| SE element chr | SE element start | SE element start | TF | TF biosample name | TF end | TF start |
|---|---|---|---|---|---|---|
| chr9 | 33166007 | 33167341 | AATF | NALM-6 | 33166889 | 33167104 |
| chr9 | 33166007 | 33167341 | AFF1 | SEM | 33166485 | 33166709 |
| chr9 | 33167547 | 33168227 | AFF1 | SEM | 33167555 | 33167903 |
| chr9 | 33160973 | 33162071 | AFF4 | MCF-7 | 33161408 | 33161741 |
| chr9 | 33166007 | 33167341 | AFF4 | HeLa | 33166266 | 33166814 |
| chr9 | 33166007 | 33167341 | AFF4 | HeLa | 33166357 | 33166858 |
| chr9 | 33166007 | 33167341 | AFF4 | HeLa,CD4 | 33166860 | 33167319 |
| chr9 | 33171080 | 33173880 | AFF4 | HeLa | 33172457 | 33172660 |
| chr9 | 33160973 | 33162071 | AHR | MCF-7 | 33161680 | 33161938 |
| chr9 | 33166007 | 33167341 | AHR | GM01310 | 33166017 | 33166130 |
| chr9 | 33166007 | 33167341 | AHR | GM01310 | 33166396 | 33166549 |
| chr9 | 33167547 | 33168227 | AHR | GM01310 | 33167642 | 33167758 |
| chr9 | 33166007 | 33167341 | APC | HCT-116 | 33166264 | 33167304 |
| chr9 | 33160973 | 33162071 | AR | LNCaP,MCF-7,MDA-MB-453,breast | 33161105 | 33161356 |
| chr9 | 33160973 | 33162071 | AR | prostate,LNCaP-abl,MDA-MB-453,VCaP-LTAD,LNCaP-95,primary-prostate-cancer,LNCaP-clone-FGC,LNCaP-C4-2B,PC-3,breast,22Rv1,MCF-7,VCaP,LNCaP,LAPC-4,DU145,breast-cancer,prostate-cancer,LTAD | 33161658 | 33161969 |
| chr9 | 33166007 | 33167341 | AR | LNCaP-clone-FGC | 33166308 | 33166691 |
| chr9 | 33171080 | 33173880 | AR | PC-3,MCF-7,LNCaP | 33172444 | 33172610 |
| chr9 | 33171080 | 33173880 | ARID1A | RMG-I | 33171227 | 33171551 |
| chr9 | 33171080 | 33173880 | ARID1A | RMG-I,endometrial-epithelial-cells,12Z,MCF-7 | 33172202 | 33172809 |
| chr9 | 33166007 | 33167341 | ARID1B | K-562,MCF-7 | 33166823 | 33167166 |
| chr9 | 33167547 | 33168227 | ARID1B | K-562 | 33167582 | 33167904 |
| chr9 | 33171080 | 33173880 | ARID1B | K-562,Hep-G2 | 33172410 | 33172970 |
| chr9 | 33171080 | 33173880 | ARID1B | K-562 | 33173454 | 33173658 |
| chr9 | 33166007 | 33167341 | ARID3A | GM12878 | 33166820 | 33167259 |
| chr9 | 33167547 | 33168227 | ARID3A | GM12878 | 33167568 | 33167739 |
| chr9 | 33171080 | 33173880 | ARID4A | Hep-G2 | 33172485 | 33172765 |
| chr9 | 33171080 | 33173880 | ARID4A | Hep-G2 | 33172921 | 33173122 |
| chr9 | 33166007 | 33167341 | ARID4B | PC-3 | 33166498 | 33167140 |
| chr9 | 33160973 | 33162071 | ARNT | RCC4 | 33161222 | 33161442 |
| chr9 | 33160973 | 33162071 | ARNT | MCF-7 | 33161427 | 33162060 |
| chr9 | 33166007 | 33167341 | ARNT | MCF-7 | 33166389 | 33166830 |
| chr9 | 33167547 | 33168227 | ARNT | K-562 | 33167666 | 33167997 |
| chr9 | 33171080 | 33173880 | ARNT | K-562,RCC4 | 33172410 | 33172696 |
| chr9 | 33166007 | 33167341 | ARNTL | Hep-G2 | 33166424 | 33166874 |
| chr9 | 33171080 | 33173880 | ASH2L | Hep-G2 | 33171115 | 33171351 |
| chr9 | 33171080 | 33173880 | ASH2L | Hep-G2 | 33172562 | 33173173 |
| chr9 | 33171080 | 33173880 | ATF1 | K-562 | 33172428 | 33172752 |
| chr9 | 33171080 | 33173880 | ATF2 | K-562 | 33172615 | 33172909 |
| chr9 | 33160973 | 33162071 | ATF3 | K-562,HCT-116 | 33161105 | 33161365 |
| chr9 | 33166007 | 33167341 | ATF3 | Hep-G2 | 33166687 | 33167327 |
| chr9 | 33166007 | 33167341 | ATF3 | HCT-116 | 33167022 | 33167121 |
| chr9 | 33171080 | 33173880 | ATF3 | liver | 33172260 | 33173021 |
| chr9 | 33171080 | 33173880 | ATF3 | liver,Hep-G2,K-562 | 33172397 | 33172801 |
| chr9 | 33160973 | 33162071 | ATF7 | GM12878 | 33161000 | 33161234 |
| chr9 | 33166007 | 33167341 | ATF7 | GM12878 | 33166226 | 33166566 |
| chr9 | 33166007 | 33167341 | ATF7 | K-562 | 33166946 | 33167238 |
| chr9 | 33171080 | 33173880 | ATF7 | K-562 | 33172368 | 33172681 |
| chr9 | 33166007 | 33167341 | BACH1 | WA01 | 33166662 | 33166883 |
| chr9 | 33166007 | 33167341 | BACH1 | GM12878 | 33166699 | 33167322 |
| chr9 | 33160973 | 33162071 | BCL11A | HUDEP-2 | 33161178 | 33161252 |
| chr9 | 33166007 | 33167341 | BCL11A | HUDEP-2 | 33166364 | 33166563 |
| chr9 | 33166007 | 33167341 | BCL11A | GM12878 | 33166627 | 33166736 |
| chr9 | 33166007 | 33167341 | BCL11A | GM12878 | 33167020 | 33167330 |
| chr9 | 33167547 | 33168227 | BCL11A | MCF-10A | 33167674 | 33167868 |
| chr9 | 33167547 | 33168227 | BCL11A | CD34 | 33168028 | 33168108 |
| chr9 | 33171080 | 33173880 | BCL11A | CD34 | 33172185 | 33172282 |
| chr9 | 33171080 | 33173880 | BCL11A | CD34 | 33172343 | 33172491 |
| chr9 | 33166007 | 33167341 | BCL11B | thymus | 33166228 | 33166368 |
| chr9 | 33166007 | 33167341 | BCL11B | thymus | 33166491 | 33166642 |
| chr9 | 33166007 | 33167341 | BCL11B | thymus | 33167146 | 33167314 |
| chr9 | 33160973 | 33162071 | BCL3 | A-549 | 33161792 | 33161951 |
| chr9 | 33166007 | 33167341 | BCL3 | A-549 | 33166732 | 33166935 |
| chr9 | 33167547 | 33168227 | BCL3 | A-549 | 33167557 | 33167899 |
| chr9 | 33166007 | 33167341 | BCL6 | SU-DHL-4 | 33166242 | 33166828 |
| chr9 | 33166007 | 33167341 | BCL6 | CD4,OCI-Ly7,OCI-Ly1 | 33166565 | 33167118 |
| chr9 | 33166007 | 33167341 | BCL6 | B-cell | 33167150 | 33167328 |
| chr9 | 33160973 | 33162071 | BCOR | WA01 | 33161469 | 33161626 |
| chr9 | 33160973 | 33162071 | BCOR | VCaP | 33161646 | 33162021 |
| chr9 | 33171080 | 33173880 | BCOR | K-562 | 33172323 | 33172753 |
| chr9 | 33166007 | 33167341 | BRCA1 | SH-EP | 33167157 | 33167267 |
| chr9 | 33167547 | 33168227 | BRCA1 | SH-EP | 33167606 | 33167693 |
| chr9 | 33166007 | 33167341 | BRD1 | RKO,HUES-64 | 33166376 | 33167040 |
| chr9 | 33167547 | 33168227 | BRD1 | RKO | 33167572 | 33167806 |
| chr9 | 33167547 | 33168227 | BRD1 | HUES-64 | 33167735 | 33168146 |
| chr9 | 33166007 | 33167341 | BRD7 | SUM159PT | 33167035 | 33167310 |
| chr9 | 33171080 | 33173880 | BRF1 | H9 | 33171759 | 33171940 |
| chr9 | 33160973 | 33162071 | CASZ1 | rhabdomyosarcoma | 33161093 | 33161382 |
| chr9 | 33160973 | 33162071 | CBFA2T2 | NCCIT | 33161422 | 33161653 |
| chr9 | 33171080 | 33173880 | CBFA2T2 | K-562 | 33172347 | 33172685 |
| chr9 | 33171080 | 33173880 | CBFA2T3 | K-562 | 33172336 | 33172704 |
| chr9 | 33160973 | 33162071 | CBFB | GM12878,SaOS-2 | 33161119 | 33161288 |
| chr9 | 33166007 | 33167341 | CBFB | GM12878 | 33166303 | 33166488 |
| chr9 | 33160973 | 33162071 | CBX3 | HCT-116 | 33161690 | 33161951 |
| chr9 | 33160973 | 33162071 | CDX2 | LS180 | 33161076 | 33161210 |
| chr9 | 33160973 | 33162071 | CDX2 | Caco-2,LS180,adult-duodenal-cell | 33161714 | 33161979 |
| chr9 | 33166007 | 33167341 | CDX2 | adult-duodenal-cell | 33166863 | 33167146 |
| chr9 | 33171080 | 33173880 | CDX2 | Caco-2 | 33172315 | 33172470 |
| chr9 | 33160973 | 33162071 | CEBPA | MV4-11 | 33161098 | 33161365 |
| chr9 | 33160973 | 33162071 | CEBPA | T-47D | 33161715 | 33161995 |
| chr9 | 33166007 | 33167341 | CEBPA | Kasumi-1 | 33166949 | 33167116 |
| chr9 | 33167547 | 33168227 | CEBPA | Kasumi-1 | 33167895 | 33168048 |
| chr9 | 33171080 | 33173880 | CEBPA | liver,Hep-G2 | 33172324 | 33172526 |
| chr9 | 33171080 | 33173880 | CEBPA | liver,Hep-G2 | 33172704 | 33172980 |
| chr9 | 33160973 | 33162071 | CEBPB | A-549,MV4-11,Ishikawa,MCF-7 | 33161037 | 33161279 |
| chr9 | 33160973 | 33162071 | CEBPB | MCF-7,Ishikawa,HCT-116 | 33161650 | 33161970 |
| chr9 | 33166007 | 33167341 | CEBPB | MV4-11 | 33166777 | 33167162 |
| chr9 | 33171080 | 33173880 | CEBPB | MCF-7,K-562 | 33172350 | 33172564 |
| chr9 | 33171080 | 33173880 | CEBPB | A-549,Hep-G2 | 33172800 | 33172973 |
| chr9 | 33166007 | 33167341 | CEBPD | Hep-G2,K-562 | 33167068 | 33167288 |
| chr9 | 33171080 | 33173880 | CEBPD | HAEC | 33172306 | 33172528 |
| chr9 | 33171080 | 33173880 | CEBPD | K-562 | 33172441 | 33172610 |
| chr9 | 33171080 | 33173880 | CEBPD | HAEC,Hep-G2 | 33172788 | 33172980 |
