| SE element chr | SE element start | SE element start | TF | TF biosample name | TF end | TF start |
|---|---|---|---|---|---|---|
| chr9 | 95003886 | 95004722 | AFF1 | K-562 | 95003978 | 95004331 |
| chr9 | 95003886 | 95004722 | AFF4 | HeLa | 95004161 | 95004323 |
| chr9 | 95003886 | 95004722 | AFF4 | MCF-7,HeLa | 95004265 | 95004613 |
| chr9 | 95004954 | 95008476 | AFF4 | HeLa | 95005087 | 95005313 |
| chr9 | 95004954 | 95008476 | AFF4 | MCF-7,HeLa | 95005403 | 95005709 |
| chr9 | 95004954 | 95008476 | AFF4 | HeLa | 95006330 | 95006600 |
| chr9 | 95003886 | 95004722 | AHR | MCF-7 | 95004413 | 95004591 |
| chr9 | 94992057 | 94993160 | APC | HCT-116 | 94992276 | 94992623 |
| chr9 | 95003886 | 95004722 | APC | HCT-116 | 95004185 | 95004662 |
| chr9 | 94992057 | 94993160 | AR | MCF-7 | 94992580 | 94992755 |
| chr9 | 95003886 | 95004722 | AR | MCF-7 | 95004014 | 95004274 |
| chr9 | 95003886 | 95004722 | AR | LNCaP-clone-FGC,MCF-7,prostate,myofibroblast | 95004255 | 95004614 |
| chr9 | 95004954 | 95008476 | AR | LNCaP | 95005230 | 95005366 |
| chr9 | 95004954 | 95008476 | AR | LNCaP-clone-FGC,prostate,LNCaP,MCF-7 | 95005360 | 95005573 |
| chr9 | 95004954 | 95008476 | AR | LNCaP | 95006329 | 95006492 |
| chr9 | 95003886 | 95004722 | ARID1A | RMG-I,endometrial-epithelial-cells,12Z,MCF-7,Hep-G2 | 95004118 | 95004687 |
| chr9 | 95004954 | 95008476 | ARID1A | RMG-I,endometrial-epithelial-cells,Hep-G2,MCF-7 | 95005256 | 95005629 |
| chr9 | 95004954 | 95008476 | ARID1A | endometrial-epithelial-cells,12Z | 95005976 | 95006687 |
| chr9 | 95004954 | 95008476 | ARID1A | 12Z | 95006789 | 95006925 |
| chr9 | 95004954 | 95008476 | ARID1B | Hep-G2 | 95007590 | 95008032 |
| chr9 | 94991008 | 94991685 | ARID3A | Hep-G2 | 94991279 | 94991418 |
| chr9 | 95004954 | 95008476 | ARID3A | GM12878 | 95005108 | 95005651 |
| chr9 | 95004954 | 95008476 | ARID3A | Hep-G2 | 95006381 | 95006538 |
| chr9 | 95004954 | 95008476 | ARID3A | Hep-G2 | 95008108 | 95008441 |
| chr9 | 95004954 | 95008476 | ARID4A | Hep-G2 | 95005047 | 95005255 |
| chr9 | 95004954 | 95008476 | ARID4A | Hep-G2 | 95005388 | 95005637 |
| chr9 | 95004954 | 95008476 | ARID4A | Hep-G2 | 95006445 | 95006609 |
| chr9 | 95003886 | 95004722 | ARID4B | PC-3 | 95004210 | 95004641 |
| chr9 | 94992057 | 94993160 | ARNT | MCF-7 | 94992083 | 94992486 |
| chr9 | 95003886 | 95004722 | ARNT | K-562 | 95003940 | 95004213 |
| chr9 | 95004954 | 95008476 | ARNT | MCF-7 | 95005145 | 95005479 |
| chr9 | 95003886 | 95004722 | ARNTL | Hep-G2 | 95004323 | 95004643 |
| chr9 | 95004954 | 95008476 | ARNTL | Hep-G2 | 95008247 | 95008437 |
| chr9 | 95004954 | 95008476 | ASCL1 | NCI-H82 | 95007162 | 95007339 |
| chr9 | 95003886 | 95004722 | ASH2L | WA01,GM12878,Hep-G2 | 95004047 | 95004666 |
| chr9 | 95004954 | 95008476 | ASH2L | WA01,GM12878 | 95005230 | 95005668 |
| chr9 | 95003886 | 95004722 | ATF1 | K-562 | 95003924 | 95004565 |
| chr9 | 95004954 | 95008476 | ATF1 | HCT-116 | 95005228 | 95005533 |
| chr9 | 95004954 | 95008476 | ATF2 | Hep-G2 | 95008187 | 95008398 |
| chr9 | 94992057 | 94993160 | ATF3 | Hep-G2 | 94992193 | 94992406 |
| chr9 | 95003886 | 95004722 | ATF3 | A-549 | 95004264 | 95004571 |
| chr9 | 95003886 | 95004722 | ATF3 | Hep-G2 | 95004386 | 95004695 |
| chr9 | 95004954 | 95008476 | ATF3 | Hep-G2,K-562 | 95005086 | 95005236 |
| chr9 | 95004954 | 95008476 | ATF3 | A-549,Hep-G2 | 95005332 | 95005550 |
| chr9 | 95004954 | 95008476 | ATF3 | liver | 95006298 | 95006647 |
| chr9 | 95004954 | 95008476 | ATF3 | liver | 95007639 | 95007855 |
| chr9 | 95004954 | 95008476 | ATF7 | K-562 | 95005306 | 95005598 |
| chr9 | 95004954 | 95008476 | ATF7 | Hep-G2 | 95008144 | 95008397 |
| chr9 | 95003886 | 95004722 | ATRX | metastatic-neuroblastoma | 95004159 | 95004562 |
| chr9 | 95004954 | 95008476 | ATRX | metastatic-neuroblastoma | 95005023 | 95005470 |
| chr9 | 95004954 | 95008476 | ATRX | metastatic-neuroblastoma | 95006241 | 95006658 |
| chr9 | 95004954 | 95008476 | ATRX | metastatic-neuroblastoma | 95008144 | 95008394 |
| chr9 | 95004954 | 95008476 | BACH1 | GM12878 | 95005109 | 95005632 |
| chr9 | 95003886 | 95004722 | BCL11A | CD34,HUDEP-2 | 95004122 | 95004202 |
| chr9 | 95004954 | 95008476 | BCL11A | GM12878 | 95005020 | 95005388 |
| chr9 | 95004954 | 95008476 | BCL11A | HUDEP-2 | 95007732 | 95007850 |
| chr9 | 94991008 | 94991685 | BCL3 | A-549 | 94991257 | 94991530 |
| chr9 | 95003886 | 95004722 | BCL3 | A-549 | 95004100 | 95004649 |
| chr9 | 95004954 | 95008476 | BCL3 | A-549 | 95005499 | 95005698 |
| chr9 | 95004954 | 95008476 | BCL3 | A-549 | 95005862 | 95006086 |
| chr9 | 95004954 | 95008476 | BCL3 | A-549 | 95006256 | 95006804 |
| chr9 | 95003886 | 95004722 | BCL6 | CD4,OCI-Ly1 | 95004035 | 95004596 |
| chr9 | 95004954 | 95008476 | BCL6 | OCI-Ly7,OCI-Ly1 | 95005150 | 95005543 |
| chr9 | 95004954 | 95008476 | BCOR | WA01 | 95005106 | 95005291 |
| chr9 | 95003886 | 95004722 | BRCA1 | SH-EP | 95004555 | 95004687 |
| chr9 | 95004954 | 95008476 | BRCA1 | SH-EP | 95005037 | 95005250 |
| chr9 | 95004954 | 95008476 | BRCA1 | HeLa-S3 | 95007693 | 95007814 |
| chr9 | 95003886 | 95004722 | BRD1 | HUES-64 | 95004119 | 95004352 |
| chr9 | 95003886 | 95004722 | BRD1 | RKO | 95004328 | 95004676 |
| chr9 | 95004954 | 95008476 | BRD1 | RKO | 95005015 | 95005559 |
| chr9 | 95004954 | 95008476 | BRD1 | HUES-64 | 95008258 | 95008459 |
| chr9 | 95004954 | 95008476 | BRD7 | SUM159PT | 95005073 | 95005355 |
| chr9 | 95004954 | 95008476 | CASZ1 | rhabdomyosarcoma | 95008165 | 95008396 |
| chr9 | 95003886 | 95004722 | CBFB | ME-1,Hep-G2 | 95004346 | 95004664 |
| chr9 | 95004954 | 95008476 | CBFB | Hep-G2 | 95005088 | 95005663 |
| chr9 | 95004954 | 95008476 | CBX4 | hMSC | 95004977 | 95005429 |
| chr9 | 95003886 | 95004722 | CDX2 | adult-duodenal-cell | 95004181 | 95004585 |
| chr9 | 94991008 | 94991685 | CEBPA | Kasumi-1,Hep-G2,liver,T-47D | 94991233 | 94991493 |
| chr9 | 94991008 | 94991685 | CEBPB | MCF-7,K-562,A-549,Hep-G2 | 94991214 | 94991476 |
| chr9 | 95004954 | 95008476 | CEBPB | A-549 | 95006421 | 95006565 |
| chr9 | 95004954 | 95008476 | CEBPB | Hep-G2 | 95008197 | 95008394 |
| chr9 | 94991008 | 94991685 | CEBPD | Hep-G2 | 94991237 | 94991468 |
| chr9 | 94992057 | 94993160 | CEBPD | Hep-G2 | 94992091 | 94992417 |
| chr9 | 95004954 | 95008476 | CEBPD | Hep-G2 | 95004989 | 95005155 |
| chr9 | 95004954 | 95008476 | CEBPD | Hep-G2 | 95008185 | 95008463 |
| chr9 | 95003886 | 95004722 | CHD1 | K-562,A-549,WA01,IMR-90,MCF-7,HeLa-S3 | 95004231 | 95004588 |
| chr9 | 95004954 | 95008476 | CHD1 | K-562,hMSC-TERT,WA01,MCF-7,IMR-90,HeLa-S3 | 95005074 | 95005544 |
| chr9 | 95004954 | 95008476 | CHD1 | IMR-90 | 95005962 | 95006100 |
| chr9 | 95004954 | 95008476 | CHD1 | MCF-7,IMR-90,hMSC-TERT,HeLa-S3 | 95006111 | 95006681 |
| chr9 | 95004954 | 95008476 | CHD1 | hMSC-TERT | 95007357 | 95007561 |
| chr9 | 95004954 | 95008476 | CHD1 | hMSC-TERT | 95008167 | 95008457 |
| chr9 | 95003886 | 95004722 | CHD2 | HeLa-S3 | 95004453 | 95004674 |
| chr9 | 95003886 | 95004722 | CHD2 | SK-N-SH | 95004538 | 95004677 |
| chr9 | 95004954 | 95008476 | CHD2 | HeLa-S3,SK-N-SH | 95006373 | 95006606 |
| chr9 | 95004954 | 95008476 | CHD2 | HeLa-S3 | 95007575 | 95007816 |
| chr9 | 95003886 | 95004722 | CHD4 | SCMC | 95004035 | 95004252 |
| chr9 | 95004954 | 95008476 | CHD4 | HaCaT | 95005662 | 95005816 |
| chr9 | 95004954 | 95008476 | CHD7 | hiPSC | 95006289 | 95006470 |
| chr9 | 95004954 | 95008476 | CHD7 | hiPSC | 95008136 | 95008454 |
| chr9 | 95003886 | 95004722 | CLOCK | MCF-7 | 95004257 | 95004624 |
| chr9 | 95003886 | 95004722 | CREB1 | GM12878,A-549,LNCaP | 95004129 | 95004381 |
| chr9 | 95004954 | 95008476 | CREB1 | A-549,WA01,K-562,LNCaP,Hep-G2,LNCaP-abl | 95005087 | 95005295 |
| chr9 | 95004954 | 95008476 | CREB1 | WA01 | 95005454 | 95005595 |
| chr9 | 95004954 | 95008476 | CREB1 | A-549,Hep-G2 | 95008268 | 95008473 |
| chr9 | 95004954 | 95008476 | CREB3L1 | K-562 | 95005135 | 95005908 |
| chr9 | 94993465 | 94994155 | CREBBP | LS180 | 94993548 | 94993712 |
| chr9 | 95003886 | 95004722 | CREBBP | PC-3 | 95004346 | 95004660 |
| chr9 | 95004954 | 95008476 | CREBBP | retina | 95005119 | 95005346 |
| chr9 | 95004954 | 95008476 | CREBBP | MCF-7,PC-3 | 95005391 | 95005605 |
| chr9 | 95004954 | 95008476 | CREBBP | fibroblast,keratinocyte | 95006360 | 95006570 |
| chr9 | 95003886 | 95004722 | CREM | GM12878 | 95004148 | 95004312 |
| chr9 | 95004954 | 95008476 | CREM | K-562 | 95005093 | 95005413 |
| chr9 | 95004954 | 95008476 | CREM | Hep-G2 | 95008216 | 95008452 |
| chr9 | 95003886 | 95004722 | CTBP1 | K-562 | 95004062 | 95004685 |
| chr9 | 95004954 | 95008476 | CTBP1 | K-562 | 95004983 | 95005651 |
| chr9 | 95003886 | 95004722 | CTCF | uterus,myotube,hESC,thoracic-aorta,gastrocnemius-medialis,SLK,lung,endothelial,choroid-plexus,Hep-G2,aorta,WA01,A-549,vagina,GM12869,anterior-temporal-cortex,pancreas,fibroblast,glioblastoma,primary-glioblastoma,GM04648,SiHa,HAP1,breast,VU-SCC-147,adrenal-gland,HL-60,K-562,gastroesophageal-sphincter,spleen,VCaP,thyroid-gland,coronary-artery,MDA-MB-157,keratinocyte,THP-1,islet,MM1-S,retina,astrocyte,erythroid,GM04604,heart,esophagus-muscularis-mucosa,tibial-artery,SK-N-SH,primary-epidermal-keratinocyte,liver,LNCaP,BJ,lymphoblast,tibial-nerve,HEK293,GM12871,bonchial,WERI-Rb-1,GM12866,MCF-7L,colon,cardiac,esophagus,prostate,sigmoid-colon,ascending-aorta,Peyers-patch,MCF-7,epithelial,nerve,hiPSC,GM12870,HeLa-S3,T-47D,786-O,IMR-90,Caco-2,stomach,leukemia,WI-38,artery,ovary | 95004082 | 95004382 |
