T(co)F Overview
T(co)F: Ssrp1
Species: Mus musculus
Knock-Method: CRISPR
T(co)F Class: High-mobility group (HMG) domain factors
T(co)F Superclass: Other all-alpha-helical DNA-binding domains
Biosample Name: ES cells
Tissue Type: Embryo
Biosample Type: Cell line
# of Control: 4
# of Treat: 4
Data Source: GEO
Profile ID: GSE141788
Platform: GPL21273
Pubmed ID: 32894293

Ssrp1- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of Ssrp1
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of Ssrp1
Upstream Pathway Annotation of Ssrp1
T(co)F Pathway Name Source Gene Number
Ssrp1 FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX REACTOME 55
Ssrp1 GENERIC_TRANSCRIPTION_PATHWAY REACTOME 842
Ssrp1 TRANSCRIPTIONAL_REGULATION_BY_TP53 REACTOME 301
Ssrp1 REGULATION_OF_TP53_ACTIVITY REACTOME 155
Ssrp1 RNA_POLYMERASE_II_PRE_TRANSCRIPTION_EVENTS REACTOME 78
Ssrp1 TP53_REGULATES_TRANSCRIPTION_OF_DNA_REPAIR_GENES REACTOME 43
Ssrp1 REGULATION_OF_TP53_ACTIVITY_THROUGH_PHOSPHORYLATIO REACTOME 91
Ssrp1 GENE_EXPRESSION_TRANSCRIPTION REACTOME 1061
Ssrp1 MECHANISMS_ASSOCIATED_WITH_PLURIPOTENCY WP 290
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of Ssrp1
T(co)F Expression in Mouse Cell (Fantom5) T(co)F Expression in Mouse Tissue (Fantom5)