Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_285500001 chr4:30743195-30880375 137180 1 47 378519777520 PCDH7
SE_02_285500002 chr17:43231409-43301511 70102 2 33 0702210 RNU2-1,TMEM106A,LINC00854
SE_02_285500003 chr8:93819107-93938676 119569 3 41 33279719499708 PDP1,MIR378D2,TMEM67
SE_02_285500004 chr19:13838608-13862338 23730 4 6 6442051110 NANOS3,C19ORF57,LOC284454,MIR23A,ZSWIM4,MIR27A,MIR24-2,MIR181D,MIR181C,CC2D1A
SE_02_285500005 chr18:3594400-3627736 33336 5 7 884155553681 DLGAP1,DLGAP1-AS2,DLGAP1-AS1
SE_02_285500006 chr8:143933834-143954482 20648 6 4 725787202079 PLEC,MIR661,PARP10,GRINA
SE_02_285500007 chr6:158686121-158744413 58292 7 17 1728315324303 SYTL3,DYNLT1,MIR3918
SE_02_285500008 chr8:125636906-125702671 65765 8 22 19058771550 TRIB1
SE_02_285500009 chr10:93421487-93482723 61236 9 21 1783391759382 MYOF,CEP55
SE_02_285500010 chr7:130881005-130925621 44616 10 9 134316710185340 LOC100506860,LINC-PINT,MIR29A,MIR29B1
SE_02_285500011 chr22:46065408-46087293 21885 11 3 63048153126 MIRLET7BHG,PRR34,MIR3619,LINC00899,PRR34-AS1,MIRLET7A3,MIR4763,MIRLET7B
SE_02_285500012 chr10:112475799-112549258 73459 12 28 178721221499 VTI1A,ZDHHC6
SE_02_285500013 chr4:74617771-74683495 65724 13 17 1902744330 BTC
SE_02_285500014 chr9:21544112-21593830 49718 14 24 14081898126153 MIR31HG,MIR31
SE_02_285500015 chr1:8019114-8099379 80265 15 25 19586694215147 ERRFI1
SE_02_285500016 chr12:75694996-75797861 102865 16 37 29092107480 KRR1
SE_02_285500017 chr11:65470591-65509033 38442 17 16 110418133160935 MALAT1,SCYL1,LTBP3,NEAT1,MIR612
SE_02_285500018 chr17:81511075-81520414 9339 18 3 41329500440 ACTG1,FSCN2,FAAP100,NPLOC4
SE_02_285500019 chr2:226114241-226193003 78762 19 23 206019510108323 LOC646736
SE_02_285500020 chr11:122136176-122200201 64025 20 32 1723176251154 MIR100,MIRLET7A2,MIR100HG,MIR125B1,BLID
SE_02_285500021 chr12:52143346-52164535 21189 21 4 673990730 OR7E47P,KRT80,LINC00592,C12ORF80
SE_02_285500022 chr10:112359895-112406286 46391 22 7 12814035176454 ACSL5,GUCY2GP,VTI1A,ZDHHC6
SE_02_285500023 chr11:118907253-118930370 23117 23 8 5522272139619 BCL9L,MIR4492,CXCR5,UPK2,FOXR1
SE_02_285500024 chr3:111890502-111947606 57104 24 27 1473343441689 PHLDB2,ABHD10
SE_02_285500025 chr3:98528450-98586592 58142 25 16 1568717970388 GPR15,CPOX,OR5K2,CLDND1
SE_02_285500026 chr9:129459240-129503261 44021 26 12 1303144064553 LINC00963
SE_02_285500027 chr6:158848618-158871678 23060 27 3 611122236120 C6ORF99,OSTCP1,EZR,EZR-AS1
SE_02_285500028 chr22_KI270733v1_random:110577-175343 64766 28 17 00000 RNA18S5,RNA5-8S5,MIR3687-1,RNA28S5,MIR6724-1,RNA45S5
SE_02_285500029 chr4:31017692-31107554 89862 29 41 2648673610 PCDH7,LOC102723778
SE_02_285500030 chr12:75622570-75669201 46631 30 20 12957404510 KRR1
SE_02_285500031 chr12:88919739-88970832 51093 31 18 11474841600 LOC728084
SE_02_285500032 chr19:13140885-13173363 32478 32 16 84219322531303 NACC1,IER2,STX10,LYL1,TRMT1
SE_02_285500033 chr4:101101612-101164983 63371 33 28 159210779931 PPP3CA,MIR8066
SE_02_285500034 chr6:151035389-151085857 50468 34 13 1629100988111 MTHFD1L,LOC102723831,AKAP12
SE_02_285500035 chr12:116491902-116530248 38346 35 8 1127244100 MAP1LC3B2,LINC00173
SE_02_285500036 chr17:2391644-2408345 16701 36 5 480252126684 LOC284009,MNT
SE_02_285500037 chr9:21668611-21693400 24789 37 5 95217111800 MIR31HG
SE_02_285500038 chr1:156102915-156130919 28004 38 7 6813644182653 LMNA,LAMTOR2,RAB25,UBQLN4,SEMA4A,MEX3A
SE_02_285500039 chr5:115920305-115941805 21500 39 11 7141534750 LVRN
SE_02_285500040 chr1:16139041-16187789 48748 40 14 13161081399438 EPHA2,RSG1,ARHGEF19
SE_02_285500041 chr8:127204963-127232581 27618 41 11 77023218407 CCAT1,CASC21,CASC19
SE_02_285500042 chr19:38681181-38695019 13838 42 5 3804952210 ACTN4,CAPN12