| chr9 | 95004954 | 95008476 | CTCF | esophagus,breast,Peyers-patch,nerve,hiPSC,adrenal-gland,T-47D,gastrocnemius-medialis,786-O,lung,K-562,gastroesophageal-sphincter,anterior-temporal-cortex,retina,erythroid,pancreas,MM1-S,neural | 95005064 | 95005375 |
| chr9 | 95004954 | 95008476 | CTCF | aorta | 95005838 | 95006243 |
| chr9 | 95004954 | 95008476 | CTCF | uterus,endothelial,aorta,fibroblast,primary-glioblastoma,pancreas,HAP1,adrenal-gland,hepatocyte,gastroesophageal-sphincter,thyroid-gland,coronary-artery,islet,RWPE-2,heart,esophagus-muscularis-mucosa,primary-epidermal-keratinocyte,colon,esophagus,ascending-aorta,Peyers-patch,epithelial,HeLa-S3 | 95006430 | 95006653 |
| chr9 | 95004954 | 95008476 | CTCF | gastroesophageal-sphincter,fibroblast,thyroid-gland,keratinocyte | 95008218 | 95008456 |
| chr9 | 95003886 | 95004722 | CTCFL | FT282 | 95003989 | 95004711 |
| chr9 | 95004954 | 95008476 | CTCFL | K-562,FT282,delta-47 | 95005026 | 95005455 |
| chr9 | 95004954 | 95008476 | CTCFL | FT282 | 95005884 | 95006104 |
| chr9 | 95004954 | 95008476 | CTCFL | FT282 | 95006296 | 95006605 |
| chr9 | 95004954 | 95008476 | CTCFL | FT282 | 95007583 | 95007764 |
| chr9 | 95004954 | 95008476 | CTNNB1 | hiPSC | 95005066 | 95005609 |
| chr9 | 95004954 | 95008476 | DAXX | PC-3 | 95006372 | 95006539 |
| chr9 | 95004954 | 95008476 | DAXX | PC-3 | 95008247 | 95008396 |
| chr9 | 95004954 | 95008476 | DDX5 | NTERA2,BT-549 | 95005056 | 95005561 |
| chr9 | 95004954 | 95008476 | DEK | HeLa-S3 | 95006407 | 95006609 |
| chr9 | 95004954 | 95008476 | DLX6 | Hep-G2 | 95008217 | 95008449 |
| chr9 | 94991008 | 94991685 | DMAP1 | Hep-G2 | 94991194 | 94991523 |
| chr9 | 95004954 | 95008476 | DPF2 | BIN-67,GM12878 | 95005013 | 95005512 |
| chr9 | 95004954 | 95008476 | DPF2 | BIN-67 | 95006338 | 95006703 |
| chr9 | 95004954 | 95008476 | DPF2 | BIN-67 | 95007144 | 95007515 |
| chr9 | 95004954 | 95008476 | DPF2 | BIN-67 | 95008222 | 95008439 |
| chr9 | 94991008 | 94991685 | DRAP1 | Hep-G2 | 94991243 | 94991601 |
| chr9 | 94993465 | 94994155 | DRAP1 | Hep-G2 | 94993696 | 94993825 |
| chr9 | 95004954 | 95008476 | DRAP1 | Hep-G2 | 95005501 | 95005638 |
| chr9 | 95004954 | 95008476 | DRAP1 | Hep-G2 | 95006400 | 95006720 |
| chr9 | 95004954 | 95008476 | DRAP1 | Hep-G2 | 95007491 | 95007689 |
| chr9 | 95003886 | 95004722 | E2F1 | MDA-MB-231,HMEC-1,mesenchymal,LNCaP,MCF-7,MM1-S | 95003984 | 95004553 |
| chr9 | 95003886 | 95004722 | E2F1 | HeLa-S3,mesenchymal,LNCaP | 95004503 | 95004706 |
| chr9 | 95004954 | 95008476 | E2F1 | MDA-MB-231 | 95005429 | 95006905 |
| chr9 | 95004954 | 95008476 | E2F1 | MDA-MB-231 | 95007200 | 95007941 |
| chr9 | 95003886 | 95004722 | E2F4 | Hep-G2,K-562 | 95004376 | 95004710 |
| chr9 | 95004954 | 95008476 | E2F4 | Hep-G2 | 95005012 | 95005210 |
| chr9 | 95004954 | 95008476 | E2F4 | K-562 | 95005049 | 95005430 |
| chr9 | 95004954 | 95008476 | E2F4 | Hep-G2 | 95008262 | 95008456 |
| chr9 | 95003886 | 95004722 | E2F6 | K-562 | 95004130 | 95004253 |
| chr9 | 95003886 | 95004722 | E2F6 | WA01,A-549,K-562 | 95004427 | 95004639 |
| chr9 | 95004954 | 95008476 | E2F6 | K-562,WA01 | 95005042 | 95005342 |
| chr9 | 95003886 | 95004722 | E4F1 | K-562 | 95004163 | 95004588 |
| chr9 | 95004954 | 95008476 | EBF3 | SK-N-SH | 95006441 | 95006639 |
| chr9 | 95003886 | 95004722 | EED | ProEs | 95004467 | 95004610 |
| chr9 | 95004954 | 95008476 | EED | ProEs | 95005398 | 95005649 |
| chr9 | 95003886 | 95004722 | EGR1 | A-375 | 95004306 | 95004554 |
| chr9 | 95004954 | 95008476 | EGR1 | GM12878,K-562 | 95005068 | 95005238 |
| chr9 | 95004954 | 95008476 | EGR1 | liver,Hep-G2 | 95006404 | 95006610 |
| chr9 | 95004954 | 95008476 | EGR1 | Hep-G2 | 95007143 | 95007317 |
| chr9 | 95003886 | 95004722 | EHF | RWPE-1 | 95004235 | 95004495 |
| chr9 | 95004954 | 95008476 | EHF | RWPE-1 | 95005439 | 95005960 |
| chr9 | 95004954 | 95008476 | EHF | RWPE-1 | 95006385 | 95006660 |
| chr9 | 95004954 | 95008476 | EHF | RWPE-1 | 95007446 | 95007881 |
| chr9 | 95004954 | 95008476 | EHMT2 | Rh41 | 95005271 | 95005445 |
| chr9 | 95003886 | 95004722 | ELF1 | GM12878 | 95004132 | 95004312 |
| chr9 | 95003886 | 95004722 | ELF1 | Hep-G2,A-549,GM12878 | 95004392 | 95004692 |
| chr9 | 95004954 | 95008476 | ELF1 | ME-1 | 95005033 | 95005431 |
| chr9 | 95004954 | 95008476 | ELF1 | GM12878 | 95005054 | 95005564 |
| chr9 | 95004954 | 95008476 | ELF1 | Hep-G2,K-562 | 95005469 | 95005650 |
| chr9 | 95004954 | 95008476 | ELF1 | Hep-G2 | 95006382 | 95006753 |
| chr9 | 95004954 | 95008476 | ELK1 | WA01 | 95005195 | 95005420 |
| chr9 | 95003886 | 95004722 | ELL2 | HeLa | 95004444 | 95004599 |
| chr9 | 95004954 | 95008476 | ELL2 | HeLa | 95005000 | 95005533 |
| chr9 | 95004954 | 95008476 | ELL2 | HeLa | 95006336 | 95006632 |
| chr9 | 94991008 | 94991685 | EP300 | Hep-G2 | 94991214 | 94991452 |
| chr9 | 94993465 | 94994155 | EP300 | T-47D | 94993783 | 94994053 |
| chr9 | 95003886 | 95004722 | EP300 | MCF-7 | 95004041 | 95004192 |
| chr9 | 95004954 | 95008476 | EP300 | neural | 95005038 | 95005462 |
| chr9 | 95004954 | 95008476 | EP300 | A-549 | 95005496 | 95005706 |
| chr9 | 95004954 | 95008476 | EP300 | A-549,pulmonary-artery,T-47D,fibroblast,Ishikawa,HeLa-S3,SK-N-SH | 95006278 | 95006578 |
| chr9 | 95004954 | 95008476 | EP300 | A-549,HeLa-S3 | 95007573 | 95007909 |
| chr9 | 95003886 | 95004722 | ERG | SKNO-1 | 95004071 | 95004661 |
| chr9 | 95004954 | 95008476 | ERG | VCaP,AMLPZ12,K-562,TSU-1621MT,CD34,MCF-7 | 95005084 | 95005489 |
| chr9 | 95004954 | 95008476 | ERG | VCaP,RWPE-1 | 95006260 | 95006574 |
| chr9 | 95004954 | 95008476 | ERG | VCaP | 95007662 | 95007869 |
| chr9 | 95004954 | 95008476 | ERG | aortic-endothelial-cell | 95008253 | 95008409 |
| chr9 | 94992057 | 94993160 | ESR1 | MCF-7,T-47D,HCC1428 | 94992547 | 94992835 |
| chr9 | 94993465 | 94994155 | ESR1 | T-47D,breast | 94993757 | 94993971 |
| chr9 | 95003886 | 95004722 | ESR1 | MCF-7,U2OS,breast-cancer,pleural-effusion,ZR751,endometrioid-adenocarcinoma,MCF-7L,breast,T-47D,MDA-MB-134-VI,Ishikawa | 95004182 | 95004542 |
| chr9 | 95004954 | 95008476 | ESR1 | MCF-7 | 95005556 | 95005746 |
| chr9 | 95004954 | 95008476 | ESR1 | MCF-7,T-47D | 95006090 | 95006659 |
| chr9 | 95004954 | 95008476 | ESR1 | MCF-7 | 95007426 | 95008021 |
| chr9 | 95003886 | 95004722 | ESR2 | MDA-MB-231 | 95004063 | 95004491 |
| chr9 | 95003886 | 95004722 | ESRRA | BT-474 | 95003960 | 95004343 |
| chr9 | 95004954 | 95008476 | ESRRA | SK-BR-3 | 95008140 | 95008372 |
| chr9 | 95004954 | 95008476 | ESRRG | cardiomyocyte | 95006325 | 95006669 |
| chr9 | 95003886 | 95004722 | ETS1 | A-549 | 95004181 | 95004628 |
| chr9 | 95003886 | 95004722 | ETS1 | SCC-25,cardiomyocyte | 95004320 | 95004712 |
| chr9 | 95004954 | 95008476 | ETS1 | cardiomyocyte,786-O,HUVEC-C,K-562 | 95004958 | 95005335 |
| chr9 | 95004954 | 95008476 | ETS1 | SCC-25,786-O,HUVEC-C | 95005299 | 95005642 |
| chr9 | 95004954 | 95008476 | ETS1 | A-549,HUVEC-C | 95006415 | 95006590 |
| chr9 | 95004954 | 95008476 | ETS1 | A-549 | 95006725 | 95006869 |
| chr9 | 95004954 | 95008476 | ETS1 | A-549 | 95007466 | 95007623 |
| chr9 | 95004954 | 95008476 | ETS1 | HUVEC-C | 95007661 | 95007834 |
| chr9 | 95004954 | 95008476 | ETS1 | A-549,HUVEC-C | 95008168 | 95008428 |
| chr9 | 95003886 | 95004722 | ETV4 | T-47D | 95004175 | 95004473 |
| chr9 | 95004954 | 95008476 | ETV4 | Hep-G2 | 95008230 | 95008390 |
| chr9 | 95003886 | 95004722 | EZH2 | B-cell,peripheral-blood-mononuclear-cell,OCI-Ly7,hepatocyte,DOHH2,Karpas-422,Pfeiffer,prostate-cancer,WSU-DLCL2,WA01,neural,THP-1,GM23338 | 95004086 | 95004579 |
| chr9 | 95004954 | 95008476 | EZH2 | hESC,prostate-cancer | 95005061 | 95005435 |
| chr9 | 95004954 | 95008476 | EZH2 | B-cell,OCI-Ly7,WSU-DLCL2,WA01,neural,neuron,DOHH2,GM23338 | 95005256 | 95005969 |
| chr9 | 95004954 | 95008476 | EZH2 | GM23248 | 95005835 | 95006213 |
| chr9 | 95004954 | 95008476 | EZH2 | neuron | 95006373 | 95006669 |
| chr9 | 95003886 | 95004722 | FLI1 | SKNO-1,TSU-1621MT,HUVEC-C,UAE | 95004369 | 95004652 |
| chr9 | 95004954 | 95008476 | FLI1 | HUVEC-C | 95005097 | 95005352 |
| chr9 | 95004954 | 95008476 | FLI1 | A-673 | 95005466 | 95005682 |
| chr9 | 95003886 | 95004722 | FOSB | A-549 | 95004207 | 95004437 |
| chr9 | 94993465 | 94994155 | FOS | leiomyoma,myometrium | 94993633 | 94993717 |
| chr9 | 95003886 | 95004722 | FOS | leiomyoma | 95004162 | 95004236 |
| chr9 | 95004954 | 95008476 | FOS | CFPAC-1,myometrium,MCF-10A,leiomyoma,HeLa-S3,endothelial,MCF-7 | 95006279 | 95006500 |
| chr9 | 95004954 | 95008476 | FOS | myometrium | 95007702 | 95007787 |
| chr9 | 95004954 | 95008476 | FOSL1 | BT-549 | 95005006 | 95005275 |
| chr9 | 95004954 | 95008476 | FOSL1 | BT-549 | 95006272 | 95006590 |
| chr9 | 94991008 | 94991685 | FOSL2 | A-549 | 94991295 | 94991521 |
| chr9 | 95003886 | 95004722 | FOSL2 | A-549,Hep-G2 | 95004377 | 95004611 |
| chr9 | 95004954 | 95008476 | FOSL2 | A-549 | 95005468 | 95005712 |
| chr9 | 95004954 | 95008476 | FOSL2 | A-549,Hep-G2,hESC,NPC,SK-N-SH | 95006227 | 95006551 |
| chr9 | 95004954 | 95008476 | FOSL2 | A-549 | 95007412 | 95007651 |
| chr9 | 95004954 | 95008476 | FOSL2 | A-549 | 95007713 | 95007868 |
| chr9 | 95004954 | 95008476 | FOSL2 | A-549,Hep-G2 | 95008077 | 95008437 |
| chr9 | 94991008 | 94991685 | FOXA1 | A-549 | 94991275 | 94991430 |
