Sample overview
| Species: | Human |
| Biosample type: | Cell line |
| Tissue type: | lung |
| Data source: | NCBI GEO/SRA |
| Biosample name: | NCIH1048 DMSO |
| Sample ID: | Sample_02_1594 |
| SE ID | SE Region | Size | Rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_159400001 | chr1:183803154-183920917 |
117763 | 1 | 24 | 3177 | 415 | 17 | 392 | 866 | RGL1 |
| SE_02_159400002 | chr5:148163427-148211896 |
48469 | 2 | 3 | 1440 | 1272 | 11 | 220 | 300 | SPINK14,SPINK6 |
| SE_02_159400003 | chr6:20560412-20705232 |
144820 | 3 | 31 | 4015 | 262 | 80 | 371 | 89 | CDKAL1 |
| SE_02_159400004 | chr9:4020122-4148914 |
128792 | 4 | 20 | 5061 | 263 | 30 | 655 | 414 | GLIS3 |
| SE_02_159400005 | chr9:3908000-4007234 |
99234 | 5 | 19 | 3535 | 113 | 21 | 593 | 178 | GLIS3,GLIS3-AS1 |
| SE_02_159400006 | chr11:34584789-34675483 |
90694 | 6 | 13 | 2522 | 327 | 12 | 457 | 975 | EHF |
| SE_02_159400007 | chr5:170211833-170275059 |
63226 | 7 | 12 | 1589 | 280 | 4 | 242 | 1253 | C5ORF58,LCP2,LINC01187 |
| SE_02_159400008 | chr17:72118857-72185860 |
67003 | 8 | 14 | 1884 | 119 | 5 | 131 | 848 | SOX9-AS1,SOX9,LOC101928205 |
| SE_02_159400009 | chr9:73107501-73184945 |
77444 | 9 | 12 | 2190 | 198 | 12 | 350 | 494 | ANXA1 |
| SE_02_159400010 | chr7:96066483-96097585 |
31102 | 10 | 2 | 736 | 138 | 1 | 116 | 173 | DYNC1I1,MIR591 |
| SE_02_159400011 | chr11:120235308-120317322 |
82014 | 11 | 20 | 2257 | 303 | 12 | 241 | 1893 | POU2F3,LOC649133,TMEM136,ARHGEF12,OAF |
| SE_02_159400012 | chr5:170148290-170190779 |
42489 | 12 | 8 | 1358 | 112 | 4 | 87 | 0 | FOXI1,C5ORF58,LINC01187 |
| SE_02_159400013 | chr8:126819591-126891074 |
71483 | 13 | 11 | 2076 | 99 | 11 | 161 | 0 | PCAT1 |
| SE_02_159400014 | chr6:50815061-50854666 |
39605 | 14 | 8 | 967 | 63 | 10 | 258 | 1106 | TFAP2B |
| SE_02_159400015 | chr5:147948218-147973984 |
25766 | 15 | 3 | 742 | 136 | 7 | 26 | 0 | C5ORF46 |
| SE_02_159400016 | chr16:72989169-73071691 |
82522 | 16 | 13 | 2362 | 213 | 11 | 526 | 404 | ZFHX3,HCCAT5 |
| SE_02_159400017 | chr5:148090820-148121766 |
30946 | 17 | 7 | 874 | 693 | 0 | 59 | 711 | SPINK5,SPINK14 |
| SE_02_159400018 | chr5:124697376-124755587 |
58211 | 18 | 7 | 1467 | 38 | 11 | 235 | 400 | ZNF608 |
| SE_02_159400019 | chr5:124623995-124679772 |
55777 | 19 | 6 | 1496 | 70 | 2 | 231 | 769 | ZNF608 |
| SE_02_159400020 | chr6:124960218-125021701 |
61483 | 20 | 12 | 1564 | 133 | 6 | 141 | 418 | RNF217-AS1,RNF217 |
| SE_02_159400021 | chr17:59802789-59859990 |
57201 | 21 | 8 | 1308 | 987 | 3 | 87 | 404 | TUBD1,MIR21,VMP1,RPS6KB1 |
| SE_02_159400022 | chr7:18418807-18477726 |
58919 | 22 | 8 | 1626 | 36 | 3 | 168 | 55 | HDAC9 |
| SE_02_159400023 | chr12:52216410-52282124 |
65714 | 23 | 12 | 1893 | 896 | 12 | 190 | 2176 | LINC00592,KRT7,KRT80,KRT83,C12ORF80,KRT86,KRT81 |
| SE_02_159400024 | chr11:111297175-111312911 |
15736 | 24 | 1 | 417 | 302 | 3 | 87 | 890 | COLCA1,COLCA2,MIR4491,C11ORF53 |
| SE_02_159400025 | chr1:186833608-186879182 |
45574 | 25 | 11 | 1164 | 112 | 5 | 115 | 59 | PLA2G4A |
| SE_02_159400026 | chr12:25050339-25085551 |
35212 | 26 | 10 | 993 | 473 | 5 | 13 | 385 | LRMP |
| SE_02_159400027 | chr2:144423928-144481635 |
57707 | 27 | 10 | 1294 | 50 | 16 | 516 | 394 | ZEB2,ZEB2-AS1,LINC01412 |
| SE_02_159400028 | chr13:105051496-105106989 |
55493 | 28 | 11 | 1724 | 0 | 5 | 135 | 0 | DAOA |
| SE_02_159400029 | chr9:132967514-132997153 |
29639 | 29 | 6 | 1040 | 125 | 3 | 67 | 847 | GFI1B,MIR548AW,TSC1,GTF3C5 |
| SE_02_159400030 | chr1:66240241-66311759 |
71518 | 30 | 14 | 1869 | 84 | 10 | 154 | 151 | PDE4B |
| SE_02_159400031 | chr2:57866202-57903110 |
36908 | 31 | 8 | 952 | 82 | 5 | 46 | 0 | VRK2 |
| SE_02_159400032 | chrX:115843807-115889155 |
45348 | 32 | 16 | 28 | 0 | 0 | 0 | 0 | DANT2 |
| SE_02_159400033 | chr5:121682004-121719635 |
37631 | 33 | 5 | 1250 | 48 | 1 | 165 | 0 | FTMT |
| SE_02_159400034 | chr7:18619152-18691374 |
72222 | 34 | 13 | 1991 | 23 | 21 | 274 | 411 | HDAC9 |
| SE_02_159400035 | chr18:58043256-58118292 |
75036 | 35 | 15 | 2282 | 206 | 5 | 57 | 344 | NEDD4L |
| SE_02_159400036 | chr3:114434910-114458157 |
23247 | 36 | 4 | 523 | 6 | 1 | 156 | 0 | ZBTB20,LOC101929754 |
| SE_02_159400037 | chr4:70357268-70392463 |
35195 | 37 | 5 | 1031 | 620 | 5 | 8 | 364 | SMR3A,SMR3B,PROL1,CABS1,MUC7 |
| SE_02_159400038 | chr6:144641435-144662959 |
21524 | 38 | 4 | 539 | 15 | 0 | 50 | 0 | UTRN |
| SE_02_159400039 | chr15:80383639-80417258 |
33619 | 39 | 5 | 928 | 245 | 2 | 64 | 161 | ARNT2,LINC00927 |
| SE_02_159400040 | chr8:52457541-52483966 |
26425 | 40 | 3 | 860 | 174 | 3 | 0 | 0 | ST18 |
| SE_02_159400041 | chr7:5418318-5430529 |
12211 | 41 | 1 | 368 | 11 | 0 | 60 | 795 | TNRC18 |
| SE_02_159400042 | chr1:192311637-192359581 |
47944 | 42 | 5 | 1213 | 88 | 6 | 187 | 78 | RGS21 |
| SE_02_159400043 | chr1:163503252-163529500 |
26248 | 43 | 4 | 857 | 18 | 4 | 60 | 56 | LOC100422212 |
| SE_02_159400044 | chr5:121771542-121808515 |
36973 | 44 | 9 | 1149 | 7 | 6 | 163 | 0 | FTMT |
| SE_02_159400045 | chr12:16548964-16612874 |
63910 | 45 | 13 | 1454 | 36 | 4 | 220 | 783 | LMO3 |
| SE_02_159400046 | chr5:88659680-88681801 |
22121 | 46 | 6 | 480 | 53 | 4 | 167 | 758 | LINC00461,MIR9-2 |
| SE_02_159400047 | chr4:184446182-184475847 |
29665 | 47 | 4 | 756 | 119 | 4 | 29 | 102 | IRF2 |
| SE_02_159400048 | chr2:168525195-168602617 |
77422 | 48 | 13 | 2039 | 108 | 6 | 232 | 133 | MIR4774,CERS6 |
| SE_02_159400049 | chr8:106605823-106638870 |
33047 | 49 | 4 | 709 | 117 | 1 | 222 | 51 | OXR1 |
| SE_02_159400050 | chr7:31527278-31555791 |
28513 | 50 | 3 | 730 | 175 | 7 | 79 | 193 | CCDC129 |
| SE_02_159400051 | chr3:190314099-190353123 |