SE_02_285500043 chr4:30894071-30963868 69797 43 34 1957150428344 PCDH7
SE_02_285500044 chr17:82205354-82231624 26270 44 4 79994820511 SLC16A3,CCDC57,CSNK1D,MIR6787
SE_02_285500045 chr19:15824523-15838369 13846 45 5 44988300499 UCA1,OR10H5,CYP4F24P,LOC102724279,OR10H1
SE_02_285500046 chr20:31591149-31612927 21778 46 4 701807492381 MIR3193,ID1,COX4I2,MCTS2P,HM13-AS1
SE_02_285500047 chr17:59827495-59847403 19908 47 5 437226020217 MIR21,VMP1,RPS6KB1,TUBD1
SE_02_285500048 chr17:75077196-75097340 20144 48 6 571748117542 SLC16A5,NT5C,ATP5H,KCTD2,ARMC7
SE_02_285500049 chr13:97252703-97280438 27735 49 10 7034639271 MBNL2
SE_02_285500050 chr17:17821978-17850195 28217 50 6 72170951171310 TOM1L2,SREBF1,SMCR5,MIR6777,MIR33B
SE_02_285500051 chr7:5417813-5430395 12582 51 3 37611060795 TNRC18
SE_02_285500052 chrUn_GL000220v1:93889-161529 67640 52 15 00000 RNA45S5,RNA5-8S5,LOC100507412,MIR6724-1,RNA28S5,RNA18S5
SE_02_285500053 chr21:8218847-8257191 38344 53 13 00000 MIR663A,MIR6724-1,RNA28S5,RNA5-8S5,LOC100507412,MIR3687-1,MIR3648-1,RNA18S5
SE_02_285500054 chr17:64651057-64713395 62338 54 14 15655292139247 SMURF2
SE_02_285500055 chr1:998123-1007604 9481 55 3 345329010416 HES4,PLEKHN1,NOC2L,PERM1,AGRN,ISG15,KLHL17
SE_02_285500056 chr15:60370647-60407977 37330 56 7 10323735126369 ANXA2
SE_02_285500057 chr7:130986444-131017158 30714 57 9 8143835659 LINC-PINT,LOC100506860
SE_02_285500058 chr4:168531579-168590096 58517 58 19 16061617470 PALLD
SE_02_285500059 chr19:39397827-39411008 13181 59 3 3201040761133 ZFP36,MIR4530,MED29,PLEKHG2,SUPT5H,RPS16,PAF1
SE_02_285500060 chr8:125258217-125300255 42038 60 15 11756086285 NSMCE2,TRIB1
SE_02_285500061 chr10:28078071-28141461 63390 61 29 16692189124253 MPP7,ARMC4
SE_02_285500062 chr12:124904448-124941479 37031 62 11 12781154621068 MIR5188,UBC,SCARB1,DHX37
SE_02_285500063 chr18:3648483-3667837 19354 63 5 5795834025 DLGAP1,DLGAP1-AS2
SE_02_285500064 chr4:11605017-11651771 46754 64 14 146511931290 HS3ST1
SE_02_285500065 chr10:43399251-43421199 21948 65 6 64047100327 HNRNPF,ZNF487,FXYD4
SE_02_285500066 chr1:8154699-8212704 58005 66 21 17762962930 LOC102724539
SE_02_285500067 chr11:65417335-65426723 9388 67 3 270132271605 NEAT1,SLC25A45,FRMD8,MIR612
SE_02_285500068 chr16:69391552-69417943 26391 68 10 6582960300 TERF2,TMED6,CYB5B
SE_02_285500069 chr17:7833987-7851598 17611 69 4 55519111221566 KDM6B,CYB5D1,CHD3,TMEM88,NAA38
SE_02_285500070 chr17:81867375-81872710 5335 70 1 1814800984 ARHGDIA,ANAPC11,FAM195B,ALYREF,PCYT2,NPB,PPP1R27,SIRT7,P4HB
SE_02_285500071 chr20:31694029-31724024 29995 71 10 689533427363 ABALON,BCL2L1,TPX2
SE_02_285500072 chr14:68784348-68797688 13340 72 6 40746640982 ZFP36L1
SE_02_285500073 chr7:27164120-27174816 10696 73 1 310940211972 MIR196B,HOXA10,HOXA10-HOXA9,HOXA10-AS,HOXA9,HOXA11,HOXA-AS3,HOTTIP,HOXA-AS2,HOXA7,HOXA3,HOXA5,HOXA4,HOXA13,HOXA6,HOXA11-AS
SE_02_285500074 chr2:231701753-231717869 16116 74 3 574120271021 PTMA,MIR1244-2
SE_02_285500075 chr21:8439975-8472333 32358 75 14 00000 RNA5-8S5,RNA45S5,RNA28S5
SE_02_285500076 chrX:40130656-40177629 46973 76 9 85880148139 BCOR
SE_02_285500077 chr2:231661787-231682167 20380 77 7 625322270 PTMA,MIR1244-2
SE_02_285500078 chr7:116423416-116466539 43123 78 12 98951110150127 CAV2
SE_02_285500079 chr4:78550894-78570266 19372 79 6 49016403163 ANXA3
SE_02_285500080 chr3:98952947-98985513 32566 80 18 7824280520 DCBLD2
SE_02_285500081 chr2:156331712-156343626 11914 81 7 22416146511 NR4A2
SE_02_285500082 chr2:226647696-226675250 27554 82 12 7951902647 MIR5702
SE_02_285500083 chr12:65818030-65834552 16522 83 5 37916523598 RPSAP52,HMGA2,LOC100129940
SE_02_285500084 chr5:115839594-115866342 26748 84 15 8291810132344 AP3S1,ATG12,CDO1
SE_02_285500085 chr19:2029389-2062564 33175 85 9 117012521151966 MKNK2,IZUMO4,MOB3A,BTBD2