| chr9 | 94991008 | 94991685 | FOXA1 | breast-cancer,breast | 94991448 | 94991649 |
| chr9 | 94992057 | 94993160 | FOXA1 | breast-cancer | 94992415 | 94992739 |
| chr9 | 94993465 | 94994155 | FOXA1 | T-47D,LNCaP,MCF-7,liver,breast-cancer | 94993734 | 94993955 |
| chr9 | 95003886 | 95004722 | FOXA1 | LS180,breast-cancer,MCF-7 | 95004058 | 95004486 |
| chr9 | 95004954 | 95008476 | FOXA1 | LS180,LNCaP | 95005048 | 95005294 |
| chr9 | 95004954 | 95008476 | FOXA1 | breast-cancer | 95005359 | 95005619 |
| chr9 | 95004954 | 95008476 | FOXA1 | breast-cancer,VCaP | 95005852 | 95006120 |
| chr9 | 95004954 | 95008476 | FOXA1 | T-47D,NCI-H3122,VCaP,A-549,liver,breast-cancer | 95006372 | 95006597 |
| chr9 | 95004954 | 95008476 | FOXA1 | breast-cancer | 95007227 | 95007456 |
| chr9 | 95004954 | 95008476 | FOXA1 | VCaP | 95007368 | 95008111 |
| chr9 | 94993465 | 94994155 | FOXA2 | liver | 94993752 | 94993981 |
| chr9 | 95003886 | 95004722 | FOXA2 | BJ1-hTERT | 95004098 | 95004692 |
| chr9 | 95004954 | 95008476 | FOXA2 | BJ1-hTERT | 95005386 | 95005694 |
| chr9 | 95004954 | 95008476 | FOXA2 | BJ1-hTERT,PANC-1,liver,KerCT | 95006258 | 95006568 |
| chr9 | 95004954 | 95008476 | FOXL2 | HGrC1,KGN | 95005711 | 95005994 |
| chr9 | 95004954 | 95008476 | FOXL2 | HGrC1,KGN,SVOG-3e | 95006218 | 95006537 |
| chr9 | 95004954 | 95008476 | FOXL2 | HGrC1 | 95007774 | 95007948 |
| chr9 | 94991008 | 94991685 | FOXP1 | Hep-G2 | 94991288 | 94991464 |
| chr9 | 95004954 | 95008476 | FOXP1 | H9 | 95005012 | 95005236 |
| chr9 | 95004954 | 95008476 | FOXP2 | PFSK1 | 95005164 | 95005317 |
| chr9 | 94991008 | 94991685 | FOXP4 | Hep-G2 | 94991140 | 94991411 |
| chr9 | 95003886 | 95004722 | FUS | Hep-G2 | 95004531 | 95004705 |
| chr9 | 95004954 | 95008476 | FUS | Hep-G2 | 95005164 | 95005474 |
| chr9 | 94993465 | 94994155 | GABPA | VCaP | 94994001 | 94994142 |
| chr9 | 95004954 | 95008476 | GABPA | WA01,K-562 | 95005070 | 95005273 |
| chr9 | 95004954 | 95008476 | GABPA | WA01 | 95005375 | 95005546 |
| chr9 | 95004954 | 95008476 | GABPA | VCaP | 95007699 | 95007830 |
| chr9 | 95003886 | 95004722 | GATA1 | K-562 | 95003962 | 95004175 |
| chr9 | 95003886 | 95004722 | GATA1 | CD34 | 95004164 | 95004224 |
| chr9 | 94993465 | 94994155 | GATA2 | SH-SY5Y,primary-endometrial-stromal-cell | 94993818 | 94994056 |
| chr9 | 95003886 | 95004722 | GATA2 | ESF,dermal-fibroblast | 95003922 | 95004235 |
| chr9 | 95004954 | 95008476 | GATA2 | ME-1 | 95005041 | 95005326 |
| chr9 | 95004954 | 95008476 | GATA2 | ESF,dermal-fibroblast,endothelial | 95006323 | 95006535 |
| chr9 | 94993465 | 94994155 | GATA3 | T-47D | 94993766 | 94994044 |
| chr9 | 95003886 | 95004722 | GATA3 | A-549,MCF-7,T-47D | 95003948 | 95004292 |
| chr9 | 95003886 | 95004722 | GATA3 | breast,T-47D | 95004477 | 95004684 |
| chr9 | 95004954 | 95008476 | GATA3 | A-549 | 95005074 | 95005252 |
| chr9 | 95004954 | 95008476 | GATA3 | A-549 | 95005366 | 95005689 |
| chr9 | 95004954 | 95008476 | GATA3 | A-549,T-47D | 95006307 | 95006618 |
| chr9 | 95004954 | 95008476 | GATA4 | G296S,BJ1-hTERT | 95006223 | 95006597 |
| chr9 | 95003886 | 95004722 | GATA6 | YCC-3,HUES-8,PATU8988,OACP4-C | 95004020 | 95004376 |
| chr9 | 95004954 | 95008476 | GATA6 | PATU8988 | 95005365 | 95005574 |
| chr9 | 95004954 | 95008476 | GATA6 | OACP4-C | 95006140 | 95006637 |
| chr9 | 95003886 | 95004722 | GATAD2B | GM12878 | 95004324 | 95004616 |
| chr9 | 95004954 | 95008476 | GATAD2B | K-562,GM12878 | 95005049 | 95005485 |
| chr9 | 95003886 | 95004722 | GFI1B | K-562 | 95004255 | 95004366 |
| chr9 | 95004954 | 95008476 | GFI1B | K-562 | 95005082 | 95005203 |
| chr9 | 95003886 | 95004722 | GLIS1 | HEK293 | 95004248 | 95004690 |
| chr9 | 95004954 | 95008476 | GLIS1 | HEK293 | 95005360 | 95005611 |
| chr9 | 95004954 | 95008476 | GLIS2 | HEK293,HCT-116 | 95005284 | 95005617 |
| chr9 | 95003886 | 95004722 | GLIS3 | H9 | 95004236 | 95004679 |
| chr9 | 95004954 | 95008476 | GLIS3 | H9 | 95008147 | 95008461 |
| chr9 | 94992057 | 94993160 | GMEB1 | Hep-G2 | 94992725 | 94992907 |
| chr9 | 95003886 | 95004722 | GMEB1 | Hep-G2 | 95004440 | 95004688 |
| chr9 | 95004954 | 95008476 | GMEB1 | Hep-G2 | 95008163 | 95008394 |
| chr9 | 94992057 | 94993160 | GTF2B | IMR-90 | 94992666 | 94992830 |
| chr9 | 94992057 | 94993160 | GTF2F1 | Hep-G2 | 94992132 | 94992362 |
| chr9 | 95003886 | 95004722 | GTF2F1 | K-562 | 95004114 | 95004279 |
| chr9 | 95003886 | 95004722 | GTF2F1 | MCF-7,K-562 | 95004284 | 95004625 |
| chr9 | 95004954 | 95008476 | GTF2F1 | HeLa-S3,Hep-G2 | 95006356 | 95006596 |
| chr9 | 95004954 | 95008476 | GTF2F1 | Hep-G2 | 95008159 | 95008408 |
| chr9 | 95003886 | 95004722 | GTF3C2 | H9 | 95004396 | 95004607 |
| chr9 | 95004954 | 95008476 | HAND2 | SK-N-BE2-C | 95008164 | 95008407 |
| chr9 | 94992057 | 94993160 | HBP1 | Hep-G2 | 94992065 | 94992284 |
| chr9 | 95003886 | 95004722 | HBP1 | Hep-G2 | 95004402 | 95004643 |
| chr9 | 95004954 | 95008476 | HBP1 | Hep-G2 | 95008144 | 95008440 |
| chr9 | 95004954 | 95008476 | HCFC1 | K-562,GM12878 | 95005115 | 95005278 |
| chr9 | 95003886 | 95004722 | HDAC1 | K-562,Hep-G2,MCF-7,PC-3 | 95004368 | 95004716 |
| chr9 | 95004954 | 95008476 | HDAC1 | MCF-7 | 95006205 | 95006738 |
| chr9 | 95004954 | 95008476 | HDAC1 | MCF-7 | 95006364 | 95006719 |
| chr9 | 95004954 | 95008476 | HDAC1 | MCF-7 | 95007342 | 95007694 |
| chr9 | 95004954 | 95008476 | HDAC1 | MCF-7 | 95007659 | 95007891 |
| chr9 | 94991008 | 94991685 | HDAC2 | Hep-G2 | 94991225 | 94991452 |
| chr9 | 95003886 | 95004722 | HDAC2 | MCF-7,RH4,K-562,Hep-G2,WA01,VCaP,PC-3 | 95004292 | 95004555 |
| chr9 | 95004954 | 95008476 | HDAC2 | K-562,Hep-G2,WA01,VCaP,PC-3 | 95005126 | 95005469 |
| chr9 | 95004954 | 95008476 | HDAC2 | Hep-G2 | 95008142 | 95008464 |
| chr9 | 95003886 | 95004722 | HDAC3 | RH4 | 95004132 | 95004523 |
| chr9 | 95003886 | 95004722 | HEXIM1 | HCT-116 | 95004293 | 95004681 |
| chr9 | 95004954 | 95008476 | HEXIM1 | HCT-116 | 95005061 | 95005257 |
| chr9 | 95004954 | 95008476 | HEXIM1 | HCT-116 | 95005333 | 95005545 |
| chr9 | 95004954 | 95008476 | HHEX | Hep-G2 | 95008225 | 95008442 |
| chr9 | 95004954 | 95008476 | HIF1A | BEAS-2B | 95005032 | 95005721 |
| chr9 | 95004954 | 95008476 | HIF1A | BEAS-2B | 95006386 | 95006628 |
| chr9 | 95004954 | 95008476 | HIF1A | BEAS-2B | 95008096 | 95008469 |
| chr9 | 95004954 | 95008476 | HIF3A | Hep-3B2-1-7 | 95005026 | 95005483 |
| chr9 | 95003886 | 95004722 | HIVEP1 | Hep-G2 | 95004223 | 95004706 |
| chr9 | 94991008 | 94991685 | HLF | Hep-G2 | 94991297 | 94991441 |
| chr9 | 95004954 | 95008476 | HMGN3 | K-562 | 95005042 | 95005494 |
| chr9 | 94991008 | 94991685 | HNF4A | Hep-G2 | 94991300 | 94991416 |
| chr9 | 94993465 | 94994155 | HNF4A | liver | 94993753 | 94993939 |
| chr9 | 95003886 | 95004722 | HNF4A | KATO-III,HCT-116 | 95003940 | 95004231 |
| chr9 | 95003886 | 95004722 | HNF4A | gastric-epithelial-cell | 95004033 | 95004362 |
| chr9 | 95004954 | 95008476 | HNF4A | KATO-III | 95006324 | 95006553 |
| chr9 | 95004954 | 95008476 | HNF4A | liver | 95007779 | 95007917 |
| chr9 | 94991008 | 94991685 | HNF4G | Hep-G2 | 94991281 | 94991534 |
| chr9 | 95003886 | 95004722 | HNF4G | Hep-G2 | 95004433 | 95004717 |
| chr9 | 95004954 | 95008476 | HNF4G | 22Rv1 | 95005166 | 95005329 |
| chr9 | 95004954 | 95008476 | HOXA9 | HEK293-FT | 95005759 | 95005977 |
| chr9 | 95004954 | 95008476 | HOXB13 | prostate-cancer | 95005104 | 95005173 |
| chr9 | 95004954 | 95008476 | HOXB13 | G-401,prostate-cancer | 95006152 | 95006339 |
| chr9 | 95004954 | 95008476 | HOXB13 | G-401 | 95006604 | 95006866 |
| chr9 | 95004954 | 95008476 | HOXB8 | CFPAC-1 | 95006259 | 95006539 |
| chr9 | 95004954 | 95008476 | ID3 | K-562 | 95005212 | 95005494 |
| chr9 | 95003886 | 95004722 | ILF3 | K-562 | 95004132 | 95004609 |
| chr9 | 95004954 | 95008476 | IRF1 | PDAC | 95007560 | 95008003 |
| chr9 | 95004954 | 95008476 | IRF1 | PDAC | 95008091 | 95008389 |
| chr9 | 95003886 | 95004722 | IRF2 | keratinocyte | 95004418 | 95004587 |
| chr9 | 95004954 | 95008476 | IRF2 | keratinocyte | 95005033 | 95005180 |
| chr9 | 95004954 | 95008476 | IRF2 | keratinocyte | 95005476 | 95005685 |
| chr9 | 95004954 | 95008476 | JARID2 | UTEIPS6,MRC-5,AMIPS6,UTEIPS7,UTEIPS11 | 95005060 | 95005593 |
| chr9 | 95004954 | 95008476 | JUNB | CFPAC-1 | 95006034 | 95006464 |
| chr9 | 95004954 | 95008476 | JUNB | MCF10A-Er-Src,HAEC | 95006324 | 95006573 |
| chr9 | 95004954 | 95008476 | JUNB | HAEC | 95007537 | 95007828 |
| chr9 | 95004954 | 95008476 | JUNB | HAEC | 95008228 | 95008463 |
| chr9 | 94991008 | 94991685 | JUND | liver | 94991280 | 94991569 |
| chr9 | 95003886 | 95004722 | JUND | GP5D,A-549 | 95004140 | 95004347 |
| chr9 | 95003886 | 95004722 | JUND | Hep-G2,A-549 | 95004466 | 95004686 |
| chr9 | 95004954 | 95008476 | JUND | Hep-G2 | 95004983 | 95005116 |
| chr9 | 95004954 | 95008476 | JUND | Hep-G2 | 95005297 | 95005399 |
| chr9 | 95004954 | 95008476 | JUND | A-549 | 95005358 | 95005537 |
| chr9 | 95004954 | 95008476 | JUND | A-549,liver,HT29,SK-N-SH,HeLa-S3 | 95006269 | 95006591 |
| chr9 | 95004954 | 95008476 | JUND | liver | 95007791 | 95007969 |
| chr9 | 94993465 | 94994155 | JUN | myometrium | 94993641 | 94993724 |
| chr9 | 95004954 | 95008476 | JUN | Karpas-299 | 95005371 | 95005608 |
| chr9 | 95004954 | 95008476 | JUN | HAEC,HeLa-S3,endothelial,MCF10A-Er-Src,myometrium,BT-549,leiomyoma,786-O,primary-lung-fibroblast | 95006334 | 95006524 |