39024 | 51 | 7 | 1315 | 337 | 2 | 85 | 166 | CLDN1,CLDN16 |
| SE_02_159400052 | chr22:46052564-46081773 |
29209 | 52 | 6 | 817 | 201 | 4 | 42 | 646 | PRR34,PRR34-AS1,MIR3619,LINC00899,LOC730668,MIRLET7BHG,MIRLET7A3,MIR4763,MIRLET7B |
| SE_02_159400053 | chr7:18534695-18593899 |
59204 | 53 | 18 | 1609 | 10 | 1 | 268 | 235 | HDAC9 |
| SE_02_159400054 | chr9:3493609-3528167 |
34558 | 54 | 6 | 1027 | 129 | 0 | 202 | 131 | RFX3 |
| SE_02_159400055 | chr7:97015367-97028299 |
12932 | 55 | 1 | 327 | 41 | 1 | 0 | 449 | DLX5,DLX6,DLX6-AS1 |
| SE_02_159400056 | chr6:10510048-10559613 |
49565 | 56 | 8 | 1617 | 235 | 8 | 99 | 587 | GCNT2 |
| SE_02_159400057 | chr2:142968445-142989878 |
21433 | 57 | 3 | 560 | 71 | 1 | 13 | 119 | KYNU |
| SE_02_159400058 | chr17:43265809-43301376 |
35567 | 58 | 9 | 0 | 0 | 0 | 80 | 0 | RNU2-1,LINC00854 |
| SE_02_159400059 | chr6:3226597-3235565 |
8968 | 59 | 1 | 236 | 42 | 0 | 61 | 304 | TUBB2B,PSMG4,LOC100507194 |
| SE_02_159400060 | chr3:114542143-114598283 |
56140 | 60 | 10 | 1320 | 8 | 2 | 444 | 0 | ZBTB20 |
| SE_02_159400061 | chr5:170393977-170421497 |
27520 | 61 | 7 | 771 | 105 | 5 | 72 | 0 | CTD-2270F17.1,KCNIP1,KCNMB1 |
| SE_02_159400062 | chr11:92482151-92507286 |
25135 | 62 | 4 | 656 | 8 | 0 | 112 | 0 | FAT3 |
| SE_02_159400063 | chr12:121796247-121812581 |
16334 | 63 | 3 | 444 | 256 | 0 | 4 | 1717 | SETD1B,LINC01089,RHOF,HPD |
| SE_02_159400064 | chr5:4541084-4578694 |
37610 | 64 | 6 | 1092 | 1 | 0 | 80 | 0 | LOC101929153 |
| SE_02_159400065 | chr7:96296325-96327237 |
30912 | 65 | 5 | 729 | 139 | 0 | 100 | 249 | SLC25A13 |
| SE_02_159400066 | chr1:99631184-99677569 |
46385 | 66 | 6 | 1311 | 201 | 0 | 59 | 172 | MIR548N,PALMD |
| SE_02_159400067 | chr7:14216987-14252617 |
35630 | 67 | 6 | 1118 | 2 | 3 | 180 | 0 | DGKB,ETV1 |
| SE_02_159400068 | chr1:77390916-77422331 |
31415 | 68 | 7 | 834 | 129 | 4 | 76 | 54 | AK5 |
| SE_02_159400069 | chr7:96120773-96151946 |
31173 | 69 | 6 | 718 | 80 | 1 | 146 | 245 | SLC25A13,MIR591 |
| SE_02_159400070 | chr4:70485795-70506046 |
20251 | 70 | 4 | 652 | 343 | 1 | 18 | 0 | MUC7,AMTN |
| SE_02_159400071 | chr17:8886271-8917066 |
30795 | 71 | 4 | 862 | 123 | 3 | 137 | 1320 | PIK3R5,PIK3R6 |
| SE_02_159400072 | chr2:57744147-57762019 |
17872 | 72 | 2 | 472 | 39 | 2 | 2 | 0 | VRK2 |
| SE_02_159400073 | chr7:16460747-16495731 |
34984 | 73 | 5 | 1055 | 242 | 5 | 68 | 239 | SOSTDC1,ISPD,LRRC72 |
| SE_02_159400074 | chr21:34521718-34561958 |
40240 | 74 | 8 | 1282 | 340 | 2 | 86 | 142 | RCAN1,KCNE1 |
| SE_02_159400075 | chr5:51366511-51397770 |
31259 | 75 | 5 | 798 | 9 | 2 | 86 | 1321 | ISL1,LOC642366 |
| SE_02_159400076 | chr1:116372827-116419551 |
46724 | 76 | 13 | 1161 | 175 | 4 | 152 | 2289 | ATP1A1-AS1,ATP1A1 |
| SE_02_159400077 | chr1:192625651-192638265 |
12614 | 77 | 3 | 321 | 40 | 6 | 16 | 70 | RGS13,RGS1 |
| SE_02_159400078 | chr12:14389107-14418984 |
29877 | 78 | 4 | 706 | 79 | 4 | 26 | 0 | ATF7IP |
| SE_02_159400079 | chr16:72913900-72953923 |
40023 | 79 | 6 | 1311 | 144 | 4 | 246 | 140 | ZFHX3 |
| SE_02_159400080 | chr4:184384362-184418382 |
34020 | 80 | 6 | 1055 | 85 | 9 | 14 | 440 | IRF2,LOC728175,LOC102723766 |
| SE_02_159400081 | chr6:154228646-154248867 |
20221 | 81 | 3 | 565 | 22 | 2 | 9 | 108 | IPCEF1,OPRM1 |
| SE_02_159400082 | chr1:23553314-23569829 |
16515 | 82 | 2 | 523 | 103 | 1 | 25 | 369 | ID3,E2F2,LOC101928163 |
| SE_02_159400083 | chr2:57710611-57726887 |
16276 | 83 | 1 | 433 | 28 | 2 | 4 | 0 | VRK2 |
| SE_02_159400084 | chr3:73766671-73793566 |
26895 | 84 | 4 | 806 | 17 | 0 | 142 | 0 | PDZRN3 |
| SE_02_159400085 | chr3:20679554-20724849 |
45295 | 85 | 6 | 1211 | 54 | 4 | 0 | 0 | LOC101927829 |
| SE_02_159400086 | chr8:13078569-13123297 |
44728 | 86 | 9 | 1769 | 118 | 5 | 171 | 1144 | DLC1 |
| SE_02_159400087 | chr5:95695485-95734305 |
38820 | 87 | 6 | 918 | 321 | 1 | 55 | 395 | RHOBTB3,RFESD,SPATA9 |
| SE_02_159400088 | chr4:41417889-41465608 |
47719 | 88 | 9 | 1179 | 87 | 4 | 151 | 0 | LIMCH1 |
| SE_02_159400089 | chr10:123475499-123515180 |
39681 | 89 | 9 | 1195 | 55 | 7 | 58 | 0 | GPR26,BUB3 |
| SE_02_159400090 | chr6:21500256-21552930 |
52674 | 90 | 7 | 1261 | 129 | 1 | 186 | 0 | LINC00581,SOX4 |
| SE_02_159400091 | chr12:53992925-54006682 |
13757 | 91 | 1 | 344 | 136 | 0 | 120 | 424 | HOXC-AS2,HOXC9,HOXC-AS1,HOXC12,HOTAIR,HOXC4,HOXC11,HOXC5,HOXC6,HOXC8,MIR196A2,HOXC10,MIR615,HOXC-AS3 |
| SE_02_159400092 | chr11:58150289-58176015 |
25726 | 92 | 3 | 656 | 366 | 7 | 0 | 0 | OR9Q1,OR1S1,OR9I1,OR9Q2,OR1S2 |
| SE_02_159400093 | chr12:12716107-12726801 |
10694 | 93 | 2 | 314 | 64 | 2 | 10 | 578 | CDKN1B,APOLD1,MIR613,GPR19 |
| SE_02_159400094 | chr9:76010690-76049802 |
39112 | 94 | 7 | 1033 | 36 | 6 | 89 | 98 | PCSK5 |
| SE_02_159400095 | chr2:8675825-8686081 |
10256 | 95 | 2 | 345 | 25 | 0 | 47 | 312 | ID2,ID2-AS1 |
| SE_02_159400096 | chr20:6533060-6583274 |
50214 | 96 | 7 | 1258 | 32 | 2 | 237 | 0 | CASC20 |
| SE_02_159400097 | chr7:18491509-18521447 |
29938 | 97 | 9 | 729 | 3 | 2 | 86 | 169 | HDAC9 |
| SE_02_159400098 | chr12:92286242-92311030 |
24788 | 98 | 5 | 687 | 62 | 5 | 80 | 0 | CLLU1 |
| SE_02_159400099 | chr3:87955287-88002945 |
47658 | 99 | 11 | 1243 | 399 | 4 | 34 | 272 | HTR1F |
| SE_02_159400100 | chr8:23899523-23936119 |
36596 | 100 | 6 | 1002 | 58 | 4 | 42 | 0 | STC1 |
| SE_02_159400101 | chr2:105609465-105635250 |
25785 | 101 | 3 | 829 | 114 | 3 | 45 | 70 | LOC285000 |
| SE_02_159400102 | chr5:50963085-50971724 |
8639 | 102 | 1 | 235 | 73 | 1 | 4 | 0 | LOC100287592 |
| SE_02_159400103 | chr6:154380175-154428505 |
48330 | 103 | 10 | 1397 | 210 | 6 | 82 | 469 | CNKSR3,IPCEF1 |
| SE_02_159400104 | chr1:173254966-173277744 |
