 958 | THOC6,TNFRSF12A,HCFC1R1,LOC100128770,CLDN9,PKMYT1,IL32,MMP25,MMP25-AS1,CLDN6,LOC101929613,LINC00514,CCDC64B |
| SE_02_286900132 | chr16:84984772-85005450 |
20678 | 132 | 8 | 772 | 309 | 3 | 3 | 212 | ZDHHC7,KIAA0513 |
| SE_02_286900133 | chr19:13838492-13862349 |
23857 | 133 | 15 | 646 | 205 | 1 | 11 | 0 | NANOS3,C19ORF57,LOC284454,MIR23A,ZSWIM4,MIR27A,MIR24-2,MIR181D,MIR181C,CC2D1A |
| SE_02_286900134 | chr14:61462107-61478826 |
16719 | 134 | 9 | 501 | 87 | 6 | 17 | 35 | PRKCH,LOC101927780 |
| SE_02_286900135 | chr5:172858177-172887879 |
29702 | 135 | 7 | 887 | 44 | 4 | 17 | 967 | ERGIC1 |
| SE_02_286900136 | chr11:65418436-65429938 |
11502 | 136 | 6 | 332 | 224 | 1 | 92 | 980 | NEAT1,SLC25A45,FRMD8,MIR612 |
| SE_02_286900137 | chr2:28389628-28409952 |
20324 | 137 | 5 | 491 | 91 | 2 | 69 | 675 | FOSL2,FLJ31356 |
| SE_02_286900138 | chr20:53735853-53741760 |
5907 | 138 | 2 | 131 | 11 | 1 | 3 | 0 | SUMO1P1 |
| SE_02_286900139 | chr2:37655424-37671655 |
16231 | 139 | 4 | 552 | 54 | 1 | 15 | 105 | CDC42EP3 |
| SE_02_286900140 | chr19:46288783-46301992 |
13209 | 140 | 3 | 356 | 391 | 2 | 84 | 251 | HIF3A,PPP5C |
| SE_02_286900141 | chr12:53047387-53052655 |
5268 | 141 | 2 | 139 | 62 | 1 | 13 | 494 | LOC283335,TNS2,EIF4B,IGFBP6,SPRYD3,MIR6757 |
| SE_02_286900142 | chr10:43842626-43869657 |
27031 | 142 | 8 | 789 | 190 | 1 | 10 | 472 | LINC00840,LINC00619,LINC00841 |
| SE_02_286900143 | chr3:123652566-123662335 |
9769 | 143 | 6 | 261 | 30 | 0 | 13 | 92 | MYLK,MYLK-AS2 |
| SE_02_286900144 | chr15:92801524-92833081 |
31557 | 144 | 9 | 958 | 61 | 0 | 39 | 0 | LINC01578,ASB9P1 |
| SE_02_286900145 | chr19:45401968-45406907 |
4939 | 145 | 1 | 122 | 78 | 0 | 28 | 290 | CD3EAP,PPP1R13L,ERCC1,ERCC2,MIR6088 |
| SE_02_286900146 | chr10:17199379-17218548 |
19169 | 146 | 5 | 562 | 404 | 5 | 38 | 236 | VIM-AS1,TRDMT1,VIM |
| SE_02_286900147 | chr1:234975541-234998881 |
23340 | 147 | 8 | 710 | 50 | 2 | 23 | 0 | LOC101927851 |
| SE_02_286900148 | chr2:187526804-187550388 |
23584 | 148 | 12 | 530 | 113 | 0 | 75 | 0 | TFPI |
| SE_02_286900149 | chr7:47596181-47610857 |
14676 | 149 | 6 | 437 | 46 | 0 | 9 | 0 | TNS3,LINC01447,C7ORF65 |
| SE_02_286900150 | chr3:172129258-172154283 |
25025 | 150 | 6 | 639 | 3 | 3 | 13 | 32 | FNDC3B |
| SE_02_286900151 | chr10:32950945-32963720 |
12775 | 151 | 5 | 342 | 139 | 0 | 0 | 295 | ITGB1 |
| SE_02_286900152 | chr7:40218777-40223031 |
4254 | 152 | 2 | 134 | 16 | 0 | 6 | 0 | SUGCT |
| SE_02_286900153 | chr16:20897093-20914597 |
17504 | 153 | 5 | 402 | 211 | 0 | 63 | 439 | LYRM1,DCUN1D3 |
| SE_02_286900154 | chr8:107221817-107226607 |
4790 | 154 | 2 | 123 | 7 | 1 | 5 | 0 | ANGPT1 |
| SE_02_286900155 | chr8:102805603-102810822 |
5219 | 155 | 3 | 117 | 42 | 0 | 8 | 643 | AZIN1 |
| SE_02_286900156 | chr17:78313786-78354106 |
40320 | 156 | 10 | 1247 | 48 | 2 | 149 | 0 | LOC100996291,LOC101928674,PGS1,SOCS3 |
