T(co)F Overview
T(co)F: Kdm2a
Species: Mus musculus
Knock-Method: CRISPR
T(co)F Class: CXXC zinc finger factors
T(co)F Superclass: Zinc-coordinating DNA-binding domains
Biosample Name: ES cells
Tissue Type: Embryo
Biosample Type: Cell line
# of Control: 2
# of Treat: 2
Data Source: GEO
Profile ID: GSE117148
Platform: GPL23479
Pubmed ID: 31172793

Kdm2a- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of Kdm2a
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of Kdm2a
Upstream Pathway Annotation of Kdm2a
T(co)F Pathway Name Source Gene Number
Kdm2a HDMS_DEMETHYLATE_HISTONES REACTOME 47
Kdm2a CHROMATIN_MODIFYING_ENZYMES REACTOME 205
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of Kdm2a
T(co)F Expression in Mouse Cell (Fantom5) T(co)F Expression in Mouse Tissue (Fantom5)