22778 | 104 | 3 | 472 | 46 | 3 | 14 | 0 | LOC100506023,TNFSF4 |
| SE_02_159400105 | chr4:73587440-73610682 |
23242 | 105 | 3 | 626 | 166 | 1 | 7 | 96 | RASSF6 |
| SE_02_159400106 | chr7:96183101-96214100 |
30999 | 106 | 5 | 738 | 80 | 1 | 33 | 256 | SLC25A13,MIR591 |
| SE_02_159400107 | chr5:174479661-174515921 |
36260 | 107 | 4 | 1077 | 60 | 2 | 11 | 0 | LINC01411,MSX2 |
| SE_02_159400108 | chr18:68796498-68846552 |
50054 | 108 | 13 | 1367 | 216 | 5 | 75 | 233 | CCDC102B,RNU6-39P |
| SE_02_159400109 | chr3:73497095-73524677 |
27582 | 109 | 7 | 780 | 106 | 2 | 224 | 0 | PDZRN3,LOC101927296 |
| SE_02_159400110 | chr15:42264384-42281256 |
16872 | 110 | 3 | 507 | 364 | 2 | 74 | 425 | TMEM87A,GANC |
| SE_02_159400111 | chr15:87740864-87765543 |
24679 | 111 | 7 | 871 | 3 | 0 | 43 | 0 | LINC00052 |
| SE_02_159400112 | chr3:114627137-114687415 |
60278 | 112 | 13 | 1355 | 19 | 6 | 108 | 32 | ZBTB20 |
| SE_02_159400113 | chr11:45753104-45777991 |
24887 | 113 | 4 | 746 | 332 | 1 | 67 | 243 | DKFZP779M0652,SLC35C1,LOC100507384 |
| SE_02_159400114 | chr1:164558228-164613735 |
55507 | 114 | 11 | 1282 | 11 | 4 | 489 | 304 | PBX1 |
| SE_02_159400115 | chr4:153071371-153094829 |
23458 | 115 | 5 | 713 | 173 | 9 | 122 | 0 | TRIM2 |
| SE_02_159400116 | chr9:6220102-6245174 |
25072 | 116 | 4 | 691 | 87 | 14 | 26 | 27 | IL33 |
| SE_02_159400117 | chr1:116308421-116334045 |
25624 | 117 | 4 | 696 | 29 | 0 | 30 | 0 | ATP1A1 |
| SE_02_159400118 | chr6:21587024-21598435 |
11411 | 118 | 2 | 268 | 3 | 0 | 205 | 750 | SOX4 |
| SE_02_159400119 | chr20:32018329-32044245 |
25916 | 119 | 5 | 617 | 179 | 2 | 87 | 912 | CCM2L,HCK |
| SE_02_159400120 | chr6:51196390-51216787 |
20397 | 120 | 2 | 0 | 20 | 0 | 40 | 0 | TFAP2B |
| SE_02_159400121 | chr12:53979807-53992533 |
12726 | 121 | 1 | 354 | 103 | 0 | 85 | 558 | MIR196A2,HOXC-AS3,HOXC10,HOXC12,HOTAIR,HOXC4,HOXC11,HOXC-AS2,HOXC13,HOXC9,HOXC6,HOXC8,HOXC-AS1,HOXC13-AS,HOXC5,MIR615 |
| SE_02_159400122 | chr5:121618715-121635546 |
16831 | 122 | 3 | 480 | 6 | 1 | 42 | 0 | FTMT |
| SE_02_159400123 | chr1:234599431-234614619 |
15188 | 123 | 3 | 420 | 67 | 2 | 0 | 751 | IRF2BP2,LOC101927787,LINC00184 |
| SE_02_159400124 | chr1:103329639-103349566 |
19927 | 124 | 2 | 0 | 139 | 0 | 80 | 0 | LOC101928436 |
| SE_02_159400125 | chr1:182119210-182124476 |
5266 | 125 | 1 | 114 | 15 | 0 | 0 | 0 | ZNF648 |
| SE_02_159400126 | chr3:133355251-133384711 |
29460 | 126 | 5 | 841 | 137 | 7 | 77 | 400 | TMEM108,BFSP2,TMEM108-AS1 |
| SE_02_159400127 | chr10:78895599-78917894 |
22295 | 127 | 5 | 725 | 33 | 3 | 79 | 0 | ZMIZ1-AS1 |
| SE_02_159400128 | chr4:169115410-169147330 |
31920 | 128 | 6 | 826 | 87 | 4 | 19 | 410 | SH3RF1,CBR4 |
| SE_02_159400129 | chr1:17939882-17969545 |
29663 | 129 | 6 | 991 | 15 | 5 | 0 | 0 | LOC101927876,IGSF21 |
| SE_02_159400130 | chr3:134356206-134389303 |
33097 | 130 | 6 | 937 | 223 | 5 | 156 | 1573 | AMOTL2,MIR6827,MIR4788 |
| SE_02_159400131 | chr1:31760825-31790035 |
29210 | 131 | 6 | 710 | 78 | 1 | 47 | 162 | ADGRB2,MIR4254,SPOCD1 |
| SE_02_159400132 | chr22:29076462-29104923 |
28461 | 132 | 6 | 710 | 426 | 3 | 27 | 111 | KREMEN1,ZNRF3-AS1,C22ORF31 |
| SE_02_159400133 | chr1:149884232-149889373 |
5141 | 133 | 1 | 125 | 42 | 0 | 66 | 498 | HIST2H2AB,HIST2H2AC,HIST2H2BE,BOLA1,MTMR11,HIST2H2AA3,HIST2H2BC,HIST2H3A,SV2A,HIST2H2AA4,SF3B4,HIST2H3C |
| SE_02_159400134 | chr11:134063909-134098263 |
34354 | 134 | 10 | 995 | 654 | 1 | 72 | 122 | JAM3,LOC100128239 |
| SE_02_159400135 | chr9:68521218-68563171 |
41953 | 135 | 8 | 1030 | 347 | 8 | 0 | 799 | TMEM252,LINC01506,PGM5 |
| SE_02_159400136 | chr15:74635584-74675131 |
39547 | 136 | 8 | 841 | 439 | 2 | 54 | 319 | EDC3,CLK3 |
| SE_02_159400137 | chr11:90834284-90852750 |
18466 | 137 | 2 | 555 | 13 | 3 | 7 | 42 | DISC1FP1,MIR1261 |
| SE_02_159400138 | chr20:32066703-32092880 |
26177 | 138 | 6 | 711 | 269 | 3 | 47 | 785 | HCK,TM9SF4 |
| SE_02_159400139 | chr1:204065511-204094406 |
28895 | 139 | 6 | 803 | 83 | 2 | 139 | 244 | SOX13,LINC00303,LOC101929441 |
| SE_02_159400140 | chr6:51260138-51303799 |
43661 | 140 | 9 | 1255 | 13 | 6 | 163 | 0 | LOC101927082,TFAP2B |
| SE_02_159400141 | chr14:77024470-77044484 |
20014 | 141 | 4 | 534 | 262 | 7 | 36 | 887 | IRF2BPL,LOC283575,LOC102724190 |
| SE_02_159400142 | chr4:137123248-137170987 |
47739 | 142 | 10 | 1411 | 50 | 3 | 61 | 0 | PCDH18 |
| SE_02_159400143 | chr3:155107833-155117637 |
9804 | 143 | 1 | 263 | 11 | 1 | 10 | 90 | MME |
| SE_02_159400144 | chr10:62034399-62051106 |
16707 | 144 | 3 | 410 | 20 | 3 | 30 | 122 | ARID5B |
| SE_02_159400145 | chr2:191470763-191521719 |
50956 | 145 | 9 | 1513 | 42 | 3 | 161 | 0 | NABP1 |
| SE_02_159400146 | chr5:147507608-147536366 |
28758 | 146 | 5 | 768 | 30 | 1 | 11 | 209 | DPYSL3,JAKMIP2-AS1 |
| SE_02_159400147 | chr17:59753270-59789342 |
36072 | 147 | 7 | 724 | 577 | 3 | 29 | 70 | VMP1,PTRH2 |
| SE_02_159400148 | chr18:26648954-26660993 |
12039 | 148 | 2 | 349 | 226 | 2 | 20 | 69 | KCTD1,PCAT18 |
| SE_02_159400149 | chr20:47348529-47361699 |
13170 | 149 | 5 | 309 | 8 | 4 | 13 | 706 | ZMYND8,LOC100131496 |
| SE_02_159400150 | chr1:149839095-149844552 |
5457 | 150 | 1 | 41 | 69 | 1 | 0 | 318 | HIST2H2AA4,HIST2H3A,HIST2H4B,HIST2H3D,HIST2H2AA3,HIST2H2BF,HIST2H3C,HIST2H2AB,HIST2H2BE,HIST2H2AC,HIST2H2BC |
| SE_02_159400151 | chr1:244857006-244865363 |
8357 | 151 | 3 | 250 | 34 | 0 | 0 | 608 | HNRNPU,COX20,HNRNPU-AS1 |
| SE_02_159400152 | chr10:123147581-123156629 |
9048 | 152 | 1 | 244 | 22 | 0 | 19 | 745 | HMX2,BUB3,HMX3 |
| SE_02_159400153 | chr1:149849864-149854753 |