| chr9 | 95004954 | 95008476 | JUN | HAEC | 95007620 | 95007790 |
| chr9 | 95004954 | 95008476 | JUN | HAEC | 95007954 | 95008088 |
| chr9 | 95003886 | 95004722 | KLF10 | HEK293 | 95004197 | 95004572 |
| chr9 | 95003886 | 95004722 | KLF12 | HEK293 | 95004522 | 95004668 |
| chr9 | 95003886 | 95004722 | KLF1 | HEK293 | 95004241 | 95004598 |
| chr9 | 95003886 | 95004722 | KLF4 | PDAC,keratinocyte | 95004030 | 95004364 |
| chr9 | 95004954 | 95008476 | KLF4 | BJ | 95007698 | 95007819 |
| chr9 | 95004954 | 95008476 | KLF4 | PDAC | 95007940 | 95008351 |
| chr9 | 95003886 | 95004722 | KLF5 | KATO-III,HCC95 | 95004164 | 95004446 |
| chr9 | 95003886 | 95004722 | KLF5 | HEK293,KATO-III | 95004359 | 95004637 |
| chr9 | 95004954 | 95008476 | KLF5 | KATO-III | 95006456 | 95006642 |
| chr9 | 94991008 | 94991685 | KLF6 | Hep-G2 | 94991269 | 94991458 |
| chr9 | 95004954 | 95008476 | KLF6 | Hep-G2 | 95005037 | 95005179 |
| chr9 | 95004954 | 95008476 | KLF6 | Hep-G2 | 95005486 | 95005611 |
| chr9 | 95004954 | 95008476 | KLF6 | Hep-G2 | 95006351 | 95006667 |
| chr9 | 95004954 | 95008476 | KLF6 | PDAC | 95007637 | 95008173 |
| chr9 | 95003886 | 95004722 | KLF8 | HEK293 | 95004085 | 95004647 |
| chr9 | 95003886 | 95004722 | KLF9 | GBM1A | 95004122 | 95004301 |
| chr9 | 95004954 | 95008476 | KLF9 | GBM1A | 95005080 | 95005224 |
| chr9 | 95003886 | 95004722 | L3MBTL2 | K-562 | 95004139 | 95004666 |
| chr9 | 95004954 | 95008476 | L3MBTL2 | K-562 | 95005042 | 95005607 |
| chr9 | 94992057 | 94993160 | L3MBTL4 | Hep-G2 | 94992154 | 94992320 |
| chr9 | 95004954 | 95008476 | L3MBTL4 | Hep-G2 | 95008192 | 95008385 |
| chr9 | 95004954 | 95008476 | LHX2 | retina | 95006177 | 95006470 |
| chr9 | 95003886 | 95004722 | LMO2 | Kasumi-1 | 95004292 | 95004582 |
| chr9 | 95004954 | 95008476 | MAF1 | THP-1 | 95005195 | 95005475 |
| chr9 | 95004954 | 95008476 | MAFB | islet | 95006387 | 95006559 |
| chr9 | 95004954 | 95008476 | MAFB | islet | 95008325 | 95008475 |
| chr9 | 95004954 | 95008476 | MAFF | HeLa-S3 | 95006376 | 95006570 |
| chr9 | 95003886 | 95004722 | MAF | CD4 | 95004017 | 95004194 |
| chr9 | 95003886 | 95004722 | MAF | CD4 | 95004438 | 95004631 |
| chr9 | 95004954 | 95008476 | MAML1 | SCC | 95006256 | 95006541 |
| chr9 | 94992057 | 94993160 | MAX | Hep-G2 | 94992611 | 94992779 |
| chr9 | 95003886 | 95004722 | MAX | MCF-7,SK-N-SH,K-562 | 95004111 | 95004392 |
| chr9 | 95004954 | 95008476 | MAX | NCI-H128,A-549,Hep-G2,Ishikawa,K-562,P493-6 | 95005137 | 95005458 |
| chr9 | 95004954 | 95008476 | MAX | A-549,Hep-G2,HeLa-S3,Ishikawa,liver,SK-N-SH | 95006379 | 95006596 |
| chr9 | 95004954 | 95008476 | MAX | Hep-G2 | 95007172 | 95007312 |
| chr9 | 95004954 | 95008476 | MAX | HeLa-S3 | 95007666 | 95007847 |
| chr9 | 95004954 | 95008476 | MAX | Hep-G2,liver,SK-N-SH,A-549 | 95008192 | 95008476 |
| chr9 | 95003886 | 95004722 | MAZ | IMR-90,K-562 | 95004139 | 95004318 |
| chr9 | 95003886 | 95004722 | MAZ | Hep-G2,IMR-90,HEK293,HeLa-S3,MCF-7,K-562 | 95004373 | 95004684 |
| chr9 | 95004954 | 95008476 | MAZ | IMR-90 | 95005036 | 95005138 |
| chr9 | 95004954 | 95008476 | MAZ | IMR-90,K-562 | 95005157 | 95005310 |
| chr9 | 95004954 | 95008476 | MAZ | Hep-G2,HEK293 | 95008184 | 95008444 |
| chr9 | 94992057 | 94993160 | MBD1 | Hep-G2 | 94992110 | 94992330 |
| chr9 | 95003886 | 95004722 | MBD1 | Hep-G2 | 95004334 | 95004456 |
| chr9 | 94992057 | 94993160 | MBD3 | MCF-7 | 94992286 | 94992461 |
| chr9 | 94992057 | 94993160 | MBD3 | MCF-7 | 94993007 | 94993157 |
| chr9 | 95004954 | 95008476 | MBD3 | HEK293T | 95005164 | 95005509 |
| chr9 | 95004954 | 95008476 | MBD3 | MCF-7 | 95005687 | 95006023 |
| chr9 | 94993465 | 94994155 | MED12 | leiomyoma,myometrium | 94993563 | 94993803 |
| chr9 | 94993465 | 94994155 | MED12 | myometrium | 94993872 | 94993976 |
| chr9 | 95003886 | 95004722 | MED12 | leiomyoma | 95003955 | 95004014 |
| chr9 | 95003886 | 95004722 | MED12 | myometrium | 95004110 | 95004167 |
| chr9 | 95003886 | 95004722 | MED12 | leiomyoma,myometrium | 95004160 | 95004244 |
| chr9 | 95004954 | 95008476 | MED12 | myometrium | 95004981 | 95005041 |
| chr9 | 95004954 | 95008476 | MED12 | MCF-7 | 95005082 | 95005365 |
| chr9 | 95004954 | 95008476 | MED12 | myometrium | 95005618 | 95005687 |
| chr9 | 95004954 | 95008476 | MED12 | leiomyoma,myometrium | 95006336 | 95006648 |
| chr9 | 95004954 | 95008476 | MED12 | leiomyoma,myometrium | 95007658 | 95007869 |
| chr9 | 95004954 | 95008476 | MED12 | leiomyoma | 95008138 | 95008241 |
| chr9 | 95004954 | 95008476 | MED12 | leiomyoma | 95008186 | 95008259 |
| chr9 | 95004954 | 95008476 | MED12 | leiomyoma | 95008358 | 95008457 |
| chr9 | 94992057 | 94993160 | MEF2A | Hep-G2 | 94992161 | 94992315 |
| chr9 | 95003886 | 95004722 | MEF2A | Hep-G2 | 95004478 | 95004641 |
| chr9 | 95004954 | 95008476 | MEF2A | SK-N-SH | 95006306 | 95006541 |
| chr9 | 95004954 | 95008476 | MEF2A | Hep-G2 | 95007988 | 95008468 |
| chr9 | 95003886 | 95004722 | MEN1 | MCF-7 | 95003919 | 95004351 |
| chr9 | 95004954 | 95008476 | MEN1 | PC-3 | 95005509 | 95005711 |
| chr9 | 95004954 | 95008476 | MEN1 | MCF-7 | 95005625 | 95005838 |
| chr9 | 95004954 | 95008476 | MEN1 | MCF-7 | 95005852 | 95006624 |
| chr9 | 95004954 | 95008476 | MEN1 | MCF-7 | 95007729 | 95008425 |
| chr9 | 95003886 | 95004722 | MITF | melanocyte | 95004394 | 95004604 |
| chr9 | 94991008 | 94991685 | MLX | Hep-G2 | 94991265 | 94991428 |
| chr9 | 95003886 | 95004722 | MLX | Hep-G2 | 95004508 | 95004641 |
| chr9 | 95003886 | 95004722 | MNT | Hep-G2 | 95003900 | 95004190 |
| chr9 | 95004954 | 95008476 | MNT | Hep-G2 | 95005070 | 95005621 |
| chr9 | 95003886 | 95004722 | MSX2 | MCF-7 | 95004241 | 95004514 |
| chr9 | 94991008 | 94991685 | MTA1 | Hep-G2 | 94991022 | 94991235 |
| chr9 | 94992057 | 94993160 | MTA1 | Hep-G2 | 94992602 | 94992776 |
| chr9 | 95003886 | 95004722 | MTA1 | K-562 | 95004058 | 95004453 |
| chr9 | 95004954 | 95008476 | MTA1 | Hep-G2 | 95004996 | 95005455 |
| chr9 | 95003886 | 95004722 | MTA2 | pre-B-cell | 95004082 | 95004291 |
| chr9 | 95004954 | 95008476 | MTA2 | K-562 | 95005468 | 95005910 |
| chr9 | 95003886 | 95004722 | MTA3 | K-562 | 95004162 | 95004598 |
| chr9 | 95004954 | 95008476 | MTA3 | K-562 | 95005140 | 95005658 |
| chr9 | 95003886 | 95004722 | MTF2 | DU145 | 95004116 | 95004604 |
| chr9 | 95004954 | 95008476 | MTF2 | DU145 | 95005032 | 95005583 |
| chr9 | 94992057 | 94993160 | MXD4 | Hep-G2 | 94992676 | 94992845 |
| chr9 | 95003886 | 95004722 | MXD4 | Hep-G2 | 95004074 | 95004249 |
| chr9 | 95003886 | 95004722 | MXD4 | Hep-G2 | 95004333 | 95004709 |
| chr9 | 95004954 | 95008476 | MXD4 | Hep-G2 | 95005038 | 95005239 |
| chr9 | 95004954 | 95008476 | MXD4 | Hep-G2 | 95005392 | 95005710 |
| chr9 | 95004954 | 95008476 | MXD4 | Hep-G2 | 95006296 | 95006637 |
| chr9 | 94992057 | 94993160 | MXI1 | Hep-G2 | 94992129 | 94992318 |
| chr9 | 95003886 | 95004722 | MXI1 | IMR-90 | 95004113 | 95004252 |
| chr9 | 95003886 | 95004722 | MXI1 | IMR-90,SK-N-SH | 95004444 | 95004664 |
| chr9 | 95004954 | 95008476 | MXI1 | IMR-90,neural | 95005008 | 95005466 |
| chr9 | 95004954 | 95008476 | MXI1 | IMR-90,SK-N-SH,HeLa-S3 | 95006385 | 95006599 |
| chr9 | 95004954 | 95008476 | MXI1 | Hep-G2 | 95008253 | 95008380 |
| chr9 | 94991008 | 94991685 | MYBL2 | Hep-G2 | 94991253 | 94991431 |
| chr9 | 94992057 | 94993160 | MYBL2 | Hep-G2 | 94992621 | 94992920 |
| chr9 | 95003886 | 95004722 | MYBL2 | A-673,Hep-G2 | 95003926 | 95004676 |
| chr9 | 95004954 | 95008476 | MYBL2 | A-673 | 95005024 | 95005559 |
| chr9 | 95004954 | 95008476 | MYBL2 | Hep-G2 | 95005406 | 95005660 |
| chr9 | 95004954 | 95008476 | MYBL2 | Hep-G2 | 95006389 | 95006636 |
| chr9 | 95004954 | 95008476 | MYBL2 | Hep-G2 | 95007601 | 95007739 |
| chr9 | 95004954 | 95008476 | MYBL2 | Hep-G2 | 95008189 | 95008476 |
| chr9 | 94991008 | 94991685 | MYC | P493-6,MCF-7 | 94991009 | 94991150 |
| chr9 | 94992057 | 94993160 | MYC | MCF-7 | 94992085 | 94992257 |
| chr9 | 95003886 | 95004722 | MYC | U2OS | 95004148 | 95004239 |
| chr9 | 95004954 | 95008476 | MYC | BE2C,K-562,CD34,LNCaP,P493-6 | 95004974 | 95005442 |
| chr9 | 95004954 | 95008476 | MYC | NB69,K-562 | 95005516 | 95005746 |
| chr9 | 95004954 | 95008476 | MYC | BE2C | 95005757 | 95006203 |
| chr9 | 95004954 | 95008476 | MYC | HeLa-S3,MCF-10A,BJ | 95006388 | 95006556 |
| chr9 | 95004954 | 95008476 | MYC | HeLa-S3,MCF-10A,BJ | 95007652 | 95007829 |
| chr9 | 95003886 | 95004722 | MYCN | SH-EP | 95004162 | 95004276 |
| chr9 | 95004954 | 95008476 | MYCN | COG-N-415,LA-N-5,NB-1643,SHEP-21N | 95005407 | 95005688 |
| chr9 | 95004954 | 95008476 | MYCN | SHEP-21N,MYCN-3 | 95006394 | 95006582 |
| chr9 | 95004954 | 95008476 | MYCN | COG-N-415,MYCN-3 | 95006614 | 95006860 |
| chr9 | 95004954 | 95008476 | MYCN | COG-N-415 | 95007078 | 95007381 |
| chr9 | 95004954 | 95008476 | MYCN | LA-N-5 | 95007639 | 95007960 |
| chr9 | 94991008 | 94991685 | MYNN | Hep-G2 | 94991359 | 94991502 |
| chr9 | 94992057 | 94993160 | MYNN | Hep-G2 | 94992076 | 94992315 |
| chr9 | 95003886 | 95004722 | MYNN | Hep-G2 | 95004072 | 95004264 |
| chr9 | 95003886 | 95004722 | MYNN | Hep-G2 | 95004375 | 95004715 |
| chr9 | 95004954 | 95008476 | MYNN | Hep-G2 | 95005416 | 95005631 |
| chr9 | 95004954 | 95008476 | MYNN | Hep-G2 | 95008168 | 95008453 |
| chr9 | 95004954 | 95008476 | MYOCD | A-549 | 95005142 | 95005431 |
| chr9 | 95003886 | 95004722 | MYOD1 | rhabdomyosarcoma,IMR-90 | 95004302 | 95004638 |