| SE_02_286900157 | chr16:53808900-53823392 |
14492 | 157 | 4 | 385 | 34 | 7 | 48 | 27 | FTO |
| SE_02_286900158 | chr2:218396247-218407111 |
10864 | 158 | 3 | 410 | 149 | 1 | 35 | 1539 | SLC11A1,CTDSP1,MIR26B,CATIP-AS2,CATIP,VIL1,CATIP-AS1 |
| SE_02_286900159 | chr17:77319523-77324972 |
5449 | 159 | 2 | 186 | 17 | 1 | 0 | 195 | SEPT9 |
| SE_02_286900160 | chr2:237090173-237099152 |
8979 | 160 | 5 | 257 | 45 | 0 | 0 | 263 | COPS8 |
| SE_02_286900161 | chr10:3804229-3812548 |
8319 | 161 | 3 | 284 | 18 | 2 | 32 | 0 | KLF6 |
| SE_02_286900162 | chr1:201748336-201767364 |
19028 | 162 | 13 | 450 | 34 | 1 | 133 | 0 | NAV1,IPO9-AS1,MIR1231,MIR5191 |
| SE_02_286900163 | chr15:39262505-39302703 |
40198 | 163 | 11 | 1255 | 257 | 5 | 30 | 0 | C15ORF54 |
| SE_02_286900164 | chr17:45292691-45321718 |
29027 | 164 | 13 | 660 | 517 | 2 | 0 | 135 | MAP3K14,MAP3K14-AS1,SPATA32 |
| SE_02_286900165 | chr17:40485329-40523317 |
37988 | 165 | 10 | 1100 | 126 | 4 | 75 | 567 | TNS4,CCR7,IGFBP4 |
| SE_02_286900166 | chr7:116426754-116455659 |
28905 | 166 | 6 | 613 | 294 | 10 | 137 | 95 | CAV2 |
| SE_02_286900167 | chr1:151987880-152001577 |
13697 | 167 | 5 | 304 | 282 | 1 | 1 | 329 | S100A10,NBPF18P,S100A11 |
| SE_02_286900168 | chr19:16063593-16080408 |
16815 | 168 | 5 | 533 | 91 | 3 | 0 | 386 | TPM4,LINC00905,LINC00661,RAB8A |
| SE_02_286900169 | chr15:39172257-39214309 |
42052 | 169 | 12 | 1217 | 48 | 4 | 66 | 0 | C15ORF54 |
| SE_02_286900170 | chr16:75234433-75246784 |
12351 | 170 | 3 | 532 | 253 | 3 | 29 | 1191 | BCAR1,CTRB2,CTRB1,LOC100506281 |
| SE_02_286900171 | chr1:16139180-16153827 |
14647 | 171 | 8 | 410 | 205 | 0 | 12 | 280 | EPHA2 |
| SE_02_286900172 | chr18:40866644-40878315 |
11671 | 172 | 5 | 324 | 0 | 0 | 3 | 0 | KC6 |
| SE_02_286900173 | chr8:13245805-13277063 |
31258 | 173 | 9 | 1162 | 278 | 1 | 26 | 127 | DLC1 |
| SE_02_286900174 | chr8:120808851-120825692 |
16841 | 174 | 6 | 435 | 47 | 0 | 19 | 278 | SNTB1,LOC101927543 |
| SE_02_286900175 | chr5:124740502-124749936 |
9434 | 175 | 6 | 206 | 7 | 0 | 88 | 333 | ZNF608 |
| SE_02_286900176 | chr1:156745919-156751667 |
5748 | 176 | 3 | 150 | 93 | 0 | 0 | 157 | HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24 |
| SE_02_286900177 | chr22:46052424-46058260 |
5836 | 177 | 1 | 154 | 61 | 1 | 0 | 622 | PRR34,PRR34-AS1,MIR3619,LINC00899,LOC730668,MIRLET7BHG |
| SE_02_286900178 | chr15:89090949-89120856 |
29907 | 178 | 10 | 867 | 113 | 2 | 40 | 280 | ABHD2 |
| SE_02_286900179 | chr8:123670339-123693606 |
23267 | 179 | 4 | 718 | 55 | 3 | 36 | 261 | ANXA13,KLHL38 |
| SE_02_286900180 | chr2:237127853-237157362 |
29509 | 180 | 7 | 937 | 436 | 1 | 68 | 0 | COPS8 |
| SE_02_286900181 | chr4:158313087-158317224 |
4137 | 181 | 2 | 101 | 56 | 0 | 0 | 0 | TMEM144 |
| SE_02_286900182 | chr1:162854555-162858723 |
4168 | 182 | 3 | 124 | 71 | 0 | 12 | 170 | C1ORF110 |