4889 | 153 | 1 | 25 | 8 | 0 | 3 | 449 | HIST2H2BC,HIST2H2AA4,HIST2H3C,HIST2H4B,BOLA1,HIST2H2AA3,HIST2H2BF,HIST2H3D,HIST2H3A,HIST2H2AB,HIST2H2BE,HIST2H2AC |
| SE_02_159400154 | chr2:234951355-235009808 |
58453 | 154 | 9 | 1924 | 57 | 2 | 63 | 502 | SH3BP4 |
| SE_02_159400155 | chr19:1239648-1267342 |
27694 | 155 | 6 | 1017 | 138 | 1 | 284 | 2145 | ATP5D,MIDN,C19ORF24,CIRBP,CIRBP-AS1,STK11,CBARP,EFNA2 |
| SE_02_159400156 | chr1:116166674-116180043 |
13369 | 156 | 2 | 398 | 34 | 0 | 10 | 0 | MAB21L3 |
| SE_02_159400157 | chr7:27162946-27173628 |
10682 | 157 | 1 | 327 | 104 | 0 | 216 | 903 | MIR196B,HOXA10,HOXA10-HOXA9,HOXA10-AS,HOXA9,HOXA11,HOXA-AS3,HOTTIP,HOXA-AS2,HOXA7,HOXA3,HOXA5,HOXA4,HOXA13,HOXA6,HOXA11-AS |
| SE_02_159400158 | chr1:116220467-116230245 |
9778 | 158 | 2 | 284 | 29 | 0 | 40 | 0 | MAB21L3 |
| SE_02_159400159 | chr9:97979821-97985664 |
5843 | 159 | 1 | 147 | 52 | 1 | 0 | 207 | ANP32B,HEMGN |
| SE_02_159400160 | chr20:31603076-31612942 |
9866 | 160 | 1 | 393 | 473 | 3 | 44 | 381 | MIR3193,ID1,COX4I2,HM13-AS1 |
| SE_02_159400161 | chr6:145528651-145562101 |
33450 | 161 | 8 | 842 | 571 | 1 | 72 | 0 | LOC100507557 |
| SE_02_159400162 | chr5:74626568-74649636 |
23068 | 162 | 7 | 584 | 108 | 0 | 65 | 966 | ENC1,HEXB |
| SE_02_159400163 | chr11:57882853-57906011 |
23158 | 163 | 5 | 595 | 606 | 0 | 44 | 0 | OR9Q1 |
| SE_02_159400164 | chr3:171771223-171798156 |
26933 | 164 | 4 | 702 | 95 | 6 | 5 | 0 | PLD1,TMEM212 |
| SE_02_159400165 | chr11:65476413-65505488 |
29075 | 165 | 6 | 862 | 1233 | 3 | 160 | 811 | MALAT1,SCYL1,MIR612 |
| SE_02_159400166 | chr2:231705978-231713036 |
7058 | 166 | 1 | 288 | 63 | 1 | 0 | 880 | PTMA,MIR1244-2 |
| SE_02_159400167 | chrX:115727649-115737689 |
10040 | 167 | 4 | 0 | 0 | 0 | 15 | 0 | PLS3 |
| SE_02_159400168 | chr3:155007074-155019227 |
12153 | 168 | 3 | 322 | 66 | 0 | 45 | 0 | MME |
| SE_02_159400169 | chr17:43231530-43252410 |
20880 | 169 | 7 | 0 | 7 | 0 | 126 | 0 | RNU2-1,TMEM106A,LINC00854 |
| SE_02_159400170 | chr4:7955072-7987142 |
32070 | 170 | 4 | 1124 | 147 | 2 | 41 | 592 | ABLIM2,LOC389199,MIR95,AFAP1 |
| SE_02_159400171 | chr21:9648063-9664345 |
16282 | 171 | 5 | 0 | 1 | 0 | 0 | 0 | MGC39584 |
| SE_02_159400172 | chr1:187827329-187855870 |
28541 | 172 | 5 | 898 | 0 | 4 | 95 | 0 | LINC01037 |
| SE_02_159400173 | chr1:226061031-226065440 |
4409 | 173 | 1 | 117 | 18 | 0 | 23 | 205 | H3F3AP4,H3F3A |
| SE_02_159400174 | chr7:3899230-3922410 |
23180 | 174 | 3 | 1087 | 82 | 0 | 48 | 0 | SDK1 |
| SE_02_159400175 | chr22:35503285-35526099 |
22814 | 175 | 6 | 647 | 51 | 2 | 31 | 0 | RASD2 |
| SE_02_159400176 | chr14:56805397-56816681 |
11284 | 176 | 2 | 254 | 6 | 0 | 0 | 388 | OTX2,OTX2-AS1 |
| SE_02_159400177 | chr1:228486224-228491553 |
5329 | 177 | 1 | 157 | 63 | 0 | 21 | 490 | RNF187,BTNL10,HIST3H2BB,MIR4666A,HIST3H2A |
| SE_02_159400178 | chr11:48017173-48056224 |
39051 | 178 | 7 | 977 | 366 | 4 | 110 | 0 | PTPRJ,MIR3161 |
| SE_02_159400179 | chr4:90047103-90065802 |
18699 | 179 | 2 | 450 | 106 | 2 | 0 | 0 | CCSER1 |
| SE_02_159400180 | chr15:40068630-40105775 |
37145 | 180 | 6 | 1172 | 740 | 8 | 121 | 874 | BMF,SRP14,SRP14-AS1 |
| SE_02_159400181 | chr1:185309266-185319351 |
10085 | 181 | 3 | 242 | 28 | 0 | 23 | 207 | IVNS1ABP,GS1-279B7.1 |
| SE_02_159400182 | chr3:141383019-141413380 |
30361 | 182 | 4 | 671 | 74 | 8 | 22 | 284 | ZBTB38,RASA2 |
| SE_02_159400183 | chr2:60530170-60556951 |
26781 | 183 | 6 | 559 | 47 | 2 | 170 | 245 | BCL11A |
| SE_02_159400184 | chr10:89073392-89087468 |
14076 | 184 | 4 | 354 | 83 | 1 | 0 | 0 | MIR4679-1,MIR4679-2 |
| SE_02_159400185 | chr18:79438934-79478812 |
39878 | 185 | 6 | 1838 | 315 | 1 | 0 | 583 | NFATC1 |
| SE_02_159400186 | chr2:57795199-57816722 |
21523 | 186 | 4 | 504 | 58 | 0 | 10 | 0 | VRK2 |
| SE_02_159400187 | chr6:27889308-27896580 |
7272 | 187 | 1 | 204 | 402 | 3 | 6 | 305 | HIST1H3J,HIST1H2BO,HIST1H2AM,HIST1H2AL,HIST1H3I,HIST1H4L,OR2B2,HIST1H1B |
| SE_02_159400188 | chr15:68816463-68821710 |
5247 | 188 | 1 | 119 | 2 | 0 | 10 | 135 | ANP32A,MIR4312,ANP32A-IT1 |
| SE_02_159400189 | chr21:6548557-6575588 |
27031 | 189 | 5 | 0 | 0 | 0 | 0 | 0 | CRYAA,U2AF1 |
| SE_02_159400190 | chr1:154998782-155018479 |
19697 | 190 | 2 | 412 | 187 | 2 | 87 | 1574 | ZBTB7B,CKS1B,PBXIP1,SHC1,DCST2,PYGO2,LENEP,ADAM15,EFNA4,LOC100505666,MIR4258,FLAD1,DCST1 |
| SE_02_159400191 | chr17:81386733-81404304 |
17571 | 191 | 3 | 582 | 162 | 1 | 0 | 261 | BAHCC1,MIR4740,LOC100130370,MIR3186 |
| SE_02_159400192 | chr5:174531569-174571809 |
40240 | 192 | 6 | 1206 | 147 | 11 | 17 | 0 | MSX2 |
| SE_02_159400193 | chr11:118909779-118930603 |
20824 | 193 | 4 | 477 | 236 | 3 | 139 | 334 | BCL9L,MIR4492,CXCR5,UPK2,FOXR1 |
| SE_02_159400194 | chr1:16895113-16914865 |
19752 | 194 | 3 | 749 | 706 | 0 | 0 | 61 | RNVU1-18,CROCC |
| SE_02_159400195 | chr1:26691853-26700293 |
8440 | 195 | 3 | 174 | 80 | 1 | 8 | 569 | ARID1A |
| SE_02_159400196 | chr17:10827017-10845378 |
18361 | 196 | 3 | 519 | 54 | 3 | 48 | 81 | PIRT,LINC00675 |
| SE_02_159400197 | chr10:78964538-78975495 |
10957 | 197 | 4 | 305 | 9 | 0 | 27 | 0 | ZMIZ1-AS1 |
| SE_02_159400198 | chr1:174870859-174877906 |
7047 | 198 | 1 | 168 | 101 | 0 | 0 | 161 | RABGAP1L |
| SE_02_159400199 | chr11:57969505-57980908 |
11403 | 199 | 3 | 295 | 263 | 0 | 30 | 0 | OR9Q1 |
| SE_02_159400200 | chr18:3446397-3455125 |
8728 | 200 | 1 | 253 | 16 | 1 | 152 | 626 | TGIF1,GAPLINC |
| SE_02_159400201 | chr5:112943892-112979624 |
35732 | 201 | 5 | 1178 | 462 | 2 | 0 | 128 | DCP2,REEP5 |
| SE_02_159400202 | chr2:70084729-70089444 |
4715 | 202 | 1 | 156 | 53 | 0 | 1 | 654 | PCBP1-AS1,PCBP1,LOC100133985 |
| SE_02_159400203 | chr8:100947722-100954476 |
6754 | 203 | 2 | 197 | 31 | 0 | 0 | 663 | YWHAZ |
