T(co)F Overview
T(co)F: Rest
Species: Mus musculus
Knock-Method: shRNA
T(co)F Class: C2H2 zinc finger factors
T(co)F Superclass: Zinc-coordinating DNA-binding domains
Biosample Name: NSP
Tissue Type: Brain
Biosample Type: Cell line
# of Control: 3
# of Treat: 3
Data Source: GEO
Profile ID: GSE38538
Platform: GPL1261
Pubmed ID: 22791895

Rest- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of Rest
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of Rest
Upstream Pathway Annotation of Rest
T(co)F Pathway Name Source Gene Number
Rest HDACS_DEACETYLATE_HISTONES REACTOME 22
Rest CHROMATIN_MODIFYING_ENZYMES REACTOME 205
Rest SIDS_SUSCEPTIBILITY_PATHWAYS WP 59
Rest MECP2_AND_ASSOCIATED_RETT_SYNDROME WP 45
Rest MECHANISMS_ASSOCIATED_WITH_PLURIPOTENCY WP 290
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of Rest
T(co)F Expression in Mouse Cell (Fantom5) T(co)F Expression in Mouse Tissue (Fantom5)