T(co)F Overview
T(co)F: Cited2
Species: Mus musculus
Knock-Method: knockout
T(co)F Class: Others
T(co)F Superclass: TcoF-DB_TcoF
Biosample Name: Hematopoietic stem cell (HSC)
Tissue Type: Haematopoietic_and_lymphoid_tissue
Biosample Type: Stem cell
# of Control: 5
# of Treat: 5
Data Source: GEO
Profile ID: GSE175372
Platform: GPL19057
Pubmed ID: 34715054

Cited2- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of Cited2
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of Cited2
Upstream Pathway Annotation of Cited2
T(co)F Pathway Name Source Gene Number
Cited2 REGULATION_OF_GENE_EXPRESSION_BY_HYPOXIA_INDUCIBLE REACTOME 6
Cited2 CELLULAR_RESPONSE_TO_HYPOXIA REACTOME 70
Cited2 GENERIC_TRANSCRIPTION_PATHWAY REACTOME 842
Cited2 GENE_EXPRESSION_TRANSCRIPTION REACTOME 1061
Cited2 TRANSCRIPTIONAL_REGULATION_BY_THE_AP_2_TFAP2_FAMIL REACTOME 22
Cited2 ACTIVATION_OF_THE_TFAP2_AP_2_FAMILY_OF_TRANSCRIPTI REACTOME 11
Cited2 CELLULAR_RESPONSES_TO_STIMULI REACTOME 454
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of Cited2
T(co)F Expression in Mouse Cell (Fantom5) T(co)F Expression in Mouse Tissue (Fantom5)