| SE_02_159400204 | chr4:40699743-40719143 |
19400 | 204 | 3 | 533 | 35 | 2 | 12 | 0 | NSUN7 |
| SE_02_159400205 | chr4:142352723-142407005 |
54282 | 205 | 8 | 1376 | 162 | 0 | 50 | 98 | INPP4B |
| SE_02_159400206 | chr12:124913467-124940726 |
27259 | 206 | 4 | 982 | 72 | 4 | 27 | 790 | MIR5188,UBC,SCARB1,DHX37 |
| SE_02_159400207 | chr14:22974852-22985859 |
11007 | 207 | 1 | 290 | 264 | 0 | 118 | 769 | AJUBA,PRMT5,PSMB5,MIR4707,HAUS4,C14ORF93,LOC101926933 |
| SE_02_159400208 | chr7:74656285-74660975 |
4690 | 208 | 1 | 86 | 29 | 0 | 0 | 185 | GTF2I |
| SE_02_159400209 | chr1:214439237-214448659 |
9422 | 209 | 2 | 250 | 22 | 1 | 2 | 0 | PTPN14 |
| SE_02_159400210 | chr3:191290343-191302835 |
12492 | 210 | 2 | 375 | 185 | 2 | 8 | 0 | UTS2B,CCDC50 |
| SE_02_159400211 | chr1:15833573-15850258 |
16685 | 211 | 2 | 472 | 478 | 4 | 11 | 696 | FLJ37453,SPEN,UQCRHL |
| SE_02_159400212 | chr11:2247804-2270620 |
22816 | 212 | 5 | 734 | 163 | 4 | 0 | 472 | ASCL2,TSPAN32,C11ORF21 |
| SE_02_159400213 | chr11:61964748-61975264 |
10516 | 213 | 3 | 247 | 48 | 1 | 0 | 603 | FTH1,RAB3IL1,BEST1 |
| SE_02_159400214 | chr6:156769282-156780721 |
11439 | 214 | 2 | 254 | 11 | 0 | 113 | 594 | MIR4466,ARID1B |
| SE_02_159400215 | chr1:226109677-226125141 |
15464 | 215 | 3 | 349 | 194 | 0 | 44 | 0 | H3F3A,H3F3AP4 |
| SE_02_159400216 | chr10:62074708-62107912 |
33204 | 216 | 4 | 864 | 57 | 8 | 35 | 792 | ARID5B |
| SE_02_159400217 | chr10:123134604-123140388 |
5784 | 217 | 1 | 160 | 11 | 0 | 6 | 435 | HMX3,HMX2,BUB3 |
| SE_02_159400218 | chr2:177261798-177267082 |
5284 | 218 | 1 | 122 | 50 | 0 | 38 | 403 | NFE2L2,MIR4444-1,MIR3128,MIR6512,HNRNPA3 |
| SE_02_159400219 | chr20:57467872-57495464 |
27592 | 219 | 5 | 892 | 118 | 15 | 0 | 81 | CTCFL |
| SE_02_159400220 | chr2:110857720-110873637 |
15917 | 220 | 4 | 436 | 77 | 6 | 28 | 0 | ACOXL,BUB1 |
| SE_02_159400221 | chr3:133208888-133214993 |
6105 | 221 | 1 | 148 | 24 | 1 | 0 | 0 | TMEM108,TMEM108-AS1 |
| SE_02_159400222 | chrX:15497424-15527064 |
29640 | 222 | 6 | 556 | 107 | 0 | 75 | 470 | BMX,PIR,PIR-FIGF |
| SE_02_159400223 | chr1:182388181-182397791 |
9610 | 223 | 2 | 258 | 185 | 1 | 0 | 575 | GLUL,LINC00272,TEDDM1 |
| SE_02_159400224 | chr9:70412452-70421827 |
9375 | 224 | 2 | 211 | 34 | 0 | 0 | 367 | KLF9 |
| SE_02_159400225 | chr1:198927028-198938151 |
11123 | 225 | 4 | 257 | 9 | 0 | 18 | 53 | MIR181A1HG |
| SE_02_159400226 | chr6:18379648-18404428 |
24780 | 226 | 4 | 681 | 237 | 2 | 78 | 161 | RNF144B |
| SE_02_159400227 | chr14:56702895-56716875 |
13980 | 227 | 3 | 395 | 8 | 5 | 11 | 0 | OTX2 |
| SE_02_159400228 | chr2:142117274-142133360 |
16086 | 228 | 3 | 477 | 85 | 1 | 12 | 213 | LRP1B |
| SE_02_159400229 | chr5:74229037-74289671 |
60634 | 229 | 12 | 1796 | 51 | 5 | 40 | 0 | LINC01333,LINC01335 |
| SE_02_159400230 | chr2:130341601-130348534 |
6933 | 230 | 1 | 244 | 124 | 1 | 0 | 699 | CCDC115,IMP4,PTPN18 |
| SE_02_159400231 | chr6:27807270-27816503 |
9233 | 231 | 1 | 313 | 467 | 0 | 1 | 563 | HIST1H2AI,HIST1H3H,HIST1H2BM,HIST1H2BL,HIST1H2AJ,HIST1H2AL,HIST1H2AK,HIST1H2BN,HIST1H4K,HIST1H4J,LOC100131289 |
| SE_02_159400232 | chr5:111741990-111764682 |
22692 | 232 | 4 | 589 | 50 | 7 | 97 | 391 | NREP |
| SE_02_159400233 | chr3:114351187-114386470 |
35283 | 233 | 7 | 812 | 77 | 0 | 220 | 569 | ZBTB20,ZBTB20-AS1,MIR568 |
| SE_02_159400234 | chr12:45726175-45732715 |
6540 | 234 | 1 | 134 | 7 | 0 | 9 | 494 | ARID2,LINC00938 |
| SE_02_159400235 | chr1:211729086-211742982 |
13896 | 235 | 4 | 389 | 53 | 0 | 2 | 0 | NEK2 |
| SE_02_159400236 | chr8:101490897-101506026 |
15129 | 236 | 3 | 390 | 51 | 2 | 5 | 110 | GRHL2 |
| SE_02_159400237 | chr15:92808370-92846017 |
37647 | 237 | 4 | 1156 | 77 | 0 | 63 | 0 | LINC01578,ASB9P1 |
| SE_02_159400238 | chr10:100996150-101009570 |
13420 | 238 | 2 | 402 | 363 | 12 | 28 | 2174 | LZTS2,PDZD7,SEMA4G,SFXN3,MIR608,C10ORF2,MRPL43 |
| SE_02_159400239 | chr10:61898253-61912003 |
13750 | 239 | 4 | 322 | 25 | 0 | 53 | 186 | ARID5B |
| SE_02_159400240 | chr19:796357-811442 |
15085 | 240 | 5 | 741 | 85 | 0 | 95 | 1344 | MIR4745,PTBP1,CFD,LPPR3,ELANE,AZU1,PRTN3,MISP,MIR3187 |
| SE_02_159400241 | chr2:85418013-85446685 |
28672 | 241 | 6 | 802 | 921 | 0 | 103 | 1797 | SH2D6,CAPG |
| SE_02_159400242 | chr12:56670993-56689765 |
18772 | 242 | 5 | 610 | 289 | 1 | 34 | 352 | PTGES3,NACA,BAZ2A,ATP5B,SNORD59B,SNORD59A |
| SE_02_159400243 | chr10:72258854-72278709 |
19855 | 243 | 4 | 519 | 497 | 1 | 35 | 453 | DDIT4,ASCC1,ANAPC16 |
| SE_02_159400244 | chr2:201115707-201127054 |
11347 | 244 | 4 | 243 | 178 | 1 | 0 | 273 | CFLAR,CFLAR-AS1,FAM126B,NDUFB3 |
| SE_02_159400245 | chr2:222705648-222748027 |
42379 | 245 | 7 | 1165 | 138 | 2 | 97 | 56 | MOGAT1,FARSB |
| SE_02_159400246 | chr9:13830212-13873393 |
43181 | 246 | 7 | 1729 | 8 | 10 | 127 | 0 | LINC00583 |
| SE_02_159400247 | chr9:129481524-129500810 |
19286 | 247 | 4 | 532 | 50 | 0 | 40 | 390 | LINC00963 |
| SE_02_159400248 | chr5:124573558-124601265 |
27707 | 248 | 4 | 884 | 15 | 3 | 31 | 0 | LINC01170 |
| SE_02_159400249 | chr14:68790968-68796686 |
5718 | 249 | 1 | 262 | 21 | 3 | 21 | 472 | ZFP36L1 |
| SE_02_159400250 | chr11:57798954-57841203 |
42249 | 250 | 9 | 951 | 743 | 1 | 0 | 1091 | CTNND1,TMX2-CTNND1,BTBD18 |
| SE_02_159400251 | chr1:211257054-211261554 |
4500 | 251 | 1 | 119 | 47 | 0 | 0 | 302 | RCOR3 |
| SE_02_159400252 | chr17:73260714-73279304 |
18590 | 252 | 3 | 604 | 123 | 0 | 88 | 200 | CPSF4L,C17ORF80,CDC42EP4,FAM104A |
| SE_02_159400253 | chr1:17436968-17442226 |
5258 | 253 | 1 | 151 | 20 | 1 | 8 | 309 | RCC2 |
| SE_02_159400254 | chr5:122071888-122079283 |