| chr9 | 95004954 | 95008476 | MYOD1 | IMR-90 | 95004971 | 95005449 |
| chr9 | 95004954 | 95008476 | MYOD1 | RD,RH30 | 95008152 | 95008466 |
| chr9 | 95003886 | 95004722 | NANOG | WA01 | 95004364 | 95004686 |
| chr9 | 95003886 | 95004722 | NCOA2 | MCF-7 | 95004090 | 95004251 |
| chr9 | 95003886 | 95004722 | NCOA3 | MCF-7 | 95004046 | 95004276 |
| chr9 | 95003886 | 95004722 | NEUROD1 | D283-Med,D341-Med | 95004010 | 95004393 |
| chr9 | 95003886 | 95004722 | NEUROD1 | D341-Med | 95004419 | 95004578 |
| chr9 | 95004954 | 95008476 | NEUROD1 | D283-Med | 95005853 | 95006166 |
| chr9 | 95004954 | 95008476 | NEUROD1 | D341-Med | 95007128 | 95007336 |
| chr9 | 95004954 | 95008476 | NEUROD1 | D341-Med | 95007613 | 95007828 |
| chr9 | 95004954 | 95008476 | NEUROG2 | MRC-5 | 95008166 | 95008359 |
| chr9 | 95003886 | 95004722 | NFAT5 | Hep-G2 | 95004287 | 95004656 |
| chr9 | 95004954 | 95008476 | NFAT5 | Hep-G2 | 95005001 | 95005220 |
| chr9 | 95004954 | 95008476 | NFAT5 | Hep-G2 | 95005333 | 95005521 |
| chr9 | 95004954 | 95008476 | NFAT5 | Hep-G2 | 95008206 | 95008448 |
| chr9 | 95003886 | 95004722 | NFATC1 | HUVEC-C | 95003957 | 95004204 |
| chr9 | 95003886 | 95004722 | NFATC1 | HUVEC-C | 95004298 | 95004650 |
| chr9 | 95003886 | 95004722 | NFATC3 | Hep-G2 | 95004408 | 95004625 |
| chr9 | 95003886 | 95004722 | NFE2 | ProEs | 95004141 | 95004237 |
| chr9 | 95003886 | 95004722 | NFE2 | ProEs | 95004607 | 95004709 |
| chr9 | 95004954 | 95008476 | NFE2 | K-562 | 95006157 | 95006357 |
| chr9 | 95003886 | 95004722 | NFE2L2 | A-549 | 95004184 | 95004626 |
| chr9 | 95004954 | 95008476 | NFE2L2 | BEAS-2B,A-549 | 95005396 | 95005682 |
| chr9 | 95004954 | 95008476 | NFE2L2 | HeLa-S3 | 95006392 | 95006552 |
| chr9 | 95004954 | 95008476 | NFE2L2 | A-549 | 95006512 | 95006719 |
| chr9 | 95003886 | 95004722 | NFIC | Ishikawa | 95004341 | 95004572 |
| chr9 | 95004954 | 95008476 | NFIC | Ishikawa,SK-N-SH | 95006266 | 95006656 |
| chr9 | 95004954 | 95008476 | NFIC | SK-N-SH | 95007610 | 95007832 |
| chr9 | 95004954 | 95008476 | NFIC | Hep-G2 | 95008208 | 95008404 |
| chr9 | 95004954 | 95008476 | NFIL3 | Hep-G2 | 95008257 | 95008398 |
| chr9 | 95004954 | 95008476 | NFKB1 | L1236 | 95005208 | 95005352 |
| chr9 | 95004954 | 95008476 | NFKB1 | HEK293T | 95005330 | 95005584 |
| chr9 | 95004954 | 95008476 | NFKB1 | L1236 | 95007334 | 95007472 |
| chr9 | 95004954 | 95008476 | NFKB1 | MCF10A-Er-Src,L1236 | 95007704 | 95007880 |
| chr9 | 95004954 | 95008476 | NFKB2 | L1236 | 95007702 | 95007887 |
| chr9 | 94991008 | 94991685 | NFKBIZ | Hep-G2 | 94991272 | 94991482 |
| chr9 | 94992057 | 94993160 | NFKBIZ | Hep-G2 | 94992676 | 94992820 |
| chr9 | 95003886 | 95004722 | NFKBIZ | Hep-G2 | 95004086 | 95004231 |
| chr9 | 95004954 | 95008476 | NFKBIZ | Hep-G2 | 95005425 | 95005660 |
| chr9 | 94992057 | 94993160 | NFYA | Hep-G2 | 94992081 | 94992333 |
| chr9 | 95003886 | 95004722 | NFYA | Hep-G2 | 95004473 | 95004683 |
| chr9 | 95003886 | 95004722 | NFYB | Hep-G2 | 95004326 | 95004635 |
| chr9 | 95004954 | 95008476 | NFYB | Hep-G2 | 95008213 | 95008464 |
| chr9 | 94992057 | 94993160 | NFYC | Hep-G2 | 94992085 | 94992253 |
| chr9 | 95004954 | 95008476 | NFYC | Hep-G2 | 95008206 | 95008420 |
| chr9 | 95004954 | 95008476 | NONO | K-562,Hep-G2 | 95005032 | 95005379 |
| chr9 | 95004954 | 95008476 | NOTCH3 | TALL-1 | 95006427 | 95006605 |
| chr9 | 95003886 | 95004722 | NR1H2 | HT29 | 95004086 | 95004287 |
| chr9 | 95004954 | 95008476 | NR1H2 | HT29 | 95006371 | 95006761 |
| chr9 | 95004954 | 95008476 | NR1H2 | HT29 | 95007584 | 95007788 |
| chr9 | 95003886 | 95004722 | NR2F1 | GM12878,K-562 | 95004187 | 95004652 |
| chr9 | 95004954 | 95008476 | NR2F1 | GM12878,K-562,neuron-progenitor | 95005160 | 95005622 |
| chr9 | 94991008 | 94991685 | NR2F2 | Hep-G2 | 94991266 | 94991416 |
| chr9 | 95003886 | 95004722 | NR2F2 | liver,MCF-7 | 95004088 | 95004414 |
| chr9 | 95003886 | 95004722 | NR2F2 | K-562,MCF-7 | 95004418 | 95004628 |
| chr9 | 95004954 | 95008476 | NR2F2 | MCF-7 | 95005405 | 95005576 |
| chr9 | 95004954 | 95008476 | NR2F2 | liver | 95006382 | 95006750 |
| chr9 | 95004954 | 95008476 | NR2F2 | liver | 95007267 | 95007566 |
| chr9 | 95004954 | 95008476 | NR2F2 | liver | 95007518 | 95007723 |
| chr9 | 95004954 | 95008476 | NR2F2 | liver | 95007714 | 95007954 |
| chr9 | 94991008 | 94991685 | NR2F6 | Hep-G2 | 94991243 | 94991414 |
| chr9 | 95003886 | 95004722 | NR2F6 | Hep-G2 | 95004333 | 95004614 |
| chr9 | 95004954 | 95008476 | NR2F6 | Hep-G2 | 95005750 | 95005901 |
| chr9 | 94991008 | 94991685 | NR3C1 | A-549 | 94991357 | 94991488 |
| chr9 | 95003886 | 95004722 | NR3C1 | A-549 | 95004169 | 95004304 |
| chr9 | 95003886 | 95004722 | NR3C1 | Ishikawa,BEAS-2B | 95004266 | 95004685 |
| chr9 | 95003886 | 95004722 | NR3C1 | A-549 | 95004573 | 95004695 |
| chr9 | 95004954 | 95008476 | NR3C1 | A-549 | 95005001 | 95005482 |
| chr9 | 95004954 | 95008476 | NR3C1 | SUM159PT,HeLa-B2,BEAS-2B,IMR-90 | 95006266 | 95006592 |
| chr9 | 95004954 | 95008476 | NR3C1 | BEAS-2B | 95007129 | 95007333 |
| chr9 | 95004954 | 95008476 | NR3C1 | HeLa-B2 | 95007642 | 95007754 |
| chr9 | 95004954 | 95008476 | NR5A1 | Hep-G2 | 95008203 | 95008383 |
| chr9 | 94991008 | 94991685 | NR5A2 | A-549 | 94991048 | 94991268 |
| chr9 | 95003886 | 95004722 | NR5A2 | A-549 | 95004199 | 95004572 |
| chr9 | 95003886 | 95004722 | NRF1 | HeLa-S3 | 95003981 | 95004488 |
| chr9 | 95003886 | 95004722 | NRF1 | HMEC-1 | 95004556 | 95004671 |
| chr9 | 95004954 | 95008476 | NRF1 | HMEC-1,K-562,HCC1954 | 95005007 | 95005372 |
| chr9 | 95004954 | 95008476 | NRF1 | HeLa-S3 | 95005560 | 95006841 |
| chr9 | 95004954 | 95008476 | NRF1 | HeLa-S3 | 95007423 | 95007692 |
| chr9 | 95003886 | 95004722 | NRIP1 | MCF-7 | 95004066 | 95004278 |
| chr9 | 95004954 | 95008476 | NRL | retina | 95005084 | 95005412 |
| chr9 | 95003886 | 95004722 | OLIG2 | brain-prefrontal-cortex | 95004286 | 95004649 |
| chr9 | 95004954 | 95008476 | OLIG2 | brain-prefrontal-cortex | 95004987 | 95005542 |
| chr9 | 95003886 | 95004722 | ONECUT1 | Hep-G2 | 95004465 | 95004671 |
| chr9 | 95004954 | 95008476 | ONECUT1 | Hep-G2 | 95008191 | 95008421 |
| chr9 | 94992057 | 94993160 | ONECUT2 | Hep-G2 | 94992312 | 94992432 |
| chr9 | 95003886 | 95004722 | ONECUT2 | Hep-G2 | 95004417 | 95004544 |
| chr9 | 95004954 | 95008476 | ONECUT2 | Hep-G2 | 95008275 | 95008466 |
| chr9 | 95004954 | 95008476 | OTX2 | retina | 95006240 | 95006497 |
| chr9 | 95004954 | 95008476 | OVOL1 | MCF-7 | 95006219 | 95006479 |
| chr9 | 95003886 | 95004722 | PARP1 | MCF-10A | 95004255 | 95004577 |
| chr9 | 95003886 | 95004722 | PAX5 | GM12878,GM12892 | 95004510 | 95004684 |
| chr9 | 95004954 | 95008476 | PAX5 | GM12878,GM12892 | 95005070 | 95005426 |
| chr9 | 94992057 | 94993160 | PBX1 | A-549 | 94992061 | 94992565 |
| chr9 | 95003886 | 95004722 | PBX1 | A-549 | 95004148 | 95004606 |
| chr9 | 94992057 | 94993160 | PBX2 | Hep-G2 | 94992137 | 94992335 |
| chr9 | 95004954 | 95008476 | PBX3 | A-549 | 95005511 | 95005644 |
| chr9 | 94991008 | 94991685 | PGR | T-47D | 94991266 | 94991526 |
| chr9 | 95003886 | 95004722 | PGR | myometrium | 95004145 | 95004601 |
| chr9 | 95004954 | 95008476 | PGR | myometrium | 95006288 | 95006486 |
| chr9 | 95004954 | 95008476 | PGR | myometrium | 95006290 | 95006782 |
| chr9 | 95004954 | 95008476 | PGR | AB32 | 95007570 | 95007854 |
| chr9 | 95004954 | 95008476 | PHF19 | DU145 | 95008180 | 95008432 |
| chr9 | 95004954 | 95008476 | PHF5A | Hep-G2 | 95005457 | 95005622 |
| chr9 | 95004954 | 95008476 | PHF5A | Hep-G2 | 95006404 | 95006527 |
| chr9 | 94992057 | 94993160 | PHF8 | Hep-G2 | 94992067 | 94992483 |
| chr9 | 94992057 | 94993160 | PHF8 | A-549 | 94992345 | 94992611 |
| chr9 | 94992057 | 94993160 | PHF8 | Hep-G2 | 94992622 | 94992846 |
| chr9 | 95003886 | 95004722 | PHF8 | K-562,WA01 | 95004244 | 95004620 |
| chr9 | 95004954 | 95008476 | PHF8 | K-562,WA01 | 95005004 | 95005420 |
| chr9 | 95004954 | 95008476 | PHF8 | WA01 | 95005358 | 95005504 |
| chr9 | 95004954 | 95008476 | PHF8 | Hep-G2 | 95006350 | 95006680 |
| chr9 | 95004954 | 95008476 | PHF8 | Hep-G2 | 95008171 | 95008452 |
| chr9 | 95004954 | 95008476 | PITX3 | SH-SY5Y | 95006143 | 95006475 |
| chr9 | 95003886 | 95004722 | PML | MCF-7 | 95004073 | 95004189 |
| chr9 | 95003886 | 95004722 | PML | K-562 | 95004217 | 95004524 |
| chr9 | 95003886 | 95004722 | PML | MCF-7 | 95004414 | 95004641 |
| chr9 | 95004954 | 95008476 | PML | fibroblast | 95005092 | 95005308 |
| chr9 | 94991008 | 94991685 | POU2F1 | T-47D | 94991021 | 94991247 |
| chr9 | 94992057 | 94993160 | POU2F1 | T-47D | 94992621 | 94992834 |
| chr9 | 94993465 | 94994155 | POU2F1 | T-47D | 94993685 | 94994105 |
| chr9 | 95003886 | 95004722 | POU2F1 | T-47D | 95004098 | 95004628 |
| chr9 | 95004954 | 95008476 | POU2F1 | T-47D | 95008140 | 95008374 |
| chr9 | 95004954 | 95008476 | POU2F2 | HNPC | 95006396 | 95006515 |
| chr9 | 95004954 | 95008476 | POU2F3 | NCI-H1048 | 95006407 | 95006628 |
| chr9 | 95004954 | 95008476 | POU2F3 | NCI-H1048 | 95007675 | 95007887 |
| chr9 | 94992057 | 94993160 | POU4F2 | HNPC | 94992652 | 94992798 |
| chr9 | 94992057 | 94993160 | POU5F1 | BG03 | 94992696 | 94992849 |
| chr9 | 95003886 | 95004722 | POU5F1 | HUES-8 | 95004194 | 95004592 |
| chr9 | 95004954 | 95008476 | POU5F1 | WA01 | 95005046 | 95005541 |
| chr9 | 94991008 | 94991685 | PPARG | Hep-G2 | 94991219 | 94991416 |