| SE_02_286900183 | chr12:46549418-46563601 |
14183 | 183 | 7 | 320 | 60 | 2 | 17 | 0 | LOC100288798 |
| SE_02_286900184 | chr6:52536597-52552835 |
16238 | 184 | 9 | 437 | 278 | 3 | 0 | 0 | TRAM2,TRAM2-AS1 |
| SE_02_286900185 | chr14:77023391-77045752 |
22361 | 185 | 7 | 596 | 274 | 7 | 39 | 914 | IRF2BPL,LOC283575,LOC102724190 |
| SE_02_286900186 | chr17:64325992-64334934 |
8942 | 186 | 5 | 226 | 121 | 3 | 0 | 48 | PECAM1 |
| SE_02_286900187 | chrX:154368145-154374603 |
6458 | 187 | 2 | 99 | 177 | 0 | 0 | 311 | FLNA,RPL10,EMD,SNORA70,DNASE1L1,TAZ |
| SE_02_286900188 | chr1:154999823-155018060 |
18237 | 188 | 5 | 378 | 187 | 2 | 75 | 1447 | ZBTB7B,CKS1B,PBXIP1,SHC1,DCST2,PYGO2,LENEP,ADAM15,EFNA4,LOC100505666,MIR4258,FLAD1,DCST1 |
| SE_02_286900189 | chr17:49636871-49648644 |
11773 | 189 | 3 | 265 | 32 | 0 | 11 | 110 | SPOP |
| SE_02_286900190 | chr3:142209266-142220013 |
10747 | 190 | 6 | 218 | 85 | 2 | 46 | 59 | GK5 |
| SE_02_286900191 | chr7:47756781-47764332 |
7551 | 191 | 2 | 272 | 184 | 0 | 8 | 114 | LINC00525,C7ORF69 |
| SE_02_286900192 | chr2:37686800-37721024 |
34224 | 192 | 9 | 1080 | 79 | 3 | 98 | 0 | CDC42EP3 |
| SE_02_286900193 | chr7:116258943-116273891 |
14948 | 193 | 3 | 398 | 280 | 0 | 39 | 2 | TES,LOC102724434 |
| SE_02_286900194 | chr5:120599129-120624754 |
25625 | 194 | 11 | 778 | 64 | 3 | 26 | 57 | PRR16 |
| SE_02_286900195 | chr15:63042773-63053331 |
10558 | 195 | 8 | 286 | 142 | 2 | 81 | 841 | TPM1 |
| SE_02_286900196 | chr11:96302684-96339524 |
36840 | 196 | 13 | 931 | 164 | 7 | 0 | 0 | MAML2,MIR1260B |
| SE_02_286900197 | chr8:125555843-125558880 |
3037 | 197 | 3 | 107 | 0 | 1 | 0 | 68 | TRIB1 |
| SE_02_286900198 | chr4:137305823-137313006 |
7183 | 198 | 5 | 178 | 4 | 1 | 0 | 0 | PCDH18 |
| SE_02_286900199 | chr1:150560545-150577128 |
16583 | 199 | 7 | 422 | 815 | 3 | 0 | 379 | ADAMTSL4,MCL1,ADAMTSL4-AS1,FALEC,MIR4257 |
| SE_02_286900200 | chr7:74477405-74484556 |
7151 | 200 | 5 | 200 | 50 | 0 | 14 | 0 | GTF2IRD1 |
| SE_02_286900201 | chr2:36477417-36489903 |
12486 | 201 | 7 | 437 | 64 | 0 | 41 | 57 | CRIM1,FEZ2 |
| SE_02_286900202 | chr8:38996934-39004685 |
7751 | 202 | 3 | 219 | 58 | 0 | 1 | 111 | ADAM9,HTRA4,TM2D2 |
| SE_02_286900203 | chr22:50292568-50305948 |
13380 | 203 | 7 | 438 | 263 | 0 | 24 | 104 | PLXNB2,PPP6R2,MAPK11,TUBGCP6,DENND6B,HDAC10,MAPK12 |
| SE_02_286900204 | chr1:23554238-23563344 |
9106 | 204 | 5 | 333 | 68 | 1 | 23 | 369 | ID3,E2F2,LOC101928163 |
| SE_02_286900205 | chr4:137509854-137532499 |
22645 | 205 | 7 | 610 | 33 | 0 | 25 | 581 | PCDH18 |
| SE_02_286900206 | chr5:32753430-32786962 |
33532 | 206 | 10 | 927 | 108 | 6 | 140 | 349 | NPR3 |
| SE_02_286900207 | chr7:47782345-47788185 |
5840 | 207 | 2 | 145 | 28 | 0 | 8 | 0 | PKD1L1,C7ORF69,LINC00525 |
| SE_02_286900208 | chr9:95003340-95009960 |
6620 | 208 | 4 | 148 | 26 | 0 | 27 | 269 | C9ORF3,MIR6081 |