7395 | 254 | 1 | 183 | 10 | 0 | 7 | 472 | LOX |
| SE_02_159400255 | chr9:14309678-14323766 |
14088 | 255 | 4 | 334 | 6 | 0 | 224 | 189 | NFIB |
| SE_02_159400256 | chr11:92528168-92552316 |
24148 | 256 | 5 | 703 | 18 | 1 | 236 | 0 | FAT3 |
| SE_02_159400257 | chr21:43015939-43033859 |
17920 | 257 | 3 | 588 | 519 | 5 | 13 | 757 | PKNOX1 |
| SE_02_159400258 | chr11:92387399-92422338 |
34939 | 258 | 5 | 922 | 36 | 2 | 132 | 0 | FAT3 |
| SE_02_159400259 | chr8:119640898-119666863 |
25965 | 259 | 8 | 682 | 329 | 1 | 39 | 0 | ENPP2 |
| SE_02_159400260 | chr11:78389923-78420429 |
30506 | 260 | 5 | 965 | 419 | 1 | 140 | 169 | GAB2,LOC101928865 |
| SE_02_159400261 | chr7:26198431-26204270 |
5839 | 261 | 2 | 288 | 18 | 0 | 9 | 383 | HNRNPA2B1,CBX3,NFE2L3 |
| SE_02_159400262 | chr10:61746899-61764255 |
17356 | 262 | 4 | 411 | 65 | 2 | 5 | 85 | C10ORF107 |
| SE_02_159400263 | chr6:142294979-142305095 |
10116 | 263 | 2 | 290 | 51 | 0 | 21 | 186 | ADGRG6 |
| SE_02_159400264 | chr16:87847622-87872107 |
24485 | 264 | 5 | 1103 | 161 | 0 | 25 | 336 | SLC7A5,MIR6775 |
| SE_02_159400265 | chr15:51366822-51375805 |
8983 | 265 | 2 | 272 | 126 | 1 | 3 | 0 | GLDN,CYP19A1,MIR7973-2 |
| SE_02_159400266 | chr15:42090619-42119248 |
28629 | 266 | 3 | 863 | 457 | 0 | 230 | 113 | PLA2G4D,PLA2G4F,PLA2G4E |
| SE_02_159400267 | chr6:147737865-147759497 |
21632 | 267 | 3 | 547 | 37 | 0 | 41 | 0 | SAMD5 |
| SE_02_159400268 | chr6:47072357-47093971 |
21614 | 268 | 4 | 646 | 29 | 1 | 22 | 0 | ADGRF1 |
| SE_02_159400269 | chr15:92899816-92918603 |
18787 | 269 | 4 | 536 | 48 | 0 | 105 | 285 | CHD2,MIR3175,LINC01578 |
| SE_02_159400270 | chr14:35384854-35406500 |
21646 | 270 | 5 | 698 | 389 | 2 | 24 | 586 | NFKBIA |
| SE_02_159400271 | chr6:26194570-26200655 |
6085 | 271 | 1 | 275 | 478 | 3 | 0 | 321 | HIST1H3D,HIST1H2BF,HIST1H2AD,HIST1H4G,HIST1H3E,HIST1H2BE,HIST1H4D,HIST1H2BG,HIST1H2AE,HIST1H2BD,HIST1H4E,HIST1H4F,HIST1H1E,HIST1H1D,HIST1H3F |
| SE_02_159400272 | chr11:78337728-78355386 |
17658 | 272 | 4 | 480 | 260 | 0 | 0 | 51 | GAB2 |
| SE_02_159400273 | chrX:41330631-41335520 |
4889 | 273 | 1 | 122 | 9 | 0 | 42 | 360 | DDX3X |
| SE_02_159400274 | chr10:13989892-14011327 |
21435 | 274 | 2 | 714 | 185 | 4 | 46 | 49 | FRMD4A,LOC101928453 |
| SE_02_159400275 | chr5:121364724-121382337 |
17613 | 275 | 2 | 636 | 12 | 1 | 24 | 0 | LOC102467226 |
| SE_02_159400276 | chr12:69051843-69070648 |
18805 | 276 | 2 | 537 | 6 | 0 | 85 | 0 | CPM |
| SE_02_159400277 | chr10:78657421-78666201 |
8780 | 277 | 2 | 222 | 3 | 0 | 25 | 0 | LINC00595 |
| SE_02_159400278 | chr1:159218245-159232450 |
14205 | 278 | 3 | 350 | 104 | 5 | 5 | 0 | ACKR1,CADM3,CADM3-AS1 |
| SE_02_159400279 | chr20:32450821-32476005 |
25184 | 279 | 4 | 781 | 213 | 0 | 36 | 782 | NOL4L,LOC101929698 |
| SE_02_159400280 | chr10:103799886-103817019 |
17133 | 280 | 5 | 470 | 148 | 0 | 12 | 64 | SH3PXD2A |
| SE_02_159400281 | chr8:76673065-76699426 |
26361 | 281 | 7 | 611 | 49 | 4 | 2 | 224 | ZFHX4-AS1,ZFHX4 |
| SE_02_159400282 | chr6:26154742-26173404 |
18662 | 282 | 2 | 610 | 315 | 7 | 15 | 351 | HIST1H2BD,HIST1H1E,HIST1H2AC,HIST1H2BE,HIST1H4D,HIST1H2BG,HIST1H2BF,HIST1H2AE,HIST1H1T,HIST1H4E,HIST1H2BC,HIST1H2AD |
| SE_02_159400283 | chr2:156332319-156343435 |
11116 | 283 | 2 | 201 | 16 | 1 | 46 | 508 | NR4A2 |
| SE_02_159400284 | chr20:53735263-53787247 |
51984 | 284 | 9 | 1529 | 57 | 7 | 93 | 0 | SUMO1P1,ZNF217 |
| SE_02_159400285 | chr6:15242762-15249452 |
6690 | 285 | 1 | 146 | 25 | 0 | 139 | 601 | JARID2,JARID2-AS1 |
| SE_02_159400286 | chr4:90126880-90144077 |
17197 | 286 | 4 | 400 | 19 | 0 | 18 | 152 | CCSER1 |
| SE_02_159400287 | chr7:105011792-105015976 |
4184 | 287 | 1 | 135 | 16 | 0 | 0 | 569 | KMT2E,KMT2E-AS1,LINC01004 |
| SE_02_159400288 | chr17:60721062-60749523 |
28461 | 288 | 3 | 706 | 31 | 0 | 130 | 37 | BCAS3 |
| SE_02_159400289 | chr19:47109307-47114263 |
4956 | 289 | 1 | 146 | 9 | 0 | 78 | 310 | ZC3H4,SAE1 |
| SE_02_159400290 | chr6:150750630-150777546 |
26916 | 290 | 4 | 724 | 49 | 4 | 40 | 41 | PLEKHG1,MTHFD1L |
| SE_02_159400291 | chr14:37587758-37607462 |
19704 | 291 | 4 | 445 | 121 | 9 | 47 | 696 | TTC6,FOXA1 |
| SE_02_159400292 | chr9:127955487-127981832 |
26345 | 292 | 4 | 718 | 419 | 0 | 33 | 236 | FAM102A,ST6GALNAC4,PIP5KL1,DPM2 |
| SE_02_159400293 | chr4:78524814-78553903 |
29089 | 293 | 5 | 874 | 538 | 1 | 40 | 774 | FRAS1,ANXA3 |
| SE_02_159400294 | chr1:155975573-155985233 |
9660 | 294 | 2 | 223 | 203 | 0 | 27 | 573 | ARHGEF2,RXFP4,SCARNA4,SSR2,MIR6738,KIAA0907 |
| SE_02_159400295 | chr10:28663770-28680549 |
16779 | 295 | 3 | 412 | 95 | 1 | 12 | 218 | BAMBI |
| SE_02_159400296 | chr6:51386045-51411596 |
25551 | 296 | 3 | 667 | 59 | 0 | 62 | 0 | LOC101927082,TFAP2B |
| SE_02_159400297 | chr7:89517388-89537091 |
19703 | 297 | 2 | 721 | 138 | 0 | 34 | 0 | DPY19L2P4 |
| SE_02_159400298 | chr1:103457100-103464391 |
7291 | 298 | 1 | 51 | 4 | 0 | 16 | 0 | LOC101928436 |
| SE_02_159400299 | chr11:57761257-57781941 |
20684 | 299 | 3 | 441 | 545 | 0 | 0 | 92 | CTNND1,TMX2-CTNND1,BTBD18,TMX2,C11ORF31,MED19 |
| SE_02_159400300 | chr10:89171680-89217605 |
45925 | 300 | 11 | 1268 | 233 | 2 | 18 | 403 | CH25H,LIPA |
| SE_02_159400301 | chr14:38928918-38952383 |
23465 | 301 | 6 | 643 | 465 | 2 | 14 | 31 | LINC00639 |
| SE_02_159400302 | chr1:156746311-156752661 |
6350 | 302 | 1 | 159 | 88 | 0 | 2 | 363 | HDGF,CRABP2,RRNAD1,ISG20L2,PRCC,MRPL24 |
| SE_02_159400303 | chr6:3574902-3586562 |
11660 | 303 | 3 | 318 | 18 | 1 | 4 | 0 | SLC22A23 |
| SE_02_159400304 | chr1:207747745-207756591 |
8846 | 304 | 2 | 209 | 59 | 0 | 11 | 151 | CD46,MIR29C,MIR29B2 |
| SE_02_159400305 | chr12:54191899-54202186 |