SE_02_285500086 chr18:70279288-70296862 17574 86 7 47557211180 SOCS6,LOC101927481
SE_02_285500087 chr19:38848396-38865825 17429 87 2 533459035310 HNRNPL,ECH1,NFKBIB,SIRT2,RINL,LGALS4,CCER2
SE_02_285500088 chr12:121799752-121805677 5925 88 1 1216504619 SETD1B,LINC01089,RHOF
SE_02_285500089 chr10:100362581-100376880 14299 89 5 353139068417 OLMALINC,SCD,PKD2L1
SE_02_285500090 chr6:129489129-129503064 13935 90 4 3611528246 LAMA2,ARHGAP18
SE_02_285500091 chr12:46429692-46475198 45506 91 10 11155731100 LOC100288798
SE_02_285500092 chr2:168189746-168221310 31564 92 16 909894730 STK39
SE_02_285500093 chr6:34223504-34246367 22863 93 7 727190441079 MIR6835,HMGA1,C6ORF1
SE_02_285500094 chr12:65630015-65659320 29305 94 14 8001280890 LOC100507065
SE_02_285500095 chr19:11084177-11095911 11734 95 7 33356917298 LDLR,MIR6886
SE_02_285500096 chr19:12777702-12796572 18870 96 5 4272431119489 JUNB,MIR5684,BEST2,RTBDN,ASNA1,HOOK2,RNASEH2A,PRDX2,C19ORF43,MAST1
SE_02_285500097 chr17:81395679-81401018 5339 97 1 1643300261 BAHCC1,MIR4740,LOC100130370
SE_02_285500098 chr4:186805024-186847017 41993 98 10 10563752630 FAT1
SE_02_285500099 chr17:17009700-17029706 20006 99 7 585407050 TNFRSF13B,MPRIP
SE_02_285500100 chrX:115843437-115888884 45447 100 20 280000 DANT2
SE_02_285500101 chr10:110395383-110418000 22617 101 10 6637721948 DUSP5
SE_02_285500102 chr11:62539089-62563240 24151 102 10 5867752134343 AHNAK,MIR3654,EEF1G,MTA2,ROM1,TUT1,EML3,MIR6747
SE_02_285500103 chr1:156746147-156752806 6659 103 1 16410502363 HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24
SE_02_285500104 chr2:239245385-239280680 35295 104 10 11391047230 HDAC4,MIR4269,MGC16025
SE_02_285500105 chr19:43753568-43785456 31888 105 6 926984411254 SMG9,KCNN4,LYPD5,ZNF283,IRGC
SE_02_285500106 chr19:40714355-40719646 5291 106 1 166103120684 ADCK4,ITPKC,NUMBL,C19ORF54,SNRPA
SE_02_285500107 chr1:84145219-84178035 32816 107 14 674751095 PRKACB
SE_02_285500108 chr19:1246025-1254075 8050 108 1 342391141626 MIDN,C19ORF24,CIRBP,CIRBP-AS1,ATP5D,STK11,CBARP,EFNA2
SE_02_285500109 chr1:66315324-66357406 42082 109 19 102289445213 PDE4B
SE_02_285500110 chr19:1853676-1876703 23027 110 12 707302246605 KLF16,ATP8B3,REXO1,LOC100288123,ADAT3,MIR1909,SCAMP4,ABHD17A
SE_02_285500111 chr20:31558967-31575216 16249 111 4 459469325779 HM13,HM13-AS1,MCTS2P,ID1,MIR3193
SE_02_285500112 chr10:31913167-31948304 35137 112 13 939186533160 ARHGAP12
SE_02_285500113 chr10:112950510-112959944 9434 113 2 2272508328 TCF7L2
SE_02_285500114 chr10:99774975-99786617 11642 114 2 245237294121 ABCC2,CUTC,COX15
SE_02_285500115 chr12:53364890-53374320 9430 115 2 2371210160 SP1,SP7,AAAS,AMHR2
SE_02_285500116 chr12:12716456-12726080 9624 116 2 28451210536 CDKN1B,APOLD1,MIR613,GPR19
SE_02_285500117 chr3:114638329-114660582 22253 117 9 518134160 ZBTB20
SE_02_285500118 chr20:62732249-62742019 9770 118 4 3941170130 NTSR1,LINC00659
SE_02_285500119 chr17:68377306-68385247 7941 119 2 2171911064 ARSG,MIR635,PRKAR1A
SE_02_285500120 chr8:125110796-125154557 43761 120 14 111510918730 NSMCE2,KIAA0196
SE_02_285500121 chr19:45423679-45456660 32981 121 7 90733103390 ERCC1,MIR6088,CD3EAP,PPP1R13L,PPM1N,FOSB,RTN2
SE_02_285500122 chr2:231603827-231622712 18885 122 4 5181990160 C2ORF57
SE_02_285500123 chr10:80195767-80208946 13179 123 5 305254027436 ANXA11,LINC00857
SE_02_285500124 chr2:181776802-181792973 16171 124 6 410120370 NEUROD1,SSFA2
SE_02_285500125 chr1:16895077-16914568 19491 125 3 7386900061 RNVU1-18,CROCC
SE_02_285500126 chr12:108824089-108858226 34137 126 9 938297234316 SSH1,MIR619,DAO
SE_02_285500127 chr11:65897950-65904259 6309 127 1 16117900154 FOSL1,MUS81,TSGA10IP,CCDC85B,CTSW,EFEMP2,DRAP1,C11ORF68,FIBP,CFL1
SE_02_285500128 chr21:8402536-8420357 17821 128 9 00000 LOC100507412,RNA45S5