| SE_02_286900209 | chr1:93691782-93715802 |
24020 | 209 | 4 | 611 | 175 | 1 | 44 | 68 | BCAR3 |
| SE_02_286900210 | chr3:134309882-134335390 |
25508 | 210 | 7 | 697 | 306 | 0 | 142 | 0 | AMOTL2,MIR6827 |
| SE_02_286900211 | chr2:218281736-218298422 |
16686 | 211 | 6 | 454 | 852 | 1 | 42 | 514 | PNKD,TMBIM1,AAMP,MIR6810,GPBAR1,MIR6513 |
| SE_02_286900212 | chr7:139720349-139741277 |
20928 | 212 | 6 | 522 | 57 | 1 | 50 | 0 | HIPK2,TBXAS1 |
| SE_02_286900213 | chr8:58827592-58859250 |
31658 | 213 | 10 | 781 | 61 | 1 | 44 | 144 | TOX,NSMAF |
| SE_02_286900214 | chr7:100543681-100557275 |
13594 | 214 | 4 | 291 | 208 | 0 | 0 | 418 | AGFG2,PCOLCE,FBXO24,PCOLCE-AS1,LRCH4,ZASP,SAP25 |
| SE_02_286900215 | chr3:99240618-99252380 |
11762 | 215 | 6 | 387 | 9 | 1 | 55 | 0 | DCBLD2 |
| SE_02_286900216 | chr8:123619092-123634182 |
15090 | 216 | 6 | 423 | 77 | 0 | 25 | 0 | KLHL38 |
| SE_02_286900217 | chr19:1026077-1042860 |
16783 | 217 | 5 | 552 | 706 | 1 | 56 | 1555 | ABCA7,CNN2,HMHA1,GRIN3B,TMEM259,WDR18 |
| SE_02_286900218 | chr13:109242518-109271911 |
29393 | 218 | 10 | 928 | 299 | 5 | 6 | 0 | MYO16-AS1 |
| SE_02_286900219 | chr3:154969999-154973961 |
3962 | 219 | 2 | 90 | 12 | 0 | 8 | 0 | MME |
| SE_02_286900220 | chr17:38867755-38881016 |
13261 | 220 | 3 | 337 | 131 | 1 | 6 | 364 | LASP1,SNORA21,CWC25,RPL23,MIR6779,MIR4727,C17ORF98,LINC00672 |
| SE_02_286900221 | chr8:115054981-115057265 |
2284 | 221 | 1 | 54 | 0 | 0 | 0 | 0 | TRPS1 |
| SE_02_286900222 | chr19:47109281-47113180 |
3899 | 222 | 3 | 117 | 5 | 0 | 59 | 235 | ZC3H4,SAE1 |
| SE_02_286900223 | chr20:37986160-38002179 |
16019 | 223 | 11 | 466 | 63 | 0 | 23 | 364 | TTI1,RPRD1B |
| SE_02_286900224 | chr12:109460814-109464657 |
3843 | 224 | 2 | 112 | 300 | 0 | 0 | 49 | KCTD10,UBE3B |
| SE_02_286900225 | chr20:41308042-41330331 |
22289 | 225 | 5 | 559 | 194 | 1 | 63 | 113 | LPIN3,EMILIN3,ZHX3 |
| SE_02_286900226 | chr16:24977062-24994765 |
17703 | 226 | 7 | 507 | 195 | 3 | 34 | 82 | ARHGAP17,LOC554206 |
| SE_02_286900227 | chr6:26053764-26066632 |
12868 | 227 | 2 | 411 | 422 | 6 | 28 | 174 | HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A |
| SE_02_286900228 | chr12:108302628-108313814 |
11186 | 228 | 6 | 386 | 42 | 3 | 0 | 0 | CMKLR1 |
| SE_02_286900229 | chr1:36343124-36375487 |
32363 | 229 | 6 | 973 | 263 | 4 | 232 | 831 | STK40,EVA1B,SH3D21,LSM10 |
| SE_02_286900230 | chr1:201703220-201721779 |
18559 | 230 | 8 | 510 | 82 | 0 | 96 | 324 | MIR5191,IPO9-AS1,NAV1 |
| SE_02_286900231 | chr8:127851230-127860348 |
9118 | 231 | 4 | 279 | 7 | 0 | 20 | 90 | PVT1 |
| SE_02_286900232 | chr2:237407981-237414142 |
6161 | 232 | 3 | 196 | 15 | 0 | 3 | 48 | COL6A3 |
| SE_02_286900233 | chr10:73886348-73909095 |
22747 | 233 | 8 | 594 | 759 | 3 | 19 | 0 | C10ORF55,PLAU,CAMK2G |
| SE_02_286900234 | chr9:35509744-35520709 |
10965 | 234 | 6 | 217 | 112 | 1 | 0 | 0 | RUSC2,FAM166B |
