T(co)F Overview
T(co)F: ARID1A
Species: Homo sapiens
Knock-Method: siRNA
T(co)F Class: ARID domain factors
T(co)F Superclass: Helix-turn-helix domains
Biosample Name: MDA-MB-157
Tissue Type: Mammary_gland
Biosample Type: Cell line
# of Control: 1
# of Treat: 1
Data Source: GEO
Profile ID: GSE72669
Platform: GPL16699
Pubmed ID: 28123592

ARID1A- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of ARID1A
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of ARID1A
Upstream Pathway Annotation of ARID1A
T(co)F Pathway Name Source Gene Number
ARID1A RMTs methylate histone arginines Reactome 75
ARID1A Wnt signaling pathway PANTHER 250
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of ARID1A
T(co)F Expression in Human Normal Tissues (GTEx) T(co)F Expression in Cancer Cell Lines (CCLE)
T(co)F Expression in Human Cancers (TCGA) T(co)F Expression in Encode Cell Lines