| chr9 | 33160973 | 33162071 | CHD1 | IMR-90,A-549 | 33161387 | 33161618 |
| chr9 | 33160973 | 33162071 | CHD1 | MCF-7,A-549 | 33161622 | 33162032 |
| chr9 | 33166007 | 33167341 | CHD1 | K-562 | 33166166 | 33166359 |
| chr9 | 33166007 | 33167341 | CHD1 | A-549 | 33166248 | 33166839 |
| chr9 | 33166007 | 33167341 | CHD1 | hMSC-TERT,K-562,A-549,WA01,IMR-90,HeLa-S3,LNCaP | 33166587 | 33167210 |
| chr9 | 33167547 | 33168227 | CHD1 | hMSC-TERT,K-562,IMR-90,MCF-7,HeLa-S3 | 33167616 | 33167874 |
| chr9 | 33160973 | 33162071 | CHD2 | HeLa-S3,SK-N-SH | 33160976 | 33161412 |
| chr9 | 33167547 | 33168227 | CHD2 | SK-N-SH | 33167586 | 33167703 |
| chr9 | 33171080 | 33173880 | CHD2 | HeLa-S3 | 33172349 | 33172578 |
| chr9 | 33171080 | 33173880 | CHD2 | HeLa-S3,Hep-G2 | 33172850 | 33173022 |
| chr9 | 33160973 | 33162071 | CHD4 | SCC-9,HaCaT | 33161015 | 33161307 |
| chr9 | 33160973 | 33162071 | CHD4 | keratinocyte | 33161227 | 33161408 |
| chr9 | 33160973 | 33162071 | CHD4 | HaCaT | 33161711 | 33161902 |
| chr9 | 33166007 | 33167341 | CHD4 | RH5 | 33166359 | 33166685 |
| chr9 | 33166007 | 33167341 | CHD4 | SCMC,keratinocyte | 33166710 | 33167022 |
| chr9 | 33167547 | 33168227 | CHD4 | A-549,GM12878 | 33167726 | 33168074 |
| chr9 | 33160973 | 33162071 | CHD8 | T-47D | 33161711 | 33161914 |
| chr9 | 33166007 | 33167341 | CHD8 | T-47D | 33167021 | 33167216 |
| chr9 | 33160973 | 33162071 | CREB1 | A-549 | 33161157 | 33161329 |
| chr9 | 33160973 | 33162071 | CREB1 | MCF-7,LNCaP-abl,Ishikawa | 33161596 | 33161883 |
| chr9 | 33166007 | 33167341 | CREB1 | A-549,MCF-7,LNCaP-abl,WA01 | 33167005 | 33167209 |
| chr9 | 33171080 | 33173880 | CREB1 | Hep-G2 | 33172540 | 33172644 |
| chr9 | 33171080 | 33173880 | CREB1 | Hep-G2 | 33172839 | 33172959 |
| chr9 | 33166007 | 33167341 | CREB3L1 | K-562 | 33166778 | 33167160 |
| chr9 | 33160973 | 33162071 | CREB5 | LNCaP | 33161548 | 33162057 |
| chr9 | 33160973 | 33162071 | CREBBP | MCF-7,fibroblast,keratinocyte | 33160990 | 33161359 |
| chr9 | 33160973 | 33162071 | CREBBP | PC-3 | 33161347 | 33161618 |
| chr9 | 33160973 | 33162071 | CREBBP | LS180,MCF-7,keratinocyte | 33161440 | 33161944 |
| chr9 | 33160973 | 33162071 | CREBBP | LS180 | 33161846 | 33161963 |
| chr9 | 33166007 | 33167341 | CREBBP | tonsil,PC-3 | 33166399 | 33166630 |
| chr9 | 33171080 | 33173880 | CREBBP | LS180 | 33172421 | 33172508 |
| chr9 | 33171080 | 33173880 | CREBBP | MCF-7 | 33172494 | 33172626 |
| chr9 | 33166007 | 33167341 | CREM | K-562 | 33167044 | 33167175 |
| chr9 | 33171080 | 33173880 | CREM | Hep-G2 | 33172462 | 33172980 |
| chr9 | 33166007 | 33167341 | CTBP1 | K-562 | 33166223 | 33166442 |
| chr9 | 33166007 | 33167341 | CTBP1 | MCF-7,K-562 | 33166824 | 33167314 |
| chr9 | 33171080 | 33173880 | CTBP1 | MCF-7,K-562 | 33172370 | 33172739 |
| chr9 | 33160973 | 33162071 | CTCF | THP-1 | 33161355 | 33161600 |
| chr9 | 33166007 | 33167341 | CTCF | colon | 33166123 | 33166374 |
| chr9 | 33166007 | 33167341 | CTCF | anterior-temporal-cortex,breast,GM04648 | 33166527 | 33166861 |
| chr9 | 33171080 | 33173880 | CTCF | KARPAS422 | 33171239 | 33171427 |
| chr9 | 33171080 | 33173880 | CTCF | hepatocyte,HeLa-S3 | 33172379 | 33172536 |
| chr9 | 33166007 | 33167341 | CTCFL | FT282,OVCAR-8 | 33166379 | 33167085 |
| chr9 | 33166007 | 33167341 | CTCFL | K-562,OVCAR-8,delta-47,Kelly | 33167008 | 33167334 |
| chr9 | 33160973 | 33162071 | CTNNB1 | LS180 | 33161728 | 33161876 |
| chr9 | 33167547 | 33168227 | CTNNB1 | hiPSC | 33167676 | 33167896 |
| chr9 | 33171080 | 33173880 | CTNNB1 | LS180 | 33171781 | 33171894 |
| chr9 | 33160973 | 33162071 | DAXX | PC-3 | 33161110 | 33161307 |
| chr9 | 33171080 | 33173880 | DDX20 | K-562 | 33172179 | 33172649 |
| chr9 | 33160973 | 33162071 | DDX5 | BT-549 | 33161117 | 33161340 |
| chr9 | 33166007 | 33167341 | DDX5 | BT-549 | 33166903 | 33167328 |
| chr9 | 33171080 | 33173880 | DDX5 | NTERA2 | 33173274 | 33173826 |
| chr9 | 33167547 | 33168227 | DEK | HeLa-S3 | 33167560 | 33167731 |
| chr9 | 33166007 | 33167341 | DMAP1 | Hep-G2 | 33166300 | 33166517 |
| chr9 | 33166007 | 33167341 | DMAP1 | Hep-G2 | 33166658 | 33167327 |
| chr9 | 33171080 | 33173880 | DMAP1 | Hep-G2 | 33172037 | 33172220 |
| chr9 | 33171080 | 33173880 | DMAP1 | Hep-G2 | 33172309 | 33172640 |
| chr9 | 33171080 | 33173880 | DMAP1 | Hep-G2 | 33172796 | 33173085 |
| chr9 | 33167547 | 33168227 | DPF2 | GM12878 | 33167555 | 33167982 |
| chr9 | 33171080 | 33173880 | DPF2 | MCF-7,K-562 | 33172380 | 33172858 |
| chr9 | 33166007 | 33167341 | DRAP1 | Hep-G2 | 33166256 | 33166561 |
| chr9 | 33171080 | 33173880 | DRAP1 | Hep-G2 | 33172380 | 33172548 |
| chr9 | 33171080 | 33173880 | DRAP1 | Hep-G2 | 33172853 | 33173038 |
| chr9 | 33167547 | 33168227 | E2F3 | K-562 | 33167575 | 33167894 |
| chr9 | 33160973 | 33162071 | E2F4 | MCF-10A | 33161100 | 33161287 |
| chr9 | 33166007 | 33167341 | E2F6 | K-562 | 33166201 | 33166508 |
| chr9 | 33166007 | 33167341 | E2F6 | A-549,WA01 | 33167008 | 33167288 |
| chr9 | 33167547 | 33168227 | E2F6 | K-562 | 33167999 | 33168113 |
| chr9 | 33166007 | 33167341 | E2F8 | GM12878 | 33166079 | 33166763 |
| chr9 | 33171080 | 33173880 | E2F8 | K-562 | 33172417 | 33172731 |
| chr9 | 33171080 | 33173880 | E4F1 | K-562 | 33172179 | 33172749 |
| chr9 | 33160973 | 33162071 | EBF3 | SK-N-SH | 33161011 | 33161190 |
| chr9 | 33171080 | 33173880 | EGR1 | liver | 33172336 | 33172506 |
| chr9 | 33171080 | 33173880 | EGR1 | Hep-G2 | 33172534 | 33172702 |
| chr9 | 33171080 | 33173880 | EGR1 | liver,Hep-G2 | 33172828 | 33173044 |
| chr9 | 33167547 | 33168227 | EHF | RWPE-1,primary-bronchial-epithelial | 33167558 | 33167800 |
| chr9 | 33167547 | 33168227 | EHMT2 | K-562 | 33167612 | 33167919 |
| chr9 | 33171080 | 33173880 | EHMT2 | K-562 | 33172327 | 33172506 |
| chr9 | 33160973 | 33162071 | ELF1 | MCF-7,SK-N-MC,SK-N-SH | 33161037 | 33161281 |
| chr9 | 33160973 | 33162071 | ELF1 | MCF-7 | 33161644 | 33162015 |
| chr9 | 33166007 | 33167341 | ELF1 | GM12878 | 33166343 | 33166631 |
| chr9 | 33166007 | 33167341 | ELF1 | MCF-7 | 33166980 | 33167105 |
| chr9 | 33171080 | 33173880 | ELF1 | Hep-G2 | 33172828 | 33173041 |
| chr9 | 33160973 | 33162071 | ELF3 | PDAC | 33161512 | 33162066 |
| chr9 | 33166007 | 33167341 | ELF3 | PDAC | 33166413 | 33166770 |
| chr9 | 33160973 | 33162071 | ELL2 | HeLa | 33161071 | 33161275 |
| chr9 | 33166007 | 33167341 | ELL2 | HeLa | 33166451 | 33166747 |
| chr9 | 33166007 | 33167341 | ELL2 | HeLa | 33166871 | 33167270 |
| chr9 | 33171080 | 33173880 | EOMES | hESC | 33172412 | 33172710 |
| chr9 | 33171080 | 33173880 | EOMES | hESC | 33172823 | 33172955 |
| chr9 | 33160973 | 33162071 | EP300 | A-549,T-47D,MCF-7,Ishikawa,HeLa-S3,SK-N-SH | 33161013 | 33161429 |
| chr9 | 33160973 | 33162071 | EP300 | PC-3 | 33161370 | 33161608 |
| chr9 | 33160973 | 33162071 | EP300 | T-47D,MCF-7,Hep-G2,Ishikawa,LNCaP-FGC | 33161537 | 33161973 |
| chr9 | 33166007 | 33167341 | EP300 | PC-3 | 33166429 | 33166561 |
| chr9 | 33166007 | 33167341 | EP300 | A-549,pulmonary-artery,WA01,T-47D,MCF-7,Hep-G2,SK-N-SH,fibroblast,osteoblast,Ishikawa,HeLa-S3,PC-3 | 33166962 | 33167241 |
| chr9 | 33171080 | 33173880 | EP300 | Hep-G2,HeLa-S3 | 33172360 | 33172650 |
| chr9 | 33171080 | 33173880 | EP300 | Hep-G2 | 33172800 | 33173031 |
| chr9 | 33160973 | 33162071 | ERF | VCaP | 33161708 | 33161888 |
| chr9 | 33160973 | 33162071 | ERG | VCaP | 33161703 | 33161973 |
| chr9 | 33166007 | 33167341 | ERG | SKNO-1 | 33166388 | 33166759 |
| chr9 | 33171080 | 33173880 | ERG | aortic-endothelial-cell,RWPE-1 | 33172442 | 33172665 |