| SE_02_286900235 | chr22:45468257-45479127 |
10870 | 235 | 5 | 311 | 13 | 0 | 0 | 0 | FBLN1 |
| SE_02_286900236 | chr6:56707788-56731822 |
24034 | 236 | 7 | 614 | 207 | 1 | 85 | 0 | DST |
| SE_02_286900237 | chr11:46279500-46300491 |
20991 | 237 | 8 | 532 | 153 | 1 | 114 | 113 | CREB3L1,DGKZ |
| SE_02_286900238 | chr4:65501004-65513921 |
12917 | 238 | 7 | 455 | 23 | 0 | 20 | 0 | EPHA5,EPHA5-AS1 |
| SE_02_286900239 | chr8:118187394-118209639 |
22245 | 239 | 5 | 564 | 13 | 2 | 65 | 810 | SAMD12,EXT1 |
| SE_02_286900240 | chr9:70411562-70421724 |
10162 | 240 | 5 | 235 | 37 | 0 | 0 | 367 | KLF9 |
| SE_02_286900241 | chr5:149484939-149497905 |
12966 | 241 | 3 | 332 | 29 | 1 | 40 | 335 | CSNK1A1 |
| SE_02_286900242 | chr19:42269638-42282694 |
13056 | 242 | 2 | 272 | 97 | 1 | 5 | 94 | CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145 |
| SE_02_286900243 | chr2:105389337-105404086 |
14749 | 243 | 6 | 440 | 117 | 0 | 47 | 411 | FHL2 |
| SE_02_286900244 | chr6:117439785-117450011 |
10226 | 244 | 5 | 341 | 161 | 2 | 18 | 0 | DCBLD1,ROS1 |
| SE_02_286900245 | chrX:107673190-107685619 |
12429 | 245 | 4 | 201 | 22 | 0 | 58 | 0 | TSC22D3,PRPS1 |
| SE_02_286900246 | chr17:45169873-45173802 |
3929 | 246 | 1 | 103 | 88 | 1 | 0 | 307 | HEXIM2,HEXIM1,PLCD3,ACBD4,FMNL1 |
| SE_02_286900247 | chr2:237455793-237476354 |
20561 | 247 | 6 | 608 | 226 | 5 | 8 | 0 | MLPH,MIR6811,COL6A3 |
| SE_02_286900248 | chr12:108689387-108697205 |
7818 | 248 | 4 | 198 | 155 | 0 | 5 | 0 | CORO1C |
| SE_02_286900249 | chr8:119573467-119587449 |
13982 | 249 | 5 | 393 | 76 | 6 | 23 | 246 | ENPP2 |
| SE_02_286900250 | chr7:130352492-130374538 |
22046 | 250 | 7 | 617 | 342 | 3 | 68 | 838 | CPA5,CPA1 |
| SE_02_286900251 | chr10:62230131-62245696 |
15565 | 251 | 6 | 329 | 102 | 2 | 23 | 154 | RTKN2 |
| SE_02_286900252 | chr2:213148253-213154316 |
6063 | 252 | 3 | 148 | 51 | 0 | 24 | 189 | IKZF2 |
| SE_02_286900253 | chr2:237221335-237242763 |
21428 | 253 | 7 | 643 | 79 | 0 | 25 | 0 | COPS8 |
| SE_02_286900254 | chr11:9753224-9789218 |
35994 | 254 | 7 | 940 | 505 | 1 | 121 | 1332 | SBF2,SBF2-AS1,LOC440028,LOC101928008 |
| SE_02_286900255 | chr9:121271594-121289384 |
17790 | 255 | 7 | 472 | 740 | 0 | 56 | 494 | GSN-AS1,GSN |
| SE_02_286900256 | chr7:19557978-19562645 |
4667 | 256 | 2 | 142 | 26 | 0 | 33 | 0 | MIR3146 |
| SE_02_286900257 | chr6:166598096-166625241 |
27145 | 257 | 9 | 786 | 91 | 2 | 17 | 0 | RPS6KA2 |
| SE_02_286900258 | chr14:74563625-74580536 |
16911 | 258 | 6 | 472 | 224 | 6 | 23 | 0 | LTBP2 |
| SE_02_286900259 | chr7:23467311-23475629 |
8318 | 259 | 3 | 181 | 54 | 0 | 4 | 251 | IGF2BP3,RPS2P32 |
| SE_02_286900260 | chr17:43360078-43370186 |
10108 | 260 | 3 | 437 | 1613 | 3 | 74 | 59 | LINC00910,ARL4D |
| SE_02_286900261 | chr18:67264416-67268118 |
3702 | 261 | 2 | 114 | 2 | 0 | 13 | 0 | MIR5011,LOC643542 |
| SE_02_286900262 | chr2:43454702-43468715 |
