T(co)F Overview
T(co)F: Kdm5b
Species: Mus musculus
Knock-Method: siRNA
T(co)F Class: ARID domain factors
T(co)F Superclass: Helix-turn-helix domains
Biosample Name: ES cells
Tissue Type: Embryo
Biosample Type: Cell line
# of Control: 2
# of Treat: 2
Data Source: GEO
Profile ID: GSE63285
Platform: GPL17021
Pubmed ID: -

Kdm5b- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of Kdm5b
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of Kdm5b
Upstream Pathway Annotation of Kdm5b
T(co)F Pathway Name Source Gene Number
Kdm5b GENERIC_TRANSCRIPTION_PATHWAY REACTOME 842
Kdm5b HDMS_DEMETHYLATE_HISTONES REACTOME 47
Kdm5b CHROMATIN_MODIFYING_ENZYMES REACTOME 205
Kdm5b GENE_EXPRESSION_TRANSCRIPTION REACTOME 1061
Kdm5b TRANSCRIPTIONAL_REGULATION_BY_THE_AP_2_TFAP2_FAMIL REACTOME 22
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of Kdm5b
T(co)F Expression in Mouse Cell (Fantom5) T(co)F Expression in Mouse Tissue (Fantom5)