| chr9 | 33160973 | 33162071 | ESR1 | MCF-7,SUM44PE,endometrioid-adenocarcinoma,breast,MDA-MB-231,T-47D,Ishikawa | 33161097 | 33161377 |
| chr9 | 33160973 | 33162071 | ESR1 | primary-breast-cancer,MCF-7,breast-cancer,MCF-7-Luc,SUM44PE,ZR751,MCF-7-Luc-Y537S,breast,endometrioid-adenocarcinoma,primary-endometrium-cancer,MCF-7L,T-47D,MDA-MB-134-VI,Ishikawa | 33161538 | 33161956 |
| chr9 | 33166007 | 33167341 | ESR1 | breast | 33166338 | 33166521 |
| chr9 | 33171080 | 33173880 | ESR1 | MCF-7,T-47D | 33172417 | 33172659 |
| chr9 | 33166007 | 33167341 | ESR2 | MDA-MB-231 | 33166561 | 33166965 |
| chr9 | 33160973 | 33162071 | ESRRA | BT-474 | 33161009 | 33161304 |
| chr9 | 33160973 | 33162071 | ESRRG | BT-474 | 33161458 | 33162015 |
| chr9 | 33166007 | 33167341 | ETS1 | HEY-A8,786-O,HUVEC-C,K-562 | 33166369 | 33166698 |
| chr9 | 33166007 | 33167341 | ETS1 | K-562 | 33166745 | 33166885 |
| chr9 | 33166007 | 33167341 | ETS1 | HUVEC-C,THP-6,cardiomyocyte,K-562,Hep-G2,A-549 | 33166871 | 33167280 |
| chr9 | 33171080 | 33173880 | ETS1 | Hep-G2 | 33172467 | 33172632 |
| chr9 | 33171080 | 33173880 | ETS1 | Hep-G2 | 33172809 | 33173047 |
| chr9 | 33160973 | 33162071 | ETV1 | COLO-800 | 33160992 | 33161204 |
| chr9 | 33167547 | 33168227 | ETV1 | LNCaP,GIST-T1,MDA-Pca-2b | 33167580 | 33167708 |
| chr9 | 33167547 | 33168227 | ETV2 | induced-endothelial-cell | 33167720 | 33167880 |
| chr9 | 33160973 | 33162071 | ETV4 | T-47D | 33161004 | 33161357 |
| chr9 | 33166007 | 33167341 | EZH1 | ProEs | 33166871 | 33167250 |
| chr9 | 33160973 | 33162071 | EZH2 | RH30 | 33161045 | 33161714 |
| chr9 | 33166007 | 33167341 | EZH2 | RH30 | 33166277 | 33166493 |
| chr9 | 33166007 | 33167341 | EZH2 | peripheral-blood-mononuclear-cell,DND41,Karpas-422,prostate-cancer,WA01,neural,neuron | 33166831 | 33167230 |
| chr9 | 33167547 | 33168227 | EZH2 | peripheral-blood-mononuclear-cell,WA01,neural,neuron | 33167586 | 33167882 |
| chr9 | 33167547 | 33168227 | EZH2 | Karpas-422 | 33167843 | 33168069 |
| chr9 | 33171080 | 33173880 | EZH2 | SU-DHL-5 | 33171257 | 33171342 |
| chr9 | 33166007 | 33167341 | FLI1 | SKNO-1,A-673 | 33166422 | 33166747 |
| chr9 | 33171080 | 33173880 | FLI1 | HUVEC-C | 33172473 | 33172617 |
| chr9 | 33160973 | 33162071 | FOS | HCT-116,myometrium,MCF-10A,leiomyoma,HeLa-S3,endothelial,K-562,MCF-7,IMR-90 | 33161060 | 33161321 |
| chr9 | 33160973 | 33162071 | FOS | CFPAC-1 | 33161251 | 33162038 |
| chr9 | 33160973 | 33162071 | FOS | MCF-7 | 33161656 | 33161903 |
| chr9 | 33166007 | 33167341 | FOS | Hep-G2 | 33167007 | 33167156 |
| chr9 | 33166007 | 33167341 | FOS | myometrium | 33167217 | 33167277 |
| chr9 | 33171080 | 33173880 | FOS | HeLa-S3,CFPAC-1,MCF-7 | 33172489 | 33172745 |
| chr9 | 33160973 | 33162071 | FOSL1 | MDA-MB-231,BT-549,K-562,HCT-116,MNNG-HOS | 33161029 | 33161400 |
| chr9 | 33160973 | 33162071 | FOSL1 | BT-549,MNNG-HOS | 33161496 | 33161717 |
| chr9 | 33160973 | 33162071 | FOSL1 | BT-549 | 33161831 | 33161979 |
| chr9 | 33166007 | 33167341 | FOSL1 | BT-549 | 33166960 | 33167329 |
| chr9 | 33167547 | 33168227 | FOSL1 | MNNG-HOS | 33167672 | 33167945 |
| chr9 | 33171080 | 33173880 | FOSL1 | K-562 | 33172405 | 33172841 |
| chr9 | 33160973 | 33162071 | FOSL2 | A-549,Hep-G2,MDA-MB-231,NPC,hESC,LPS141,SK-N-SH,MCF-7 | 33161025 | 33161410 |
| chr9 | 33160973 | 33162071 | FOSL2 | MCF-7,A-549 | 33161710 | 33161943 |
| chr9 | 33166007 | 33167341 | FOSL2 | NPC,A-549 | 33167073 | 33167285 |
| chr9 | 33171080 | 33173880 | FOSL2 | MCF-7,A-549,Hep-G2 | 33172448 | 33172671 |
| chr9 | 33160973 | 33162071 | FOXA1 | ZR751,MCF-7,breast,A-549,MCF-7-TAMR-1,breast-cancer,liver | 33161139 | 33161369 |
| chr9 | 33160973 | 33162071 | FOXA1 | LS180 | 33161533 | 33161609 |
| chr9 | 33160973 | 33162071 | FOXA1 | pancreatic-progenitor,LNCaP,breast,primary-breast-cancer,MCF-7-TAMR-1,Ishikawa,CFPAC-1,ZR-75-1,prostate-cancer,LS180,A-549,22Rv1,primary-prostate-cancer,T-47D,ZR751,LNCaP-abl,PDAC,DU145,LNCaP-C4-2B,MCF-7,NCI-H3122,liver,breast-cancer,prostate | 33161668 | 33162024 |
| chr9 | 33166007 | 33167341 | FOXA1 | VCaP | 33166568 | 33166835 |
| chr9 | 33167547 | 33168227 | FOXA1 | breast-cancer | 33167738 | 33168024 |
| chr9 | 33171080 | 33173880 | FOXA1 | pancreatic-progenitor,MCF-7,CFPAC-1,A-549,liver | 33172421 | 33172648 |
| chr9 | 33160973 | 33162071 | FOXA2 | PANC-1,KerCT,Caco-2,CFPAC-1,liver | 33161675 | 33162019 |
| chr9 | 33171080 | 33173880 | FOXA2 | liver,Caco-2,CFPAC-1 | 33172404 | 33172686 |
| chr9 | 33171080 | 33173880 | FOXA2 | liver | 33172799 | 33173016 |
| chr9 | 33171080 | 33173880 | FOXJ3 | Hep-G2 | 33172540 | 33172895 |
| chr9 | 33160973 | 33162071 | FOXL2 | HGrC1,KGN | 33161020 | 33161303 |
| chr9 | 33171080 | 33173880 | FOXL2 | HGrC1 | 33172399 | 33172566 |
| chr9 | 33160973 | 33162071 | FOXM1 | MDA-MB-231,SK-N-SH,Ishikawa | 33161041 | 33161306 |
| chr9 | 33160973 | 33162071 | FOXM1 | MCF-7,Ishikawa | 33161653 | 33161870 |
| chr9 | 33171080 | 33173880 | FOXM1 | K-562 | 33172438 | 33172656 |
| chr9 | 33160973 | 33162071 | FOXP1 | H9 | 33161021 | 33161247 |
| chr9 | 33160973 | 33162071 | FOXP1 | Hep-G2 | 33161809 | 33161979 |
| chr9 | 33166007 | 33167341 | FOXP1 | B-cell | 33166440 | 33166623 |
| chr9 | 33171080 | 33173880 | FOXP1 | Hep-G2 | 33172464 | 33172660 |
| chr9 | 33171080 | 33173880 | FOXP1 | Hep-G2 | 33172770 | 33173025 |
| chr9 | 33166007 | 33167341 | FOXP2 | PFSK1 | 33167008 | 33167161 |
| chr9 | 33160973 | 33162071 | FOXP4 | Hep-G2 | 33161741 | 33161954 |
| chr9 | 33171080 | 33173880 | FOXP4 | Hep-G2 | 33172382 | 33172719 |
| chr9 | 33171080 | 33173880 | FOXP4 | Hep-G2 | 33172795 | 33173070 |
| chr9 | 33167547 | 33168227 | FUS | Hep-G2 | 33167572 | 33167753 |
| chr9 | 33160973 | 33162071 | GABPA | VCaP | 33161708 | 33161926 |
| chr9 | 33166007 | 33167341 | GABPA | WA01 | 33166555 | 33166895 |
| chr9 | 33166007 | 33167341 | GABPA | WA01,K-562 | 33167080 | 33167314 |
| chr9 | 33171080 | 33173880 | GABPA | liver | 33172832 | 33173007 |
| chr9 | 33166007 | 33167341 | GATA1 | erythroblast | 33166873 | 33167275 |
| chr9 | 33166007 | 33167341 | GATA1 | HUDEP-2 | 33167209 | 33167314 |
| chr9 | 33171080 | 33173880 | GATA1 | K-562,erythroblast,erythroid,CD34 | 33172360 | 33172680 |
| chr9 | 33160973 | 33162071 | GATA2 | LNCaP | 33161774 | 33161980 |
| chr9 | 33171080 | 33173880 | GATA2 | TF1,dermal-fibroblast,LNCaP,HUVEC-C,Hep-G2,K-562,endothelial,primary-endometrial-stromal-cell | 33172395 | 33172693 |
| chr9 | 33160973 | 33162071 | GATA3 | A-549,T-47D | 33161065 | 33161327 |
| chr9 | 33160973 | 33162071 | GATA3 | breast,MCF-7,T-47D | 33161622 | 33162015 |
| chr9 | 33167547 | 33168227 | GATA3 | Jurkat,T-47D | 33167576 | 33167759 |
| chr9 | 33171080 | 33173880 | GATA3 | A-549,MCF-7 | 33172456 | 33172624 |
| chr9 | 33167547 | 33168227 | GATA4 | foregut,Hep-G2,pancreatic-progenitor | 33167580 | 33167819 |
| chr9 | 33171080 | 33173880 | GATA4 | A-549,Hep-G2,foregut,pancreatic-progenitor | 33172250 | 33172816 |
| chr9 | 33160973 | 33162071 | GATA6 | YCC-3,OACP4-C,AGS | 33161443 | 33162028 |
| chr9 | 33166007 | 33167341 | GATA6 | PATU8988 | 33166779 | 33166961 |
| chr9 | 33167547 | 33168227 | GATA6 | HUES-8,PATU8988 | 33167558 | 33167892 |
| chr9 | 33171080 | 33173880 | GATA6 | OACP4-C,foregut,Caco-2,HUES-8,pancreatic-progenitor,YCC-3,AGS,endoderm,HUG1N | 33172291 | 33172780 |
| chr9 | 33166007 | 33167341 | GATAD1 | HeLa | 33166897 | 33167212 |
| chr9 | 33160973 | 33162071 | GATAD2B | GM12878 | 33161005 | 33161245 |
| chr9 | 33166007 | 33167341 | GATAD2B | GM12878 | 33166548 | 33167320 |
| chr9 | 33171080 | 33173880 | GATAD2B | K-562 | 33172439 | 33172636 |
| chr9 | 33160973 | 33162071 | GFI1B | HEK293,SET-2,K-562 | 33161041 | 33161291 |