10287 | 305 | 3 | 299 | 87 | 1 | 96 | 0 | MIR3198-2,SMUG1 |
| SE_02_159400306 | chr17:81510587-81519768 |
9181 | 306 | 2 | 426 | 282 | 1 | 0 | 518 | ACTG1,FSCN2,FAAP100,NPLOC4 |
| SE_02_159400307 | chr17:8954362-8979216 |
24854 | 307 | 3 | 712 | 57 | 1 | 99 | 132 | PIK3R5,NTN1 |
| SE_02_159400308 | chr20:6418421-6426581 |
8160 | 308 | 2 | 215 | 0 | 2 | 37 | 0 | CASC20 |
| SE_02_159400309 | chr5:124399850-124413393 |
13543 | 309 | 4 | 344 | 52 | 5 | 11 | 0 | LINC01170 |
| SE_02_159400310 | chr13:105032551-105038318 |
5767 | 310 | 1 | 177 | 0 | 0 | 14 | 0 | DAOA |
| SE_02_159400311 | chr17:4944173-4951065 |
6892 | 311 | 2 | 225 | 208 | 0 | 14 | 751 | RNF167,PFN1,ENO3,CAMTA2,GP1BA,KIF1C,C17ORF107,MIR6865,SLC25A11,CHRNE,INCA1,MIR6864,SPAG7 |
| SE_02_159400312 | chr9:124657647-124661817 |
4170 | 312 | 1 | 115 | 4 | 0 | 2 | 250 | NR6A1,MIR181A2HG,MIR181A2,MIR181B2 |
| SE_02_159400313 | chr2:192685663-192699349 |
13686 | 313 | 3 | 348 | 0 | 3 | 97 | 0 | PCGEM1 |
| SE_02_159400314 | chr2:173962691-173966562 |
3871 | 314 | 1 | 116 | 16 | 0 | 19 | 569 | SP3 |
| SE_02_159400315 | chr5:82801936-82827354 |
25418 | 315 | 6 | 679 | 18 | 0 | 111 | 0 | LINC01338,MIR3977 |
| SE_02_159400316 | chr8:101106492-101111268 |
4776 | 316 | 1 | 117 | 6 | 2 | 7 | 0 | FLJ42969 |
| SE_02_159400317 | chr15:63042771-63054758 |
11987 | 317 | 3 | 318 | 157 | 4 | 98 | 841 | TPM1 |
| SE_02_159400318 | chr5:3738553-3755022 |
16469 | 318 | 2 | 582 | 51 | 2 | 28 | 0 | IRX1,LINC01019 |
| SE_02_159400319 | chr17:7884192-7890053 |
5861 | 319 | 1 | 115 | 60 | 0 | 0 | 412 | CHD3,CYB5D1,CNTROB,TMEM88,SCARNA21,LOC284023,KDM6B,TRAPPC1,NAA38,KCNAB3 |
| SE_02_159400320 | chr13:110907356-110917185 |
9829 | 320 | 3 | 314 | 158 | 0 | 16 | 240 | ANKRD10,LINC00346,LINC00431 |
| SE_02_159400321 | chr12:6528807-6537923 |
9116 | 321 | 3 | 339 | 392 | 0 | 15 | 1070 | GAPDH,NCAPD2,IFFO1,SCARNA11,MRPL51,NOP2,SCARNA10 |
| SE_02_159400322 | chr10:60862960-60881129 |
18169 | 322 | 5 | 553 | 29 | 3 | 55 | 387 | RHOBTB1 |
| SE_02_159400323 | chr2:69893488-69899982 |
6494 | 323 | 2 | 159 | 118 | 0 | 0 | 198 | SNRNP27,MXD1 |
| SE_02_159400324 | chr11:59141612-59149773 |
8161 | 324 | 1 | 204 | 109 | 0 | 1 | 521 | FAM111A,LOC101927204,FAM111B,DTX4 |
| SE_02_159400325 | chr10:79066784-79074951 |
8167 | 325 | 2 | 200 | 34 | 1 | 25 | 438 | ZMIZ1,ZMIZ1-AS1 |
| SE_02_159400326 | chr6:13383884-13400128 |
16244 | 326 | 2 | 468 | 84 | 0 | 11 | 0 | GFOD1 |
| SE_02_159400327 | chr6:42780775-42784511 |
3736 | 327 | 1 | 70 | 30 | 0 | 0 | 93 | TBCC,GLTSCR1L |
| SE_02_159400328 | chr1:178456019-178471153 |
15134 | 328 | 4 | 372 | 75 | 0 | 23 | 418 | RASAL2,TEX35 |
| SE_02_159400329 | chr6:26048551-26066887 |
18336 | 329 | 3 | 556 | 608 | 8 | 28 | 174 | HIST1H1C,HFE,HIST1H2AB,HIST1H3C,HIST1H1A,HIST1H3A,HIST1H1T,HIST1H4B,HIST1H2BB,HIST1H4C,HIST1H3B,HIST1H4A |
| SE_02_159400330 | chr21:43176830-43198256 |
21426 | 330 | 4 | 693 | 22 | 1 | 67 | 0 | LINC00322 |
| SE_02_159400331 | chr1:204493618-204507800 |
14182 | 331 | 3 | 406 | 94 | 2 | 50 | 246 | MDM4,PIK3C2B |
| SE_02_159400332 | chr14:76946502-76962881 |
16379 | 332 | 3 | 430 | 128 | 0 | 58 | 0 | IRF2BPL |
| SE_02_159400333 | chr5:372018-401395 |
29377 | 333 | 5 | 925 | 754 | 0 | 31 | 92 | AHRR,EXOC3-AS1,EXOC3 |
| SE_02_159400334 | chr7:116706514-116735969 |
29455 | 334 | 6 | 672 | 38 | 3 | 44 | 205 | MET |
| SE_02_159400335 | chr2:62456869-62503392 |
46523 | 335 | 7 | 1297 | 341 | 4 | 20 | 249 | TMEM17 |
| SE_02_159400336 | chr1:99569750-99591557 |
21807 | 336 | 6 | 649 | 26 | 3 | 22 | 0 | MIR548N,PALMD |
| SE_02_159400337 | chr1:9537203-9571867 |
34664 | 337 | 5 | 871 | 105 | 7 | 7 | 321 | SLC25A33,TMEM201 |
| SE_02_159400338 | chr5:6046085-6072327 |
26242 | 338 | 5 | 697 | 27 | 2 | 42 | 0 | FLJ33360,MED10 |
| SE_02_159400339 | chr2:2865689-2879568 |
13879 | 339 | 3 | 520 | 25 | 2 | 12 | 0 | LINC01250 |
| SE_02_159400340 | chr4:165870709-165881504 |
10795 | 340 | 4 | 269 | 6 | 0 | 0 | 248 | TLL1 |
| SE_02_159400341 | chr22:29266585-29270053 |
3468 | 341 | 1 | 130 | 27 | 0 | 0 | 301 | RHBDD3,EWSR1,RASL10A,GAS2L1 |
| SE_02_159400342 | chr3:21421970-21438428 |
16458 | 342 | 4 | 437 | 1 | 1 | 0 | 154 | ZNF385D,VENTXP7 |
| SE_02_159400343 | chr1:202083569-202087760 |
4191 | 343 | 1 | 116 | 7 | 1 | 0 | 0 | GPR37L1 |
| SE_02_159400344 | chr2:192294048-192314540 |
20492 | 344 | 3 | 491 | 103 | 0 | 36 | 0 | TMEFF2 |
| SE_02_159400345 | chr1:205961029-205977484 |
16455 | 345 | 5 | 0 | 118 | 0 | 0 | 0 | RAB7B,LOC103021296,LOC103021295,CTSE,SLC26A9 |
| SE_02_159400346 | chr6:151388183-151392510 |
4327 | 346 | 1 | 126 | 36 | 0 | 13 | 130 | ZBTB2 |
| SE_02_159400347 | chr7:55074708-55093096 |
18388 | 347 | 4 | 504 | 65 | 4 | 28 | 0 | EGFR |
| SE_02_159400348 | chr5:139689480-139706149 |
16669 | 348 | 3 | 404 | 107 | 3 | 71 | 0 | CXXC5,LOC101929696 |
| SE_02_159400349 | chr1:182084681-182103478 |
18797 | 349 | 4 | 532 | 73 | 6 | 56 | 0 | ZNF648 |
| SE_02_159400350 | chr8:127006095-127018603 |
12508 | 350 | 2 | 388 | 6 | 4 | 15 | 125 | PCAT1 |
| SE_02_159400351 | chr17:44217663-44222016 |
4353 | 351 | 1 | 85 | 28 | 0 | 0 | 613 | UBTF,ASB16,TMUB2,SLC4A1,ATXN7L3,ASB16-AS1,MIR6782 |
| SE_02_159400352 | chr4:110615907-110623692 |
7785 | 352 | 1 | 199 | 10 | 1 | 7 | 696 | PITX2 |
| SE_02_159400353 | chr6:147557424-147562863 |
5439 | 353 | 1 | 137 | 8 | 0 | 9 | 0 | SAMD5 |
| SE_02_159400354 | chr3:136750034-136753984 |
3950 | 354 | 1 | 102 | 101 | 0 | 5 | 159 | STAG1 |
| SE_02_159400355 | chr7:99942519-99954701 |
12182 | 355 | 3 | 298 | 980 | 0 | 0 | 0 | TRIM4,GJC3,AZGP1P1,AZGP1 |
| SE_02_159400356 | chr2:113280483-113290063 |
9580 | 356 | 3 | 259 | 471 | 0 | 21 | 0 | PAX8-AS1,PAX8 |