| chr9 | 94991008 | 94991685 | PPARG | Hep-G2 | 94991543 | 94991668 |
| chr9 | 95004954 | 95008476 | PPARG | ASC,Hep-G2 | 95006444 | 95006704 |
| chr9 | 95004954 | 95008476 | PPARG | Hep-G2 | 95007767 | 95007939 |
| chr9 | 94991008 | 94991685 | PRDM10 | Hep-G2 | 94991100 | 94991230 |
| chr9 | 94991008 | 94991685 | PRDM10 | Hep-G2 | 94991326 | 94991511 |
| chr9 | 94992057 | 94993160 | PRDM10 | Hep-G2 | 94992695 | 94992892 |
| chr9 | 95003886 | 95004722 | PRDM10 | Hep-G2 | 95004138 | 95004714 |
| chr9 | 95004954 | 95008476 | PRDM10 | Hep-G2 | 95005501 | 95005654 |
| chr9 | 95003886 | 95004722 | PRDM1 | A-549 | 95004165 | 95004643 |
| chr9 | 95004954 | 95008476 | PRDM1 | HeLa-S3 | 95005900 | 95006025 |
| chr9 | 95004954 | 95008476 | PRDM1 | A-549 | 95008239 | 95008422 |
| chr9 | 95004954 | 95008476 | PRDM6 | HEK293 | 95005830 | 95006708 |
| chr9 | 95004954 | 95008476 | PRDM6 | HEK293 | 95006680 | 95006861 |
| chr9 | 95003886 | 95004722 | PROX1 | SW480 | 95003999 | 95004084 |
| chr9 | 95004954 | 95008476 | PROX1 | SW480 | 95006471 | 95006561 |
| chr9 | 95003886 | 95004722 | RARA | TSU-1621MT | 95004356 | 95004677 |
| chr9 | 95003886 | 95004722 | RB1 | K-562,GM12878 | 95004356 | 95004655 |
| chr9 | 95004954 | 95008476 | RB1 | K-562,GM12878 | 95005028 | 95005410 |
| chr9 | 95003886 | 95004722 | RBBP4 | SCMC | 95003959 | 95004619 |
| chr9 | 95004954 | 95008476 | RBM14 | K-562 | 95005098 | 95005505 |
| chr9 | 95003886 | 95004722 | RELA | Detroit-562,MCF-7,aortic-endothelial-cell,FaDu | 95004040 | 95004375 |
| chr9 | 95004954 | 95008476 | RELA | 786-M1A,aortic-endothelial-cell,CD4 | 95005202 | 95005402 |
| chr9 | 95004954 | 95008476 | RELA | HeLa-B2,HAEC,aortic-endothelial-cell,SW480 | 95006340 | 95006562 |
| chr9 | 95004954 | 95008476 | RELA | aortic-endothelial-cell | 95007410 | 95007573 |
| chr9 | 95004954 | 95008476 | RELA | HeLa-B2,HAEC,aortic-endothelial-cell | 95007640 | 95007844 |
| chr9 | 95004954 | 95008476 | RELA | 786-O,LNCaP,KB,HAEC,aortic-endothelial-cell | 95008259 | 95008454 |
| chr9 | 95004954 | 95008476 | RELB | L1236 | 95007766 | 95007880 |
| chr9 | 94991008 | 94991685 | REST | A-549,liver | 94991208 | 94991570 |
| chr9 | 94992057 | 94993160 | REST | A-549,Hep-G2,MCF-7,liver | 94992061 | 94992467 |
| chr9 | 94993465 | 94994155 | REST | liver | 94993768 | 94993984 |
| chr9 | 95003886 | 95004722 | REST | K-562 | 95003971 | 95004163 |
| chr9 | 95003886 | 95004722 | REST | liver | 95004148 | 95004304 |
| chr9 | 95003886 | 95004722 | REST | A-549,Hep-G2,neural,K-562 | 95004342 | 95004646 |
| chr9 | 95004954 | 95008476 | REST | colorectal-cancer,K-562 | 95005069 | 95005366 |
| chr9 | 95004954 | 95008476 | REST | A-549,K-562 | 95005393 | 95005676 |
| chr9 | 95004954 | 95008476 | REST | A-549,liver | 95006144 | 95006664 |
| chr9 | 95004954 | 95008476 | REST | A-549,Hep-G2,liver | 95008114 | 95008436 |
| chr9 | 95003886 | 95004722 | RFX3 | Hep-G2 | 95004390 | 95004572 |
| chr9 | 95004954 | 95008476 | RFX3 | Hep-G2 | 95008186 | 95008349 |
| chr9 | 95003886 | 95004722 | RFX5 | MCF-7,IMR-90,Hep-G2,HeLa-S3,WA01,A-549,SK-N-SH,K-562 | 95004066 | 95004401 |
| chr9 | 95003886 | 95004722 | RFX5 | Hep-G2 | 95004437 | 95004657 |
| chr9 | 95004954 | 95008476 | RFX5 | HeLa-S3 | 95006367 | 95006541 |
| chr9 | 95004954 | 95008476 | RFX5 | HeLa-S3 | 95007619 | 95007786 |
| chr9 | 94992057 | 94993160 | RFXAP | Hep-G2 | 94992110 | 94992238 |
| chr9 | 95003886 | 95004722 | RFXAP | Hep-G2 | 95004483 | 95004694 |
| chr9 | 95004954 | 95008476 | RFXAP | Hep-G2 | 95008332 | 95008462 |
| chr9 | 95003886 | 95004722 | RNF2 | ME-1,WA09,GM12878,WA01 | 95004226 | 95004701 |
| chr9 | 95004954 | 95008476 | RUNX1 | VCaP | 95005547 | 95005871 |
| chr9 | 95003886 | 95004722 | RUNX1T1 | Kasumi-1 | 95004387 | 95004684 |
| chr9 | 95004954 | 95008476 | RUNX1T1 | Kasumi-1 | 95005032 | 95005261 |
| chr9 | 95004954 | 95008476 | RUVBL2 | Huh-7,Hep-G2,U2OS | 95005215 | 95005612 |
| chr9 | 95003886 | 95004722 | RXRA | Hep-G2 | 95004396 | 95004622 |
| chr9 | 95004954 | 95008476 | RXRA | SK-N-SH | 95006351 | 95006622 |
| chr9 | 95004954 | 95008476 | RXRA | Hep-G2 | 95008197 | 95008437 |
| chr9 | 95004954 | 95008476 | RYBP | WA01 | 95004984 | 95005603 |
| chr9 | 95004954 | 95008476 | SAFB2 | Hep-G2 | 95008277 | 95008464 |
| chr9 | 95003886 | 95004722 | SALL3 | hiPSC | 95004445 | 95004686 |
| chr9 | 95003886 | 95004722 | SFMBT1 | HeLa | 95004163 | 95004648 |
| chr9 | 95004954 | 95008476 | SFMBT1 | HeLa | 95005553 | 95005812 |
| chr9 | 95004954 | 95008476 | SFMBT1 | 786-O | 95006416 | 95006538 |
| chr9 | 94991008 | 94991685 | SIN3A | A-549 | 94991384 | 94991605 |
| chr9 | 95003886 | 95004722 | SIN3A | SK-N-SH,MCF-7,Hep-G2,A-549,HUVEC-C | 95004099 | 95004566 |
| chr9 | 95004954 | 95008476 | SIN3A | A-549,Hep-G2,SK-N-SH | 95005476 | 95005700 |
| chr9 | 95004954 | 95008476 | SIN3A | A-549 | 95005859 | 95006050 |
| chr9 | 95004954 | 95008476 | SIN3A | A-549,SK-N-SH | 95006138 | 95006781 |
| chr9 | 95004954 | 95008476 | SIN3A | A-549,PANC-1,SK-N-SH | 95007427 | 95007817 |
| chr9 | 95004954 | 95008476 | SIN3A | A-549 | 95007895 | 95008044 |
| chr9 | 95004954 | 95008476 | SIN3A | Hep-G2,SK-N-SH | 95008158 | 95008439 |
| chr9 | 95004954 | 95008476 | SIN3B | K-562,Hep-G2 | 95005029 | 95005372 |
| chr9 | 95004954 | 95008476 | SIN3B | Hep-G2 | 95006407 | 95006605 |
| chr9 | 94991008 | 94991685 | SIX1 | Hep-G2 | 94991257 | 94991414 |
| chr9 | 95003886 | 95004722 | SIX1 | Hep-G2 | 95004405 | 95004673 |
| chr9 | 95004954 | 95008476 | SIX1 | Hep-G2 | 95006365 | 95006752 |
| chr9 | 95004954 | 95008476 | SIX2 | HEK,kidney | 95005819 | 95006016 |
| chr9 | 94991008 | 94991685 | SIX5 | A-549 | 94991315 | 94991530 |
| chr9 | 95003886 | 95004722 | SIX5 | A-549 | 95004205 | 95004441 |
| chr9 | 95004954 | 95008476 | SIX5 | A-549 | 95005966 | 95006216 |
| chr9 | 95004954 | 95008476 | SIX5 | A-549 | 95006326 | 95006477 |
| chr9 | 95004954 | 95008476 | SIX5 | A-549 | 95007472 | 95007693 |
| chr9 | 95003886 | 95004722 | SKI | Hep-G2 | 95004318 | 95004667 |
| chr9 | 95004954 | 95008476 | SKI | Hep-G2 | 95005025 | 95005485 |
| chr9 | 95004954 | 95008476 | SKIL | K-562 | 95005119 | 95005547 |
| chr9 | 94992057 | 94993160 | SMAD1 | Hep-G2 | 94992638 | 94992806 |
| chr9 | 95003886 | 95004722 | SMAD1 | Hep-G2 | 95004218 | 95004722 |
| chr9 | 95004954 | 95008476 | SMAD1 | Hep-G2 | 95005114 | 95005450 |
| chr9 | 95004954 | 95008476 | SMAD1 | Hep-G2 | 95008201 | 95008443 |
| chr9 | 94991008 | 94991685 | SMAD3 | Hep-G2 | 94991267 | 94991538 |
| chr9 | 95004954 | 95008476 | SMAD3 | NCI-H441,Hep-G2 | 95005447 | 95005643 |
| chr9 | 95004954 | 95008476 | SMAD3 | H69 | 95005611 | 95005865 |
| chr9 | 95004954 | 95008476 | SMAD3 | Hep-G2 | 95005832 | 95006056 |
| chr9 | 95004954 | 95008476 | SMAD3 | NCI-H441 | 95006070 | 95006323 |
| chr9 | 95004954 | 95008476 | SMAD3 | H69,HCC1954,NCI-H441,SUM159PT,Hep-G2 | 95006362 | 95006710 |
| chr9 | 95004954 | 95008476 | SMAD3 | H69 | 95007276 | 95007637 |
| chr9 | 95004954 | 95008476 | SMAD3 | NCI-H441,SUM159PT,H69 | 95007808 | 95008049 |
| chr9 | 94992057 | 94993160 | SMAD4 | Hep-G2,Caco-2 | 94992077 | 94992243 |
| chr9 | 95003886 | 95004722 | SMAD4 | Caco-2 | 95004034 | 95004157 |
| chr9 | 95003886 | 95004722 | SMAD4 | Hep-G2 | 95004413 | 95004592 |
| chr9 | 95004954 | 95008476 | SMAD4 | Hep-G2,Caco-2 | 95008245 | 95008474 |
| chr9 | 95004954 | 95008476 | SMAD5 | K-562 | 95005134 | 95005281 |
| chr9 | 95004954 | 95008476 | SMARCA2 | NPC | 95007481 | 95007745 |
| chr9 | 94991008 | 94991685 | SMARCA4 | MCF-7 | 94991050 | 94991641 |
| chr9 | 94991008 | 94991685 | SMARCA4 | A-549 | 94991399 | 94991615 |
| chr9 | 94992057 | 94993160 | SMARCA4 | A-549 | 94992507 | 94993106 |
| chr9 | 95003886 | 95004722 | SMARCA4 | TOV-21G,22Rv1,MCF-10A,NSC,HS-SY-2,MCF-7,SYO-1,NCI-H1703,K-562,BIN-67,J-Lat,Aska-SS,TTC-1240,hiPSC,TTC-549,NGP,A-549 | 95004146 | 95004667 |
| chr9 | 95004954 | 95008476 | SMARCA4 | NPC,TOV-21G,22Rv1,HS-SY-2,MCF-7,SYO-1,NCI-H1703,K-562,BIN-67,Aska-SS,TTC-1240,hiPSC,NGP | 95005077 | 95005590 |
| chr9 | 95004954 | 95008476 | SMARCA4 | NPC,HS-SY-2,MCF-7,BT-16,BIN-67,TTC-1240,NGP,A-549 | 95006265 | 95006611 |
| chr9 | 95004954 | 95008476 | SMARCA4 | MCF-7,NGP,BIN-67 | 95007308 | 95007518 |
| chr9 | 95004954 | 95008476 | SMARCA4 | MCF-7,BIN-67 | 95007624 | 95007909 |
| chr9 | 95003886 | 95004722 | SMARCA5 | GM12878 | 95004358 | 95004607 |
| chr9 | 95004954 | 95008476 | SMARCA5 | GM12878 | 95005039 | 95005566 |
| chr9 | 94992057 | 94993160 | SMARCB1 | Hep-G2 | 94992489 | 94992855 |
| chr9 | 95003886 | 95004722 | SMARCB1 | proliferating-human-fibroblast,HeLa-S3,Hep-G2,MCF-7 | 95004230 | 95004705 |
| chr9 | 95004954 | 95008476 | SMARCB1 | Hep-G2,proliferating-human-fibroblast,MCF-7,hiPSC,HeLa-S3 | 95005093 | 95005542 |
| chr9 | 95004954 | 95008476 | SMARCB1 | Hep-G2 | 95007175 | 95008259 |
| chr9 | 95003886 | 95004722 | SMARCC1 | SYO-1,TTC-549 | 95004011 | 95004398 |
| chr9 | 95004954 | 95008476 | SMARCC1 | Hep-G2 | 95005974 | 95006293 |
| chr9 | 95004954 | 95008476 | SMARCC1 | BIN-67,MCF-7,BT-16 | 95006322 | 95006685 |
| chr9 | 95004954 | 95008476 | SMARCC1 | BIN-67 | 95007198 | 95007497 |
| chr9 | 95004954 | 95008476 | SMARCC1 | BIN-67 | 95007633 | 95007826 |
| chr9 | 95004954 | 95008476 | SMARCC1 | BIN-67 | 95008289 | 95008468 |
| chr9 | 94992057 | 94993160 | SMARCC2 | Hep-G2 | 94992143 | 94992350 |