| chr9 | 33167547 | 33168227 | GFI1B | K-562 | 33167650 | 33167761 |
| chr9 | 33160973 | 33162071 | GFI1 | NB4,THP-1 | 33160979 | 33161283 |
| chr9 | 33166007 | 33167341 | GLI4 | HEK293 | 33166925 | 33167175 |
| chr9 | 33160973 | 33162071 | GLIS1 | HEK293 | 33161078 | 33161624 |
| chr9 | 33160973 | 33162071 | GLIS2 | HEK293,HCT-116 | 33161008 | 33161515 |
| chr9 | 33167547 | 33168227 | GLIS2 | HEK293,HCT-116 | 33167586 | 33168030 |
| chr9 | 33171080 | 33173880 | GMEB1 | K-562 | 33172435 | 33172720 |
| chr9 | 33171080 | 33173880 | GMEB1 | Hep-G2 | 33172630 | 33173168 |
| chr9 | 33160973 | 33162071 | GTF2B | IMR-90,HeLa | 33161014 | 33161292 |
| chr9 | 33160973 | 33162071 | GTF2F1 | HeLa-S3 | 33161004 | 33161254 |
| chr9 | 33166007 | 33167341 | GTF2F1 | MCF-7,K-562 | 33166817 | 33167317 |
| chr9 | 33171080 | 33173880 | GTF2F1 | HeLa-S3 | 33172330 | 33172459 |
| chr9 | 33166007 | 33167341 | GTF3C2 | K-562 | 33166873 | 33167040 |
| chr9 | 33167547 | 33168227 | GTF3C2 | H9 | 33167637 | 33168011 |
| chr9 | 33166007 | 33167341 | HBP1 | Hep-G2 | 33167136 | 33167293 |
| chr9 | 33166007 | 33167341 | HCFC1 | K-562 | 33166449 | 33166585 |
| chr9 | 33166007 | 33167341 | HCFC1 | K-562,MCF-7,GM12878,HeLa-S3 | 33167066 | 33167247 |
| chr9 | 33160973 | 33162071 | HDAC1 | K-562,MCF-7 | 33161012 | 33161270 |
| chr9 | 33160973 | 33162071 | HDAC1 | PC-3 | 33161343 | 33161630 |
| chr9 | 33166007 | 33167341 | HDAC1 | K-562,NB4 | 33166184 | 33166450 |
| chr9 | 33166007 | 33167341 | HDAC1 | MCF-7,PC-3 | 33166329 | 33166987 |
| chr9 | 33167547 | 33168227 | HDAC1 | K-562 | 33167830 | 33167978 |
| chr9 | 33171080 | 33173880 | HDAC1 | K-562,MCF-7 | 33172382 | 33172685 |
| chr9 | 33160973 | 33162071 | HDAC2 | RH4,MCF-7,K-562 | 33161041 | 33161298 |
| chr9 | 33160973 | 33162071 | HDAC2 | PC-3 | 33161347 | 33161627 |
| chr9 | 33160973 | 33162071 | HDAC2 | MCF-7,Hep-G2 | 33161706 | 33161990 |
| chr9 | 33166007 | 33167341 | HDAC2 | PC-3 | 33166237 | 33166362 |
| chr9 | 33166007 | 33167341 | HDAC2 | WA01,PC-3 | 33166481 | 33167020 |
| chr9 | 33166007 | 33167341 | HDAC2 | Hep-G2,MCF-7,K-562 | 33166906 | 33167198 |
| chr9 | 33171080 | 33173880 | HDAC2 | MCF-7,K-562 | 33172340 | 33172699 |
| chr9 | 33171080 | 33173880 | HDAC2 | Hep-G2 | 33172383 | 33173057 |
| chr9 | 33166007 | 33167341 | HDAC8 | K-562 | 33166760 | 33167185 |
| chr9 | 33167547 | 33168227 | HDAC8 | K-562 | 33167556 | 33168008 |
| chr9 | 33171080 | 33173880 | HDGF | K-562 | 33171616 | 33171894 |
| chr9 | 33171080 | 33173880 | HDGF | K-562 | 33172264 | 33172708 |
| chr9 | 33171080 | 33173880 | HDGF | K-562 | 33173501 | 33173866 |
| chr9 | 33166007 | 33167341 | HIC1 | HEK293 | 33166821 | 33167271 |
| chr9 | 33160973 | 33162071 | HIF1A | PC-3,BEAS-2B | 33161072 | 33161323 |
| chr9 | 33166007 | 33167341 | HIF1A | BEAS-2B | 33166786 | 33167260 |
| chr9 | 33166007 | 33167341 | HIF1A | PC-3 | 33167170 | 33167337 |
| chr9 | 33171080 | 33173880 | HIF3A | Hep-3B2-1-7 | 33172315 | 33172613 |
| chr9 | 33160973 | 33162071 | HMGB2 | HUVEC-C | 33161441 | 33161925 |
| chr9 | 33160973 | 33162071 | HNF4A | gastric-epithelial-cell,KATO-III,IM95 | 33161088 | 33161374 |
| chr9 | 33160973 | 33162071 | HNF4A | Caco-2,KATO-III,GP5D,Hep-G2,liver,LoVo,IM95 | 33161610 | 33161981 |
| chr9 | 33166007 | 33167341 | HNF4A | IM95 | 33166578 | 33167041 |
| chr9 | 33171080 | 33173880 | HNF4A | Caco-2,KATO-III,liver | 33172413 | 33172640 |
| chr9 | 33171080 | 33173880 | HNF4A | Caco-2,Hep-G2,gastric-epithelial-cell,liver | 33172784 | 33173063 |
| chr9 | 33160973 | 33162071 | HNF4G | 22Rv1 | 33161642 | 33161978 |
| chr9 | 33166007 | 33167341 | HNF4G | 22Rv1 | 33167034 | 33167329 |
| chr9 | 33171080 | 33173880 | HNF4G | liver | 33172400 | 33172548 |
| chr9 | 33171080 | 33173880 | HNF4G | liver,Hep-G2 | 33172782 | 33173054 |
| chr9 | 33166007 | 33167341 | HOXA3 | Hep-G2 | 33166244 | 33166446 |
| chr9 | 33171080 | 33173880 | HOXA3 | Hep-G2 | 33172558 | 33172750 |
| chr9 | 33171080 | 33173880 | HOXA3 | Hep-G2 | 33172882 | 33173164 |
| chr9 | 33160973 | 33162071 | HOXB13 | prostate,prostate-cancer | 33161710 | 33162016 |
| chr9 | 33167547 | 33168227 | HOXB13 | prostate | 33167576 | 33167734 |
| chr9 | 33167547 | 33168227 | HOXB13 | A-549 | 33167650 | 33167903 |
| chr9 | 33167547 | 33168227 | HOXB5 | A-549 | 33167597 | 33167789 |
| chr9 | 33167547 | 33168227 | ID3 | K-562 | 33167560 | 33168029 |
| chr9 | 33166007 | 33167341 | ILF3 | K-562 | 33166931 | 33167298 |
| chr9 | 33167547 | 33168227 | ILF3 | K-562 | 33167705 | 33167951 |
| chr9 | 33166007 | 33167341 | IRF1 | PDAC | 33166624 | 33167121 |
| chr9 | 33166007 | 33167341 | IRF1 | K-562 | 33166953 | 33167319 |
| chr9 | 33160973 | 33162071 | IRF2 | keratinocyte | 33160994 | 33161783 |
| chr9 | 33167547 | 33168227 | IRF3 | GM12878 | 33167629 | 33167942 |
| chr9 | 33166007 | 33167341 | IRF4 | T-cell | 33166558 | 33167307 |
| chr9 | 33166007 | 33167341 | IRF4 | BC-3 | 33166560 | 33166854 |
| chr9 | 33166007 | 33167341 | IRF4 | U266 | 33167138 | 33167306 |
| chr9 | 33166007 | 33167341 | IRF8 | THP-1 | 33166402 | 33166629 |
| chr9 | 33166007 | 33167341 | ISL2 | Hep-G2 | 33166976 | 33167323 |
| chr9 | 33171080 | 33173880 | ISL2 | Hep-G2 | 33172871 | 33173024 |
| chr9 | 33166007 | 33167341 | JARID2 | MRC-5 | 33166246 | 33166603 |
| chr9 | 33167547 | 33168227 | JARID2 | MRC-5 | 33167554 | 33168180 |
| chr9 | 33160973 | 33162071 | JMJD1C | NB4,Kasumi-1 | 33161138 | 33161291 |
| chr9 | 33166007 | 33167341 | JMJD1C | HL-60 | 33166102 | 33166281 |
| chr9 | 33166007 | 33167341 | JMJD1C | NB4,HL-60,Kasumi-1 | 33166497 | 33166723 |
| chr9 | 33166007 | 33167341 | JMJD1C | Kasumi-1 | 33166873 | 33167247 |
| chr9 | 33167547 | 33168227 | JMJD1C | Kasumi-1 | 33168052 | 33168199 |
| chr9 | 33160973 | 33162071 | JUNB | CFPAC-1 | 33161022 | 33161905 |
| chr9 | 33160973 | 33162071 | JUNB | MCF10A-Er-Src,GM12878,CD4,HAEC,keratinocyte | 33161097 | 33161341 |
| chr9 | 33166007 | 33167341 | JUNB | Karpas-299 | 33166234 | 33167170 |
| chr9 | 33171080 | 33173880 | JUNB | HAEC | 33172450 | 33172644 |
| chr9 | 33171080 | 33173880 | JUNB | CFPAC-1 | 33172570 | 33172918 |
| chr9 | 33160973 | 33162071 | JUND | MCF-7,HCT-116,A-549,Kasumi-1,liver,Calu-3,K-562,HT29,GP5D,SK-N-SH,HeLa-S3,T-47D | 33161100 | 33161413 |
| chr9 | 33160973 | 33162071 | JUND | HT29,MCF-7,HCT-116 | 33161708 | 33161952 |
| chr9 | 33171080 | 33173880 | JUND | HeLa-S3,Hep-G2,K-562,liver | 33172396 | 33172713 |
| chr9 | 33171080 | 33173880 | JUND | Hep-G2,liver | 33172580 | 33173020 |
| chr9 | 33160973 | 33162071 | JUN | MCF-7,HAEC,HeLa-S3,MDA-MB-231,MCF10A-Er-Src,endothelial,Karpas-299,myometrium,BT-549,HUES-8,K-562,786-O,MDA-BoM-1833,primary-lung-fibroblast | 33161089 | 33161485 |
| chr9 | 33160973 | 33162071 | JUN | MCF-7 | 33161625 | 33161974 |
| chr9 | 33171080 | 33173880 | JUN | endothelial,HAEC,HeLa-S3,HUES-8 | 33172342 | 33172710 |
| chr9 | 33171080 | 33173880 | JUN | Hep-G2 | 33172761 | 33172899 |
| chr9 | 33166007 | 33167341 | KLF12 | HEK293 | 33166758 | 33166979 |
| chr9 | 33166007 | 33167341 | KLF12 | HEK293 | 33167143 | 33167338 |
| chr9 | 33166007 | 33167341 | KLF14 | HEK293 | 33166983 | 33167288 |
| chr9 | 33166007 | 33167341 | KLF16 | HEK293 | 33166860 | 33167247 |
| chr9 | 33171080 | 33173880 | KLF16 | K-562 | 33172419 | 33172593 |
| chr9 | 33160973 | 33162071 | KLF4 | keratinocyte | 33161741 | 33161881 |
| chr9 | 33160973 | 33162071 | KLF4 | BJ | 33161855 | 33162051 |
| chr9 | 33166007 | 33167341 | KLF4 | PDAC,keratinocyte,WIBR3,HAP1 | 33166888 | 33167338 |
| chr9 | 33160973 | 33162071 | KLF5 | ESO-26 | 33160985 | 33161426 |
| chr9 | 33160973 | 33162071 | KLF5 | ESO-26,KATO-III,GP5D | 33161583 | 33162029 |