SE_02_285500129 chr17:1484569-1489906 5337 129 1 15152020423 MYO1C,PITPNA-AS1,INPP5K,CRK
SE_02_285500130 chr8:127246455-127268378 21923 130 7 63651300 CASC21,CCAT1,CASC19
SE_02_285500131 chr6:73519250-73524749 5499 131 1 161166223291 EEF1A1
SE_02_285500132 chr19:1745159-1767509 22350 132 7 704141104403 ONECUT3,ATP8B3,MIR1909
SE_02_285500133 chr12:104271709-104290059 18350 133 7 487180118230 TXNRD1,EID3
SE_02_285500134 chr22:37315529-37331536 16007 134 12 488803296 CYTH4,LOC100506271
SE_02_285500135 chr2:223523074-223577729 54655 135 12 1452173650 SCG2,AP1S3
SE_02_285500136 chr12:46547626-46558738 11112 136 3 247572170 LOC100288798
SE_02_285500137 chr12:12869545-12885487 15942 137 3 487312151158 RPL13AP20,MIR614,GPRC5A
SE_02_285500138 chr2:219684463-219707117 22654 138 5 5821065930 SLC4A3
SE_02_285500139 chr17:59781829-59788685 6856 139 1 131107050 VMP1,MIR21
SE_02_285500140 chr3:104437164-104447001 9837 140 3 373180170 MIR548AB,ALCAM
SE_02_285500141 chr18:70356345-70382811 26466 141 11 80681480 LOC101060542,LOC101927481
SE_02_285500142 chr1:26691898-26698280 6382 142 1 1246818569 ARID1A
SE_02_285500143 chr6:158792016-158820099 28083 143 15 83621029615 EZR,EZR-AS1,OSTCP1,MIR3918,C6ORF99
SE_02_285500144 chr12:6361364-6377903 16539 144 5 48510617810 LTBR,SCNN1A,TNFRSF1A,PLEKHG6
SE_02_285500145 chr2:110099970-110116543 16573 145 3 42021717239 MALL,MIR4267,MIR4436B1
SE_02_285500146 chr19:53864582-53870560 5978 146 1 1321600482 MYADM,CACNG7,NLRP12,PRKCG
SE_02_285500147 chr17:8133705-8158831 25126 147 6 8543622922428 PER1,MIR6883,MIR4521,HES7,ALOXE3,BORCS6,ALOX12B,SNORD118,MIR4314,TMEM107,VAMP2
SE_02_285500148 chr11:69636284-69643558 7274 148 1 1872015334 CCND1,ORAOV1
SE_02_285500149 chr1:151193798-151199845 6047 149 1 14312402178 PIP5K1A,TNFAIP8L2-SCNM1,SCNM1,LYSMD1,TMOD4,SEMA6C,VPS72
SE_02_285500150 chr1:66258740-66302813 44073 150 12 115854911546 PDE4B
SE_02_285500151 chr19:42244577-42281967 37390 151 7 8894501421154 CIC,ERF,DEDD2,GSK3A,ZNF526,PRR19,PAFAH1B3,MEGF8,TMEM145
SE_02_285500152 chr13:110954377-110968090 13713 152 5 457871810 LINC00431,ANKRD10
SE_02_285500153 chr1:8873438-8900621 27183 153 7 8061540114370 ENO1,ENO1-AS1,CA6,MIR6728
SE_02_285500154 chr12:6960906-6965768 4862 154 1 17453159428 MIR200C,PHB2,PTPN6,MIR141,ENO2,SCARNA12,RNU7-1,C12ORF57,ATN1,EMG1
SE_02_285500155 chr1:31923029-31956598 33569 155 8 90617230217 PTP4A2
SE_02_285500156 chr1:29121425-29126217 4792 156 1 1146901441 TMEM200B
SE_02_285500157 chr17:50050437-50065662 15225 157 6 413144591022 ITGA3,LOC284080,PDK2
SE_02_285500158 chr17:7258945-7266326 7381 158 3 186256119859 ELP5,CLDN7,EIF5A,GABARAP,ACADVL,SLC2A4,DLG4,GPS2,PHF23,MIR324,CTDNEP1,YBX2,DVL2
SE_02_285500159 chr11:10647013-10670103 23090 159 7 680149468120 MRVI1
SE_02_285500160 chr3:139298862-139318408 19546 160 6 5361183330 MRPS22
SE_02_285500161 chr1:153564439-153569360 4921 161 1 1373300163 S100A2,S100A6,S100A4,S100A5,S100A3,S100A14,LOC101928034,S100A16
SE_02_285500162 chr7:73738010-73744536 6526 162 1 182124012258 ABHD11,MIR4284,STX1A,ABHD11-AS1,CLDN3
SE_02_285500163 chr17:78313667-78354068 40401 163 5 12495021510 LOC100996291,LOC101928674,PGS1,SOCS3
SE_02_285500164 chr3:49017414-49023168 5754 164 1 1371000381015 NDUFAF3,MIR191,DALRD3,MIR425,IMPDH2,P4HTM,WDR6
SE_02_285500165 chr16:1081858-1094047 12189 165 5 459119116840 C1QTNF8,SSTR5,SSTR5-AS1
SE_02_285500166 chr16:89993652-89997581 3929 166 1 18837300369 AFG3L1P,CENPBD1,DBNDD1,GAS8,DEF8,GAS8-AS1
SE_02_285500167 chr12:75850942-75910461 59519 167 22 1701436730 PHLDA1
SE_02_285500168 chr17:75871707-75879243 7536 168 3 21027322953 TRIM47,WBP2,MRPL38,UNC13D,TRIM65
SE_02_285500169 chr14:68125392-68158604 33212 169 8 8401611590 RAD51B
SE_02_285500170 chr1:94281539-94328366 46827 170 8 12851902510 ARHGAP29