14013 | 262 | 6 | 396 | 117 | 6 | 35 | 0 | THADA |
| SE_02_286900263 | chr8:48407113-48410339 |
3226 | 263 | 3 | 93 | 23 | 0 | 0 | 0 | LOC101929268 |
| SE_02_286900264 | chr9:18489785-18492710 |
2925 | 264 | 1 | 95 | 4 | 0 | 10 | 0 | ADAMTSL1 |
| SE_02_286900265 | chr22:37742992-37753754 |
10762 | 265 | 3 | 320 | 257 | 1 | 7 | 285 | TRIOBP,MIR5096 |
| SE_02_286900266 | chr8:106498127-106501705 |
3578 | 266 | 3 | 80 | 4 | 0 | 4 | 0 | OXR1 |
| SE_02_286900267 | chr8:115417630-115427568 |
9938 | 267 | 3 | 213 | 7 | 0 | 17 | 61 | TRPS1 |
| SE_02_286900268 | chr7:94367166-94382790 |
15624 | 268 | 5 | 394 | 55 | 13 | 27 | 0 | COL1A2 |
| SE_02_286900269 | chr7:74574294-74611119 |
36825 | 269 | 8 | 984 | 178 | 3 | 69 | 561 | GTF2IRD1,GTF2I |
| SE_02_286900270 | chr5:33299355-33314182 |
14827 | 270 | 7 | 392 | 138 | 1 | 48 | 0 | TARS |
| SE_02_286900271 | chr8:107443183-107458414 |
15231 | 271 | 6 | 395 | 29 | 2 | 4 | 0 | ANGPT1 |
| SE_02_286900272 | chr4:156998398-157015368 |
16970 | 272 | 5 | 478 | 41 | 0 | 16 | 0 | PDGFC |
| SE_02_286900273 | chr17:31570491-31582897 |
12406 | 273 | 3 | 352 | 33 | 1 | 46 | 119 | MIR4725,MIR365B,MIR4724,MIR193A |
| SE_02_286900274 | chr17:2393011-2413058 |
20047 | 274 | 6 | 654 | 284 | 1 | 26 | 684 | LOC284009,MNT |
| SE_02_286900275 | chr1:218344696-218351755 |
7059 | 275 | 5 | 148 | 40 | 1 | 28 | 338 | TGFB2,TGFB2-AS1 |
| SE_02_286900276 | chr5:141507879-141522256 |
14377 | 276 | 4 | 335 | 260 | 0 | 50 | 889 | PCDHGB5,PCDHGB1,PCDHGC4,PCDHGA1,PCDHGA6,PCDHGB2,PCDHGA2,PCDHGA4,PCDHGB3,PCDHGC3,PCDHGA3,PCDHGA11,PCDHGA8,PCDHGA10,PCDHGA12,PCDHGA9,PCDHGB6,PCDHGA7,PCDHGC5,PCDHGB7,DIAPH1,PCDHGA5,PCDHGB4,LOC100505658 |
| SE_02_286900277 | chr4:94451887-94457982 |
6095 | 277 | 2 | 156 | 1 | 0 | 2 | 240 | PDLIM5 |
| SE_02_286900278 | chr10:62076597-62096707 |
20110 | 278 | 5 | 519 | 37 | 5 | 21 | 753 | ARID5B |
| SE_02_286900279 | chr2:193823337-193847870 |
24533 | 279 | 9 | 494 | 11 | 3 | 26 | 0 | LOC101927406 |
| SE_02_286900280 | chr21:43711263-43729483 |
18220 | 280 | 6 | 556 | 204 | 0 | 32 | 290 | PDXK,CSTB |
| SE_02_286900281 | chr3:125107662-125140751 |
33089 | 281 | 8 | 1021 | 403 | 4 | 63 | 525 | SLC12A8,MIR5092 |
| SE_02_286900282 | chr7:5554767-5562709 |
7942 | 282 | 2 | 276 | 28 | 0 | 0 | 0 | FSCN1,FBXL18,LOC221946,ACTB |
| SE_02_286900283 | chr19:41322868-41328271 |
5403 | 283 | 3 | 189 | 111 | 0 | 19 | 421 | CCDC97,TMEM91,TGFB1,B9D2 |
| SE_02_286900284 | chr8:61711300-61722089 |
10789 | 284 | 4 | 289 | 34 | 0 | 53 | 224 | ASPH,MIR4470 |
| SE_02_286900285 | chr19:2476187-2503966 |
27779 | 285 | 8 | 943 | 101 | 2 | 101 | 465 | GADD45B,TIMM13,MIR7108,LMNB2 |
| SE_02_286900286 | chr3:177904170-177907727 |
3557 | 286 | 2 | 83 | 1 | 0 | 1 | 0 | KCCAT211 |
| SE_02_286900287 | chr12:79408225-79424825 |
16600 | 287 | 7 | 375 | 88 | 4 | 59 | 35 | SYT1,MIR1252 |
| SE_02_286900288 | chr21:43585266-43602089 |