| chr9 | 33167547 | 33168227 | KLF5 | GM12878 | 33167609 | 33168016 |
| chr9 | 33166007 | 33167341 | KLF6 | PDAC | 33166136 | 33167116 |
| chr9 | 33166007 | 33167341 | KLF6 | Hep-G2 | 33166285 | 33166479 |
| chr9 | 33167547 | 33168227 | KLF6 | Hep-G2 | 33167556 | 33167744 |
| chr9 | 33167547 | 33168227 | KLF6 | Hep-G2 | 33167865 | 33168077 |
| chr9 | 33171080 | 33173880 | KLF6 | Hep-G2 | 33172076 | 33172238 |
| chr9 | 33171080 | 33173880 | KLF6 | K-562 | 33172384 | 33172581 |
| chr9 | 33171080 | 33173880 | KLF6 | Hep-G2 | 33172507 | 33172658 |
| chr9 | 33171080 | 33173880 | KLF6 | Hep-G2 | 33172825 | 33173026 |
| chr9 | 33166007 | 33167341 | KLF7 | HEK293 | 33166952 | 33167200 |
| chr9 | 33160973 | 33162071 | KLF9 | GBM1A | 33161104 | 33161246 |
| chr9 | 33166007 | 33167341 | KLF9 | GBM1A | 33166759 | 33166870 |
| chr9 | 33166007 | 33167341 | L3MBTL2 | K-562 | 33166897 | 33167323 |
| chr9 | 33171080 | 33173880 | L3MBTL2 | K-562 | 33172352 | 33172624 |
| chr9 | 33171080 | 33173880 | LDB1 | K-562,HEP | 33172368 | 33172624 |
| chr9 | 33171080 | 33173880 | LEF1 | K-562 | 33172280 | 33172678 |
| chr9 | 33160973 | 33162071 | LHX2 | retina | 33161025 | 33161310 |
| chr9 | 33166007 | 33167341 | LMO2 | Kasumi-1 | 33166585 | 33166856 |
| chr9 | 33166007 | 33167341 | MAFB | keratinocyte | 33167039 | 33167218 |
| chr9 | 33160973 | 33162071 | MAFF | HeLa-S3 | 33161050 | 33161240 |
| chr9 | 33166007 | 33167341 | MAFF | HeLa-S3 | 33166997 | 33167259 |
| chr9 | 33166007 | 33167341 | MAFF | GM12878 | 33167132 | 33167253 |
| chr9 | 33167547 | 33168227 | MAFF | GM12878 | 33167895 | 33168044 |
| chr9 | 33171080 | 33173880 | MAFF | HeLa-S3 | 33172327 | 33172762 |
| chr9 | 33171080 | 33173880 | MAFG | K-562 | 33172286 | 33172771 |
| chr9 | 33160973 | 33162071 | MAF | CD4 | 33161074 | 33161356 |
| chr9 | 33171080 | 33173880 | MAFK | HeLa-S3,Hep-G2 | 33172376 | 33172618 |
| chr9 | 33160973 | 33162071 | MAML1 | SCC | 33161065 | 33161336 |
| chr9 | 33160973 | 33162071 | MAML1 | SCC | 33161654 | 33161962 |
| chr9 | 33171080 | 33173880 | MAML1 | SCC | 33172465 | 33172653 |
| chr9 | 33160973 | 33162071 | MAX | A-549,MCF-7,HeLa-S3,Ishikawa,SK-N-SH,P493-6 | 33160987 | 33161317 |
| chr9 | 33160973 | 33162071 | MAX | MCF-7,Ishikawa | 33161569 | 33161960 |
| chr9 | 33166007 | 33167341 | MAX | A-549,MCF-7,NCI-H2171,K-562,SK-N-SH,P493-6 | 33166218 | 33166503 |
| chr9 | 33166007 | 33167341 | MAX | Hep-G2 | 33166745 | 33166905 |
| chr9 | 33166007 | 33167341 | MAX | A-549,MCF-7,HCT-116,Hep-G2,HeLa-S3,Ishikawa,liver,P493-6 | 33166978 | 33167286 |
| chr9 | 33167547 | 33168227 | MAX | K-562 | 33167946 | 33168145 |
| chr9 | 33171080 | 33173880 | MAX | MCF-7,liver,HeLa-S3,endothelial | 33172367 | 33172602 |
| chr9 | 33171080 | 33173880 | MAX | Hep-G2,liver | 33172696 | 33173067 |
| chr9 | 33160973 | 33162071 | MAZ | MCF-7 | 33161577 | 33161851 |
| chr9 | 33166007 | 33167341 | MAZ | K-562 | 33166257 | 33166593 |
| chr9 | 33166007 | 33167341 | MAZ | IMR-90 | 33166793 | 33166909 |
| chr9 | 33166007 | 33167341 | MAZ | Hep-G2 | 33166890 | 33167008 |
| chr9 | 33166007 | 33167341 | MAZ | A-549 | 33166959 | 33167073 |
| chr9 | 33160973 | 33162071 | MBD2 | MCF-7 | 33161644 | 33161984 |
| chr9 | 33166007 | 33167341 | MBD2 | K-562 | 33167126 | 33167246 |
| chr9 | 33160973 | 33162071 | MBD3 | MCF-7 | 33161484 | 33161645 |
| chr9 | 33160973 | 33162071 | MED12 | leiomyoma,myometrium | 33161121 | 33161275 |
| chr9 | 33166007 | 33167341 | MED12 | leiomyoma,myometrium | 33167146 | 33167320 |
| chr9 | 33167547 | 33168227 | MED12 | leiomyoma | 33167987 | 33168147 |
| chr9 | 33160973 | 33162071 | MEF2A | SK-N-SH | 33161086 | 33161226 |
| chr9 | 33171080 | 33173880 | MEF2A | Hep-G2 | 33172805 | 33173042 |
| chr9 | 33166007 | 33167341 | MEF2B | GM12878 | 33166233 | 33167247 |
| chr9 | 33160973 | 33162071 | MEN1 | PC-3,MCF-7 | 33161619 | 33161877 |
| chr9 | 33166007 | 33167341 | MEN1 | RS4-11,IMS-M2 | 33166231 | 33166646 |
| chr9 | 33167547 | 33168227 | MEN1 | RS4-11 | 33167551 | 33167884 |
| chr9 | 33166007 | 33167341 | MITF | 501-mel | 33166905 | 33167207 |
| chr9 | 33171080 | 33173880 | MITF | K-562 | 33172272 | 33172514 |
| chr9 | 33166007 | 33167341 | MLLT1 | MCF-7 | 33166226 | 33166621 |
| chr9 | 33166007 | 33167341 | MLLT1 | K-562,MV4-11 | 33166505 | 33167249 |
| chr9 | 33167547 | 33168227 | MLLT1 | K-562,GM12878,MV4-11 | 33167549 | 33168047 |
| chr9 | 33171080 | 33173880 | MLLT1 | K-562 | 33172101 | 33172581 |
| chr9 | 33167547 | 33168227 | MLLT3 | HSPC | 33167856 | 33168191 |
| chr9 | 33166007 | 33167341 | MLX | Hep-G2 | 33166196 | 33166388 |
| chr9 | 33167547 | 33168227 | MLX | Hep-G2 | 33167584 | 33167816 |
| chr9 | 33160973 | 33162071 | MNT | MCF-7 | 33161641 | 33161919 |
| chr9 | 33171080 | 33173880 | MNT | MCF-7,K-562 | 33172327 | 33172654 |
| chr9 | 33166007 | 33167341 | MSX2 | MCF-7 | 33166891 | 33167236 |
| chr9 | 33160973 | 33162071 | MTA1 | MCF-7 | 33161372 | 33161852 |
| chr9 | 33166007 | 33167341 | MTA1 | MCF-7 | 33166936 | 33167255 |
| chr9 | 33171080 | 33173880 | MTA1 | K-562 | 33172320 | 33172762 |
| chr9 | 33171080 | 33173880 | MTA1 | Hep-G2 | 33172874 | 33173113 |
| chr9 | 33160973 | 33162071 | MTA2 | RH4 | 33160980 | 33161355 |
| chr9 | 33166007 | 33167341 | MTA2 | K-562 | 33166108 | 33166493 |
| chr9 | 33166007 | 33167341 | MTA2 | GM12878,pre-B-cell | 33166476 | 33166769 |
| chr9 | 33166007 | 33167341 | MTA2 | K-562 | 33166737 | 33167164 |
| chr9 | 33167547 | 33168227 | MTA2 | K-562,pre-B-cell | 33167549 | 33168092 |
| chr9 | 33167547 | 33168227 | MTA2 | pre-B-cell | 33167859 | 33168115 |
| chr9 | 33171080 | 33173880 | MTA2 | K-562 | 33172324 | 33172676 |
| chr9 | 33166007 | 33167341 | MTA3 | K-562 | 33166809 | 33167302 |
| chr9 | 33160973 | 33162071 | MTF2 | DU145 | 33161020 | 33161303 |
| chr9 | 33166007 | 33167341 | MXD4 | Hep-G2 | 33166232 | 33166490 |
| chr9 | 33171080 | 33173880 | MXD4 | Hep-G2 | 33172371 | 33172561 |
| chr9 | 33160973 | 33162071 | MXI1 | IMR-90,HeLa-S3 | 33161096 | 33161240 |
| chr9 | 33166007 | 33167341 | MXI1 | IMR-90 | 33166276 | 33166425 |
| chr9 | 33166007 | 33167341 | MXI1 | IMR-90,SK-N-SH,HeLa-S3,neural | 33167003 | 33167330 |
| chr9 | 33171080 | 33173880 | MXI1 | HeLa-S3 | 33172395 | 33172584 |
| chr9 | 33160973 | 33162071 | MYB | THP-1 | 33161047 | 33161294 |
| chr9 | 33166007 | 33167341 | MYB | GM12878 | 33166230 | 33166388 |
| chr9 | 33160973 | 33162071 | MYBL2 | A-673 | 33161678 | 33161995 |
| chr9 | 33166007 | 33167341 | MYBL2 | MCF-10A | 33166333 | 33166820 |
| chr9 | 33166007 | 33167341 | MYBL2 | A-673,Hep-G2 | 33166432 | 33167338 |
| chr9 | 33171080 | 33173880 | MYBL2 | Hep-G2 | 33172451 | 33173125 |
| chr9 | 33160973 | 33162071 | MYC | HeLa-S3,P493-6 | 33160976 | 33161234 |
| chr9 | 33160973 | 33162071 | MYC | MCF-10A,P493-6,GP5D | 33161244 | 33161720 |
| chr9 | 33160973 | 33162071 | MYC | DLD-1,LNCaP,MCF-7,GP5D | 33161552 | 33161943 |
| chr9 | 33166007 | 33167341 | MYC | K-562,SK-N-AS,U-87MG,LNCaP,P493-6 | 33166137 | 33166593 |
| chr9 | 33171080 | 33173880 | MYC | HeLa-S3,PAVE,K-562 | 33172405 | 33172618 |
| chr9 | 33160973 | 33162071 | MYCN | SHEP-21N,SH-EP,LNCaP | 33161027 | 33161270 |
| chr9 | 33160973 | 33162071 | MYCN | 22Rv1,LNCaP | 33161675 | 33161970 |
| chr9 | 33166007 | 33167341 | MYNN | K-562 | 33166990 | 33167103 |
| chr9 | 33160973 | 33162071 | MYOD1 | RD,myoblast,RH30 | 33161004 | 33161242 |
| chr9 | 33160973 | 33162071 | MYOD1 | RD | 33161612 | 33161793 |
| chr9 | 33167547 | 33168227 | MYOD1 | myoblast,rhabdomyosarcoma | 33167655 | 33167801 |
| chr9 | 33166007 | 33167341 | NANOG | WA01 | 33166913 | 33167311 |