SE_02_285500171 chr11:9355297-9365713 10416 171 3 308224000 TMEM41B,IPO7
SE_02_285500172 chr9:97982367-97985858 3491 172 1 1003000207 ANP32B,HEMGN
SE_02_285500173 chr8:125426172-125432540 6368 173 1 164102395 TRIB1
SE_02_285500174 chr21:37365233-37368918 3685 174 1 1011517149 DYRK1A
SE_02_285500175 chr2:8677340-8685965 8625 175 2 28223046312 ID2,ID2-AS1
SE_02_285500176 chr5:142354070-142365701 11631 176 4 331360160 LOC101926941,SPRY4,SPRY4-IT1
SE_02_285500177 chr4:74361383-74377725 16342 177 10 49963129122 EREG
SE_02_285500178 chr10:11874282-11899023 24741 178 4 92739450288 PROSER2-AS1
SE_02_285500179 chr8:125212778-125229182 16404 179 5 383520230 NSMCE2
SE_02_285500180 chr17_GL000205v2_random:86370-90594 4224 180 2 00000 MGC70870
SE_02_285500181 chr16:87944754-87952506 7752 181 2 2874511247 BANP,CA5A
SE_02_285500182 chrX:40091712-40110302 18590 182 6 2662076163 BCOR
SE_02_285500183 chr19:49869727-49879541 9814 183 2 333217181186 AKT1S1,TBC1D17,MIR6800,IL4I1,MIR4750,ATF5,PTOV1-AS2,PTOV1-AS1,MIR4749,NUP62,PTOV1,PNKP
SE_02_285500184 chr1:234599476-234611932 12456 184 4 3436120751 IRF2BP2,LOC101927787,LINC00184
SE_02_285500185 chr12:65487774-65511774 24000 185 5 649561740 LOC100507065
SE_02_285500186 chr9:21771048-21789884 18836 186 6 69817421520 MTAP
SE_02_285500187 chr1:154970065-154976309 6244 187 1 176533161507 SHC1,CKS1B,MIR4258,PMVK,PBXIP1,ZBTB7B,PYGO2,LENEP,FLAD1
SE_02_285500188 chr17:15948610-15967618 19008 188 9 6174500860 ADORA2B,ZSWIM7,TTC19
SE_02_285500189 chr17:81039842-81051718 11876 189 5 4951811530 BAIAP2,CHMP6,BAIAP2-AS1
SE_02_285500190 chr16:89558304-89566239 7935 190 2 37541222980 SNORD68,RPL13,SPG7,CPNE7,DPEP1
SE_02_285500191 chr2:181875676-181902610 26934 191 8 6081813615 SSFA2
SE_02_285500192 chr11:69294151-69303002 8851 192 4 30339114590 MYEOV
SE_02_285500193 chr12:75932075-75955547 23472 193 12 548201600 PHLDA1
SE_02_285500194 chr13:109242952-109272171 29219 194 7 928310560 MYO16-AS1
SE_02_285500195 chr11:64841599-64857926 16327 195 7 51518300946 CDC42BPG,EHD1,MEN1,MAP4K2,MIR6749,MIR192,MIR6750,MIR194-2
SE_02_285500196 chr1:202006273-202035918 29645 196 9 835189301498 ELF3,RNPEP,MIR6740
SE_02_285500197 chr14:104665647-104682855 17208 197 3 556114147102 MIR4710,ADSSL1,INF2
SE_02_285500198 chr7:1506030-1539227 33197 198 8 1313100121981150 MAFK,PSMG3,MICALL2,TMEM184A,PSMG3-AS1,INTS1
SE_02_285500199 chr1:149849221-149854181 4960 199 1 41805449 HIST2H2BC,HIST2H2AA4,HIST2H3C,HIST2H4B,BOLA1,HIST2H2AA3,HIST2H2BF,HIST2H3D,HIST2H3A,HIST2H2AB,HIST2H2BE,HIST2H2AC
SE_02_285500200 chr6:63570975-63574409 3434 200 1 99600226 PTP4A1
SE_02_285500201 chr9:37464122-37477500 13378 201 3 36886038133 ZBTB5,POLR1E,GRHPR
SE_02_285500202 chr1:244832635-244836780 4145 202 1 1112900203 COX20,HNRNPU,HNRNPU-AS1
SE_02_285500203 chr13:110907411-110916288 8877 203 5 285136016240 ANKRD10,LINC00346,LINC00431
SE_02_285500204 chr16:3019780-3024594 4814 204 1 155550631044 THOC6,TNFRSF12A,HCFC1R1,LOC100128770,CLDN9,PKMYT1,IL32,MMP25,MMP25-AS1,CLDN6,LOC101929613,LINC00514,CCDC64B
SE_02_285500205 chr17:51119744-51122914 3170 205 1 681405251 SPAG9,NME2,NME1,NME1-NME2
SE_02_285500206 chr19:14505099-14521279 16180 206 5 514172086589 DNAJB1,PTGER1,MIR639,GIPC1,TECR
SE_02_285500207 chr15:92800549-92832507 31958 207 8 990660390 ASB9P1
SE_02_285500208 chr1:149839266-149844419 5153 208 1 394810318 HIST2H2AA4,HIST2H3A,HIST2H4B,HIST2H3D,HIST2H2AA3,HIST2H2BF,HIST2H3C,HIST2H2AB,HIST2H2BE,HIST2H2AC,HIST2H2BC
SE_02_285500209 chr7:23465718-23474783 9065 209 3 2015404251 IGF2BP3,RPS2P32
SE_02_285500210 chr17:17681220-17695389 14169 210 3 3721460122193 RAI1,SMCR2
SE_02_285500211 chr21:6368504-6372725 4221 211 2 00000 CBS,U2AF1