16823 | 288 | 4 | 377 | 147 | 1 | 21 | 49 | HSF2BP,MIR6070 |
| SE_02_286900289 | chr10:4661881-4673302 |
11421 | 289 | 5 | 304 | 26 | 0 | 16 | 69 | LINC00705,LINC00704 |
| SE_02_286900290 | chr19:47718111-47730243 |
12132 | 290 | 5 | 351 | 148 | 1 | 0 | 253 | EHD2,SNORD23,SEPW1,GLTSCR2,GLTSCR2-AS1 |
| SE_02_286900291 | chr12:58423719-58427419 |
3700 | 291 | 2 | 100 | 6 | 0 | 2 | 0 | LOC100506869 |
| SE_02_286900292 | chr15:68816943-68820862 |
3919 | 292 | 1 | 91 | 1 | 0 | 6 | 65 | ANP32A,MIR4312,ANP32A-IT1 |
| SE_02_286900293 | chr17:43266628-43300976 |
34348 | 293 | 7 | 0 | 0 | 0 | 75 | 0 | RNU2-1,LINC00854 |
| SE_02_286900294 | chr6:131948268-131980886 |
32618 | 294 | 10 | 786 | 156 | 1 | 39 | 477 | CTGF |
| SE_02_286900295 | chr5:177493089-177496922 |
3833 | 295 | 2 | 107 | 41 | 0 | 0 | 119 | PDLIM7,DOK3,PRR7,DDX41,DBN1,PRR7-AS1 |
| SE_02_286900296 | chr5:149886057-149897144 |
11087 | 296 | 2 | 306 | 33 | 1 | 31 | 247 | PDE6A,LOC644762 |
| SE_02_286900297 | chr16:70691540-70716621 |
25081 | 297 | 8 | 791 | 569 | 0 | 161 | 498 | VAC14,VAC14-AS1,MTSS1L |
| SE_02_286900298 | chr8:103228425-103239123 |
10698 | 298 | 5 | 281 | 165 | 0 | 27 | 239 | BAALC,BAALC-AS1 |
| SE_02_286900299 | chr3:177771206-177782689 |
11483 | 299 | 4 | 262 | 53 | 0 | 13 | 0 | KCCAT211 |
| SE_02_286900300 | chr5:148965098-148979718 |
14620 | 300 | 9 | 428 | 154 | 1 | 14 | 0 | MIR584 |
| SE_02_286900301 | chr8:102409501-102412781 |
3280 | 301 | 2 | 83 | 25 | 0 | 1 | 246 | UBR5 |
| SE_02_286900302 | chr1:172342601-172360209 |
17608 | 302 | 4 | 406 | 134 | 1 | 142 | 0 | DNM3,C1ORF105 |
| SE_02_286900303 | chr14:30192000-30197193 |
5193 | 303 | 5 | 128 | 11 | 0 | 14 | 0 | PRKD1 |
| SE_02_286900304 | chr8:128168086-128184028 |
15942 | 304 | 6 | 476 | 18 | 3 | 48 | 0 | MIR1208 |
| SE_02_286900305 | chr16:54283092-54286857 |
3765 | 305 | 1 | 106 | 9 | 1 | 17 | 740 | IRX3,LOC100996338 |
| SE_02_286900306 | chr2:102048339-102066398 |
18059 | 306 | 8 | 522 | 207 | 2 | 16 | 0 | IL1R2,IL1R1 |
| SE_02_286900307 | chr3:112646652-112656141 |
9489 | 307 | 3 | 231 | 26 | 0 | 9 | 0 | LINC01279,CCDC80 |
| SE_02_286900308 | chr7:22854278-22860172 |
5894 | 308 | 3 | 171 | 131 | 1 | 3 | 41 | SNORD93,TOMM7 |
| SE_02_286900309 | chr9:127545278-127574759 |
29481 | 309 | 8 | 828 | 661 | 3 | 96 | 208 | FAM129B,STXBP1 |
| SE_02_286900310 | chr4:158367772-158372692 |
4920 | 310 | 3 | 133 | 17 | 0 | 0 | 0 | RXFP1 |
| SE_02_286900311 | chr7:2520919-2535206 |
14287 | 311 | 4 | 475 | 86 | 1 | 19 | 1010 | LFNG,MIR4648,IQCE,BRAT1,GRIFIN |
| SE_02_286900312 | chr16:73053130-73068621 |
15491 | 312 | 6 | 370 | 37 | 0 | 89 | 130 | ZFHX3,HCCAT5 |
| SE_02_286900313 | chr6:52502857-52523409 |
20552 | 313 | 10 | 577 | 203 | 7 | 16 | 793 | TRAM2 |
| SE_02_286900314 | chr17:59753692-59764624 |
10932 | 314 | 7 | 222 | 232 | 2 | 24 | 0 | VMP1,PTRH2 |