| chr9 | 33160973 | 33162071 | NCOA1 | MCF-7 | 33161726 | 33161890 |
| chr9 | 33167547 | 33168227 | NCOA1 | K-562 | 33167619 | 33168179 |
| chr9 | 33171080 | 33173880 | NCOA1 | K-562 | 33172383 | 33172690 |
| chr9 | 33160973 | 33162071 | NCOA2 | MCF-7 | 33161598 | 33161873 |
| chr9 | 33160973 | 33162071 | NCOR1 | LS180 | 33161553 | 33161729 |
| chr9 | 33160973 | 33162071 | NCOR1 | LS180 | 33161690 | 33162000 |
| chr9 | 33166007 | 33167341 | NCOR1 | LS180 | 33166097 | 33166198 |
| chr9 | 33167547 | 33168227 | NCOR1 | K-562 | 33167699 | 33167961 |
| chr9 | 33171080 | 33173880 | NCOR1 | K-562,LS180 | 33172358 | 33172637 |
| chr9 | 33160973 | 33162071 | NCOR2 | LS180 | 33161601 | 33161824 |
| chr9 | 33166007 | 33167341 | NEUROD1 | D283-Med,K-562,D341-Med | 33166931 | 33167340 |
| chr9 | 33166007 | 33167341 | NEUROG2 | MRC-5 | 33166947 | 33167188 |
| chr9 | 33167547 | 33168227 | NEUROG2 | MRC-5 | 33167564 | 33167797 |
| chr9 | 33166007 | 33167341 | NFAT5 | Hep-G2 | 33166306 | 33166604 |
| chr9 | 33166007 | 33167341 | NFAT5 | Hep-G2 | 33166747 | 33167312 |
| chr9 | 33166007 | 33167341 | NFATC1 | HUVEC-C | 33166762 | 33167245 |
| chr9 | 33167547 | 33168227 | NFATC1 | HUVEC-C | 33167560 | 33167917 |
| chr9 | 33160973 | 33162071 | NFATC3 | GM12878 | 33160994 | 33161302 |
| chr9 | 33166007 | 33167341 | NFATC3 | GM12878 | 33166096 | 33166375 |
| chr9 | 33166007 | 33167341 | NFATC3 | Hep-G2 | 33166549 | 33166790 |
| chr9 | 33167547 | 33168227 | NFATC3 | GM12878 | 33167557 | 33167831 |
| chr9 | 33171080 | 33173880 | NFATC3 | K-562 | 33172279 | 33172613 |
| chr9 | 33166007 | 33167341 | NFE2 | erythroid | 33167068 | 33167138 |
| chr9 | 33171080 | 33173880 | NFE2 | ProEs | 33172321 | 33172512 |
| chr9 | 33171080 | 33173880 | NFE2 | K-562 | 33172462 | 33172679 |
| chr9 | 33160973 | 33162071 | NFE2L2 | IMR-90,HeLa-S3,BEAS-2B | 33160981 | 33161242 |
| chr9 | 33160973 | 33162071 | NFE2L2 | A-549 | 33161499 | 33161755 |
| chr9 | 33166007 | 33167341 | NFE2L2 | K-562,HeLa-S3 | 33167004 | 33167319 |
| chr9 | 33167547 | 33168227 | NFE2L2 | K-562,HeLa-S3 | 33167568 | 33167728 |
| chr9 | 33166007 | 33167341 | NFIA | K-562 | 33167096 | 33167340 |
| chr9 | 33160973 | 33162071 | NFIB | MCF-7 | 33161276 | 33161903 |
| chr9 | 33166007 | 33167341 | NFIB | MCF-7 | 33167079 | 33167332 |
| chr9 | 33160973 | 33162071 | NFIC | Ishikawa | 33161471 | 33161997 |
| chr9 | 33166007 | 33167341 | NFIC | K-562,Ishikawa,SK-N-SH | 33167049 | 33167331 |
| chr9 | 33171080 | 33173880 | NFIC | K-562 | 33172408 | 33172664 |
| chr9 | 33171080 | 33173880 | NFIC | Hep-G2 | 33172576 | 33173060 |
| chr9 | 33166007 | 33167341 | NFKB1 | HEK293T,L1236 | 33166412 | 33166914 |
| chr9 | 33166007 | 33167341 | NFKB1 | L1236 | 33166898 | 33167015 |
| chr9 | 33171080 | 33173880 | NFKB1 | MCF10A-Er-Src | 33171187 | 33171314 |
| chr9 | 33166007 | 33167341 | NFKB2 | L1236 | 33166679 | 33166776 |
| chr9 | 33160973 | 33162071 | NFKBIZ | Hep-G2 | 33161824 | 33161959 |
| chr9 | 33171080 | 33173880 | NFKBIZ | Hep-G2 | 33172310 | 33172518 |
| chr9 | 33171080 | 33173880 | NFKBIZ | Hep-G2 | 33172905 | 33173122 |
| chr9 | 33160973 | 33162071 | NFYB | HeLa-S3,Hep-G2 | 33161090 | 33161251 |
| chr9 | 33166007 | 33167341 | NFYB | Hep-G2 | 33167032 | 33167299 |
| chr9 | 33171080 | 33173880 | NFYB | Hep-G2 | 33171997 | 33172191 |
| chr9 | 33167547 | 33168227 | NKX2-5 | hESC | 33167645 | 33167863 |
| chr9 | 33166007 | 33167341 | NONO | K-562,Hep-G2 | 33166762 | 33167304 |
| chr9 | 33160973 | 33162071 | NR1H2 | HT29 | 33161066 | 33161455 |
| chr9 | 33160973 | 33162071 | NR1H2 | HT29 | 33161630 | 33162040 |
| chr9 | 33166007 | 33167341 | NR1H2 | HT29 | 33167102 | 33167287 |
| chr9 | 33171080 | 33173880 | NR2C2 | Hep-G2 | 33172508 | 33173092 |
| chr9 | 33166007 | 33167341 | NR2F1 | neuron-progenitor | 33166640 | 33167132 |
| chr9 | 33167547 | 33168227 | NR2F1 | GM12878 | 33167554 | 33167768 |
| chr9 | 33160973 | 33162071 | NR2F2 | K-562,MCF-7,liver | 33161071 | 33161297 |
| chr9 | 33160973 | 33162071 | NR2F2 | liver,MCF-7 | 33161610 | 33161928 |
| chr9 | 33166007 | 33167341 | NR2F2 | liver | 33166660 | 33166842 |
| chr9 | 33166007 | 33167341 | NR2F2 | MCF-7 | 33166842 | 33167298 |
| chr9 | 33171080 | 33173880 | NR2F2 | MCF-7,liver | 33172393 | 33172571 |
| chr9 | 33171080 | 33173880 | NR2F2 | Hep-G2,liver | 33172834 | 33173004 |
| chr9 | 33160973 | 33162071 | NR2F6 | K-562 | 33161143 | 33161282 |
| chr9 | 33166007 | 33167341 | NR2F6 | K-562 | 33166286 | 33166546 |
| chr9 | 33171080 | 33173880 | NR2F6 | Hep-G2 | 33172588 | 33173068 |
| chr9 | 33160973 | 33162071 | NR3C1 | BEAS-2B,Ishikawa,A-549,IMR-90,MDA-MB-231,SUM159PT | 33160973 | 33161454 |
| chr9 | 33160973 | 33162071 | NR3C1 | ZR751,HCC1937,LNCaP,Ishikawa,T47D-A1-2,A-549,MDA-MB-453,HCC70,MDA-MB-361,breast,MCF-7 | 33161592 | 33161983 |
| chr9 | 33166007 | 33167341 | NR3C1 | BEAS-2B | 33166091 | 33166318 |
| chr9 | 33166007 | 33167341 | NR3C1 | T47D-A1-2 | 33166260 | 33166425 |
| chr9 | 33167547 | 33168227 | NR3C1 | A-549 | 33167561 | 33167672 |
| chr9 | 33171080 | 33173880 | NR3C1 | K-562,MCF-7,BEAS-2B | 33172464 | 33172646 |
| chr9 | 33160973 | 33162071 | NR5A2 | MCF-7 | 33161629 | 33161885 |
| chr9 | 33167547 | 33168227 | NR5A2 | A-549 | 33167624 | 33167984 |
| chr9 | 33160973 | 33162071 | NRF1 | HeLa-S3 | 33161373 | 33161646 |
| chr9 | 33166007 | 33167341 | NRF1 | HeLa-S3 | 33166508 | 33166952 |
| chr9 | 33166007 | 33167341 | NRF1 | HMEC-1,HCC1954 | 33167041 | 33167189 |
| chr9 | 33160973 | 33162071 | NRIP1 | MCF-7 | 33161166 | 33161291 |
| chr9 | 33160973 | 33162071 | NRIP1 | MCF-7 | 33161576 | 33162019 |
| chr9 | 33166007 | 33167341 | OLIG2 | brain-prefrontal-cortex | 33166601 | 33166975 |
| chr9 | 33166007 | 33167341 | ONECUT2 | A-549 | 33166118 | 33166279 |
| chr9 | 33171080 | 33173880 | OVOL1 | MCF-7 | 33172452 | 33172659 |
| chr9 | 33160973 | 33162071 | PAX5 | NALM-6 | 33161100 | 33161301 |
| chr9 | 33160973 | 33162071 | PAX5 | GM12878 | 33161788 | 33161962 |
| chr9 | 33166007 | 33167341 | PAX5 | GM12878 | 33166343 | 33166623 |
| chr9 | 33166007 | 33167341 | PAX5 | GM12892 | 33166796 | 33166966 |
| chr9 | 33166007 | 33167341 | PAX5 | GM12878,GM12892,GM12891,NALM-6 | 33167114 | 33167326 |
| chr9 | 33171080 | 33173880 | PBX2 | K-562 | 33172435 | 33172658 |
| chr9 | 33167547 | 33168227 | PBX3 | GM12878 | 33167585 | 33167729 |
| chr9 | 33160973 | 33162071 | PGR | MCF-7,T-47D,breast | 33161132 | 33161345 |
| chr9 | 33160973 | 33162071 | PGR | T-47D-A,MCF-7,T-47D,AB32,breast,T-47D-B | 33161586 | 33162010 |
| chr9 | 33166007 | 33167341 | PGR | MCF-7,myometrium,breast,T-47D-A | 33166868 | 33167313 |
| chr9 | 33167547 | 33168227 | PGR | myometrium | 33167631 | 33167951 |
| chr9 | 33171080 | 33173880 | PGR | MCF-7,T-47D | 33172296 | 33172625 |
| chr9 | 33160973 | 33162071 | PHF21A | K-562 | 33161009 | 33161284 |
| chr9 | 33171080 | 33173880 | PHF21A | Hep-G2 | 33172536 | 33172845 |
| chr9 | 33166007 | 33167341 | PHF5A | Hep-G2 | 33167027 | 33167295 |
| chr9 | 33171080 | 33173880 | PHF5A | Hep-G2 | 33172460 | 33172748 |
| chr9 | 33166007 | 33167341 | PHF8 | Hep-G2,A-549,WA01,K-562 | 33166478 | 33167338 |
| chr9 | 33171080 | 33173880 | PHF8 | Hep-G2 | 33172826 | 33173092 |
| chr9 | 33160973 | 33162071 | PITX3 | SH-SY5Y | 33161496 | 33161876 |
| chr9 | 33166007 | 33167341 | PKNOX1 | GM12878 | 33166055 | 33166417 |
| chr9 | 33167547 | 33168227 | PKNOX1 | GM12878,K-562 | 33167638 | 33167934 |
| chr9 | 33171080 | 33173880 | PLAG1 | K-562 | 33172289 | 33172506 |
| chr9 | 33166007 | 33167341 | PML | MCF-7,K-562 | 33167078 | 33167330 |
| chr9 | 33160973 | 33162071 | POU2F1 | 22Rv1,T-47D | 33161482 | 33161896 |