SE_02_285500212 chr5:181242672-181248150 5478 212 1 19118400154 GNB2L1,CTC-338M12.4,SNORD95,SNORD96A,TRIM7,TRIM41,MIR4638,TRIM52-AS1,TRIM52
SE_02_285500213 chr1:154998953-155018158 19205 213 5 4031872831477 ZBTB7B,CKS1B,PBXIP1,SHC1,DCST2,PYGO2,LENEP,ADAM15,EFNA4,LOC100505666,MIR4258,FLAD1,DCST1
SE_02_285500214 chr17:77315685-77325653 9968 214 4 3412320240 SEPT9
SE_02_285500215 chr17:28742286-28747220 4934 215 2 1035510341 TRAF4,NEK8,SNORD4B,RAB34,TLCD1,PROCA1,SNORD42A,SNORD4A,SNORD42B,RPL23A
SE_02_285500216 chr7:73799592-73834270 34678 216 6 862782249904 CLDN4,WBSCR27,WBSCR28,CLDN3
SE_02_285500217 chr17:73290715-73310671 19956 217 6 624822130 CDC42EP4,CPSF4L
SE_02_285500218 chr17:81662720-81667988 5268 218 1 21486200534 OXLD1,CCDC137,TSPAN10,NPLOC4,HGS,ARL16,PDE6G,MRPL12,SLC25A10,MIR6786
SE_02_285500219 chr8_KI270816v1_alt:209155-217776 8621 219 4 00000 MIR4664,FAM83H-AS1,FAM83H
SE_02_285500220 chr20:50724366-50744595 20229 220 8 5306700227 PARD6B,FAM65C
SE_02_285500221 chr8:17836298-17856719 20421 221 8 8795281450 FGL1,MTUS1
SE_02_285500222 chr13:110711680-110715364 3684 222 1 1239900715 ING1,CARS2
SE_02_285500223 chr17:75683065-75707850 24785 223 8 6771715191033 SAP30BP,SMIM5,ITGB4,SMIM6,RECQL5
SE_02_285500224 chr7:116511056-116527314 16258 224 6 42124531455 CAV1,CAV2
SE_02_285500225 chr2:64830284-64840466 10182 225 3 263362160 LOC101927438
SE_02_285500226 chr21:15050868-15066723 15855 226 8 3811430226 NRIP1
SE_02_285500227 chr6:129664424-129689904 25480 227 9 6634231210 ARHGAP18
SE_02_285500228 chr10:125157938-125162536 4598 228 1 72300396 CTBP2
SE_02_285500229 chr1:1626126-1629860 3734 229 2 1866500861 MIB2,C1ORF233,MMP23B,CDK11B,MMP23A
SE_02_285500230 chr6:73566728-73586695 19967 230 4 6184242480 EEF1A1
SE_02_285500231 chr10:101031239-101043897 12658 231 2 314510241321 SFXN3,LZTS2,PDZD7,KAZALD1,C10ORF2,MRPL43
SE_02_285500232 chr10:86960924-86972712 11788 232 2 3953520471146 ADIRF,SNCG,AGAP11,FAM25A,MMRN2
SE_02_285500233 chr11:67371949-67380228 8279 233 2 173156069281 CLCF1,LOC100130987,RAD9A,PPP1CA,TBC1D10C,POLD4,RPS6KB2,CARNS1
SE_02_285500234 chr4:186722544-186736564 14020 234 4 37350056291 FAT1
SE_02_285500235 chr1:15833183-15850309 17126 235 4 486486413696 FLJ37453,SPEN,UQCRHL
SE_02_285500236 chr8:102805081-102810973 5892 236 4 1274508643 AZIN1
SE_02_285500237 chr20:3795412-3813684 18272 237 4 5623581371997 CDC25B,LOC101929125,CENPB,C20ORF27,AP5S1,MAVS,SPEF1
SE_02_285500238 chr17_GL383566v1_alt:70776-80624 9848 238 5 00000
SE_02_285500239 chr17:4944530-4950909 6379 239 2 205208014686 RNF167,PFN1,ENO3,CAMTA2,GP1BA,KIF1C,C17ORF107,MIR6865,SLC25A11,CHRNE,INCA1,MIR6864,SPAG7
SE_02_285500240 chr7:829842-834034 4192 240 1 1652751052 SUN1,GET4
SE_02_285500241 chr20:62349795-62365384 15589 241 7 631345016493 LAMA5,LAMA5-AS1,CABLES2,RPS21,MIR4758,ADRM1
SE_02_285500242 chr19:18409995-18418419 8424 242 2 219289020 GDF15,MIR3189,ISYNA1,LRRC25,SSBP4
SE_02_285500243 chr19:16069757-16080330 10573 243 2 3777230248 TPM4,LINC00905,RAB8A
SE_02_285500244 chr12:65529873-65539090 9217 244 3 27711000 LOC100507065
SE_02_285500245 chr19:2154622-2169810 15188 245 6 526262128161 DOT1L,AP3D1
SE_02_285500246 chr11:65914881-65920244 5363 246 1 16211600789 DRAP1,C11ORF68,TSGA10IP,CCDC85B,CTSW,EFEMP2,SART1,FIBP,FOSL1
SE_02_285500247 chr19:1161921-1194790 32869 247 10 1216239048146 SBNO2,STK11,ATP5D,CBARP
SE_02_285500248 chr4:168479477-168495137 15660 248 6 3544512095 DDX60L,PALLD
SE_02_285500249 chr19:48485548-48503148 17600 249 9 472154011872 LMTK3,GRWD1,KCNJ14,CYTH2,SULT2B1
SE_02_285500250 chr6:144896050-144927283 31233 250 8 9005131080 UTRN,STX11
SE_02_285500251 chr19:18363592-18381209 17617 251 6 5241883501142 PGPEP1,MIR3189,LRRC25,LSM4,SSBP4,GDF15
SE_02_285500252 chrX:46316118-46334492 18374 252 16 3942600138 LINC01186