| chr9 | 95003886 | 95004722 | SMARCD3 | MCF-7 | 95004371 | 95004609 |
| chr9 | 95004954 | 95008476 | SMARCD3 | MCF-7 | 95005192 | 95005468 |
| chr9 | 95004954 | 95008476 | SMARCD3 | MCF-7 | 95006102 | 95006366 |
| chr9 | 95003886 | 95004722 | SMARCE1 | MCF-7 | 95004406 | 95004601 |
| chr9 | 95004954 | 95008476 | SMARCE1 | MCF-7 | 95005021 | 95005521 |
| chr9 | 95003886 | 95004722 | SNAI2 | RD | 95004275 | 95004601 |
| chr9 | 95004954 | 95008476 | SNAI2 | PC-9 | 95005534 | 95006271 |
| chr9 | 94993465 | 94994155 | SOX2 | HNSC | 94993961 | 94994123 |
| chr9 | 95003886 | 95004722 | SOX2 | LK2 | 95003960 | 95004177 |
| chr9 | 95004954 | 95008476 | SOX6 | Hep-G2,K-562 | 95005262 | 95005678 |
| chr9 | 95004954 | 95008476 | SOX6 | Hep-G2 | 95006441 | 95006637 |
| chr9 | 95003886 | 95004722 | SOX8 | RH4 | 95004254 | 95004485 |
| chr9 | 94991008 | 94991685 | SP1 | Hep-G2 | 94991279 | 94991448 |
| chr9 | 94992057 | 94993160 | SP1 | A-549 | 94992637 | 94992788 |
| chr9 | 95003886 | 95004722 | SP1 | A-549,Hep-G2 | 95004044 | 95004694 |
| chr9 | 95003886 | 95004722 | SP1 | Hep-G2 | 95004112 | 95004251 |
| chr9 | 95004954 | 95008476 | SP1 | Hep-G2,HEK293 | 95005052 | 95005201 |
| chr9 | 95004954 | 95008476 | SP1 | Hep-G2 | 95005361 | 95005471 |
| chr9 | 95004954 | 95008476 | SP1 | A-549 | 95005371 | 95005714 |
| chr9 | 95004954 | 95008476 | SP1 | A-549,Hep-G2 | 95006132 | 95006732 |
| chr9 | 95004954 | 95008476 | SP1 | A-549 | 95007200 | 95007985 |
| chr9 | 95003886 | 95004722 | SP2 | HEK293 | 95004098 | 95004468 |
| chr9 | 95003886 | 95004722 | SP2 | HEK293 | 95004424 | 95004648 |
| chr9 | 95003886 | 95004722 | SP3 | HEK293 | 95004068 | 95004604 |
| chr9 | 95003886 | 95004722 | SP4 | HEK293 | 95004059 | 95004589 |
| chr9 | 95003886 | 95004722 | SP7 | HEK293 | 95004147 | 95004656 |
| chr9 | 95004954 | 95008476 | SP7 | HEK293 | 95005526 | 95006450 |
| chr9 | 95003886 | 95004722 | SPDEF | MCF-7 | 95003956 | 95004198 |
| chr9 | 95003886 | 95004722 | SPDEF | MCF-7 | 95004419 | 95004616 |
| chr9 | 95004954 | 95008476 | SPDEF | MCF-7 | 95006184 | 95006468 |
| chr9 | 94992057 | 94993160 | SPI1 | macrophage | 94992674 | 94992885 |
| chr9 | 95003886 | 95004722 | SPI1 | ME-1 | 95004329 | 95004576 |
| chr9 | 95004954 | 95008476 | SPI1 | K-562 | 95005499 | 95005664 |
| chr9 | 95004954 | 95008476 | SPI1 | DC | 95007422 | 95007802 |
| chr9 | 95004954 | 95008476 | SREBF1 | TE-5 | 95006963 | 95007376 |
| chr9 | 94992057 | 94993160 | SRF | GM12878 | 94992687 | 94992798 |
| chr9 | 95004954 | 95008476 | SRF | Ishikawa,HCASMC,Hep-G2 | 95006364 | 95006594 |
| chr9 | 95004954 | 95008476 | SRF | Hep-G2 | 95008267 | 95008430 |
| chr9 | 94992057 | 94993160 | SSRP1 | Hep-G2 | 94992149 | 94992440 |
| chr9 | 95003886 | 95004722 | SSRP1 | Hep-G2 | 95004439 | 95004650 |
| chr9 | 95004954 | 95008476 | SSRP1 | Hep-G2 | 95007592 | 95007902 |
| chr9 | 94992057 | 94993160 | STAT2 | THP-1 | 94992529 | 94992676 |
| chr9 | 95003886 | 95004722 | STAT3 | BT-474,MDA-MB-231,MDA-MB-157,SUM159PT,HCC70 | 95004130 | 95004297 |
| chr9 | 95004954 | 95008476 | STAT3 | HCC1187,MDA-MB-231,monocyte,MCF10A-Er-Src,MDA-MB-157,SUM159PT,MCF-10A,HeLa-S3,HCC70 | 95006322 | 95006544 |
| chr9 | 95004954 | 95008476 | STAT3 | MCF-10A,SUM159PT,HeLa-S3 | 95007635 | 95007801 |
| chr9 | 95004954 | 95008476 | STAT3 | MCF-10A,MDA-MB-231 | 95008224 | 95008438 |
| chr9 | 95004954 | 95008476 | SUPT16H | hiF-T | 95005427 | 95005941 |
| chr9 | 95004954 | 95008476 | SUPT16H | hiF-T | 95006458 | 95007109 |
| chr9 | 95004954 | 95008476 | SUPT16H | hiF-T | 95007534 | 95008074 |
| chr9 | 95003886 | 95004722 | SUPT5H | DLD-1 | 95004124 | 95004290 |
| chr9 | 95003886 | 95004722 | SUPT5H | HCT-116,DLD-1,HeLa | 95004324 | 95004691 |
| chr9 | 95004954 | 95008476 | SUPT5H | HCT-116 | 95006315 | 95006564 |
| chr9 | 95003886 | 95004722 | SUPT6H | HCT-116 | 95004232 | 95004647 |
| chr9 | 95003886 | 95004722 | SUZ12 | NT2-D1,hiPSC | 95004126 | 95004589 |
| chr9 | 95004954 | 95008476 | SUZ12 | hiPSC,WA01 | 95004977 | 95005826 |
| chr9 | 95004954 | 95008476 | SUZ12 | WA01 | 95005492 | 95005637 |
| chr9 | 95003886 | 95004722 | TAF15 | Hep-G2 | 95004338 | 95004668 |
| chr9 | 95004954 | 95008476 | TAF15 | Hep-G2 | 95005270 | 95005450 |
| chr9 | 95003886 | 95004722 | TAF1 | K-562,Ishikawa,HeLa-S3,WA01,A-549,SK-N-SH | 95004056 | 95004508 |
| chr9 | 95003886 | 95004722 | TAF1 | HeLa-S3,Hep-G2,WA01,neural | 95004482 | 95004665 |
| chr9 | 95004954 | 95008476 | TAF1 | K-562,WA01,Hep-G2,SK-N-SH | 95005039 | 95005305 |
| chr9 | 95004954 | 95008476 | TAF1 | HeLa-S3,K-562,A-549,SK-N-SH | 95005430 | 95005802 |
| chr9 | 95004954 | 95008476 | TAF1 | liver,HeLa-S3,A-549,Hep-G2,SK-N-SH | 95006244 | 95006772 |
| chr9 | 95004954 | 95008476 | TAF1 | HeLa-S3 | 95007657 | 95007775 |
| chr9 | 95004954 | 95008476 | TAF1 | SK-N-SH | 95007721 | 95007855 |
| chr9 | 95004954 | 95008476 | TAF1 | Hep-G2,liver | 95008118 | 95008416 |
| chr9 | 95003886 | 95004722 | TARDBP | K-562,GM12878 | 95004424 | 95004657 |
| chr9 | 95004954 | 95008476 | TBL1X | HEK293T | 95005042 | 95005231 |
| chr9 | 95003886 | 95004722 | TBP | HeLa-S3,Hep-G2,K-562 | 95004095 | 95004289 |
| chr9 | 95003886 | 95004722 | TBP | Hep-G2 | 95004490 | 95004626 |
| chr9 | 95004954 | 95008476 | TBP | HeLa-S3 | 95005544 | 95005684 |
| chr9 | 95004954 | 95008476 | TBP | HeLa-S3 | 95006211 | 95006640 |
| chr9 | 95004954 | 95008476 | TBP | HeLa-S3 | 95007592 | 95007843 |
| chr9 | 95004954 | 95008476 | TBP | Hep-G2 | 95008227 | 95008376 |
| chr9 | 95003886 | 95004722 | TBX5 | G296S,cardiomyocyte | 95004186 | 95004560 |
| chr9 | 95004954 | 95008476 | TBX5 | G296S,cardiomyocyte | 95005294 | 95006205 |
| chr9 | 95004954 | 95008476 | TBX5 | cardiomyocyte | 95006523 | 95006816 |
| chr9 | 95004954 | 95008476 | TBX5 | G296S,cardiomyocyte | 95007606 | 95007946 |
| chr9 | 94991008 | 94991685 | TCF12 | A-549 | 94991058 | 94991625 |
| chr9 | 95003886 | 95004722 | TCF12 | GM12878,Ishikawa | 95004296 | 95004618 |
| chr9 | 95004954 | 95008476 | TCF12 | ME-1,GM12878 | 95005123 | 95005366 |
| chr9 | 95004954 | 95008476 | TCF12 | A-549 | 95005391 | 95005706 |
| chr9 | 95004954 | 95008476 | TCF12 | A-549,Ishikawa | 95006112 | 95006699 |
| chr9 | 95003886 | 95004722 | TCF3 | Hep-G2 | 95004485 | 95004635 |
| chr9 | 95004954 | 95008476 | TCF3 | GM12878 | 95005011 | 95005512 |
| chr9 | 95003886 | 95004722 | TCF7 | Hep-G2 | 95004377 | 95004527 |
| chr9 | 95004954 | 95008476 | TCF7 | breast-organoid | 95005080 | 95005474 |
| chr9 | 95004954 | 95008476 | TCF7 | Hep-G2 | 95008213 | 95008452 |
| chr9 | 95003886 | 95004722 | TCF7L2 | HCT-116,HEK293,PANC-1,HeLa-S3,LNCaP,MCF-7 | 95003915 | 95004302 |
| chr9 | 95004954 | 95008476 | TCF7L2 | PANC-1 | 95005108 | 95005565 |
| chr9 | 95004954 | 95008476 | TCF7L2 | Hep-G2,PANC-1 | 95008146 | 95008466 |
| chr9 | 95003886 | 95004722 | TEAD1 | H69 | 95004124 | 95004290 |
| chr9 | 95004954 | 95008476 | TEAD1 | HEK293,keratinocyte,MSTO,H69,HUCCT1,pancreas,adipocyte | 95006284 | 95006588 |
| chr9 | 94993465 | 94994155 | TEAD4 | hMSC-TERT4 | 94993895 | 94994100 |
| chr9 | 95003886 | 95004722 | TEAD4 | PC-9,SK-MEL-147 | 95003889 | 95004210 |
| chr9 | 95003886 | 95004722 | TEAD4 | Ishikawa,hMSC-TERT4 | 95004301 | 95004532 |
| chr9 | 95004954 | 95008476 | TEAD4 | SK-MEL-147 | 95005212 | 95005402 |
| chr9 | 95004954 | 95008476 | TEAD4 | A-549,MDA-MB-231,HUCCT1,MKN28,hMSC-TERT4,PC-9,MCF-7,SNU-216,Hep-G2,SK-MEL-147,BJ,SK-N-SH,Ishikawa | 95006302 | 95006607 |
| chr9 | 95004954 | 95008476 | TEAD4 | Ishikawa | 95008181 | 95008288 |
| chr9 | 95003886 | 95004722 | TFAP2C | MCF-7 | 95004091 | 95004299 |
| chr9 | 95003886 | 95004722 | TFAP2C | UCLA1-hESCs,MCF-7,HCC1954 | 95004350 | 95004646 |
| chr9 | 95004954 | 95008476 | TFAP2C | MCF-7 | 95004987 | 95005145 |
| chr9 | 94992057 | 94993160 | TFAP4 | Hep-G2 | 94992175 | 94992336 |
| chr9 | 95003886 | 95004722 | TFAP4 | Hep-G2 | 95004357 | 95004670 |
| chr9 | 95004954 | 95008476 | TFAP4 | Hep-G2 | 95008218 | 95008423 |
| chr9 | 94992057 | 94993160 | TFDP2 | Hep-G2 | 94992148 | 94992332 |
| chr9 | 95004954 | 95008476 | TFDP2 | Hep-G2 | 95005033 | 95005264 |
| chr9 | 94991008 | 94991685 | TFE3 | Hep-G2 | 94991320 | 94991443 |
| chr9 | 95003886 | 95004722 | TFE3 | Hep-G2 | 95004131 | 95004688 |
| chr9 | 95004954 | 95008476 | TFE3 | Hep-G2 | 95006324 | 95006574 |
| chr9 | 95004954 | 95008476 | TFE3 | Hep-G2 | 95007653 | 95007804 |
| chr9 | 95004954 | 95008476 | TFE3 | Hep-G2 | 95008160 | 95008475 |
| chr9 | 94992057 | 94993160 | TGIF2 | Hep-G2 | 94992119 | 94992325 |
| chr9 | 94991008 | 94991685 | THRB | Hep-G2 | 94991298 | 94991456 |
| chr9 | 95003886 | 95004722 | THRB | Hep-G2 | 95004396 | 95004559 |
| chr9 | 95004954 | 95008476 | THRB | Hep-G2 | 95006203 | 95006784 |
| chr9 | 95004954 | 95008476 | THRB | Hep-G2 | 95008226 | 95008432 |
| chr9 | 95003886 | 95004722 | TP53 | SW480,MDA-MB-231 | 95003899 | 95004418 |
| chr9 | 95003886 | 95004722 | TP53 | GM06170 | 95004151 | 95004523 |
| chr9 | 95003886 | 95004722 | TP53 | SW480,IMR-90 | 95004440 | 95004608 |
| chr9 | 95004954 | 95008476 | TP53 | IMR-90 | 95005039 | 95005670 |
| chr9 | 95004954 | 95008476 | TP53 | IMR-90 | 95005101 | 95005599 |
| chr9 | 95004954 | 95008476 | TP53 | MDA-MB-231 | 95006265 | 95006651 |
| chr9 | 95004954 | 95008476 | TP53 | SW480 | 95007424 | 95007910 |
| chr9 | 95003886 | 95004722 | TRIM28 | AF22,HCT-116 | 95004400 | 95004704 |
| chr9 | 95003886 | 95004722 | TRPS1 | MCF-7 | 95003984 | 95004149 |
