T(co)F Overview
T(co)F: Arid1a
Species: Mus musculus
Knock-Method: knockout
T(co)F Class: ARID domain factors
T(co)F Superclass: Helix-turn-helix domains
Biosample Name: Liver
Tissue Type: Liver
Biosample Type: Tissue
# of Control: 3
# of Treat: 5
Data Source: GEO
Profile ID: GSE58964
Platform: GPL7202
Pubmed ID: -

Arid1a- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of Arid1a
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of Arid1a
Upstream Pathway Annotation of Arid1a
T(co)F Pathway Name Source Gene Number
Arid1a VDR_PATHWAY BIOCARTA 22
Arid1a HSWI_SNF_PATHWAY BIOCARTA 11
Arid1a GENERIC_TRANSCRIPTION_PATHWAY REACTOME 842
Arid1a RMTS_METHYLATE_HISTONE_ARGININES REACTOME 71
Arid1a CHROMATIN_MODIFYING_ENZYMES REACTOME 205
Arid1a GENE_EXPRESSION_TRANSCRIPTION REACTOME 1061
Arid1a TRANSCRIPTIONAL_REGULATION_BY_RUNX1 REACTOME 198
Arid1a RUNX1_INTERACTS_WITH_CO_FACTORS_WHOSE_PRECISE_EFFE REACTOME 35
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of Arid1a
T(co)F Expression in Mouse Cell (Fantom5) T(co)F Expression in Mouse Tissue (Fantom5)