SE_02_285500253 chr7:130838059-130855819 17760 253 6 495464490 MIR29A,MIR29B1
SE_02_285500254 chr5:82967889-82977606 9717 254 5 320512500 SCARNA18,TMEM167A
SE_02_285500255 chr1:172885204-172919909 34705 255 16 8101315360 TNFSF18
SE_02_285500256 chr12:6531246-6536468 5222 256 1 194221012461 GAPDH,NCAPD2,IFFO1,SCARNA11,MRPL51,NOP2,SCARNA10
SE_02_285500257 chr7:5548396-5571748 23352 257 7 8509701200 FSCN1,FBXL18,LOC221946,ACTB
SE_02_285500258 chr7:6442953-6451261 8308 258 2 308161032155 DAGLB,KDELR2
SE_02_285500259 chr19:47726255-47746147 19892 259 5 60032020779 GLTSCR2,EHD2,SNORD23,SEPW1,GLTSCR2-AS1
SE_02_285500260 chr17:21284654-21290100 5446 260 2 14918012238 MAP2K3,NATD1
SE_02_285500261 chr14:49632676-49636409 3733 261 1 146141127468 DNAAF2,RPS29,MGAT2,RN7SL1,LRR1,RPL36AL
SE_02_285500262 chr1:23553856-23563307 9451 262 3 34473123369 ID3,E2F2,LOC101928163
SE_02_285500263 chr12:49489554-49519506 29952 263 14 6943241126279 SPATS2,KCNH3,MCRS1
SE_02_285500264 chr7:105011524-105015304 3780 264 1 1301500585 KMT2E,KMT2E-AS1,LINC01004
SE_02_285500265 chr19:40417233-40434914 17681 265 4 483199164363 SERTAD1,SPTBN4,PRX,MIR6796,SERTAD3,BLVRB,HIPK4
SE_02_285500266 chr20:49674123-49701754 27631 266 5 738922330 B4GALT5
SE_02_285500267 chr8:144506890-144510218 3328 267 1 1146702417 GPT,MFSD3,KIFC2,CYHR1,RECQL4,PPP1R16A,LRRC24,LRRC14,C8ORF82,FOXH1
SE_02_285500268 chr2:218395653-218406979 11326 268 4 4251570421662 SLC11A1,CTDSP1,MIR26B,CATIP-AS2,CATIP,VIL1,CATIP-AS1
SE_02_285500269 chr5:179817642-179821860 4218 269 1 1022602177 SQSTM1,LTC4S,MGAT4B,C5ORF45,MIR1229
SE_02_285500270 chr22:37745560-37762594 17034 270 3 51544716897 TRIOBP,MIR5096,GCAT,H1F0
SE_02_285500271 chr20:47315608-47334930 19322 271 6 53018018407 ZMYND8,LOC100131496
SE_02_285500272 chr6:27836430-27840511 4081 272 1 112269310213 HIST1H2AK,HIST1H2BN,HIST1H2AL,HIST1H3I,HIST1H2BM,HIST1H2AJ,HIST1H2AI,HIST1H4K,HIST1H4L,HIST1H2BL,HIST1H4J,HIST1H1B,HIST1H3H
SE_02_285500273 chr1:223706309-223727553 21244 273 4 581335254317 CAPN2,CAPN8
SE_02_285500274 chr10:104117117-104121879 4762 274 1 106750475 COL17A1,SFR1
SE_02_285500275 chr6:26118369-26126948 8579 275 3 3026011251220 HIST1H2AC,HIST1H2BC,HFE,HIST1H2BD,HIST1H1E,HIST1H1T,HIST1H4C
SE_02_285500276 chr17:41771393-41801644 30251 276 5 831671287400 JUP,FKBP10,HAP1,P3H4,NT5C3B,KLHL10
SE_02_285500277 chr22:50281515-50307731 26216 277 7 9454681342096 PLXNB2,PPP6R2,MAPK11,TUBGCP6,DENND6B,HDAC10,MAPK12
SE_02_285500278 chr19:1099152-1107443 8291 278 4 340203245759 GPX4,POLR2E,HMHA1,SBNO2
SE_02_285500279 chr19:40602272-40624777 22505 279 10 631242102347 LTBP4,SHKBP1
SE_02_285500280 chr6:26052297-26066728 14431 280 2 453450628174 HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A
SE_02_285500281 chr2:70135085-70143521 8436 281 3 2742481350 PCBP1,LOC100133985,PCBP1-AS1,C2ORF42
SE_02_285500282 chr17:8246308-8250313 4005 282 1 11397015169 PFAS,CTC1,AURKB,SLC25A35,RANGRF,LINC00324
SE_02_285500283 chr1_KI270713v1_random:13565-28311 14746 283 3 00000 RNU1-1
SE_02_285500284 chr9:127917335-127933324 15989 284 3 3901211171037 PIP5KL1,ST6GALNAC6,ST6GALNAC4,FAM102A,MIR4672,DPM2,AK1
SE_02_285500285 chr6:158631479-158646956 15477 285 4 43513416684 DYNLT1,TMEM181,MIR7161,SYTL3
SE_02_285500286 chr1:26848282-26873218 24936 286 7 631372001258 ZDHHC18,SFN,GPATCH3,NUDC,GPN2,NR0B2
SE_02_285500287 chr10:3782627-3787096 4469 287 1 142807176 KLF6
SE_02_285500288 chr10:99619621-99622495 2874 288 1 587206204 SLC25A28,ENTPD7
SE_02_285500289 chr19:17311459-17340590 29131 289 5 866110961093730 DDA1,GTPBP3,ANO8,ABHD8,MRPL34,ANKLE1,BABAM1,PLVAP,USHBP1
SE_02_285500290 chr15:72227005-72238584 11579 290 4 269103012359 PKM,GRAMD2,PARP6
SE_02_285500291 chr1:156500170-156505982 5812 291 1 14646121222 MEF2D