| SE_02_159400357 | chr3:155155902-155164886 |
8984 | 357 | 4 | 217 | 11 | 0 | 4 | 21 | MME |
| SE_02_159400358 | chr12:53972982-53979389 |
6407 | 358 | 1 | 148 | 48 | 0 | 0 | 599 | HOXC11,HOTAIR,HOXC12,HOXC4,HOXC-AS2,HOXC13,HOXC9,HOXC6,HOXC8,HOXC-AS1,MIR196A2,HOXC13-AS,HOXC10,HOXC-AS3 |
| SE_02_159400359 | chr15:60370711-60394620 |
23909 | 359 | 7 | 725 | 202 | 4 | 111 | 125 | ANXA2 |
| SE_02_159400360 | chr3:114399571-114419832 |
20261 | 360 | 4 | 496 | 22 | 1 | 184 | 0 | ZBTB20,LOC101929754,ZBTB20-AS1 |
| SE_02_159400361 | chr12:57237519-57244109 |
6590 | 361 | 1 | 155 | 50 | 1 | 0 | 252 | NDUFA4L2,STAC3,SHMT2,MIR1228,NXPH4 |
| SE_02_159400362 | chr12:14239708-14267794 |
28086 | 362 | 6 | 785 | 60 | 4 | 8 | 0 | ATF7IP |
| SE_02_159400363 | chr21:37365331-37381096 |
15765 | 363 | 2 | 498 | 106 | 2 | 31 | 149 | DYRK1A |
| SE_02_159400364 | chr2:189897234-189913043 |
15809 | 364 | 4 | 358 | 129 | 1 | 86 | 0 | ORMDL1 |
| SE_02_159400365 | chr5:170099774-170119785 |
20011 | 365 | 4 | 612 | 85 | 9 | 80 | 589 | FOXI1 |
| SE_02_159400366 | chr12:62781385-62801033 |
19648 | 366 | 8 | 528 | 20 | 2 | 105 | 35 | PPM1H |
| SE_02_159400367 | chr17:57404909-57418520 |
13611 | 367 | 2 | 354 | 22 | 1 | 71 | 0 | MSI2,LOC101927557 |
| SE_02_159400368 | chr4:113756722-113763629 |
6907 | 368 | 3 | 181 | 10 | 1 | 1 | 337 | CAMK2D |
| SE_02_159400369 | chr7:3742166-3767172 |
25006 | 369 | 4 | 1050 | 18 | 0 | 57 | 0 | SDK1 |
| SE_02_159400370 | chr10:123019612-123029509 |
9897 | 370 | 4 | 234 | 88 | 0 | 80 | 0 | ACADSB,IKZF5,PSTK |
| SE_02_159400371 | chr5:4242444-4250640 |
8196 | 371 | 2 | 287 | 7 | 0 | 33 | 0 | LOC101929153 |
| SE_02_159400372 | chr7:36389140-36409950 |
20810 | 372 | 4 | 547 | 179 | 3 | 32 | 342 | ANLN,KIAA0895 |
| SE_02_159400373 | chr1:77436172-77451176 |
15004 | 373 | 3 | 338 | 74 | 1 | 2 | 0 | AK5 |
| SE_02_159400374 | chr11:111422443-111444097 |
21654 | 374 | 5 | 644 | 525 | 2 | 43 | 74 | POU2AF1,LOC100132078 |
| SE_02_159400375 | chr10:13346267-13350511 |
4244 | 375 | 1 | 103 | 25 | 1 | 0 | 200 | SEPHS1,PHYH |
| SE_02_159400376 | chr11:62879721-62884814 |
5093 | 376 | 1 | 146 | 38 | 1 | 0 | 463 | SLC3A2,SNORD29,SNHG1,RNU2-2P,SNORD27,SNORD30,SNORD26,SNORD31,WDR74,CHRM1,SNORD22,SNORD28,STX5,SNORD25 |
| SE_02_159400377 | chr13:22878626-22884893 |
6267 | 377 | 1 | 213 | 99 | 0 | 0 | 0 | BASP1P1 |
| SE_02_159400378 | chr7:27129835-27137137 |
7302 | 378 | 1 | 177 | 120 | 3 | 145 | 282 | HOXA4,HOXA10,HOXA11,HOXA-AS3,HOXA10-AS,MIR196B,HOXA5,HOXA-AS2,HOXA7,HOXA1,HOXA2,HOXA3,HOXA9,HOTAIRM1,HOXA6,HOXA10-HOXA9,HOXA11-AS |
| SE_02_159400379 | chr5:179621524-179635202 |
13678 | 379 | 2 | 426 | 264 | 2 | 8 | 434 | HNRNPH1,LOC101928445,C5ORF60,CBY3 |
| SE_02_159400380 | chr22:41443932-41448476 |
4544 | 380 | 1 | 103 | 311 | 0 | 2 | 269 | TOB2,ACO2,PHF5A |
| SE_02_159400381 | chr17:17680949-17695369 |
14420 | 381 | 3 | 373 | 146 | 0 | 122 | 193 | RAI1,SMCR2 |
| SE_02_159400382 | chr6:14814305-14826007 |
11702 | 382 | 2 | 299 | 1 | 0 | 49 | 0 | JARID2 |
| SE_02_159400383 | chr15:74781495-74791797 |
10302 | 383 | 3 | 236 | 421 | 1 | 2 | 379 | CSK,MIR4513,CPLX3,MIR6882,LMAN1L,CYP1A2 |
| SE_02_159400384 | chr12:6961387-6965880 |
4493 | 384 | 1 | 169 | 55 | 1 | 53 | 355 | MIR200C,PHB2,MIR141,PTPN6,ENO2,SCARNA12,RNU7-1,C12ORF57,ATN1,EMG1 |
| SE_02_159400385 | chr2:11743763-11753793 |
10030 | 385 | 3 | 278 | 43 | 2 | 29 | 143 | LPIN1,MIR548S |
| SE_02_159400386 | chr12:104285633-104295702 |
10069 | 386 | 3 | 258 | 72 | 0 | 7 | 261 | TXNRD1,EID3 |
| SE_02_159400387 | chr6:111481702-111485613 |
3911 | 387 | 1 | 84 | 27 | 1 | 0 | 451 | REV3L,TRAF3IP2-AS1 |
| SE_02_159400388 | chr6:144744812-144783559 |
38747 | 388 | 8 | 984 | 74 | 2 | 106 | 259 | UTRN |
| SE_02_159400389 | chr11:34044736-34054393 |
9657 | 389 | 2 | 303 | 99 | 1 | 5 | 425 | CAPRIN1 |
| SE_02_159400390 | chr4:37461516-37483331 |
21815 | 390 | 7 | 580 | 186 | 1 | 43 | 14 | C4ORF19 |
| SE_02_159400391 | chr4:105544416-105570754 |
26338 | 391 | 4 | 727 | 284 | 5 | 58 | 204 | ARHGEF38-IT1,ARHGEF38 |
| SE_02_159400392 | chr17:75782847-75787007 |
4160 | 392 | 1 | 115 | 62 | 0 | 4 | 166 | UNK,MIR4738,GALK1,H3F3B |
| SE_02_159400393 | chr9:21986883-21996494 |
9611 | 393 | 3 | 209 | 22 | 2 | 22 | 293 | CDKN2B-AS1,CDKN2A,CDKN2B,CDKN2A-AS1 |
| SE_02_159400394 | chr5:179817938-179822752 |
4814 | 394 | 1 | 134 | 60 | 0 | 2 | 250 | SQSTM1,LTC4S,MGAT4B,C5ORF45,MIR1229 |
| SE_02_159400395 | chr22:37559815-37565027 |
5212 | 395 | 1 | 138 | 60 | 0 | 2 | 168 | CDC42EP1,GGA1,LGALS2,CARD10 |
| SE_02_159400396 | chr7:5555231-5570598 |
15367 | 396 | 4 | 559 | 66 | 0 | 105 | 0 | FSCN1,FBXL18,LOC221946,ACTB |
| SE_02_159400397 | chr10:121301122-121313964 |
12842 | 397 | 3 | 314 | 2 | 1 | 34 | 0 | FGFR2 |
| SE_02_159400398 | chr2:192369494-192383535 |
14041 | 398 | 2 | 364 | 2 | 0 | 45 | 0 | TMEFF2 |
| SE_02_159400399 | chr17:57660620-57686023 |
25403 | 399 | 4 | 666 | 52 | 5 | 74 | 255 | MSI2,LOC101927539 |
| SE_02_159400400 | chr3:9393260-9399876 |
6616 | 400 | 2 | 224 | 87 | 0 | 15 | 643 | SETD5,THUMPD3-AS1,THUMPD3 |
SE annotation visualization
Information description of sample and annotation
| Case ID: | Name:GSM7937508 |
| Input ID: | Name:GSM7937509 |
| Common SNP: | dbSNP |
| eQTL: | GTEx, HaploReg v4.1, PancanQTL |
| Risk SNP : | GWAS Catalog, GWASdb v2.0 |
| TFBS: | TFBS Conserved of UCSC |
| CRISPR/Cas9 target site: | CRISPR Targets of UCSC |
Software and parameters used
| Read Mapping: | bowtie(v2.4.4) -p 10 -x -S -U |
| Peak Calling: | macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto |
| Stitching Distance: | 12.5 kb |
| TSS Exclusive Zone: | +/- 2 kb |