| chr9 | 95004954 | 95008476 | TSC22D4 | Hep-G2 | 95008238 | 95008404 |
| chr9 | 95003886 | 95004722 | TSHZ2 | SK-N-SH | 95004368 | 95004588 |
| chr9 | 95004954 | 95008476 | TWIST1 | SHEP-21N | 95006364 | 95006517 |
| chr9 | 95003886 | 95004722 | UBN1 | HeLa | 95004042 | 95004270 |
| chr9 | 95004954 | 95008476 | UBN1 | HeLa | 95005460 | 95005639 |
| chr9 | 95004954 | 95008476 | UBN1 | HeLa | 95006162 | 95006654 |
| chr9 | 95004954 | 95008476 | UBN1 | HeLa | 95007281 | 95007825 |
| chr9 | 95003886 | 95004722 | UBTF | K-562 | 95004118 | 95004294 |
| chr9 | 95003886 | 95004722 | UBTF | K-562 | 95004396 | 95004688 |
| chr9 | 95004954 | 95008476 | UBTF | K-562 | 95005029 | 95005444 |
| chr9 | 95003886 | 95004722 | USF1 | SK-N-SH,Ishikawa,WA01,Hep-G2 | 95004360 | 95004570 |
| chr9 | 95004954 | 95008476 | VDR | THP-1 | 95005116 | 95005319 |
| chr9 | 95004954 | 95008476 | XBP1 | LNCaP | 95006223 | 95006515 |
| chr9 | 94991008 | 94991685 | YY1 | A-549,Hep-G2 | 94991060 | 94991387 |
| chr9 | 94992057 | 94993160 | YY1 | A-549,liver,Hep-G2,Huh-7 | 94992082 | 94992348 |
| chr9 | 94992057 | 94993160 | YY1 | Huh-7,liver | 94992560 | 94992806 |
| chr9 | 95003886 | 95004722 | YY1 | SK-N-SH | 95004011 | 95004193 |
| chr9 | 95003886 | 95004722 | YY1 | HCT-116,WA01 | 95004152 | 95004275 |
| chr9 | 95004954 | 95008476 | YY1 | Huh-7,GM12892,Hep-G2,K-562,HEK293T,GM12891 | 95005123 | 95005499 |
| chr9 | 95004954 | 95008476 | YY1 | A-549,liver,Huh-7,Ishikawa | 95006391 | 95006637 |
| chr9 | 95004954 | 95008476 | YY1 | liver | 95007136 | 95007938 |
| chr9 | 95004954 | 95008476 | YY1 | SK-N-SH | 95007357 | 95007494 |
| chr9 | 95003886 | 95004722 | ZBTB10 | HEK293 | 95004249 | 95004617 |
| chr9 | 95003886 | 95004722 | ZBTB1 | Jurkat | 95004492 | 95004701 |
| chr9 | 95004954 | 95008476 | ZBTB1 | Jurkat | 95004982 | 95005366 |
| chr9 | 95004954 | 95008476 | ZBTB20 | HEK293 | 95005384 | 95005735 |
| chr9 | 95004954 | 95008476 | ZBTB26 | HEK293 | 95005072 | 95005225 |
| chr9 | 95004954 | 95008476 | ZBTB26 | HEK293 | 95005210 | 95005632 |
| chr9 | 94992057 | 94993160 | ZBTB33 | liver | 94992058 | 94992339 |
| chr9 | 95004954 | 95008476 | ZBTB33 | liver | 95006387 | 95006648 |
| chr9 | 95004954 | 95008476 | ZBTB33 | A-549 | 95008193 | 95008411 |
| chr9 | 94993465 | 94994155 | ZBTB40 | K-562,MCF-7 | 94993667 | 94993960 |
| chr9 | 95004954 | 95008476 | ZBTB40 | K-562 | 95005432 | 95005975 |
| chr9 | 94992057 | 94993160 | ZBTB7A | Hep-G2 | 94992238 | 94992406 |
| chr9 | 95003886 | 95004722 | ZBTB7A | Ishikawa,VCaP,Hep-G2,HUDEP-2,K-562 | 95004279 | 95004644 |
| chr9 | 95004954 | 95008476 | ZBTB7A | Ishikawa,VCaP,Hep-G2,HUDEP-2,K-562 | 95005168 | 95005537 |
| chr9 | 95004954 | 95008476 | ZBTB7A | VCaP,Hep-G2 | 95008195 | 95008410 |
| chr9 | 94991008 | 94991685 | ZBTB7B | Hep-G2 | 94991245 | 94991445 |
| chr9 | 95003886 | 95004722 | ZBTB7B | Hep-G2 | 95004104 | 95004709 |
| chr9 | 95004954 | 95008476 | ZBTB7B | Hep-G2 | 95005048 | 95005196 |
| chr9 | 95004954 | 95008476 | ZBTB7B | Hep-G2 | 95005351 | 95005651 |
| chr9 | 95004954 | 95008476 | ZBTB7B | Hep-G2 | 95006336 | 95006612 |
| chr9 | 94992057 | 94993160 | ZFP37 | Hep-G2 | 94992110 | 94992307 |
| chr9 | 94992057 | 94993160 | ZFP64 | Hep-G2 | 94992263 | 94992444 |
| chr9 | 95003886 | 95004722 | ZFP64 | Hep-G2 | 95004131 | 95004251 |
| chr9 | 95003886 | 95004722 | ZFP64 | Hep-G2,HEK293 | 95004246 | 95004706 |
| chr9 | 95004954 | 95008476 | ZFP64 | HEK293 | 95005499 | 95005719 |
| chr9 | 95004954 | 95008476 | ZFP64 | Hep-G2,HEK293 | 95008194 | 95008418 |
| chr9 | 95003886 | 95004722 | ZFX | HCT-116,DAOY,MCF-7,K-562 | 95004098 | 95004582 |
| chr9 | 94992057 | 94993160 | ZFY | Hep-G2 | 94992072 | 94992451 |
| chr9 | 94992057 | 94993160 | ZFY | Hep-G2 | 94992641 | 94992863 |
| chr9 | 95003886 | 95004722 | ZHX1 | HeLa-S3 | 95004074 | 95004344 |
| chr9 | 95004954 | 95008476 | ZHX1 | HeLa-S3 | 95006401 | 95006592 |
| chr9 | 94992057 | 94993160 | ZHX2 | Hep-G2 | 94992081 | 94992249 |
| chr9 | 95003886 | 95004722 | ZHX2 | Hep-G2 | 95004429 | 95004651 |
| chr9 | 95004954 | 95008476 | ZHX2 | Hep-G2 | 95008168 | 95008415 |
| chr9 | 95004954 | 95008476 | ZIC2 | HCT-116 | 95005210 | 95005402 |
| chr9 | 94992057 | 94993160 | ZKSCAN1 | Hep-G2 | 94992060 | 94992250 |
| chr9 | 95004954 | 95008476 | ZKSCAN1 | HeLa-S3,Hep-G2 | 95006410 | 95006582 |
| chr9 | 95004954 | 95008476 | ZMYND11 | HeLa | 95008209 | 95008461 |
| chr9 | 95003886 | 95004722 | ZNF101 | HEK293 | 95003979 | 95004225 |
| chr9 | 95003886 | 95004722 | ZNF10 | HEK293 | 95003973 | 95004582 |
| chr9 | 95003886 | 95004722 | ZNF121 | HEK293,Hep-G2 | 95004471 | 95004667 |
| chr9 | 94992057 | 94993160 | ZNF12 | Hep-G2 | 94992069 | 94992274 |
| chr9 | 95003886 | 95004722 | ZNF12 | K-562 | 95004421 | 95004678 |
| chr9 | 95004954 | 95008476 | ZNF12 | K-562 | 95005121 | 95005547 |
| chr9 | 95004954 | 95008476 | ZNF12 | Hep-G2 | 95006420 | 95006553 |
| chr9 | 95004954 | 95008476 | ZNF12 | Hep-G2 | 95008184 | 95008430 |
| chr9 | 95003886 | 95004722 | ZNF134 | HEK293,K-562 | 95004108 | 95004372 |
| chr9 | 94992057 | 94993160 | ZNF142 | Hep-G2 | 94992077 | 94992371 |
| chr9 | 95003886 | 95004722 | ZNF143 | GM12878,MCF-7,Hep-G2 | 95004138 | 95004706 |
| chr9 | 95004954 | 95008476 | ZNF143 | GM12878,MCF-7 | 95005220 | 95005504 |
| chr9 | 94991008 | 94991685 | ZNF175 | Hep-G2 | 94991283 | 94991459 |
| chr9 | 95003886 | 95004722 | ZNF175 | Hep-G2 | 95004178 | 95004294 |
| chr9 | 95003886 | 95004722 | ZNF175 | Hep-G2 | 95004386 | 95004721 |
| chr9 | 95004954 | 95008476 | ZNF175 | Hep-G2 | 95005477 | 95005594 |
| chr9 | 95004954 | 95008476 | ZNF180 | HEK293T | 95005180 | 95005381 |
| chr9 | 95004954 | 95008476 | ZNF189 | HEK293 | 95006870 | 95007179 |
| chr9 | 95003886 | 95004722 | ZNF18 | GM12878 | 95004157 | 95004520 |
| chr9 | 95004954 | 95008476 | ZNF202 | HEK293T | 95005027 | 95005576 |
| chr9 | 94991008 | 94991685 | ZNF217 | Hep-G2 | 94991084 | 94991441 |
| chr9 | 94992057 | 94993160 | ZNF217 | Hep-G2 | 94992589 | 94992833 |
| chr9 | 95003886 | 95004722 | ZNF217 | MCF-7 | 95004211 | 95004502 |
| chr9 | 95004954 | 95008476 | ZNF217 | GM12878 | 95005139 | 95005522 |
| chr9 | 94992057 | 94993160 | ZNF232 | Hep-G2 | 94992092 | 94992234 |
| chr9 | 95003886 | 95004722 | ZNF232 | Hep-G2 | 95004308 | 95004651 |
| chr9 | 95004954 | 95008476 | ZNF232 | Hep-G2 | 95005043 | 95005184 |
| chr9 | 95004954 | 95008476 | ZNF232 | Hep-G2 | 95005401 | 95005561 |
| chr9 | 95004954 | 95008476 | ZNF24 | MCF-7,K-562 | 95005086 | 95005375 |
| chr9 | 95004954 | 95008476 | ZNF257 | HEK293T | 95005046 | 95005524 |
| chr9 | 95004954 | 95008476 | ZNF257 | HEK293,HEK293T | 95008094 | 95008334 |
| chr9 | 94992057 | 94993160 | ZNF263 | Hep-G2 | 94992097 | 94992429 |
| chr9 | 95003886 | 95004722 | ZNF263 | K-562 | 95004220 | 95004547 |
| chr9 | 95003886 | 95004722 | ZNF263 | Hep-G2 | 95004394 | 95004688 |
| chr9 | 95004954 | 95008476 | ZNF263 | HEK293T,K-562,Hep-G2 | 95005106 | 95005354 |
| chr9 | 94992057 | 94993160 | ZNF264 | Hep-G2 | 94992058 | 94992319 |
| chr9 | 95004954 | 95008476 | ZNF264 | Hep-G2 | 95008195 | 95008450 |
| chr9 | 95004954 | 95008476 | ZNF273 | HEK293T | 95005166 | 95005448 |
| chr9 | 94992057 | 94993160 | ZNF274 | Hep-G2 | 94992671 | 94992825 |
| chr9 | 95004954 | 95008476 | ZNF274 | Hep-G2 | 95005040 | 95005246 |
| chr9 | 94992057 | 94993160 | ZNF276 | Hep-G2 | 94992113 | 94992455 |
| chr9 | 95003886 | 95004722 | ZNF276 | Hep-G2 | 95004372 | 95004686 |
| chr9 | 95004954 | 95008476 | ZNF276 | Hep-G2 | 95005023 | 95005376 |
| chr9 | 95003886 | 95004722 | ZNF2 | HEK293 | 95004091 | 95004575 |
| chr9 | 95004954 | 95008476 | ZNF335 | HEK293 | 95005394 | 95006321 |
| chr9 | 95003886 | 95004722 | ZNF337 | Hep-G2 | 95004462 | 95004642 |
| chr9 | 95003886 | 95004722 | ZNF341 | HEK293 | 95004138 | 95004269 |
| chr9 | 95003886 | 95004722 | ZNF341 | HEK293 | 95004343 | 95004653 |
| chr9 | 95004954 | 95008476 | ZNF366 | HEK293 | 95005786 | 95006358 |
| chr9 | 95004954 | 95008476 | ZNF366 | HEK293 | 95007667 | 95007955 |
| chr9 | 95004954 | 95008476 | ZNF384 | Hep-G2 | 95006688 | 95006887 |
| chr9 | 95003886 | 95004722 | ZNF398 | HEK293 | 95004398 | 95004667 |
| chr9 | 94991008 | 94991685 | ZNF3 | Hep-G2 | 94991203 | 94991421 |
| chr9 | 94992057 | 94993160 | ZNF3 | Hep-G2 | 94992550 | 94992705 |
| chr9 | 95003886 | 95004722 | ZNF3 | K-562,Hep-G2 | 95004331 | 95004658 |
| chr9 | 95004954 | 95008476 | ZNF3 | K-562 | 95005306 | 95005459 |
| chr9 | 95004954 | 95008476 | ZNF3 | Hep-G2 | 95006311 | 95006547 |
| chr9 | 94992057 | 94993160 | ZNF407 | Hep-G2 | 94992075 | 94992269 |
| chr9 | 95004954 | 95008476 | ZNF407 | Hep-G2 | 95005401 | 95005635 |
| chr9 | 95003886 | 95004722 | ZNF44 | Hep-G2 | 95004277 | 95004663 |
| chr9 | 95004954 | 95008476 | ZNF44 | Hep-G2 | 95008147 | 95008474 |
| chr9 | 95003886 | 95004722 | ZNF467 | HEK293 | 95004327 | 95004667 |
| chr9 | 94992057 | 94993160 | ZNF501 | Hep-G2 | 94992099 | 94992828 |
| chr9 | 95003886 | 95004722 | ZNF501 | Hep-G2 | 95004041 | 95004708 |
| chr9 | 95004954 | 95008476 | ZNF501 | Hep-G2 | 95006420 | 95006624 |
| chr9 | 95003886 | 95004722 | ZNF550 | Hep-G2 | 95004373 | 95004678 |
| chr9 | 95004954 | 95008476 | ZNF610 | HEK293T | 95005005 | 95005373 |
| chr9 | 95004954 | 95008476 | ZNF671 | HEK293T | 95005442 | 95005754 |
| chr9 | 95003886 | 95004722 | ZNF76 | HEK293 | 95004298 | 95004649 |