| SE_02_286900315 | chr15:96328622-96341109 |
12487 | 315 | 4 | 258 | 0 | 0 | 43 | 1096 | NR2F2,MIR1469,NR2F2-AS1 |
| SE_02_286900316 | chr11:1826082-1831619 |
5537 | 316 | 3 | 189 | 37 | 0 | 0 | 184 | TNNI2,LSP1,MIR4298,SYT8,MIR7847 |
| SE_02_286900317 | chr4:145732667-145737093 |
4426 | 317 | 5 | 106 | 8 | 0 | 0 | 60 | C4ORF51 |
| SE_02_286900318 | chr14:61746461-61756438 |
9977 | 318 | 3 | 285 | 31 | 0 | 64 | 148 | HIF1A,HIF1A-AS2,SNAPC1 |
| SE_02_286900319 | chr1:109369473-109396127 |
26654 | 319 | 6 | 645 | 467 | 2 | 59 | 120 | SORT1,PSMA5 |
| SE_02_286900320 | chr1:152034571-152049027 |
14456 | 320 | 2 | 298 | 186 | 0 | 5 | 265 | S100A11,LOC100131107,TCHHL1,NBPF18P,S100A10 |
| SE_02_286900321 | chr20:36085511-36099180 |
13669 | 321 | 3 | 270 | 236 | 0 | 12 | 211 | EPB41L1,LINC00657 |
| SE_02_286900322 | chr2:231661819-231681878 |
20059 | 322 | 6 | 617 | 32 | 2 | 27 | 0 | PTMA,MIR1244-2 |
| SE_02_286900323 | chrX:103530792-103540567 |
9775 | 323 | 5 | 129 | 110 | 0 | 0 | 0 | LOC105373300,TCEAL4,RAB40A |
| SE_02_286900324 | chr11:118912149-118925893 |
13744 | 324 | 8 | 301 | 128 | 2 | 100 | 0 | MIR4492,CXCR5,BCL9L,UPK2,FOXR1 |
| SE_02_286900325 | chr4:156968785-156977459 |
8674 | 325 | 5 | 211 | 7 | 0 | 0 | 199 | PDGFC |
| SE_02_286900326 | chr1:244833096-244836474 |
3378 | 326 | 1 | 89 | 24 | 0 | 0 | 203 | COX20,HNRNPU,HNRNPU-AS1 |
| SE_02_286900327 | chr2:235020684-235028599 |
7915 | 327 | 6 | 262 | 15 | 2 | 8 | 0 | SH3BP4 |
| SE_02_286900328 | chr7:139770570-139777727 |
7157 | 328 | 5 | 182 | 20 | 0 | 1 | 105 | HIPK2,TBXAS1 |
| SE_02_286900329 | chr16:10991516-11017522 |
26006 | 329 | 6 | 877 | 238 | 14 | 89 | 91 | CLEC16A,DEXI |
| SE_02_286900330 | chr19:11137419-11153410 |
15991 | 330 | 7 | 548 | 168 | 4 | 86 | 261 | SPC24,LDLR,KANK2,MIR6886 |
| SE_02_286900331 | chr3:152301848-152329574 |
27726 | 331 | 9 | 679 | 130 | 2 | 20 | 0 | MBNL1,MBNL1-AS1,TMEM14E |
| SE_02_286900332 | chr5:136011680-136032595 |
20915 | 332 | 7 | 548 | 86 | 8 | 0 | 177 | TGFBI,VTRNA2-1 |
| SE_02_286900333 | chr4:175418128-175422995 |
4867 | 333 | 4 | 122 | 21 | 0 | 3 | 0 | GPM6A,LOC101928590 |
| SE_02_286900334 | chr5:169694816-169707679 |
12863 | 334 | 3 | 381 | 45 | 2 | 43 | 418 | DOCK2 |
| SE_02_286900335 | chr8:127222056-127225963 |
3907 | 335 | 3 | 118 | 7 | 0 | 0 | 0 | CASC21,CCAT1,CASC19 |
SE annotation visualization
Information description of sample and annotation
| Case ID: | Name:GSM4594309 |
| Input ID: | Name:GSM4594308 |
| Common SNP: | dbSNP |
| eQTL: | GTEx, HaploReg v4.1, PancanQTL |
| Risk SNP : | GWAS Catalog, GWASdb v2.0 |
| TFBS: | TFBS Conserved of UCSC |
| CRISPR/Cas9 target site: | CRISPR Targets of UCSC |
Software and parameters used
| Read Mapping: | bowtie(v2.4.4) -p 10 -x -S -U |
| Peak Calling: | macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto |
| Stitching Distance: | 12.5 kb |
| TSS Exclusive Zone: | +/- 2 kb |