| chr9 | 33167547 | 33168227 | POU2F2 | GM12891 | 33167559 | 33167723 |
| chr9 | 33160973 | 33162071 | POU5F1 | SKM-1 | 33161008 | 33161204 |
| chr9 | 33171080 | 33173880 | POU5F1 | hESC | 33172582 | 33172986 |
| chr9 | 33160973 | 33162071 | PPARG | HT29 | 33161110 | 33161372 |
| chr9 | 33160973 | 33162071 | PPARG | Hep-G2,HT29 | 33161690 | 33161931 |
| chr9 | 33166007 | 33167341 | PPARG | Hep-G2,HT29 | 33167026 | 33167330 |
| chr9 | 33171080 | 33173880 | PPARG | Hep-G2 | 33172382 | 33172633 |
| chr9 | 33171080 | 33173880 | PPARG | Hep-G2 | 33172796 | 33173020 |
| chr9 | 33166007 | 33167341 | PRDM10 | Hep-G2 | 33166283 | 33166591 |
| chr9 | 33166007 | 33167341 | PRDM10 | Hep-G2 | 33166746 | 33166876 |
| chr9 | 33171080 | 33173880 | PRDM10 | K-562 | 33172309 | 33172621 |
| chr9 | 33160973 | 33162071 | PRDM14 | hESC,NCCIT | 33161245 | 33161568 |
| chr9 | 33166007 | 33167341 | PRDM4 | HEK293 | 33167029 | 33167230 |
| chr9 | 33160973 | 33162071 | PROX1 | SW480 | 33161159 | 33161285 |
| chr9 | 33166007 | 33167341 | PSIP1 | T-REx-293 | 33166236 | 33166377 |
| chr9 | 33171080 | 33173880 | RAD51 | K-562 | 33172011 | 33172641 |
| chr9 | 33160973 | 33162071 | RARA | U-937 | 33161268 | 33161780 |
| chr9 | 33166007 | 33167341 | RB1 | K-562,GM12878,MCF-7 | 33166880 | 33167259 |
| chr9 | 33160973 | 33162071 | RBBP4 | RH5 | 33161023 | 33161274 |
| chr9 | 33166007 | 33167341 | RBBP4 | RH5 | 33166231 | 33166401 |
| chr9 | 33166007 | 33167341 | RBBP4 | SCMC | 33166423 | 33167160 |
| chr9 | 33167547 | 33168227 | RBBP4 | SCMC | 33167554 | 33167918 |
| chr9 | 33167547 | 33168227 | RBM14 | K-562 | 33167569 | 33167804 |
| chr9 | 33160973 | 33162071 | RELA | Detroit-562,THP-1,786-O,SW480,HAEC,HUVEC-C,FaDu,aortic-endothelial-cell,IMR-90 | 33161003 | 33161420 |
| chr9 | 33160973 | 33162071 | RELA | Detroit-562,SW480,786-O,LNCaP,HUVEC-C,SGBS,MCF-7 | 33161482 | 33161993 |
| chr9 | 33166007 | 33167341 | RELA | GM19099,LNCaP,HAEC,SGBS,GM12878,BJAB,K-562,aortic-endothelial-cell,HDF | 33166585 | 33166919 |
| chr9 | 33171080 | 33173880 | RELA | IMR-90,K-562,SGBS | 33171163 | 33171441 |
| chr9 | 33171080 | 33173880 | RELA | Detroit-562,SW480,HAEC,SGBS,HUVEC-C,FaDu,HeLa-B2,aortic-endothelial-cell | 33172224 | 33172673 |
| chr9 | 33171080 | 33173880 | RELA | HAEC | 33172772 | 33173029 |
| chr9 | 33160973 | 33162071 | RELB | GM12878 | 33160986 | 33161367 |
| chr9 | 33160973 | 33162071 | RELB | GM12878 | 33161645 | 33162036 |
| chr9 | 33166007 | 33167341 | RELB | GM12878 | 33166096 | 33166822 |
| chr9 | 33167547 | 33168227 | RELB | GM12878 | 33167579 | 33168016 |
| chr9 | 33160973 | 33162071 | REST | A-549 | 33161161 | 33161499 |
| chr9 | 33160973 | 33162071 | REST | A-549,Ishikawa,colorectal-cancer | 33161447 | 33161783 |
| chr9 | 33166007 | 33167341 | REST | CD4,K-562 | 33166842 | 33167164 |
| chr9 | 33171080 | 33173880 | REST | K-562,liver | 33172304 | 33172636 |
| chr9 | 33171080 | 33173880 | REST | Hep-G2,liver | 33172804 | 33172995 |
| chr9 | 33167547 | 33168227 | RFX1 | MCF-7,K-562 | 33167658 | 33167956 |
| chr9 | 33167547 | 33168227 | RFX3 | Hep-G2 | 33167597 | 33167870 |
| chr9 | 33160973 | 33162071 | RFX5 | HeLa-S3,IMR-90 | 33161084 | 33161276 |
| chr9 | 33166007 | 33167341 | RFX5 | HeLa-S3 | 33167127 | 33167255 |
| chr9 | 33171080 | 33173880 | RFX5 | HeLa-S3 | 33172496 | 33172610 |
| chr9 | 33166007 | 33167341 | RFXAP | Hep-G2 | 33166857 | 33167316 |
| chr9 | 33166007 | 33167341 | RLF | K-562 | 33166769 | 33167285 |
| chr9 | 33160973 | 33162071 | RNF2 | fibroblast | 33161033 | 33161306 |
| chr9 | 33166007 | 33167341 | RNF2 | fibroblast | 33166754 | 33166955 |
| chr9 | 33166007 | 33167341 | RNF2 | fibroblast,ME-1,WA09 | 33167032 | 33167316 |
| chr9 | 33160973 | 33162071 | RUNX1 | BCP-ALL,epididymis,SKH1,keratinocyte,MV4-11,MCF-10A | 33161044 | 33161311 |
| chr9 | 33166007 | 33167341 | RUNX1 | NB4 | 33166447 | 33166886 |
| chr9 | 33166007 | 33167341 | RUNX1 | VCaP,CD34,BCP-ALL,AML,epididymis,THP-1 | 33167003 | 33167328 |
| chr9 | 33160973 | 33162071 | RUNX1T1 | Kasumi-1 | 33161059 | 33161474 |
| chr9 | 33166007 | 33167341 | RUNX1T1 | Kasumi-1 | 33166843 | 33167042 |
| chr9 | 33166007 | 33167341 | RUNX1T1 | CD34 | 33166950 | 33167291 |
| chr9 | 33160973 | 33162071 | RUNX2 | SaOS-2 | 33161138 | 33161314 |
| chr9 | 33160973 | 33162071 | RUNX2 | LNCaP-C4-2B | 33161144 | 33161808 |
| chr9 | 33160973 | 33162071 | RUVBL2 | U2OS | 33161013 | 33161332 |
| chr9 | 33160973 | 33162071 | RUVBL2 | U2OS | 33161560 | 33162001 |
| chr9 | 33160973 | 33162071 | RXRA | JMSU-1,SK-N-SH | 33161022 | 33161428 |
| chr9 | 33160973 | 33162071 | RXRA | WA01 | 33161456 | 33161651 |
| chr9 | 33166007 | 33167341 | RXRA | JMSU-1 | 33166947 | 33167328 |
| chr9 | 33171080 | 33173880 | RXRA | Hep-G2 | 33172800 | 33173012 |
| chr9 | 33166007 | 33167341 | SALL2 | HEK293 | 33167078 | 33167307 |
| chr9 | 33166007 | 33167341 | SALL3 | hiPSC | 33166794 | 33167003 |
| chr9 | 33166007 | 33167341 | SALL3 | hiPSC | 33167090 | 33167313 |
| chr9 | 33166007 | 33167341 | SAP30 | K-562 | 33166982 | 33167241 |
| chr9 | 33167547 | 33168227 | SAP30 | K-562,WA01 | 33167798 | 33168003 |
| chr9 | 33160973 | 33162071 | SFMBT1 | HeLa | 33161282 | 33161585 |
| chr9 | 33160973 | 33162071 | SFPQ | LTAD | 33161360 | 33161831 |
| chr9 | 33160973 | 33162071 | SIN3A | A-549,SK-N-SH,MCF-7 | 33160976 | 33161339 |
| chr9 | 33160973 | 33162071 | SIN3A | MCF-7,HCT-116 | 33161648 | 33161995 |
| chr9 | 33166007 | 33167341 | SIN3A | A-549 | 33166039 | 33166280 |
| chr9 | 33166007 | 33167341 | SIN3A | HUVEC-C | 33166278 | 33166440 |
| chr9 | 33166007 | 33167341 | SIN3A | K-562 | 33166405 | 33166540 |
| chr9 | 33166007 | 33167341 | SIN3A | SK-N-SH | 33166604 | 33166911 |
| chr9 | 33171080 | 33173880 | SIN3A | MCF-7,A-549 | 33172475 | 33172722 |
| chr9 | 33166007 | 33167341 | SIN3B | Hep-G2 | 33167014 | 33167284 |
| chr9 | 33160973 | 33162071 | SIX1 | Hep-G2 | 33161851 | 33162009 |
| chr9 | 33171080 | 33173880 | SIX1 | Hep-G2 | 33172391 | 33172650 |
| chr9 | 33166007 | 33167341 | SIX5 | A-549 | 33166673 | 33166865 |
| chr9 | 33160973 | 33162071 | SKI | HL-60 | 33161056 | 33161335 |
| chr9 | 33171080 | 33173880 | SKI | Hep-G2 | 33172318 | 33172741 |
| chr9 | 33166007 | 33167341 | SKIL | GM12878 | 33166009 | 33166526 |
| chr9 | 33166007 | 33167341 | SKIL | K-562 | 33166929 | 33167285 |
| chr9 | 33160973 | 33162071 | SMAD1 | K-562 | 33161064 | 33161269 |
| chr9 | 33166007 | 33167341 | SMAD1 | K-562,Hep-G2 | 33166842 | 33167307 |
| chr9 | 33171080 | 33173880 | SMAD1 | Hep-G2 | 33172975 | 33173155 |
| chr9 | 33166007 | 33167341 | SMAD2 | hESC | 33166574 | 33166835 |
| chr9 | 33160973 | 33162071 | SMAD3 | MDA-MB-231,LX2,HMLE,H69,NCI-H441,SUM159PT,PC-3 | 33161036 | 33161455 |
| chr9 | 33160973 | 33162071 | SMAD3 | H69 | 33161846 | 33161963 |
| chr9 | 33166007 | 33167341 | SMAD3 | NCI-H441,Hep-G2,H69 | 33166296 | 33166602 |
| chr9 | 33171080 | 33173880 | SMAD3 | Hep-G2 | 33172387 | 33172616 |
| chr9 | 33160973 | 33162071 | SMAD4 | HGrC1,Caco-2 | 33161062 | 33161263 |
| chr9 | 33160973 | 33162071 | SMAD4 | Caco-2 | 33161741 | 33161941 |
| chr9 | 33167547 | 33168227 | SMAD4 | Hep-G2 | 33167565 | 33167740 |
| chr9 | 33166007 | 33167341 | SMAD5 | K-562 | 33166713 | 33166922 |
| chr9 | 33166007 | 33167341 | SMAD5 | K-562 | 33167058 | 33167319 |
| chr9 | 33160973 | 33162071 | SMARCA2 | NPC | 33161016 | 33161389 |
| chr9 | 33160973 | 33162071 | SMARCA4 | 22Rv1,MCF-7,HCT-116,501-mel,BT-16,CTV-1,K-562,BIN-67,Aska-SS,NPC,hiPSC,TTC-1240,A-549 | 33161100 | 33161560 |
| chr9 | 33166007 | 33167341 | SMARCA4 | NPC,TOV-21G,22Rv1,MCF-10A,HS-SY-2,NSC,MCF-7,CTV-1,K-562,Aska-SS,J-Lat,TTC-1240,hiPSC,NGP,A-549 | 33166764 | 33167328 |
