T(co)F Overview
T(co)F: ARNT
Species: Homo sapiens
Knock-Method: shRNA
T(co)F Class: Basic helix-loop-helix factors (bHLH)
T(co)F Superclass: Basic domains
Biosample Name: hESC HSF1
Tissue Type: Embryo
Biosample Type: Stem cell
# of Control: 2
# of Treat: 2
Data Source: GEO
Profile ID: GSE61842
Platform: GPL570
Pubmed ID: 25418722

ARNT- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of ARNT
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of ARNT
Upstream Pathway Annotation of ARNT
T(co)F Pathway Name Source Gene Number
ARNT Regulation of gene expression by Hypoxia-inducible Factor Reactome 10
ARNT Hypoxia response via HIF activation PANTHER 16
ARNT Hypoxic and oxygen homeostasis regulation of HIF-1-alpha PID 19
ARNT HIF-2-alpha transcription factor network PID 34
ARNT Notch-mediated HES/HEY network PID 48
ARNT Renal cell carcinoma KEGG 65
ARNT HIF-1-alpha transcription factor network PID 67
ARNT AndrogenReceptor NetPath 167
ARNT Pathways in cancer KEGG 321
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of ARNT
T(co)F Expression in Human Normal Tissues (GTEx) T(co)F Expression in Cancer Cell Lines (CCLE)
T(co)F Expression in Human Cancers (TCGA) T(co)F Expression in Encode Cell Lines