SE_02_285500292 chr16:28807884-28825091 17207 292 3 4021290160536 ATXN2L,SH2B1,TUFM,MIR4721
SE_02_285500293 chr1:32757863-32763053 5190 293 3 13127010 KIAA1522
SE_02_285500294 chr9:96417053-96421702 4649 294 1 9757018286 ZNF367,HABP4,SLC35D2
SE_02_285500295 chr1:16727768-16750733 22965 295 4 1292202093 RNVU1-18,FAM231C,FAM231A,MST1L,ESPNP
SE_02_285500296 chr8:129682291-129711761 29470 296 8 8382322340 CCDC26
SE_02_285500297 chr9:127555221-127573859 18638 297 5 516408280208 FAM129B,STXBP1
SE_02_285500298 chr10:21525598-21530001 4403 298 1 9610656 SKIDA1,MLLT10,CASC10,MIR1915
SE_02_285500299 chr9:129406007-129414968 8961 299 4 29470920 LINC01503
SE_02_285500300 chr2:226045224-226066773 21549 300 10 577113210 LOC646736
SE_02_285500301 chr20:63681629-63700063 18434 301 6 892410602739 RTEL1,RTEL1-TNFRSF6B,TNFRSF6B,ARFRP1,ZGPAT,LIME1,STMN3,SLC2A4RG
SE_02_285500302 chr15:100712163-100727989 15826 302 4 572441170 ASB7
SE_02_285500303 chr12:65718979-65730270 11291 303 4 29743670 LOC100507065
SE_02_285500304 chr10:100996371-101000900 4529 304 1 101146420684 LZTS2,SEMA4G,PDZD7,SFXN3,MIR608,C10ORF2,MRPL43
SE_02_285500305 chr7:158817197-158823305 6108 305 1 17320317101 ESYT2,WDR60
SE_02_285500306 chr9:129549867-129571744 21877 306 4 700730330 NTMT1,C9ORF50
SE_02_285500307 chr19:55471183-55474826 3643 307 2 14639000 SSC5D,NAT14,ISOC2,ZNF628,SHISA7
SE_02_285500308 chr17:15642197-15659717 17520 308 6 45533400267 TRIM16,ZNF286A,CDRT1
SE_02_285500309 chr8:127292775-127308045 15270 309 5 4543160 CASC21,CASC8
SE_02_285500310 chr17:44814604-44832911 18307 310 8 474450072273 GJC1,HIGD1B
SE_02_285500311 chr12:52923784-52928323 4539 311 1 132251085 KRT8,KRT18
SE_02_285500312 chr19:4057832-4065952 8120 312 2 24337076149 ZBTB7A
SE_02_285500313 chr9:137610240-137614017 3777 313 1 14314100313 ARRDC1,ARRDC1-AS1,ZMYND19,DPH7,EHMT1
SE_02_285500314 chr6:27130612-27135152 4540 314 1 1959700195 HIST1H2AG,HIST1H2BJ,HIST1H2AH,HIST1H4I,MIR3143,HIST1H2BK
SE_02_285500315 chr2:231639857-231644694 4837 315 2 14616050 C2ORF57
SE_02_285500316 chr17:57935510-57953225 17715 316 6 446580140 CUEDC1,VEZF1
SE_02_285500317 chr14:104970068-104975126 5058 317 1 1595808101 AHNAK2,CDCA4,C14ORF79,PLD4
SE_02_285500318 chr3:156814992-156819634 4642 318 1 107101219127 LINC00886,LEKR1,PA2G4P4
SE_02_285500319 chr17:67418975-67441074 22099 319 4 611530450 PITPNC1,MIR548AA2,MIR548D2
SE_02_285500320 chr8:61758035-61767984 9949 320 4 315210153364 ASPH,MIR4470
SE_02_285500321 chr17:56913312-56917301 3989 321 1 991000206 TRIM25,MTVR2,COIL,MIR3614
SE_02_285500322 chr8:6584922-6603355 18433 322 4 833272130 MCPH1,MIR8055,ANGPT2
SE_02_285500323 chr14:55101818-55109450 7632 323 4 1591012310 LGALS3
SE_02_285500324 chr1:8113656-8138537 24881 324 6 8334911220 LOC102724539
SE_02_285500325 chr8_KI270816v1_alt:86048-112407 26359 325 4 00000 ZNF623,PYCRL,EEF1D,TSTA3,TIGD5
SE_02_285500326 chr20:53609880-53624964 15084 326 4 37740310 ZNF217
SE_02_285500327 chr22:30196433-30229368 32935 327 7 933622131190 OSM,LIF
SE_02_285500328 chr17:42667052-42680066 13014 328 2 2882640521961 PLEKHH3,CCR10,CNTNAP1,MIR6780A,TUBG2
SE_02_285500329 chr6:27890074-27896199 6125 329 1 17538836305 HIST1H3J,HIST1H2BO,HIST1H2AM,HIST1H2AL,HIST1H3I,HIST1H4L,OR2B2,HIST1H1B
SE_02_285500330 chr19:3562152-3578083 15931 330 5 481721621033 HMG20B,MFSD12,TBXA2R,GIPC3,C19ORF71,FZR1,CACTIN-AS1,CACTIN
SE_02_285500331 chr16:85610793-85615738 4945 331 3 166009289 GSE1
SE_02_285500332 chr19:45505298-45515221 9923 332 2 262143011185 VASP,PPM1N,FOSB,RTN2
SE_02_285500333 chr16:30063546-30067241 3695 333 1 9429017595 ALDOA,C16ORF92,FAM57B,PPP4C,YPEL3,DOC2A,TBX6,GDPD3

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM4985144
Input ID: Name:GSM4985153
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb