| SE element chr | SE element start | SE element start | TF | TF biosample name | TF end | TF start |
|---|---|---|---|---|---|---|
| chr9 | 94860050 | 94862856 | AFF1 | SEM | 94860742 | 94861112 |
| chr9 | 94860050 | 94862856 | AFF4 | HeLa | 94861996 | 94862187 |
| chr9 | 94866767 | 94869316 | AFF4 | HeLa | 94867296 | 94867503 |
| chr9 | 94866767 | 94869316 | AFF4 | HeLa | 94867647 | 94867882 |
| chr9 | 94866767 | 94869316 | AFF4 | HeLa | 94867938 | 94868220 |
| chr9 | 94860050 | 94862856 | AHR | GM01310 | 94861056 | 94861356 |
| chr9 | 94866767 | 94869316 | AHR | MCF-7 | 94867299 | 94867514 |
| chr9 | 94860050 | 94862856 | AR | prostate | 94860386 | 94860681 |
| chr9 | 94860050 | 94862856 | AR | PC-3,prostate | 94861637 | 94861968 |
| chr9 | 94860050 | 94862856 | AR | prostate | 94861906 | 94862158 |
| chr9 | 94860050 | 94862856 | AR | LNCaP | 94862105 | 94862245 |
| chr9 | 94860050 | 94862856 | AR | prostate,LNCaP | 94862582 | 94862790 |
| chr9 | 94864731 | 94866443 | AR | prostate,prostate-cancer | 94866053 | 94866247 |
| chr9 | 94866767 | 94869316 | AR | breast-cancer | 94866836 | 94867065 |
| chr9 | 94866767 | 94869316 | AR | prostate,breast,MCF-7,VCaP,LNCaP,LNCaP-clone-FGC,prostate-cancer | 94867279 | 94867511 |
| chr9 | 94866767 | 94869316 | AR | THP-1,fibroblast,prostate,LNCaP | 94867939 | 94868196 |
| chr9 | 94866767 | 94869316 | AR | prostate | 94868147 | 94868444 |
| chr9 | 94860050 | 94862856 | ARID1A | endometrial-epithelial-cells | 94860656 | 94861566 |
| chr9 | 94860050 | 94862856 | ARID1A | RMG-I,12Z | 94861649 | 94862184 |
| chr9 | 94864731 | 94866443 | ARID1A | endometrial-epithelial-cells,12Z,HAP1 | 94865586 | 94866051 |
| chr9 | 94866767 | 94869316 | ARID1A | RMG-I,endometrial-epithelial-cells,NGP,MCF-7 | 94867142 | 94867722 |
| chr9 | 94866767 | 94869316 | ARID1A | RMG-I,endometrial-epithelial-cells | 94867962 | 94868381 |
| chr9 | 94866767 | 94869316 | ARID1A | 12Z | 94868806 | 94868964 |
| chr9 | 94866767 | 94869316 | ARID1B | K-562 | 94867167 | 94867629 |
| chr9 | 94860050 | 94862856 | ARID3A | GM12878 | 94860972 | 94861608 |
| chr9 | 94860050 | 94862856 | ARID3A | Hep-G2 | 94861420 | 94861548 |
| chr9 | 94866767 | 94869316 | ARID3A | Hep-G2 | 94867255 | 94867556 |
| chr9 | 94866767 | 94869316 | ARID4A | Hep-G2 | 94867321 | 94867499 |
| chr9 | 94866767 | 94869316 | ARID4B | PC-3 | 94867962 | 94868259 |
| chr9 | 94860050 | 94862856 | ARID5B | Jurkat | 94861128 | 94861342 |
| chr9 | 94860050 | 94862856 | ARNT | GM12878 | 94860952 | 94861429 |
| chr9 | 94866767 | 94869316 | ARNT | A-549,K-562,RCC10,MCF-7,RCC4 | 94867232 | 94867566 |
| chr9 | 94860050 | 94862856 | ARNTL | U2OS | 94861003 | 94861327 |
| chr9 | 94866767 | 94869316 | ARNTL | U2OS | 94867191 | 94867502 |
| chr9 | 94860050 | 94862856 | ASCL1 | NCI-H889,SCLC | 94861074 | 94861336 |
| chr9 | 94860050 | 94862856 | ASCL1 | NCI-H889,SCLC | 94861515 | 94861650 |
| chr9 | 94860050 | 94862856 | ASH2L | GM12878 | 94860516 | 94861992 |
| chr9 | 94866767 | 94869316 | ASH2L | VCaP,Hep-G2 | 94867241 | 94867657 |
| chr9 | 94866767 | 94869316 | ATF1 | K-562 | 94867192 | 94867668 |
| chr9 | 94860050 | 94862856 | ATF2 | GM12878 | 94860953 | 94861351 |
| chr9 | 94860050 | 94862856 | ATF3 | liver | 94861346 | 94861617 |
| chr9 | 94860050 | 94862856 | ATF3 | liver | 94861890 | 94862190 |
| chr9 | 94866767 | 94869316 | ATF3 | K-562,liver,HCT-116,A-549,Hep-G2 | 94867270 | 94867529 |
| chr9 | 94866767 | 94869316 | ATF3 | primary-dermal-fibroblasts,A-549,HCT-116 | 94867991 | 94868220 |
| chr9 | 94860050 | 94862856 | ATF4 | Jurkat | 94861134 | 94861354 |
| chr9 | 94860050 | 94862856 | ATF7 | GM12878 | 94860802 | 94861597 |
| chr9 | 94866767 | 94869316 | ATF7 | K-562 | 94867271 | 94867584 |
| chr9 | 94864731 | 94866443 | ATRX | metastatic-neuroblastoma | 94865996 | 94866196 |
| chr9 | 94866767 | 94869316 | ATRX | metastatic-neuroblastoma | 94867001 | 94867646 |
| chr9 | 94860050 | 94862856 | BACH1 | GM12878 | 94861020 | 94861343 |
| chr9 | 94866767 | 94869316 | BACH1 | Hep-G2,AsPC-1,SW1990 | 94867265 | 94867498 |
| chr9 | 94860050 | 94862856 | BACH2 | DOHH2,B-cell,OCI-Ly7 | 94860968 | 94861534 |
| chr9 | 94860050 | 94862856 | BCL11A | CD34,GM12878 | 94860967 | 94861340 |
| chr9 | 94866767 | 94869316 | BCL11A | HUDEP-2 | 94867330 | 94867398 |
| chr9 | 94860050 | 94862856 | BCL11B | thymus | 94860794 | 94860935 |
| chr9 | 94860050 | 94862856 | BCL11B | PBMC,thymus | 94860955 | 94861458 |
| chr9 | 94866767 | 94869316 | BCL3 | A-549 | 94867124 | 94867706 |
| chr9 | 94866767 | 94869316 | BCL3 | A-549 | 94867744 | 94868394 |
| chr9 | 94860050 | 94862856 | BCL6 | RS4-11,OCI-Ly1,CD4,SU-DHL-4,B-cell,OCI-Ly7 | 94860966 | 94861378 |
| chr9 | 94860050 | 94862856 | BCOR | B-cell | 94860847 | 94861378 |
| chr9 | 94860050 | 94862856 | BRCA1 | SH-EP | 94861125 | 94861278 |
| chr9 | 94864731 | 94866443 | BRCA1 | SH-EP | 94866109 | 94866203 |
| chr9 | 94866767 | 94869316 | BRCA1 | HeLa-S3 | 94867289 | 94867438 |
| chr9 | 94866767 | 94869316 | BRCA1 | HeLa-S3 | 94868031 | 94868218 |
| chr9 | 94860050 | 94862856 | CASZ1 | rhabdomyosarcoma | 94860963 | 94861299 |
| chr9 | 94864731 | 94866443 | CASZ1 | rhabdomyosarcoma | 94866048 | 94866251 |
| chr9 | 94866767 | 94869316 | CASZ1 | rhabdomyosarcoma | 94867213 | 94867548 |
| chr9 | 94866767 | 94869316 | CASZ1 | rhabdomyosarcoma | 94868152 | 94868484 |
| chr9 | 94866767 | 94869316 | CASZ1 | rhabdomyosarcoma | 94868388 | 94868724 |
| chr9 | 94860050 | 94862856 | CBFA2T3 | U-937,Kasumi-1 | 94861074 | 94861300 |
| chr9 | 94860050 | 94862856 | CBFB | SaOS-2,GM12878 | 94860864 | 94861398 |
| chr9 | 94866767 | 94869316 | CBFB | Hep-G2 | 94867297 | 94867528 |
| chr9 | 94866767 | 94869316 | CBX3 | HCT-116 | 94867322 | 94867454 |
| chr9 | 94860050 | 94862856 | CDX2 | Caco-2 | 94862043 | 94862171 |
| chr9 | 94866767 | 94869316 | CDX2 | Caco-2 | 94867281 | 94867446 |
| chr9 | 94860050 | 94862856 | CEBPA | Kasumi-1,SKH1,MV4-11,THP-1 | 94861098 | 94861405 |
| chr9 | 94860050 | 94862856 | CEBPA | liver | 94861389 | 94861623 |
| chr9 | 94860050 | 94862856 | CEBPA | Kasumi-1,Hep-G2,liver,T-47D,THP-1 | 94861958 | 94862213 |
| chr9 | 94866767 | 94869316 | CEBPA | Hep-G2,liver,T-47D | 94867264 | 94867515 |
| chr9 | 94860050 | 94862856 | CEBPB | MV4-11 | 94861069 | 94861368 |
| chr9 | 94860050 | 94862856 | CEBPB | MV4-11,HL-60,MCF-7,THP-1,Hep-G2 | 94861417 | 94861608 |
| chr9 | 94860050 | 94862856 | CEBPB | K-562,HFOB,hMSC,MCF-7,A-549 | 94861917 | 94862236 |
| chr9 | 94864731 | 94866443 | CEBPB | A-549 | 94866185 | 94866407 |
| chr9 | 94866767 | 94869316 | CEBPB | K-562,HFOB,MV4-11,HCT-116,Ishikawa,MCF-7,A-549,Hep-G2 | 94867266 | 94867521 |
| chr9 | 94866767 | 94869316 | CEBPB | A-549 | 94867869 | 94868270 |
| chr9 | 94860050 | 94862856 | CEBPD | HAEC | 94861943 | 94862168 |
| chr9 | 94866767 | 94869316 | CEBPD | Hep-G2 | 94867314 | 94867471 |
| chr9 | 94860050 | 94862856 | CEBPG | K-562 | 94861890 | 94862173 |
| chr9 | 94866767 | 94869316 | CEBPG | K-562 | 94867197 | 94867536 |
| chr9 | 94864731 | 94866443 | CHD1 | IMR-90 | 94866085 | 94866241 |
| chr9 | 94866767 | 94869316 | CHD1 | IMR-90,A-549 | 94867240 | 94867466 |
| chr9 | 94866767 | 94869316 | CHD1 | A-549 | 94867769 | 94867928 |
| chr9 | 94866767 | 94869316 | CHD1 | A-549 | 94868306 | 94868482 |
| chr9 | 94860050 | 94862856 | CHD2 | GM12878 | 94861060 | 94861285 |
| chr9 | 94866767 | 94869316 | CHD2 | SK-N-SH | 94866887 | 94867119 |
| chr9 | 94866767 | 94869316 | CHD2 | HeLa-S3,SK-N-SH | 94867266 | 94867499 |
| chr9 | 94866767 | 94869316 | CHD2 | HeLa-S3 | 94868000 | 94868228 |
| chr9 | 94860050 | 94862856 | CHD4 | SCMC,pre-B-cell | 94860828 | 94861177 |
| chr9 | 94864731 | 94866443 | CHD4 | SCMC,RH5 | 94865702 | 94866111 |
| chr9 | 94866767 | 94869316 | CHD4 | SCMC | 94867217 | 94867426 |
| chr9 | 94864731 | 94866443 | CHD7 | hiPSC | 94865584 | 94866242 |
| chr9 | 94866767 | 94869316 | CHD7 | hiPSC | 94867286 | 94867489 |
| chr9 | 94866767 | 94869316 | CHD7 | hiPSC | 94867833 | 94868272 |
| chr9 | 94860050 | 94862856 | CHD8 | T-47D | 94862494 | 94862651 |
| chr9 | 94866767 | 94869316 | CLOCK | MCF-7 | 94867194 | 94867669 |
| chr9 | 94860050 | 94862856 | CREB1 | GM12878,A-549 | 94861042 | 94861264 |
| chr9 | 94866767 | 94869316 | CREB1 | A-549,MCF-7,Hep-G2,MDA-MB-134-VI,LNCaP-abl | 94867270 | 94867524 |
| chr9 | 94866767 | 94869316 | CREB5 | SK-N-SH | 94866890 | 94867546 |
| chr9 | 94866767 | 94869316 | CREB5 | LNCaP | 94867068 | 94867518 |
| chr9 | 94860050 | 94862856 | CREBBP | fibroblast | 94860903 | 94861344 |
| chr9 | 94860050 | 94862856 | CREBBP | fibroblast | 94861951 | 94862202 |
| chr9 | 94864731 | 94866443 | CREBBP | fibroblast | 94865672 | 94865972 |
| chr9 | 94864731 | 94866443 | CREBBP | retina | 94866091 | 94866318 |
| chr9 | 94866767 | 94869316 | CREBBP | MCF-7,fibroblast | 94867282 | 94867504 |
| chr9 | 94866767 | 94869316 | CREBBP | PC-3 | 94867615 | 94867763 |
| chr9 | 94866767 | 94869316 | CREBBP | fibroblast | 94867878 | 94868216 |
| chr9 | 94866767 | 94869316 | CREBBP | PC-3 | 94868340 | 94868538 |
| chr9 | 94866767 | 94869316 | CREBBP | PC-3 | 94868617 | 94868736 |
| chr9 | 94860050 | 94862856 | CREM | GM12878,K-562 | 94861049 | 94861282 |
| chr9 | 94866767 | 94869316 | CREM | K-562,Hep-G2 | 94867252 | 94867588 |
| chr9 | 94866767 | 94869316 | CTBP1 | K-562 | 94868115 | 94868375 |
| chr9 | 94860050 | 94862856 | CTCF | THP-1 | 94860475 | 94860693 |
| chr9 | 94860050 | 94862856 | CTCF | RH4,SUM159 | 94861058 | 94861305 |
| chr9 | 94860050 | 94862856 | CTCF | islet,RH4,hepatocyte | 94861445 | 94861668 |
| chr9 | 94860050 | 94862856 | CTCF | hepatocyte,fibroblast | 94861835 | 94861972 |
| chr9 | 94860050 | 94862856 | CTCF | GM12867 | 94862527 | 94862625 |
| chr9 | 94864731 | 94866443 | CTCF | HAP1 | 94865496 | 94866130 |
| chr9 | 94864731 | 94866443 | CTCF | gastroesophageal-sphincter,RH4,retina | 94866120 | 94866420 |
| chr9 | 94866767 | 94869316 | CTCF | heart,skin,breast,SUM159 | 94867315 | 94867522 |
| chr9 | 94866767 | 94869316 | CTCF | RH4 | 94868157 | 94868305 |
| chr9 | 94866767 | 94869316 | CTCF | GSC23,THP-1 | 94868284 | 94868693 |
| chr9 | 94860050 | 94862856 | CTCFL | FT282 | 94861093 | 94861359 |
| chr9 | 94864731 | 94866443 | CTCFL | FT282 | 94866108 | 94866387 |
| chr9 | 94860050 | 94862856 | DAXX | PC-3 | 94861374 | 94861517 |
| chr9 | 94866767 | 94869316 | DAXX | PC-3 | 94867295 | 94867502 |
| chr9 | 94866767 | 94869316 | DAXX | PC-3 | 94867741 | 94868318 |
| chr9 | 94866767 | 94869316 | DEK | HeLa-S3 | 94867316 | 94867480 |
| chr9 | 94866767 | 94869316 | DEK | HeLa-S3 | 94868150 | 94868268 |
| chr9 | 94866767 | 94869316 | DLX6 | Hep-G2 | 94867344 | 94867467 |
| chr9 | 94866767 | 94869316 | DMAP1 | Hep-G2 | 94867205 | 94867526 |
| chr9 | 94860050 | 94862856 | DPF2 | GM12878 | 94860780 | 94861584 |
| chr9 | 94864731 | 94866443 | DPF2 | BIN-67 | 94865698 | 94866351 |
| chr9 | 94866767 | 94869316 | DRAP1 | Hep-G2 | 94867254 | 94867585 |
| chr9 | 94866767 | 94869316 | DRAP1 | Hep-G2 | 94868046 | 94868411 |
| chr9 | 94860050 | 94862856 | E2F1 | MDA-MB-231 | 94860556 | 94860727 |
| chr9 | 94860050 | 94862856 | E2F1 | MDA-MB-231 | 94860923 | 94861424 |
| chr9 | 94866767 | 94869316 | E2F1 | K-562,MDA-MB-231 | 94867210 | 94867716 |
| chr9 | 94866767 | 94869316 | E2F1 | MDA-MB-231 | 94867866 | 94868391 |
| chr9 | 94864731 | 94866443 | E2F6 | A-549 | 94866109 | 94866232 |
| chr9 | 94860050 | 94862856 | E2F8 | GM12878 | 94860792 | 94861403 |
| chr9 | 94866767 | 94869316 | E4F1 | K-562 | 94867241 | 94867470 |
| chr9 | 94864731 | 94866443 | EBF3 | SK-N-SH | 94866139 | 94866416 |
| chr9 | 94866767 | 94869316 | EBF3 | SK-N-SH | 94866945 | 94867167 |
| chr9 | 94860050 | 94862856 | EGR1 | liver | 94861393 | 94861592 |
| chr9 | 94860050 | 94862856 | EGR1 | liver | 94861942 | 94862219 |
| chr9 | 94866767 | 94869316 | EGR1 | liver,Hep-G2,fibroblast | 94867262 | 94867546 |
| chr9 | 94866767 | 94869316 | EGR1 | Hep-G2 | 94867971 | 94868190 |
| chr9 | 94866767 | 94869316 | EHF | RWPE-1,A-549 | 94867598 | 94868714 |
| chr9 | 94860050 | 94862856 | ELF1 | GM12878 | 94861006 | 94861275 |
| chr9 | 94866767 | 94869316 | ELF1 | Hep-G2,MCF-7,A-549 | 94867299 | 94867456 |
| chr9 | 94866767 | 94869316 | ELF1 | SK-N-MC,A-549 | 94867824 | 94868140 |
| chr9 | 94866767 | 94869316 | ELF3 | PDAC | 94867205 | 94868439 |
| chr9 | 94866767 | 94869316 | ELL2 | HeLa | 94867288 | 94867490 |
| chr9 | 94866767 | 94869316 | ELL2 | HeLa | 94867924 | 94868178 |
| chr9 | 94860050 | 94862856 | EP300 | GM12878,697,fibroblast,AML,Kasumi-1 | 94861005 | 94861337 |
| chr9 | 94860050 | 94862856 | EP300 | fibroblast,HeLa-S3 | 94861919 | 94862185 |
| chr9 | 94864731 | 94866443 | EP300 | fibroblast,A-549,SK-N-SH | 94865643 | 94865989 |
| chr9 | 94866767 | 94869316 | EP300 | SK-N-SH | 94866879 | 94867189 |
| chr9 | 94866767 | 94869316 | EP300 | T-47D,MCF-7,Hep-G2,fibroblast,K-562,HeLa-S3,SK-N-SH | 94867246 | 94867493 |
| chr9 | 94866767 | 94869316 | EP300 | PC-3 | 94867403 | 94867772 |
| chr9 | 94866767 | 94869316 | EP300 | fibroblast,HeLa-S3,SK-N-SH | 94867895 | 94868210 |
| chr9 | 94866767 | 94869316 | EP300 | A-549 | 94868568 | 94868829 |
| chr9 | 94860050 | 94862856 | EPAS1 | PC-3 | 94861146 | 94861383 |
| chr9 | 94860050 | 94862856 | EPAS1 | PC-3 | 94862009 | 94862158 |
| chr9 | 94866767 | 94869316 | EPAS1 | PC-3 | 94867987 | 94868225 |
| chr9 | 94860050 | 94862856 | ERG | Jurkat,ME-1,SEM,SKNO-1,TSU-1621MT | 94861046 | 94861344 |
| chr9 | 94866767 | 94869316 | ERG | VCaP,RWPE-1 | 94867294 | 94867514 |
| chr9 | 94866767 | 94869316 | ERG | VCaP,aortic-endothelial-cell,RWPE-1,HUVEC-C | 94867867 | 94868142 |
| chr9 | 94860050 | 94862856 | ESR1 | MCF-7 | 94861113 | 94861275 |
| chr9 | 94860050 | 94862856 | ESR1 | breast-cancer,MCF-7,breast | 94861393 | 94861624 |
| chr9 | 94860050 | 94862856 | ESR1 | T-47D,breast | 94861709 | 94861999 |
| chr9 | 94864731 | 94866443 | ESR1 | MCF-7,Ishikawa | 94865991 | 94866252 |
| chr9 | 94866767 | 94869316 | ESR1 | primary-breast-cancer,MCF-7,U2OS,breast-cancer,MCF-7-Luc,SUM44PE,MCF-7-Luc-Y537S,primary-endometrium-cancer,breast,ZR751,pleural-effusion,endometrioid-adenocarcinoma,MDA-MB-231,T-47D,MDA-MB-134-VI,Ishikawa | 94867253 | 94867523 |
| chr9 | 94866767 | 94869316 | ESR1 | MCF-7,endometrioid-adenocarcinoma,Ishikawa | 94867696 | 94868043 |
| chr9 | 94866767 | 94869316 | ESR1 | U2OS | 94868126 | 94868325 |
| chr9 | 94866767 | 94869316 | ESR2 | MCF-7,MDA-MB-231 | 94867282 | 94867424 |
| chr9 | 94866767 | 94869316 | ESR2 | MDA-MB-231 | 94868096 | 94868269 |
| chr9 | 94860050 | 94862856 | ESRRA | SK-BR-3 | 94862016 | 94862241 |
| chr9 | 94866767 | 94869316 | ESRRA | K-562,BT-474,SK-BR-3,A-549 | 94867231 | 94867580 |
| chr9 | 94866767 | 94869316 | ESRRA | SK-BR-3 | 94867962 | 94868249 |
| chr9 | 94866767 | 94869316 | ESRRG | cardiomyocyte | 94867098 | 94867862 |
| chr9 | 94860050 | 94862856 | ETS1 | CTV-1,CD4-pos,THP-6,786-O,GM12878 | 94860911 | 94861497 |
| chr9 | 94860050 | 94862856 | ETS1 | 786-O | 94861869 | 94862143 |
| chr9 | 94866767 | 94869316 | ETS1 | A-549,786-O,HUVEC-C,Hep-G2 | 94867353 | 94867560 |
| chr9 | 94866767 | 94869316 | ETS1 | 786-O | 94868076 | 94868268 |
| chr9 | 94860050 | 94862856 | ETV1 | COLO-800 | 94860716 | 94861502 |
| chr9 | 94864731 | 94866443 | ETV1 | GIST-T1 | 94865060 | 94865592 |
| chr9 | 94864731 | 94866443 | ETV1 | GIST-T1 | 94865686 | 94866020 |
| chr9 | 94866767 | 94869316 | ETV1 | GIST-T1 | 94867523 | 94867633 |
| chr9 | 94866767 | 94869316 | ETV1 | GIST-T1,GIST48,COLO-800,GIST | 94867833 | 94868140 |
| chr9 | 94866767 | 94869316 | ETV4 | Hep-G2 | 94867277 | 94867419 |
| chr9 | 94860050 | 94862856 | ETV6 | GM12878 | 94860944 | 94861336 |
| chr9 | 94860050 | 94862856 | EVI1 | SKH1 | 94860905 | 94861486 |
| chr9 | 94860050 | 94862856 | EZH2 | Jurkat | 94860730 | 94860989 |
| chr9 | 94860050 | 94862856 | EZH2 | peripheral-blood-mononuclear-cell,RH30 | 94861020 | 94861586 |
| chr9 | 94860050 | 94862856 | EZH2 | prostate-cancer | 94861429 | 94861633 |
| chr9 | 94860050 | 94862856 | EZH2 | SU-DHL-6 | 94861717 | 94861853 |
| chr9 | 94860050 | 94862856 | EZH2 | GM23248 | 94861970 | 94862194 |
| chr9 | 94860050 | 94862856 | EZH2 | RH30 | 94862442 | 94862698 |
| chr9 | 94864731 | 94866443 | EZH2 | RH30 | 94865990 | 94866250 |
| chr9 | 94866767 | 94869316 | EZH2 | RH30 | 94867238 | 94867519 |
| chr9 | 94866767 | 94869316 | EZH2 | GM23248 | 94867890 | 94868173 |
| chr9 | 94860050 | 94862856 | FLI1 | SEM,SKNO-1,UAE,CTV-1 | 94861021 | 94861356 |
| chr9 | 94866767 | 94869316 | FLI1 | A-673 | 94867868 | 94868111 |
| chr9 | 94866767 | 94869316 | FOSB | A-549 | 94867624 | 94867832 |
| chr9 | 94860050 | 94862856 | FOS | leiomyoma | 94860819 | 94860907 |
| chr9 | 94860050 | 94862856 | FOS | leiomyoma,myometrium,IMR-90,MCF-10A | 94861996 | 94862160 |
| chr9 | 94866767 | 94869316 | FOS | myometrium,MCF-10A,leiomyoma,HeLa-S3,endothelial,MCF-7,IMR-90 | 94867287 | 94867471 |
| chr9 | 94866767 | 94869316 | FOS | CFPAC-1 | 94867575 | 94867883 |
| chr9 | 94866767 | 94869316 | FOS | myometrium,MCF-10A,HeLa-S3,endothelial,MCF-7,IMR-90 | 94867964 | 94868207 |
| chr9 | 94864731 | 94866443 | FOSL1 | BT-549 | 94866089 | 94866326 |
| chr9 | 94866767 | 94869316 | FOSL1 | MDA-MB-231,K-562,BT-549 | 94867276 | 94867477 |
| chr9 | 94866767 | 94869316 | FOSL1 | MDA-MB-231,BT-549,143B,HCT-116 | 94867925 | 94868272 |
| chr9 | 94860050 | 94862856 | FOSL2 | LPS141 | 94861013 | 94861233 |
| chr9 | 94860050 | 94862856 | FOSL2 | hESC,A-549 | 94861971 | 94862184 |
| chr9 | 94864731 | 94866443 | FOSL2 | A-549 | 94866002 | 94866401 |
| chr9 | 94866767 | 94869316 | FOSL2 | MCF-7,Hep-G2 | 94867298 | 94867464 |
| chr9 | 94866767 | 94869316 | FOSL2 | A-549,NPC,hESC,LPS141,SK-N-SH | 94867792 | 94868244 |
| chr9 | 94860050 | 94862856 | FOXA1 | T-47D,ZR-75-1,PDAC,LNCaP-abl,LNCaP,MCF-7,LNCaP-C4-2B,CFPAC-1,NCI-H3122,A-549,liver,breast-cancer | 94861376 | 94861688 |
| chr9 | 94860050 | 94862856 | FOXA1 | liver | 94861849 | 94862172 |
| chr9 | 94866767 | 94869316 | FOXA1 | HEC-1-A,pancreatic-progenitor,LNCaP,breast,primary-breast-cancer,MCF-7-TAMR-1,Ishikawa,CFPAC-1,ZR-75-1,LS180,A-549,22Rv1,primary-prostate-cancer,Huh-7,T-47D,ZR751,LNCaP-abl,LAPC-4,PDAC,DU145,LNCaP-C4-2B,MCF-7,NCI-H3122,liver,breast-cancer,prostate | 94867207 | 94867566 |
| chr9 | 94866767 | 94869316 | FOXA1 | primary-breast-cancer | 94867623 | 94867866 |
| chr9 | 94866767 | 94869316 | FOXA1 | A-549,MCF-7,NCI-H3122 | 94867862 | 94868106 |
| chr9 | 94866767 | 94869316 | FOXA1 | breast-cancer | 94868250 | 94868594 |
| chr9 | 94860050 | 94862856 | FOXA2 | colorectal-cancer,KerCT,liver,CFPAC-1 | 94861336 | 94861712 |
| chr9 | 94860050 | 94862856 | FOXA2 | liver | 94862005 | 94862174 |
| chr9 | 94864731 | 94866443 | FOXA2 | PANC-1 | 94865634 | 94866002 |
| chr9 | 94866767 | 94869316 | FOXA2 | pancreatic-progenitor,PANC-1,KerCT,BJ1-hTERT,Caco-2,CFPAC-1,pancreas,liver | 94867109 | 94867626 |
| chr9 | 94866767 | 94869316 | FOXA2 | BJ1-hTERT | 94867595 | 94867792 |
| chr9 | 94864731 | 94866443 | FOXF1 | GIST-T1 | 94865053 | 94865293 |
| chr9 | 94864731 | 94866443 | FOXF1 | GIST-T1,GIST48 | 94865552 | 94865913 |
| chr9 | 94866767 | 94869316 | FOXF1 | GIST-T1,GIST48 | 94867814 | 94868102 |
| chr9 | 94860050 | 94862856 | FOXF2 | A-549 | 94861812 | 94862118 |
| chr9 | 94866767 | 94869316 | FOXF2 | A-549 | 94867228 | 94867520 |
| chr9 | 94866767 | 94869316 | FOXF2 | A-549 | 94867828 | 94868846 |
| chr9 | 94864731 | 94866443 | FOXL2 | HGrC1 | 94865682 | 94866032 |
| chr9 | 94866767 | 94869316 | FOXL2 | HGrC1,KGN,SVOG-3e | 94867264 | 94867515 |
| chr9 | 94866767 | 94869316 | FOXL2 | HGrC1,KGN,SVOG-3e | 94867746 | 94868413 |
| chr9 | 94860050 | 94862856 | FOXM1 | GM12878 | 94860929 | 94861319 |
| chr9 | 94860050 | 94862856 | FOXP1 | B-cell,SU-DHL-6 | 94861146 | 94861389 |
| chr9 | 94866767 | 94869316 | FOXP1 | Hep-G2 | 94867279 | 94867479 |
| chr9 | 94866767 | 94869316 | FOXP4 | Hep-G2 | 94867277 | 94867509 |
| chr9 | 94860050 | 94862856 | GABPA | GM12878 | 94861152 | 94861272 |
| chr9 | 94866767 | 94869316 | GABPA | A-549 | 94867282 | 94867573 |
| chr9 | 94866767 | 94869316 | GABPA | A-549 | 94867959 | 94868149 |
| chr9 | 94860050 | 94862856 | GATA2 | SKH1 | 94860872 | 94861501 |
| chr9 | 94860050 | 94862856 | GATA2 | CD34 | 94860895 | 94861063 |
| chr9 | 94860050 | 94862856 | GATA2 | ESF,primary-endometrial-stromal-cell,dermal-fibroblast | 94861913 | 94862141 |
| chr9 | 94864731 | 94866443 | GATA2 | SH-SY5Y | 94866156 | 94866406 |
| chr9 | 94866767 | 94869316 | GATA2 | SK-N-SH | 94866944 | 94867137 |
| chr9 | 94866767 | 94869316 | GATA2 | ESF | 94867298 | 94867468 |
| chr9 | 94866767 | 94869316 | GATA2 | dermal-fibroblast | 94867698 | 94867861 |
| chr9 | 94866767 | 94869316 | GATA2 | ESF,primary-endometrial-stromal-cell,endothelial | 94867810 | 94868249 |
| chr9 | 94860050 | 94862856 | GATA3 | Jurkat | 94861021 | 94861357 |
| chr9 | 94866767 | 94869316 | GATA3 | SH-SY5Y,BE2C,SK-N-BE2-C | 94866887 | 94867147 |
| chr9 | 94866767 | 94869316 | GATA3 | breast,A-549,T-47D | 94867230 | 94867785 |
| chr9 | 94860050 | 94862856 | GATA4 | pancreatic-progenitor | 94861432 | 94861679 |
| chr9 | 94866767 | 94869316 | GATA4 | Hep-G2,pancreatic-progenitor,BJ1-hTERT | 94867276 | 94867692 |
| chr9 | 94860050 | 94862856 | GATA6 | OACP4-C | 94861859 | 94862208 |
| chr9 | 94864731 | 94866443 | GATA6 | HUES-8,OACP4-C,AGS | 94865774 | 94865982 |
| chr9 | 94866767 | 94869316 | GATA6 | pancreatic-progenitor,YCC-3,OACP4-C | 94867347 | 94867719 |
| chr9 | 94860050 | 94862856 | GATAD2B | GM12878 | 94860829 | 94861682 |
| chr9 | 94866767 | 94869316 | GFI1B | K-562 | 94867385 | 94867518 |
| chr9 | 94866767 | 94869316 | GLIS1 | HEK293 | 94868515 | 94868717 |
| chr9 | 94866767 | 94869316 | GMEB1 | Hep-G2,K-562 | 94867300 | 94867570 |
| chr9 | 94860050 | 94862856 | GTF2F1 | GM12878 | 94860682 | 94861436 |
| chr9 | 94866767 | 94869316 | GTF2F1 | HeLa-S3 | 94867283 | 94867508 |
| chr9 | 94866767 | 94869316 | GTF2F1 | HeLa-S3 | 94868023 | 94868242 |
| chr9 | 94860050 | 94862856 | HAND2 | SK-N-BE2-C,Kelly | 94862170 | 94862460 |
| chr9 | 94866767 | 94869316 | HAND2 | CLB-Ga | 94866843 | 94867494 |
| chr9 | 94866767 | 94869316 | HBP1 | Hep-G2 | 94867321 | 94867483 |
| chr9 | 94860050 | 94862856 | HDAC1 | NB4 | 94861125 | 94861337 |
| chr9 | 94866767 | 94869316 | HDAC1 | K-562,Hep-G2,MCF-7 | 94867268 | 94867544 |
| chr9 | 94866767 | 94869316 | HDAC1 | MCF-7 | 94867898 | 94868179 |
| chr9 | 94866767 | 94869316 | HDAC1 | PC-3 | 94868641 | 94868799 |
| chr9 | 94860050 | 94862856 | HDAC2 | RH4,pre-B-cell | 94860857 | 94861637 |
| chr9 | 94866767 | 94869316 | HDAC2 | Hep-G2,MCF-7 | 94867300 | 94867523 |
| chr9 | 94866767 | 94869316 | HDAC2 | PC-3 | 94867625 | 94867777 |
| chr9 | 94866767 | 94869316 | HDAC2 | RH4 | 94868086 | 94868290 |
| chr9 | 94866767 | 94869316 | HDAC2 | PC-3 | 94868208 | 94868628 |
| chr9 | 94860050 | 94862856 | HDAC3 | RH4 | 94860917 | 94861600 |
| chr9 | 94866767 | 94869316 | HDGF | K-562 | 94868418 | 94868664 |
| chr9 | 94860050 | 94862856 | HIF1A | PC-3 | 94861005 | 94861504 |
| chr9 | 94860050 | 94862856 | HIF1A | PC-3 | 94862028 | 94862236 |
| chr9 | 94866767 | 94869316 | HIF1A | PC-3,U2OS | 94867289 | 94867483 |
| chr9 | 94866767 | 94869316 | HIF1A | MDA-MB-231,PC-3 | 94867956 | 94868140 |
| chr9 | 94866767 | 94869316 | HIF1A | BEAS-2B,786-O | 94868134 | 94868383 |
| chr9 | 94866767 | 94869316 | HIF3A | Hep-3B2-1-7 | 94868047 | 94868305 |
| chr9 | 94866767 | 94869316 | HLF | Hep-G2 | 94867242 | 94867529 |
| chr9 | 94860050 | 94862856 | HMBOX1 | HeLa | 94861909 | 94862180 |
| chr9 | 94866767 | 94869316 | HMBOX1 | K-562,HeLa | 94867268 | 94867494 |
| chr9 | 94866767 | 94869316 | HMBOX1 | HeLa | 94867862 | 94868277 |
| chr9 | 94866767 | 94869316 | HMGB2 | IMR-90,HUVEC-C | 94867232 | 94867764 |
| chr9 | 94866767 | 94869316 | HMGB2 | IMR-90 | 94868202 | 94868588 |
| chr9 | 94860050 | 94862856 | HNF4A | liver | 94861394 | 94861620 |
| chr9 | 94860050 | 94862856 | HNF4A | liver | 94861871 | 94862185 |
| chr9 | 94866767 | 94869316 | HNF4A | Caco-2,KATO-III,Hep-G2,liver,gastric-epithelial-cell | 94867306 | 94867485 |
| chr9 | 94866767 | 94869316 | HNF4G | Hep-G2 | 94867313 | 94867469 |
| chr9 | 94866767 | 94869316 | HOXA3 | Hep-G2 | 94867277 | 94867518 |
| chr9 | 94860050 | 94862856 | HOXB13 | prostate-cancer | 94860214 | 94860288 |
| chr9 | 94864731 | 94866443 | HOXB13 | G-401 | 94864882 | 94865800 |
| chr9 | 94866767 | 94869316 | HOXB13 | prostate,G-401,A-549 | 94867246 | 94867538 |
| chr9 | 94866767 | 94869316 | HOXB13 | prostate,A-549,LNCaP | 94867789 | 94868141 |
| chr9 | 94866767 | 94869316 | HOXB8 | CFPAC-1 | 94867766 | 94868148 |
| chr9 | 94860050 | 94862856 | HSF1 | MO91 | 94861101 | 94861320 |
| chr9 | 94866767 | 94869316 | HSF1 | BPE | 94867999 | 94868188 |
| chr9 | 94866767 | 94869316 | ILF3 | K-562 | 94867261 | 94867506 |
| chr9 | 94866767 | 94869316 | IRF1 | PDAC | 94867047 | 94868339 |
| chr9 | 94866767 | 94869316 | IRF2 | K-562 | 94867381 | 94867517 |
| chr9 | 94860050 | 94862856 | IRF4 | B-cell,NCI-H929,GM12878,T-cell,OCI-Ly10 | 94861030 | 94861385 |
| chr9 | 94866767 | 94869316 | IRF4 | BC-3 | 94867318 | 94867515 |
| chr9 | 94864731 | 94866443 | ISL1 | SK-N-BE2-C | 94865816 | 94865992 |
| chr9 | 94866767 | 94869316 | ISL2 | Hep-G2 | 94867269 | 94867477 |
| chr9 | 94860050 | 94862856 | JMJD1C | NB4,HL-60,Kasumi-1,THP-1 | 94861092 | 94861340 |
| chr9 | 94860050 | 94862856 | JUNB | GM12878 | 94860856 | 94861533 |
| chr9 | 94860050 | 94862856 | JUNB | Karpas-299,CD4 | 94860912 | 94861694 |
| chr9 | 94860050 | 94862856 | JUNB | MCF10A-Er-Src | 94862014 | 94862165 |
| chr9 | 94860050 | 94862856 | JUNB | Karpas-299 | 94862438 | 94862664 |
| chr9 | 94866767 | 94869316 | JUNB | CFPAC-1 | 94866871 | 94867317 |
| chr9 | 94866767 | 94869316 | JUNB | HAEC | 94867241 | 94867456 |
| chr9 | 94866767 | 94869316 | JUNB | CFPAC-1,Karpas-299,MCF10A-Er-Src,HAEC | 94867973 | 94868287 |
| chr9 | 94860050 | 94862856 | JUND | Kasumi-1 | 94861129 | 94861306 |
| chr9 | 94860050 | 94862856 | JUND | liver | 94861334 | 94861586 |
| chr9 | 94860050 | 94862856 | JUND | liver | 94861862 | 94862272 |
| chr9 | 94866767 | 94869316 | JUND | HeLa-S3,liver | 94866784 | 94866998 |
| chr9 | 94866767 | 94869316 | JUND | A-549,Hep-G2,liver,K-562,HT29,HeLa-S3 | 94867251 | 94867525 |
| chr9 | 94866767 | 94869316 | JUND | liver,HeLa-S3,SK-N-SH,A-549 | 94867980 | 94868209 |
| chr9 | 94860050 | 94862856 | JUN | MDA-MB-231,T-cell,786-O,MDA-BoM-1833 | 94861010 | 94861396 |
| chr9 | 94860050 | 94862856 | JUN | MCF-7 | 94861362 | 94861548 |
| chr9 | 94860050 | 94862856 | JUN | MDA-BoM-1833 | 94861740 | 94861959 |
| chr9 | 94860050 | 94862856 | JUN | HAEC,MCF10A-Er-Src,myometrium,leiomyoma,786-O | 94862000 | 94862152 |
| chr9 | 94864731 | 94866443 | JUN | BT-549 | 94866219 | 94866434 |
| chr9 | 94866767 | 94869316 | JUN | MCF-7,HAEC,HeLa-S3,MCF10A-Er-Src,Hep-G2,BT-549,K-562,leiomyoma,786-O | 94867275 | 94867505 |
| chr9 | 94866767 | 94869316 | JUN | MCF-7,HAEC,HeLa-S3,MCF10A-Er-Src,endothelial,Karpas-299,myometrium,BT-549,primary-lung-fibroblast | 94867916 | 94868224 |
| chr9 | 94860050 | 94862856 | KLF1 | erythroid | 94861185 | 94861255 |
| chr9 | 94864731 | 94866443 | KLF4 | HAP1 | 94865558 | 94865847 |
| chr9 | 94866767 | 94869316 | KLF4 | PDAC | 94867222 | 94867572 |
| chr9 | 94860050 | 94862856 | KLF5 | GM12878 | 94860865 | 94861598 |
| chr9 | 94866767 | 94869316 | KLF6 | Hep-G2 | 94867289 | 94867476 |
| chr9 | 94866767 | 94869316 | KLF6 | PDAC | 94867427 | 94867740 |
| chr9 | 94864731 | 94866443 | KLF9 | GBM1A | 94866236 | 94866322 |
| chr9 | 94860050 | 94862856 | LDB1 | Kasumi-1 | 94860986 | 94861542 |
| chr9 | 94866767 | 94869316 | LHX2 | retina | 94867953 | 94868178 |
| chr9 | 94860050 | 94862856 | LMO1 | Jurkat | 94860994 | 94861396 |
| chr9 | 94860050 | 94862856 | LMO2 | CCRF-CEM | 94860856 | 94861128 |
| chr9 | 94860050 | 94862856 | LMO2 | TSU-1621MT,Kasumi-1 | 94861050 | 94861316 |
| chr9 | 94860050 | 94862856 | LYL1 | NB4,Kasumi-1 | 94861134 | 94861300 |
| chr9 | 94860050 | 94862856 | MAFB | islet | 94861145 | 94861338 |
| chr9 | 94866767 | 94869316 | MAFB | islet | 94867202 | 94867612 |
| chr9 | 94866767 | 94869316 | MAFF | K-562,HeLa-S3 | 94867266 | 94867485 |
| chr9 | 94866767 | 94869316 | MAFF | HeLa-S3 | 94867952 | 94868366 |
| chr9 | 94866767 | 94869316 | MAFG | K-562 | 94867137 | 94867523 |
| chr9 | 94860050 | 94862856 | MAF | CD4,lymphocyte | 94861026 | 94861367 |
| chr9 | 94860050 | 94862856 | MAFK | OCI-Ly7 | 94860872 | 94861637 |
| chr9 | 94866767 | 94869316 | MAFK | HeLa-S3,Hep-G2,K-562 | 94867264 | 94867476 |
| chr9 | 94866767 | 94869316 | MAFK | HeLa-S3 | 94868011 | 94868196 |
| chr9 | 94866767 | 94869316 | MAML1 | SCC | 94867254 | 94867539 |
| chr9 | 94866767 | 94869316 | MAML1 | SCC | 94867934 | 94868248 |
| chr9 | 94866767 | 94869316 | MAML3 | SK-N-SH | 94866882 | 94867167 |
| chr9 | 94860050 | 94862856 | MAX | P493-6 | 94860980 | 94861470 |
| chr9 | 94860050 | 94862856 | MAX | MCF-7,liver | 94861448 | 94861647 |
| chr9 | 94860050 | 94862856 | MAX | liver | 94861945 | 94862243 |
| chr9 | 94864731 | 94866443 | MAX | WA01,SK-N-SH,A-549 | 94866099 | 94866366 |
| chr9 | 94866767 | 94869316 | MAX | A-549,MCF-7,Hep-G2,HeLa-S3,MDA-MB-231,K-562,liver | 94867269 | 94867524 |
| chr9 | 94866767 | 94869316 | MAX | HeLa-S3,SK-N-SH,MDA-MB-231,A-549 | 94867910 | 94868216 |
| chr9 | 94860050 | 94862856 | MAZ | IMR-90 | 94861156 | 94861304 |
| chr9 | 94860050 | 94862856 | MAZ | IMR-90 | 94861969 | 94862098 |
| chr9 | 94866767 | 94869316 | MAZ | IMR-90,K-562 | 94867298 | 94867447 |
| chr9 | 94866767 | 94869316 | MBD1 | Hep-G2 | 94867300 | 94867522 |
| chr9 | 94866767 | 94869316 | MBD2 | MCF-7 | 94867301 | 94867460 |
| chr9 | 94860050 | 94862856 | MED12 | leiomyoma | 94860586 | 94861008 |
| chr9 | 94860050 | 94862856 | MED12 | leiomyoma | 94860852 | 94860925 |
| chr9 | 94860050 | 94862856 | MED12 | leiomyoma | 94861175 | 94861249 |
| chr9 | 94860050 | 94862856 | MED12 | leiomyoma,myometrium | 94862009 | 94862162 |
| chr9 | 94860050 | 94862856 | MED12 | leiomyoma | 94862226 | 94862282 |
| chr9 | 94864731 | 94866443 | MED12 | leiomyoma,myometrium | 94864850 | 94864944 |
| chr9 | 94864731 | 94866443 | MED12 | leiomyoma | 94866135 | 94866193 |
| chr9 | 94866767 | 94869316 | MED12 | leiomyoma,myometrium | 94867317 | 94867454 |
| chr9 | 94866767 | 94869316 | MED12 | leiomyoma | 94867969 | 94868168 |
| chr9 | 94866767 | 94869316 | MED12 | myometrium | 94868019 | 94868228 |
| chr9 | 94866767 | 94869316 | MED12 | leiomyoma | 94868639 | 94868749 |
| chr9 | 94869895 | 94870319 | MED12 | myometrium | 94869897 | 94869957 |
| chr9 | 94860050 | 94862856 | MEF2A | GM12878 | 94860989 | 94861291 |
| chr9 | 94866767 | 94869316 | MEF2A | Hep-G2 | 94867284 | 94867463 |
| chr9 | 94860050 | 94862856 | MEF2B | tonsil,GM12878,DLBCL | 94860891 | 94861439 |
| chr9 | 94864731 | 94866443 | MEF2D | retina | 94866148 | 94866407 |
| chr9 | 94860050 | 94862856 | MEIS1 | SEM | 94861012 | 94861312 |
| chr9 | 94860050 | 94862856 | MLLT1 | MV4-11 | 94861050 | 94861341 |
| chr9 | 94866767 | 94869316 | MLX | Hep-G2 | 94867298 | 94867518 |
| chr9 | 94866767 | 94869316 | MNT | Hep-G2 | 94867361 | 94867560 |
| chr9 | 94860050 | 94862856 | MTA2 | RH4,GM12878,pre-B-cell | 94860744 | 94861633 |
| chr9 | 94864731 | 94866443 | MTA2 | RH4 | 94865585 | 94866422 |
| chr9 | 94866767 | 94869316 | MXD4 | Hep-G2 | 94867265 | 94867594 |
| chr9 | 94864731 | 94866443 | MXI1 | IMR-90,SK-N-SH | 94866071 | 94866358 |
| chr9 | 94866767 | 94869316 | MXI1 | HeLa-S3 | 94867319 | 94867470 |
| chr9 | 94866767 | 94869316 | MXI1 | IMR-90,HeLa-S3 | 94867931 | 94868146 |
| chr9 | 94860050 | 94862856 | MYB | Jurkat,Loucy,MOLT-3,CD4,THP-1,GM12878,PF-382,SEM,DU528 | 94860928 | 94861406 |
| chr9 | 94860050 | 94862856 | MYB | THP-1,MOLT-3 | 94861478 | 94861695 |
| chr9 | 94866767 | 94869316 | MYBL2 | A-673 | 94866810 | 94867033 |
| chr9 | 94866767 | 94869316 | MYBL2 | Hep-G2 | 94867268 | 94867471 |
| chr9 | 94860050 | 94862856 | MYC | Jurkat,MM1-S,U-87MG,CD34,P493-6 | 94861018 | 94861274 |
| chr9 | 94860050 | 94862856 | MYC | U-87MG | 94861507 | 94861688 |
| chr9 | 94860050 | 94862856 | MYC | MCF-10A | 94861974 | 94862192 |
| chr9 | 94864731 | 94866443 | MYC | HeLa,OVCAR-3,SK-N-AS,HFF,SK-N-SH,U-87MG,NB69,HeLa-S3 | 94866018 | 94866332 |
| chr9 | 94866767 | 94869316 | MYC | HeLa-S3,MCF-10A,A-549,K-562 | 94867290 | 94867465 |
| chr9 | 94866767 | 94869316 | MYC | HeLa-S3,MCF-10A | 94867974 | 94868182 |
| chr9 | 94860050 | 94862856 | MYCN | RH4 | 94860654 | 94862079 |
| chr9 | 94860050 | 94862856 | MYCN | SH-EP | 94861153 | 94861278 |
| chr9 | 94860050 | 94862856 | MYCN | RH4,Kelly | 94862281 | 94862660 |
| chr9 | 94864731 | 94866443 | MYCN | MYCN-3 | 94865792 | 94865959 |
| chr9 | 94864731 | 94866443 | MYCN | SK-N-BE2-C,Kelly,CHP-134,prostate-cancer,NGP,BE2C,RH4,COG-N-415,LA-N-5,NB-1643,SHEP-21N,MYCN-3,SH-EP | 94865991 | 94866397 |
| chr9 | 94866767 | 94869316 | MYCN | NB-1643 | 94866946 | 94867216 |
| chr9 | 94866767 | 94869316 | MYCN | Kelly,SK-N-BE2-C,COG-N-415,LA-N-5,SHEP-21N,SH-EP | 94867180 | 94867522 |
| chr9 | 94866767 | 94869316 | MYCN | SH-EP | 94867946 | 94868089 |
| chr9 | 94866767 | 94869316 | MYCN | MYCN-3 | 94868250 | 94868374 |
| chr9 | 94866767 | 94869316 | MYCN | COG-N-415 | 94868474 | 94868755 |
| chr9 | 94866767 | 94869316 | MYCN | MYCN-3 | 94868625 | 94868750 |
| chr9 | 94860050 | 94862856 | MYF5 | Rh18 | 94861144 | 94861355 |
| chr9 | 94866767 | 94869316 | MYF5 | Rh18 | 94868126 | 94868319 |
| chr9 | 94866767 | 94869316 | MYNN | Hep-G2 | 94867342 | 94867485 |
| chr9 | 94860050 | 94862856 | MYOD1 | rhabdomyosarcoma,myoblast,RH30,RD,SMS-CTR,RH4 | 94860950 | 94861582 |
| chr9 | 94860050 | 94862856 | MYOD1 | SMS-CTR,rhabdomyosarcoma | 94861604 | 94861939 |
| chr9 | 94864731 | 94866443 | MYOD1 | RH30,RH4 | 94865949 | 94866298 |
| chr9 | 94866767 | 94869316 | MYOD1 | RH30,RH4 | 94867289 | 94867479 |
| chr9 | 94866767 | 94869316 | MYOD1 | rhabdomyosarcoma,myoblast,RH30,RD,SMS-CTR,RH4 | 94868051 | 94868393 |
| chr9 | 94860050 | 94862856 | MYOG | RH4 | 94860625 | 94860831 |
| chr9 | 94860050 | 94862856 | MYOG | RH4,RH30 | 94861038 | 94861378 |
| chr9 | 94860050 | 94862856 | MYOG | RH4,RH30 | 94861614 | 94861882 |
| chr9 | 94864731 | 94866443 | MYOG | RH4 | 94865943 | 94866373 |
| chr9 | 94864731 | 94866443 | NANOG | hESC | 94865675 | 94865768 |
| chr9 | 94866767 | 94869316 | NANOG | LNCaP | 94867285 | 94867446 |
| chr9 | 94860050 | 94862856 | NCOA1 | MCF-7 | 94862439 | 94862558 |
| chr9 | 94866767 | 94869316 | NCOA2 | MCF-7 | 94867325 | 94867453 |
| chr9 | 94866767 | 94869316 | NCOA3 | MCF-7 | 94867284 | 94867448 |
| chr9 | 94860050 | 94862856 | NCOR1 | OCI-Ly1 | 94860808 | 94861362 |
| chr9 | 94866767 | 94869316 | NCOR1 | K-562,LS180 | 94867270 | 94867491 |
| chr9 | 94860050 | 94862856 | NCOR2 | OCI-Ly1,B-cell,AML | 94860986 | 94861349 |
| chr9 | 94860050 | 94862856 | NEUROD1 | D283-Med | 94861745 | 94862105 |
| chr9 | 94864731 | 94866443 | NEUROD1 | D283-Med | 94865433 | 94865801 |
| chr9 | 94864731 | 94866443 | NEUROD1 | D341-Med | 94865614 | 94866013 |
| chr9 | 94866767 | 94869316 | NEUROD1 | D283-Med,D341-Med | 94866802 | 94867239 |
| chr9 | 94866767 | 94869316 | NEUROD1 | K-562,D341-Med | 94867326 | 94867508 |
| chr9 | 94860050 | 94862856 | NEUROG2 | MRC-5 | 94860986 | 94861331 |
| chr9 | 94864731 | 94866443 | NEUROG2 | MRC-5 | 94865699 | 94866094 |
| chr9 | 94860050 | 94862856 | NFATC1 | GM12878 | 94861028 | 94861240 |
| chr9 | 94860050 | 94862856 | NFATC3 | GM12878 | 94860857 | 94861720 |
| chr9 | 94866767 | 94869316 | NFE2 | K-562,ProEs | 94867271 | 94867487 |
| chr9 | 94860050 | 94862856 | NFE2L2 | IMR-90 | 94861105 | 94861401 |
| chr9 | 94860050 | 94862856 | NFE2L2 | IMR-90 | 94861991 | 94862179 |
| chr9 | 94866767 | 94869316 | NFE2L2 | BEAS-2B,K-562,HeLa-S3,A-549,Hep-G2,IMR-90 | 94867207 | 94867657 |
| chr9 | 94866767 | 94869316 | NFE2L2 | IMR-90 | 94867946 | 94868169 |
| chr9 | 94866767 | 94869316 | NFE2L2 | A-549 | 94868076 | 94868438 |
| chr9 | 94860050 | 94862856 | NFIC | GM12878 | 94860888 | 94861344 |
| chr9 | 94864731 | 94866443 | NFIC | SK-N-SH | 94865764 | 94865954 |
| chr9 | 94864731 | 94866443 | NFIC | SK-N-SH | 94866060 | 94866215 |
| chr9 | 94866767 | 94869316 | NFIC | SK-N-SH | 94867931 | 94868202 |
| chr9 | 94866767 | 94869316 | NFIL3 | Hep-G2 | 94867253 | 94867506 |
| chr9 | 94860050 | 94862856 | NFKB1 | MCF10A-Er-Src | 94861988 | 94862151 |
| chr9 | 94866767 | 94869316 | NFKB1 | MCF10A-Er-Src | 94867973 | 94868219 |
| chr9 | 94866767 | 94869316 | NFKBIZ | Hep-G2 | 94867253 | 94867625 |
| chr9 | 94866767 | 94869316 | NFYC | Hep-G2 | 94867353 | 94867527 |
| chr9 | 94860050 | 94862856 | NKX3-1 | islet | 94861295 | 94861663 |
| chr9 | 94866767 | 94869316 | NKX3-1 | islet | 94867324 | 94867496 |
| chr9 | 94866767 | 94869316 | NR1H2 | HT29 | 94867246 | 94867508 |
| chr9 | 94866767 | 94869316 | NR2C1 | K-562 | 94867317 | 94867506 |
| chr9 | 94866767 | 94869316 | NR2C2 | K-562,Hep-G2 | 94867255 | 94867618 |
| chr9 | 94860050 | 94862856 | NR2F1 | GM12878 | 94860840 | 94861533 |
| chr9 | 94866767 | 94869316 | NR2F1 | K-562 | 94867185 | 94868159 |
| chr9 | 94860050 | 94862856 | NR2F2 | liver | 94861380 | 94861580 |
| chr9 | 94866767 | 94869316 | NR2F2 | Hep-G2,K-562,MCF-7,uterus,liver | 94867264 | 94867521 |
| chr9 | 94866767 | 94869316 | NR2F2 | uterus | 94867856 | 94868192 |
| chr9 | 94866767 | 94869316 | NR2F6 | K-562,Hep-G2 | 94867150 | 94867622 |
| chr9 | 94860050 | 94862856 | NR3C1 | NALM-6,ALL,MDA-MB-231,SUP-B15,GM12878 | 94860929 | 94861418 |
| chr9 | 94860050 | 94862856 | NR3C1 | MCF-7 | 94861475 | 94861645 |
| chr9 | 94860050 | 94862856 | NR3C1 | A-549 | 94861751 | 94861856 |
| chr9 | 94860050 | 94862856 | NR3C1 | SUM159PT,IMR-90 | 94861849 | 94862151 |
| chr9 | 94864731 | 94866443 | NR3C1 | IMR-90 | 94865623 | 94865942 |
| chr9 | 94864731 | 94866443 | NR3C1 | BEAS-2B | 94865966 | 94866229 |
| chr9 | 94866767 | 94869316 | NR3C1 | BEAS-2B,HeLa-B2,Ishikawa,A-549,SUM159PT,MCF-7 | 94867264 | 94867576 |
| chr9 | 94866767 | 94869316 | NR3C1 | BEAS-2B,A-549,IMR-90,MDA-MB-231,SUM159PT | 94867764 | 94868264 |
| chr9 | 94866767 | 94869316 | NR3C1 | BEAS-2B | 94868446 | 94868774 |
| chr9 | 94860050 | 94862856 | NR4A1 | Kasumi-1 | 94861153 | 94861301 |
| chr9 | 94866767 | 94869316 | NR5A1 | Hep-G2 | 94867326 | 94867476 |
| chr9 | 94866767 | 94869316 | NR5A2 | A-549 | 94867075 | 94867677 |
| chr9 | 94866767 | 94869316 | NR5A2 | A-549 | 94868009 | 94868717 |
| chr9 | 94866767 | 94869316 | NRIP1 | MCF-7 | 94867281 | 94867484 |
| chr9 | 94866767 | 94869316 | ONECUT1 | Hep-G2 | 94867284 | 94867470 |
| chr9 | 94866767 | 94869316 | ONECUT2 | A-549 | 94868258 | 94868924 |
| chr9 | 94866767 | 94869316 | OTX2 | retina | 94867843 | 94868132 |
| chr9 | 94866767 | 94869316 | OVOL1 | MCF-7 | 94867290 | 94867487 |
| chr9 | 94860050 | 94862856 | PAX5 | GM12878,GM12891,NALM-6 | 94860832 | 94861422 |
| chr9 | 94860050 | 94862856 | PAX5 | GM12878 | 94861520 | 94861850 |
| chr9 | 94866767 | 94869316 | PAX6 | retina | 94867906 | 94868106 |
| chr9 | 94860050 | 94862856 | PBX1 | RCH-ACV | 94860742 | 94861801 |
| chr9 | 94866767 | 94869316 | PBX2 | Hep-G2 | 94867339 | 94867478 |
| chr9 | 94860050 | 94862856 | PBX3 | GM12878 | 94861032 | 94861310 |
| chr9 | 94866767 | 94869316 | PBX3 | A-549 | 94867274 | 94867506 |
| chr9 | 94866767 | 94869316 | PBX3 | A-549 | 94868074 | 94868259 |
| chr9 | 94860050 | 94862856 | PGR | T-47D,myometrium,AB32 | 94861619 | 94862020 |
| chr9 | 94860050 | 94862856 | PGR | myometrium | 94861700 | 94862304 |
| chr9 | 94866767 | 94869316 | PGR | HUVEC-C,MCF-7,T-47D,AB32,breast | 94867249 | 94867549 |
| chr9 | 94866767 | 94869316 | PGR | T-47D,AB32 | 94868118 | 94868436 |
| chr9 | 94866767 | 94869316 | PHF5A | Hep-G2 | 94867317 | 94867596 |
| chr9 | 94866767 | 94869316 | PHF8 | Hep-G2 | 94867273 | 94867458 |
| chr9 | 94864731 | 94866443 | PHOX2B | SK-N-BE2-C | 94865390 | 94865626 |
| chr9 | 94860050 | 94862856 | PKNOX1 | GM12878 | 94860583 | 94861543 |
| chr9 | 94866767 | 94869316 | PKNOX1 | HEK293T,K-562 | 94867912 | 94868412 |
| chr9 | 94860050 | 94862856 | POU2AF1 | pre-B-cell | 94861045 | 94861307 |
| chr9 | 94860050 | 94862856 | POU2F2 | pre-B-cell,GM12891 | 94860955 | 94861430 |
| chr9 | 94866767 | 94869316 | POU2F3 | NCI-H1048 | 94867374 | 94867578 |
| chr9 | 94864731 | 94866443 | POU3F1 | SKM-1 | 94865434 | 94865896 |
| chr9 | 94864731 | 94866443 | POU3F2 | hiPSC | 94865471 | 94865774 |
| chr9 | 94860050 | 94862856 | POU4F2 | HNPC | 94862505 | 94862657 |
| chr9 | 94864731 | 94866443 | POU5F1 | OSK,hESC,OSKM | 94865636 | 94865956 |
| chr9 | 94866767 | 94869316 | PPARG | Hep-G2,HT29 | 94867281 | 94867516 |
| chr9 | 94866767 | 94869316 | PRDM10 | Hep-G2 | 94867259 | 94867528 |
| chr9 | 94866767 | 94869316 | PRDM10 | Hep-G2 | 94868187 | 94868343 |
| chr9 | 94860050 | 94862856 | PRDM1 | A-549 | 94861840 | 94862275 |
| chr9 | 94864731 | 94866443 | PRDM1 | A-549 | 94866052 | 94866404 |
| chr9 | 94866767 | 94869316 | PRDM1 | A-549 | 94867304 | 94868796 |
| chr9 | 94864731 | 94866443 | PRDM4 | HEK293 | 94865835 | 94866365 |
| chr9 | 94864731 | 94866443 | PRDM6 | HEK293 | 94864826 | 94865390 |
| chr9 | 94860050 | 94862856 | PROX1 | SW480 | 94861144 | 94861270 |
| chr9 | 94866767 | 94869316 | PROX1 | SW480 | 94867328 | 94867439 |
| chr9 | 94864731 | 94866443 | PSIP1 | T-REx-293 | 94865167 | 94865693 |
| chr9 | 94866767 | 94869316 | PSIP1 | T-REx-293 | 94867757 | 94867946 |
| chr9 | 94866767 | 94869316 | PSIP1 | T-REx-293 | 94868609 | 94868783 |
| chr9 | 94860050 | 94862856 | RAD51 | GM12878 | 94860770 | 94861003 |
| chr9 | 94860050 | 94862856 | RARA | TSU-1621MT | 94861045 | 94861307 |
| chr9 | 94866767 | 94869316 | RARA | hiPSC | 94867295 | 94867484 |
| chr9 | 94860050 | 94862856 | RB1 | GM12878 | 94860803 | 94861035 |
| chr9 | 94864731 | 94866443 | RBBP4 | SCMC | 94865609 | 94866080 |
| chr9 | 94864731 | 94866443 | RBBP4 | RH5 | 94865976 | 94866296 |
| chr9 | 94866767 | 94869316 | RBBP4 | SCMC | 94867258 | 94867705 |
| chr9 | 94860050 | 94862856 | RELA | GM19099,SW480,786-O,GM12878,BJAB,GM12891 | 94860909 | 94861304 |
| chr9 | 94860050 | 94862856 | RELA | THP-1 | 94861229 | 94861532 |
| chr9 | 94864731 | 94866443 | RELA | IMR-90 | 94865638 | 94865951 |
| chr9 | 94864731 | 94866443 | RELA | IMR-90,SGBS,aortic-endothelial-cell,FaDu | 94866115 | 94866373 |
| chr9 | 94866767 | 94869316 | RELA | Detroit-562,SW480,786-O,HAEC,FaDu,aortic-endothelial-cell,IMR-90,MCF-7 | 94867258 | 94867524 |
| chr9 | 94866767 | 94869316 | RELA | Detroit-562,SW480,786-O,HAEC,HUVEC-C,FaDu,aortic-endothelial-cell,IMR-90 | 94867890 | 94868239 |
| chr9 | 94860050 | 94862856 | RELB | GM12878 | 94860706 | 94861602 |
| chr9 | 94860050 | 94862856 | REST | liver | 94861449 | 94861710 |
| chr9 | 94860050 | 94862856 | REST | liver | 94861869 | 94862264 |
| chr9 | 94866767 | 94869316 | REST | SK-N-SH | 94866964 | 94867075 |
| chr9 | 94866767 | 94869316 | REST | A-549,Hep-G2,liver | 94867192 | 94867730 |
| chr9 | 94866767 | 94869316 | REST | K-562 | 94868200 | 94868294 |
| chr9 | 94866767 | 94869316 | REST | A-549 | 94868507 | 94868824 |
| chr9 | 94860050 | 94862856 | RFX1 | MCF-7 | 94861331 | 94861761 |
| chr9 | 94860050 | 94862856 | RFX3 | Hep-G2 | 94861459 | 94861642 |
| chr9 | 94866767 | 94869316 | RFX5 | HeLa-S3,Hep-G2 | 94867329 | 94867486 |
| chr9 | 94866767 | 94869316 | RFX5 | HeLa-S3 | 94868042 | 94868208 |
| chr9 | 94860050 | 94862856 | RNF2 | fibroblast,ME-1 | 94860980 | 94861304 |
| chr9 | 94860050 | 94862856 | RUNX1 | HL-60 | 94860872 | 94861046 |
| chr9 | 94860050 | 94862856 | RUNX1 | Kasumi-1,U-937,CD34,BCP-ALL,Jurkat,NB4,AML,epididymis,ME-1,697,ALL-SIL,NALM-6,SKH1,MV4-11,HL-60,THP-1,SKNO-1 | 94860968 | 94861427 |
| chr9 | 94860050 | 94862856 | RUNX1 | CD34 | 94861420 | 94861575 |
| chr9 | 94860050 | 94862856 | RUNX1 | 697 | 94861607 | 94861807 |
| chr9 | 94866767 | 94869316 | RUNX1 | CD34 | 94867277 | 94867493 |
| chr9 | 94866767 | 94869316 | RUNX1 | VCaP | 94867309 | 94867633 |
| chr9 | 94866767 | 94869316 | RUNX1 | VCaP | 94867768 | 94868180 |
| chr9 | 94860050 | 94862856 | RUNX1T1 | Kasumi-1,CD34 | 94860983 | 94861392 |
| chr9 | 94860050 | 94862856 | RUNX1T1 | Kasumi-1 | 94861714 | 94861827 |
| chr9 | 94860050 | 94862856 | RUNX2 | LNCaP-C4-2B,Karpas-45,PER-117,SaOS-2 | 94860920 | 94861393 |
| chr9 | 94866767 | 94869316 | RUVBL2 | U2OS | 94867203 | 94867450 |
| chr9 | 94866767 | 94869316 | RUVBL2 | U2OS | 94868230 | 94868477 |
| chr9 | 94860050 | 94862856 | RXRA | GM12878 | 94861046 | 94861249 |
| chr9 | 94866767 | 94869316 | RXRA | Hep-G2,SK-N-SH | 94867265 | 94867536 |
| chr9 | 94866767 | 94869316 | RXRA | JMSU-1 | 94867863 | 94868242 |
| chr9 | 94866767 | 94869316 | SCRT1 | HEK293 | 94868107 | 94868387 |
| chr9 | 94860050 | 94862856 | SIN3A | HUVEC-C | 94862367 | 94862574 |
| chr9 | 94864731 | 94866443 | SIN3A | SK-N-SH | 94865823 | 94865942 |
| chr9 | 94864731 | 94866443 | SIN3A | SK-N-SH | 94866295 | 94866414 |
| chr9 | 94866767 | 94869316 | SIN3A | A-549 | 94866993 | 94867180 |
| chr9 | 94866767 | 94869316 | SIN3A | A-549,SK-N-SH,MCF-7 | 94867257 | 94867761 |
| chr9 | 94866767 | 94869316 | SIN3A | A-549,SK-N-SH | 94867852 | 94868292 |
| chr9 | 94866767 | 94869316 | SIN3B | Hep-G2 | 94867312 | 94867485 |
| chr9 | 94866767 | 94869316 | SIX1 | Hep-G2 | 94867277 | 94867520 |
| chr9 | 94864731 | 94866443 | SIX2 | HEK,kidney | 94866160 | 94866408 |
| chr9 | 94866767 | 94869316 | SIX2 | kidney | 94867250 | 94867504 |
| chr9 | 94866767 | 94869316 | SIX2 | HEK,kidney | 94867678 | 94868086 |
| chr9 | 94866767 | 94869316 | SIX2 | HEK,kidney | 94868439 | 94868756 |
| chr9 | 94866767 | 94869316 | SIX5 | A-549 | 94867146 | 94867662 |
| chr9 | 94866767 | 94869316 | SIX5 | A-549 | 94868070 | 94868264 |
| chr9 | 94860050 | 94862856 | SKI | HL-60 | 94861178 | 94861309 |
| chr9 | 94866767 | 94869316 | SKI | Hep-G2 | 94867119 | 94867676 |
| chr9 | 94860050 | 94862856 | SKIL | GM12878 | 94860836 | 94861451 |
| chr9 | 94860050 | 94862856 | SMAD1 | GM12878 | 94860885 | 94861365 |
| chr9 | 94860050 | 94862856 | SMAD1 | CD34 | 94861212 | 94861323 |
| chr9 | 94866767 | 94869316 | SMAD1 | K-562,Hep-G2 | 94867331 | 94867503 |
| chr9 | 94860050 | 94862856 | SMAD3 | MDA-MB-231 | 94860944 | 94861208 |
| chr9 | 94860050 | 94862856 | SMAD3 | NCI-H441 | 94861140 | 94861282 |
| chr9 | 94860050 | 94862856 | SMAD3 | HCC1954,NCI-H441,PC-3 | 94861310 | 94861700 |
| chr9 | 94864731 | 94866443 | SMAD3 | H69,LX2 | 94865764 | 94865967 |
| chr9 | 94866767 | 94869316 | SMAD3 | LX2,HMLE,H69,breast-cancer,HCC1954,NCI-H441,Hep-G2 | 94867262 | 94867674 |
| chr9 | 94866767 | 94869316 | SMAD3 | LX2,MDA-MB-231,HMLE,H69,NCI-H441,PC-3 | 94868009 | 94868288 |
| chr9 | 94866767 | 94869316 | SMAD3 | NCI-H441 | 94868646 | 94868894 |
| chr9 | 94864731 | 94866443 | SMAD4 | HGrC1 | 94865746 | 94865968 |
| chr9 | 94866767 | 94869316 | SMAD4 | HGrC1,Hep-G2,Caco-2 | 94867264 | 94867501 |
| chr9 | 94866767 | 94869316 | SMAD4 | HGrC1 | 94868015 | 94868290 |
| chr9 | 94864731 | 94866443 | SMARCA2 | NPC | 94865629 | 94865962 |
| chr9 | 94866767 | 94869316 | SMARCA2 | NPC | 94867145 | 94868169 |
| chr9 | 94866767 | 94869316 | SMARCA2 | NPC | 94867494 | 94868229 |
| chr9 | 94866767 | 94869316 | SMARCA2 | NPC | 94867924 | 94868278 |
| chr9 | 94866767 | 94869316 | SMARCA2 | NPC | 94868339 | 94868827 |
| chr9 | 94860050 | 94862856 | SMARCA4 | SYO-1 | 94860374 | 94860800 |
| chr9 | 94860050 | 94862856 | SMARCA4 | CTV-1 | 94860969 | 94861424 |
| chr9 | 94860050 | 94862856 | SMARCA4 | 501-mel | 94861590 | 94861840 |
| chr9 | 94860050 | 94862856 | SMARCA4 | A-549 | 94862015 | 94862120 |
| chr9 | 94860050 | 94862856 | SMARCA4 | A-549 | 94862123 | 94862176 |
| chr9 | 94864731 | 94866443 | SMARCA4 | BIN-67 | 94864884 | 94865213 |
| chr9 | 94864731 | 94866443 | SMARCA4 | BT-16 | 94865202 | 94865372 |
| chr9 | 94864731 | 94866443 | SMARCA4 | BT-16,Aska-SS,NPC,TTC-549,NGP | 94865567 | 94865888 |
| chr9 | 94866767 | 94869316 | SMARCA4 | NPC,NGP | 94866809 | 94867312 |
| chr9 | 94866767 | 94869316 | SMARCA4 | MCF-7,K-562,BIN-67,TTC-1240,A-549,HeLa-S3 | 94867200 | 94867598 |
| chr9 | 94866767 | 94869316 | SMARCA4 | TOV-21G,SYO-1,501-mel,BIN-67,Aska-SS,NPC,NGP,TTC-1240,A-549 | 94867928 | 94868368 |
| chr9 | 94860050 | 94862856 | SMARCA5 | GM12878 | 94860520 | 94861309 |
| chr9 | 94864731 | 94866443 | SMARCB1 | HeLa-S3 | 94866042 | 94866261 |
| chr9 | 94866767 | 94869316 | SMARCB1 | proliferating-human-fibroblast,HeLa-S3,MCF-7 | 94867221 | 94867736 |
| chr9 | 94866767 | 94869316 | SMARCB1 | Hep-G2 | 94867826 | 94868126 |
| chr9 | 94860050 | 94862856 | SMARCC1 | TTC-549 | 94860598 | 94861194 |
| chr9 | 94860050 | 94862856 | SMARCC1 | TTC-549 | 94861790 | 94862362 |
| chr9 | 94860050 | 94862856 | SMARCC1 | SYO-1 | 94862044 | 94862523 |
| chr9 | 94860050 | 94862856 | SMARCC1 | HeLa-S3,TTC-549 | 94862199 | 94862543 |
| chr9 | 94864731 | 94866443 | SMARCC1 | SK-N-MC,SYO-1,TTC-549 | 94864982 | 94865308 |
| chr9 | 94864731 | 94866443 | SMARCC1 | HeLa-S3,BIN-67,TTC-549,SK-N-MC,SYO-1 | 94865715 | 94866250 |
| chr9 | 94866767 | 94869316 | SMARCC1 | Aska-SS | 94866788 | 94867154 |
| chr9 | 94866767 | 94869316 | SMARCC1 | HeLa-S3,BIN-67,TTC-549,SYO-1,Hep-G2,MCF-7 | 94867250 | 94867536 |
| chr9 | 94866767 | 94869316 | SMARCC1 | BIN-67,SYO-1,TTC-549,Aska-SS | 94867786 | 94868378 |
| chr9 | 94866767 | 94869316 | SMARCC1 | SYO-1 | 94868579 | 94868824 |
| chr9 | 94866767 | 94869316 | SMARCD3 | MCF-7 | 94867255 | 94867500 |
| chr9 | 94860050 | 94862856 | SMARCE1 | HMLE-Twist-ER | 94860944 | 94861258 |
| chr9 | 94866767 | 94869316 | SMARCE1 | MCF-7 | 94867242 | 94867480 |
| chr9 | 94860050 | 94862856 | SNAI2 | RD,SMS-CTR | 94861021 | 94861244 |
| chr9 | 94860050 | 94862856 | SNAI2 | SMS-CTR | 94862274 | 94862468 |
| chr9 | 94860050 | 94862856 | SNAI2 | SMS-CTR | 94862570 | 94862842 |
| chr9 | 94866767 | 94869316 | SNAI2 | SK-N-SH | 94866933 | 94867104 |
| chr9 | 94866767 | 94869316 | SNAI2 | SK-N-SH | 94867972 | 94868307 |
| chr9 | 94860050 | 94862856 | SOX4 | MDA-MB-231 | 94861096 | 94861309 |
| chr9 | 94866767 | 94869316 | SOX4 | MDA-MB-231 | 94868027 | 94868256 |
| chr9 | 94866767 | 94869316 | SOX6 | Hep-G2,K-562 | 94867270 | 94867534 |
| chr9 | 94860050 | 94862856 | SOX8 | RH4 | 94861051 | 94861400 |
| chr9 | 94860050 | 94862856 | SP1 | GM12878 | 94860910 | 94861357 |
| chr9 | 94860050 | 94862856 | SP1 | GM12878 | 94861506 | 94861628 |
| chr9 | 94860050 | 94862856 | SP1 | A-549 | 94861991 | 94862154 |
| chr9 | 94864731 | 94866443 | SP1 | A-549 | 94865741 | 94865956 |
| chr9 | 94864731 | 94866443 | SP1 | A-549 | 94866056 | 94866427 |
| chr9 | 94866767 | 94869316 | SP1 | HCT-116,Hep-G2 | 94867311 | 94867505 |
| chr9 | 94866767 | 94869316 | SP1 | A-549 | 94868546 | 94868787 |
| chr9 | 94864731 | 94866443 | SP7 | HEK293 | 94865657 | 94866442 |
| chr9 | 94866767 | 94869316 | SP7 | HEK293 | 94867852 | 94868237 |
| chr9 | 94864731 | 94866443 | SPDEF | A-549 | 94865767 | 94866173 |
| chr9 | 94866767 | 94869316 | SPDEF | MCF-7 | 94867289 | 94867563 |
| chr9 | 94860050 | 94862856 | SPI1 | GM12891,EM-3,CTV-1,Kasumi-1,NCI-H929 | 94861074 | 94861318 |
| chr9 | 94866767 | 94869316 | SPI1 | GM12891,primary-neutrophil,DC,K-562,CTV-1,monocyte,CD34 | 94868157 | 94868339 |
| chr9 | 94866767 | 94869316 | SPIB | OCI-Ly3 | 94868128 | 94868320 |
| chr9 | 94860050 | 94862856 | SRF | GM12878 | 94861058 | 94861263 |
| chr9 | 94860050 | 94862856 | SRF | GM12878 | 94861490 | 94861757 |
| chr9 | 94866767 | 94869316 | SSRP1 | Hep-G2 | 94867284 | 94867539 |
| chr9 | 94860050 | 94862856 | STAT1 | SET-2 | 94860880 | 94861281 |
| chr9 | 94866767 | 94869316 | STAT1 | HeLa-S3,NCI-H358,FaDu | 94867255 | 94867508 |
| chr9 | 94866767 | 94869316 | STAT1 | FaDu | 94868030 | 94868283 |
| chr9 | 94860050 | 94862856 | STAT3 | A139,MDA-MB-231,B-cell,SU-DHL-2,SUM159PT,A-137 | 94861019 | 94861315 |
| chr9 | 94860050 | 94862856 | STAT3 | MCF-10A,NCI-H358 | 94861382 | 94861592 |
| chr9 | 94860050 | 94862856 | STAT3 | MCF10A-Er-Src,SUM159PT,MCF-10A | 94861930 | 94862150 |
| chr9 | 94866767 | 94869316 | STAT3 | HCC1187,BT-474,MDA-MB-231,FaDu,MDA-MB-468,MDA-MB-157,MCF-7,MCF10A-Er-Src,HeLa-S3,SUM159PT,NCI-H358,MCF-10A,T-47D,HCC1143,HCC70 | 94867198 | 94867569 |
| chr9 | 94866767 | 94869316 | STAT3 | MDA-MB-231,FaDu,MDA-MB-468,MCF10A-Er-Src,MDA-MB-157,MCF-7,SUM159PT,NCI-H358,MCF-10A,HeLa-S3,HCC1143,HCC70 | 94867903 | 94868259 |
| chr9 | 94860050 | 94862856 | STAT5A | MV4-11 | 94861112 | 94861308 |
| chr9 | 94860050 | 94862856 | STAT5B | CD8 | 94860588 | 94860923 |
| chr9 | 94860050 | 94862856 | STAT5B | CD8 | 94861049 | 94861293 |
| chr9 | 94866767 | 94869316 | SUPT5H | HeLa | 94867186 | 94867604 |
| chr9 | 94866767 | 94869316 | SUPT5H | HeLa | 94867780 | 94868002 |
| chr9 | 94866767 | 94869316 | SUPT5H | HeLa | 94868148 | 94868357 |
| chr9 | 94860050 | 94862856 | SUZ12 | ProEs | 94861182 | 94861314 |
| chr9 | 94860050 | 94862856 | TAF1 | GM12878 | 94861144 | 94861301 |
| chr9 | 94864731 | 94866443 | TAF1 | SK-N-SH | 94866336 | 94866442 |
| chr9 | 94866767 | 94869316 | TAF1 | HeLa-S3,A-549,SK-N-SH | 94867283 | 94867531 |
| chr9 | 94866767 | 94869316 | TAF1 | SK-N-SH | 94867863 | 94868016 |
| chr9 | 94866767 | 94869316 | TAF1 | HeLa-S3,A-549,SK-N-SH | 94868031 | 94868297 |
| chr9 | 94860050 | 94862856 | TAL1 | RPMI8402,MOLT-3,CCRF-CEM,CHRF28811 | 94861042 | 94861353 |
| chr9 | 94866767 | 94869316 | TAL1 | PRIMA5 | 94868483 | 94868656 |
| chr9 | 94860050 | 94862856 | TARDBP | GM12878 | 94860785 | 94861469 |
| chr9 | 94866767 | 94869316 | TBP | HeLa-S3,K-562 | 94867265 | 94867513 |
| chr9 | 94866767 | 94869316 | TBP | HeLa-S3 | 94867944 | 94868275 |
| chr9 | 94860050 | 94862856 | TBX21 | Th1,GM12878,CD4 | 94860936 | 94861426 |
| chr9 | 94860050 | 94862856 | TBX2 | Kelly | 94862227 | 94862372 |
| chr9 | 94866767 | 94869316 | TBX2 | SK-N-BE2-C | 94866837 | 94867320 |
| chr9 | 94866767 | 94869316 | TBX2 | Hep-G2 | 94867283 | 94867479 |
| chr9 | 94864731 | 94866443 | TBX5 | G296S | 94865254 | 94865447 |
| chr9 | 94864731 | 94866443 | TBX5 | cardiomyocyte | 94866196 | 94866389 |
| chr9 | 94866767 | 94869316 | TBX5 | G296S,cardiomyocyte,hiPSC | 94867246 | 94867705 |
| chr9 | 94866767 | 94869316 | TBX5 | G296S,cardiomyocyte | 94868103 | 94868602 |
| chr9 | 94866767 | 94869316 | TBX5 | cardiomyocyte | 94868468 | 94868666 |
| chr9 | 94866767 | 94869316 | TBX5 | G296S,cardiomyocyte | 94868678 | 94868858 |
| chr9 | 94860050 | 94862856 | TCF12 | RPMI8402,GM12878,ME-1,Kasumi-1 | 94860995 | 94861424 |
| chr9 | 94860050 | 94862856 | TCF12 | GM12878 | 94861701 | 94861823 |
| chr9 | 94860050 | 94862856 | TCF12 | A-549 | 94861758 | 94862240 |
| chr9 | 94864731 | 94866443 | TCF12 | A-549 | 94865655 | 94865954 |
| chr9 | 94864731 | 94866443 | TCF12 | A-549 | 94866114 | 94866398 |
| chr9 | 94866767 | 94869316 | TCF12 | Hep-G2,Ishikawa | 94867333 | 94867490 |
| chr9 | 94866767 | 94869316 | TCF12 | A-549 | 94868595 | 94868812 |
| chr9 | 94860050 | 94862856 | TCF21 | HCASMC | 94860965 | 94861140 |
| chr9 | 94860050 | 94862856 | TCF3 | RCH-ACV,697,Ramos,GM12878,SEM | 94860827 | 94861513 |
| chr9 | 94860050 | 94862856 | TCF3 | GM12878,Ramos | 94861460 | 94861679 |
| chr9 | 94860050 | 94862856 | TCF4 | GEN2-2,CAL-1 | 94860855 | 94861843 |
| chr9 | 94860050 | 94862856 | TCF7 | GM12878 | 94860969 | 94861192 |
| chr9 | 94860050 | 94862856 | TEAD1 | adipocyte | 94861859 | 94862171 |
| chr9 | 94866767 | 94869316 | TEAD1 | HEK293,MSTO,H69,HUCCT1,pancreas,adipocyte | 94867174 | 94867528 |
| chr9 | 94866767 | 94869316 | TEAD1 | HEK293,keratinocyte,MSTO,HUCCT1,adipocyte | 94867962 | 94868223 |
| chr9 | 94860050 | 94862856 | TEAD4 | SK-MEL-147,hMSC-TERT4 | 94860934 | 94861362 |
| chr9 | 94860050 | 94862856 | TEAD4 | hMSC-TERT4 | 94861700 | 94861921 |
| chr9 | 94864731 | 94866443 | TEAD4 | BJ | 94865711 | 94865983 |
| chr9 | 94866767 | 94869316 | TEAD4 | HUCCT1,MDA-MB-231,A-549,MKN28,hMSC-TERT4,PC-9,MCF-7,SNU-216,Hep-G2,T-47D,HEK293,SK-MEL-147,BJ,SK-N-SH,HCT-116,Ishikawa | 94867193 | 94867524 |
| chr9 | 94866767 | 94869316 | TEAD4 | A-549,SK-N-BE2,MDA-MB-231,SK-MEL-147,BE2C,SK-N-SH | 94867939 | 94868226 |
| chr9 | 94866767 | 94869316 | TFAP2C | HCC1954 | 94867299 | 94867454 |
| chr9 | 94860050 | 94862856 | TFAP4 | Kasumi-1 | 94860906 | 94861460 |
| chr9 | 94866767 | 94869316 | TFDP2 | Hep-G2 | 94867301 | 94867545 |
| chr9 | 94866767 | 94869316 | TFE3 | Hep-G2 | 94867291 | 94867553 |
| chr9 | 94866767 | 94869316 | TGIF2 | Hep-G2 | 94867336 | 94867471 |
| chr9 | 94866767 | 94869316 | THRB | Hep-G2 | 94867234 | 94867637 |
| chr9 | 94860050 | 94862856 | TP53 | SW480,SaOS-2,MDA-MB-231 | 94860997 | 94861427 |
| chr9 | 94860050 | 94862856 | TP53 | SW480 | 94861929 | 94862179 |
| chr9 | 94864731 | 94866443 | TP53 | SW480 | 94865642 | 94865993 |
| chr9 | 94864731 | 94866443 | TP53 | SW480 | 94866181 | 94866441 |
| chr9 | 94866767 | 94869316 | TP53 | SW480,MDA-MB-231,A-549 | 94867214 | 94867582 |
| chr9 | 94866767 | 94869316 | TP53 | SW480,MDA-MB-231 | 94867929 | 94868309 |
| chr9 | 94860050 | 94862856 | TP73 | SaOS-2 | 94860981 | 94861295 |
| chr9 | 94864731 | 94866443 | TP73 | SaOS-2 | 94865764 | 94865975 |
| chr9 | 94860050 | 94862856 | TRIM22 | GM12878 | 94860770 | 94861572 |
| chr9 | 94860050 | 94862856 | TRIM24 | MOLM-13 | 94861014 | 94861332 |
| chr9 | 94866767 | 94869316 | TRPS1 | MCF-7 | 94867257 | 94867594 |
| chr9 | 94864731 | 94866443 | TWIST1 | BE2C,SK-N-BE2-C,SHEP-21N | 94865607 | 94866033 |
| chr9 | 94866767 | 94869316 | UBN1 | HeLa | 94867279 | 94867753 |
| chr9 | 94866767 | 94869316 | UBN1 | HeLa | 94867861 | 94868318 |
| chr9 | 94866767 | 94869316 | UBTF | K-562 | 94867323 | 94867516 |
| chr9 | 94864731 | 94866443 | USF1 | SK-N-SH | 94866079 | 94866192 |
| chr9 | 94866767 | 94869316 | USF1 | A-549 | 94867293 | 94867472 |
| chr9 | 94864731 | 94866443 | USF2 | IMR-90 | 94866094 | 94866267 |
| chr9 | 94866767 | 94869316 | USF2 | HeLa-S3 | 94867295 | 94867457 |
| chr9 | 94866767 | 94869316 | USF2 | HeLa-S3 | 94868156 | 94868340 |
| chr9 | 94860050 | 94862856 | VDR | THP-1 | 94861046 | 94861343 |
| chr9 | 94866767 | 94869316 | VDR | THP-1,LX2 | 94867294 | 94867513 |
| chr9 | 94866767 | 94869316 | VDR | LX2 | 94867904 | 94868276 |
| chr9 | 94866767 | 94869316 | XBP1 | LNCaP | 94867192 | 94867646 |
| chr9 | 94860050 | 94862856 | YY1 | RH4,GM12892,K-562,ALL,GM12891 | 94860959 | 94861340 |
| chr9 | 94864731 | 94866443 | YY1 | RH4,SK-N-SH | 94866091 | 94866378 |
| chr9 | 94866767 | 94869316 | YY1 | SK-N-SH | 94866952 | 94867079 |
| chr9 | 94866767 | 94869316 | YY1 | A-549,liver,Hep-G2 | 94867243 | 94867571 |
| chr9 | 94866767 | 94869316 | YY1 | Hep-G2 | 94867808 | 94868330 |
| chr9 | 94866767 | 94869316 | YY1 | RH4 | 94868233 | 94868406 |
| chr9 | 94860050 | 94862856 | ZBTB16 | KG-1 | 94861074 | 94861288 |
| chr9 | 94860050 | 94862856 | ZBTB33 | liver | 94861399 | 94861584 |
| chr9 | 94866767 | 94869316 | ZBTB33 | A-549,liver | 94867252 | 94867584 |
| chr9 | 94860050 | 94862856 | ZBTB40 | GM12878 | 94860884 | 94861284 |
| chr9 | 94866767 | 94869316 | ZBTB7B | Hep-G2 | 94867272 | 94867503 |
| chr9 | 94866767 | 94869316 | ZFP64 | Hep-G2 | 94867330 | 94867529 |
| chr9 | 94860050 | 94862856 | ZFX | MCF-7 | 94862227 | 94862675 |
| chr9 | 94866767 | 94869316 | ZFY | Hep-G2 | 94867316 | 94867487 |
| chr9 | 94866767 | 94869316 | ZHX1 | HeLa-S3 | 94867285 | 94867490 |
| chr9 | 94866767 | 94869316 | ZHX1 | HeLa-S3 | 94867889 | 94868233 |
| chr9 | 94866767 | 94869316 | ZHX2 | Hep-G2 | 94867298 | 94867449 |
| chr9 | 94866767 | 94869316 | ZKSCAN1 | Hep-G2 | 94867322 | 94867556 |
| chr9 | 94866767 | 94869316 | ZNF121 | HEK293 | 94868578 | 94868798 |
| chr9 | 94866767 | 94869316 | ZNF12 | Hep-G2 | 94867227 | 94867488 |
| chr9 | 94860050 | 94862856 | ZNF143 | GM12878 | 94860899 | 94861299 |
| chr9 | 94860050 | 94862856 | ZNF143 | FLP143HA | 94862605 | 94862769 |
| chr9 | 94866767 | 94869316 | ZNF143 | FLP143HA | 94868300 | 94868547 |
| chr9 | 94866767 | 94869316 | ZNF175 | Hep-G2 | 94867261 | 94867571 |
| chr9 | 94860050 | 94862856 | ZNF207 | GM12878 | 94860596 | 94861337 |
| chr9 | 94860050 | 94862856 | ZNF207 | GM12878 | 94861837 | 94862250 |
| chr9 | 94860050 | 94862856 | ZNF217 | GM12878 | 94860850 | 94861235 |
| chr9 | 94866767 | 94869316 | ZNF217 | Hep-G2 | 94867246 | 94867580 |
| chr9 | 94860050 | 94862856 | ZNF24 | GM12878 | 94861063 | 94861243 |
| chr9 | 94860050 | 94862856 | ZNF263 | K-562 | 94861079 | 94861299 |
| chr9 | 94860050 | 94862856 | ZNF263 | Hep-G2 | 94862557 | 94862678 |
| chr9 | 94866767 | 94869316 | ZNF274 | Hep-G2 | 94867304 | 94867483 |
| chr9 | 94866767 | 94869316 | ZNF317 | HEK293 | 94868061 | 94868207 |
| chr9 | 94866767 | 94869316 | ZNF337 | Hep-G2 | 94867329 | 94867546 |
| chr9 | 94866767 | 94869316 | ZNF384 | Hep-G2 | 94867336 | 94867521 |
| chr9 | 94866767 | 94869316 | ZNF3 | Hep-G2 | 94867280 | 94867477 |
| chr9 | 94866767 | 94869316 | ZNF3 | Hep-G2 | 94867944 | 94868223 |
| chr9 | 94860050 | 94862856 | ZNF407 | Hep-G2 | 94861107 | 94861261 |
| chr9 | 94866767 | 94869316 | ZNF44 | Hep-G2 | 94867296 | 94867480 |
| chr9 | 94866767 | 94869316 | ZNF585A | HEK293T | 94867315 | 94867504 |
| chr9 | 94860050 | 94862856 | ZNF592 | GM12878 | 94860972 | 94861285 |
| chr9 | 94866767 | 94869316 | ZNF592 | K-562 | 94867233 | 94867655 |
| chr9 | 94866767 | 94869316 | ZNF624 | A-549 | 94867288 | 94868710 |