| chr9 | 33171080 | 33173880 | SMARCA4 | MCF-7,BT-16,K-562,BIN-67,TTC-1240,hiPSC,endometrial-epithelial-cells,A-549 | 33172367 | 33172744 |
| chr9 | 33166007 | 33167341 | SMARCA5 | GM12878 | 33166246 | 33166442 |
| chr9 | 33166007 | 33167341 | SMARCA5 | MCF-7,GM12878,K-562 | 33166880 | 33167202 |
| chr9 | 33167547 | 33168227 | SMARCA5 | GM12878,K-562 | 33167578 | 33167902 |
| chr9 | 33166007 | 33167341 | SMARCB1 | hiPSC | 33166486 | 33166753 |
| chr9 | 33171080 | 33173880 | SMARCB1 | Hep-G2 | 33171827 | 33172125 |
| chr9 | 33171080 | 33173880 | SMARCB1 | MCF-7 | 33172377 | 33172792 |
| chr9 | 33171080 | 33173880 | SMARCB1 | Hep-G2 | 33172592 | 33173145 |
| chr9 | 33160973 | 33162071 | SMARCC1 | MCF-7,HCT-116,Hep-G2 | 33161582 | 33161916 |
| chr9 | 33166007 | 33167341 | SMARCC1 | hiPSC | 33166101 | 33166258 |
| chr9 | 33171080 | 33173880 | SMARCC1 | BIN-67,HeLa-S3,TTC-549,Hep-G2 | 33172398 | 33172809 |
| chr9 | 33171080 | 33173880 | SMARCC2 | K-562 | 33172352 | 33172660 |
| chr9 | 33160973 | 33162071 | SMARCD3 | MCF-7 | 33161632 | 33161922 |
| chr9 | 33166007 | 33167341 | SMARCD3 | MCF-7 | 33166948 | 33167276 |
| chr9 | 33160973 | 33162071 | SMARCE1 | MCF-7,K-562 | 33161013 | 33161440 |
| chr9 | 33160973 | 33162071 | SMARCE1 | MCF-7 | 33161594 | 33162039 |
| chr9 | 33166007 | 33167341 | SMARCE1 | K-562 | 33166230 | 33167134 |
| chr9 | 33166007 | 33167341 | SMARCE1 | MCF-7 | 33166854 | 33167284 |
| chr9 | 33171080 | 33173880 | SMARCE1 | MCF-7,K-562 | 33172308 | 33172766 |
| chr9 | 33166007 | 33167341 | SNAI2 | PC-9 | 33166406 | 33166746 |
| chr9 | 33166007 | 33167341 | SNAI2 | PC-9 | 33166865 | 33167208 |
| chr9 | 33171080 | 33173880 | SNAI2 | PC-9 | 33172329 | 33172674 |
| chr9 | 33171080 | 33173880 | SOX13 | Hep-G2 | 33172416 | 33172721 |
| chr9 | 33171080 | 33173880 | SOX13 | Hep-G2 | 33172844 | 33173005 |
| chr9 | 33160973 | 33162071 | SOX2 | TT,LK2 | 33161006 | 33161373 |
| chr9 | 33160973 | 33162071 | SOX2 | KNS-62,HCC95,LK2,HCC2814,TT | 33161624 | 33161995 |
| chr9 | 33160973 | 33162071 | SOX4 | MDA-MB-231 | 33161034 | 33161280 |
| chr9 | 33160973 | 33162071 | SOX4 | HCC1954 | 33161640 | 33161937 |
| chr9 | 33166007 | 33167341 | SOX4 | MRC-5 | 33166856 | 33167336 |
| chr9 | 33167547 | 33168227 | SOX4 | MRC-5 | 33167615 | 33167768 |
| chr9 | 33166007 | 33167341 | SOX6 | Hep-G2,K-562 | 33166944 | 33167324 |
| chr9 | 33171080 | 33173880 | SOX6 | Hep-G2,K-562 | 33172184 | 33172986 |
| chr9 | 33160973 | 33162071 | SOX9 | HT29 | 33161665 | 33161827 |
| chr9 | 33160973 | 33162071 | SP1 | A-549,HCT-116 | 33161584 | 33161966 |
| chr9 | 33166007 | 33167341 | SP1 | HEK293 | 33166838 | 33167028 |
| chr9 | 33167547 | 33168227 | SP1 | GM12878 | 33167858 | 33168070 |
| chr9 | 33171080 | 33173880 | SP1 | A-549,Hep-G2 | 33172456 | 33172672 |
| chr9 | 33171080 | 33173880 | SP1 | Hep-G2 | 33172750 | 33173051 |
| chr9 | 33160973 | 33162071 | SP2 | HEK293 | 33161060 | 33161303 |
| chr9 | 33166007 | 33167341 | SP2 | HEK293 | 33166438 | 33166691 |
| chr9 | 33166007 | 33167341 | SP3 | HEK293 | 33166764 | 33167322 |
| chr9 | 33166007 | 33167341 | SP7 | HEK293 | 33166782 | 33167288 |
| chr9 | 33160973 | 33162071 | SPDEF | MCF-7 | 33161611 | 33161996 |
| chr9 | 33166007 | 33167341 | SPDEF | MCF-7 | 33166804 | 33167315 |
| chr9 | 33171080 | 33173880 | SPDEF | MCF-7 | 33172417 | 33172807 |
| chr9 | 33160973 | 33162071 | SPI1 | primary-monocyte,THP-1 | 33161090 | 33161308 |
| chr9 | 33166007 | 33167341 | SPI1 | primary-monocyte,primary-neutrophil,NB4,CTV-1,THP-1 | 33166380 | 33166588 |
| chr9 | 33160973 | 33162071 | SRF | Ishikawa | 33161043 | 33161295 |
| chr9 | 33160973 | 33162071 | SRF | Ishikawa | 33161627 | 33161878 |
| chr9 | 33166007 | 33167341 | SRF | K-562 | 33166820 | 33166949 |
| chr9 | 33166007 | 33167341 | SRF | GM12878,K-562 | 33167152 | 33167321 |
| chr9 | 33171080 | 33173880 | SRF | Hep-G2 | 33172848 | 33172946 |
| chr9 | 33160973 | 33162071 | STAT1 | NCI-H358,CD14 | 33161125 | 33161328 |
| chr9 | 33160973 | 33162071 | STAT1 | NCI-H358 | 33161550 | 33162017 |
| chr9 | 33171080 | 33173880 | STAT1 | SET-2 | 33172289 | 33172600 |
| chr9 | 33160973 | 33162071 | STAT3 | HCC1187,A139,MDA-MB-231,HCC1937,MDA-MB-468,MDA-MB-157,MCF-7,MCF10A-Er-Src,HeLa-S3,MCF-10A,SUM159PT,T-47D,HCC1143,HCC70,A-137 | 33161055 | 33161387 |
| chr9 | 33160973 | 33162071 | STAT3 | HCC1187,BT-474,HCC1937,MDA-MB-468,MCF-7,MCF-10A,NCI-H358,T-47D,HCC1143,HCC70,MDA-MB-453 | 33161522 | 33161970 |
| chr9 | 33166007 | 33167341 | STAT3 | MDA-MB-157 | 33166288 | 33166591 |
| chr9 | 33171080 | 33173880 | STAT3 | HeLa-S3 | 33172421 | 33172605 |
| chr9 | 33166007 | 33167341 | SUPT16H | hiF-T | 33166349 | 33166819 |
| chr9 | 33160973 | 33162071 | SUPT5H | HCT-116,DLD-1,HeLa | 33160975 | 33161251 |
| chr9 | 33160973 | 33162071 | SUPT5H | DLD-1 | 33161548 | 33161784 |
| chr9 | 33167547 | 33168227 | SUPT5H | U2OS,DLD-1,HEK293,MOLT-4,HeLa | 33167554 | 33167765 |
| chr9 | 33171080 | 33173880 | SUPT5H | HeLa | 33172368 | 33172499 |
| chr9 | 33160973 | 33162071 | SUPT6H | HCT-116 | 33161319 | 33161531 |
| chr9 | 33166007 | 33167341 | SUZ12 | ProEs,hiPSC | 33166750 | 33167233 |
| chr9 | 33166007 | 33167341 | TAF15 | Hep-G2 | 33166765 | 33167304 |
| chr9 | 33160973 | 33162071 | TAF1 | Ishikawa | 33161690 | 33161876 |
| chr9 | 33166007 | 33167341 | TAF1 | K-562 | 33166325 | 33166459 |
| chr9 | 33166007 | 33167341 | TAF1 | HeLa-S3,Hep-G2 | 33166772 | 33166926 |
| chr9 | 33171080 | 33173880 | TAF1 | liver | 33172335 | 33172634 |
| chr9 | 33167547 | 33168227 | TAL1 | K-562 | 33167614 | 33167958 |
| chr9 | 33171080 | 33173880 | TAL1 | ProEs,HSPC-CD34pos,CD34,K-562 | 33172398 | 33172672 |
| chr9 | 33160973 | 33162071 | TARDBP | MCF-7 | 33161070 | 33161290 |
| chr9 | 33166007 | 33167341 | TARDBP | K-562 | 33166375 | 33166544 |
| chr9 | 33166007 | 33167341 | TARDBP | K-562 | 33166842 | 33167032 |
| chr9 | 33166007 | 33167341 | TARDBP | K-562,Hep-G2 | 33166955 | 33167292 |
| chr9 | 33167547 | 33168227 | TARDBP | K-562,Hep-G2,GM12878 | 33167608 | 33167907 |
| chr9 | 33160973 | 33162071 | TBP | HeLa-S3,GM12878 | 33161040 | 33161296 |
| chr9 | 33171080 | 33173880 | TBP | hESC,WA01,Hep-G2,K-562 | 33171790 | 33171966 |
| chr9 | 33171080 | 33173880 | TBP | HeLa-S3 | 33172301 | 33172613 |
| chr9 | 33171080 | 33173880 | TBP | Hep-G2 | 33172876 | 33173137 |
| chr9 | 33166007 | 33167341 | TBX21 | Th1,CD4 | 33167202 | 33167322 |
| chr9 | 33166007 | 33167341 | TBX2 | Hep-G2 | 33166305 | 33166673 |
| chr9 | 33171080 | 33173880 | TBX2 | Hep-G2 | 33172481 | 33173177 |
| chr9 | 33166007 | 33167341 | TBX5 | G296S,cardiomyocyte | 33166282 | 33166848 |
| chr9 | 33166007 | 33167341 | TBX5 | G296S | 33166799 | 33167029 |
| chr9 | 33166007 | 33167341 | TBX5 | cardiomyocyte | 33167099 | 33167295 |
| chr9 | 33160973 | 33162071 | TCF12 | A-549,MCF-7,Ishikawa | 33161419 | 33162026 |
| chr9 | 33166007 | 33167341 | TCF12 | GM12878 | 33166421 | 33166675 |
| chr9 | 33166007 | 33167341 | TCF12 | GM12878 | 33166793 | 33166891 |
| chr9 | 33171080 | 33173880 | TCF12 | K-562 | 33172379 | 33172694 |
| chr9 | 33171080 | 33173880 | TCF12 | Hep-G2 | 33172865 | 33173015 |
| chr9 | 33160973 | 33162071 | TCF3 | Kasumi-1 | 33161001 | 33161394 |
| chr9 | 33166007 | 33167341 | TCF3 | Kasumi-1 | 33166305 | 33166552 |
| chr9 | 33166007 | 33167341 | TCF3 | GM12878 | 33166926 | 33167334 |
| chr9 | 33171080 | 33173880 | TCF3 | K-562 | 33172397 | 33172678 |
| chr9 | 33160973 | 33162071 | TCF4 | LS180 | 33161696 | 33161906 |
| chr9 | 33171080 | 33173880 | TCF7 | Hep-G2 | 33172444 | 33172654 |
| chr9 | 33160973 | 33162071 | TCF7L2 | HeLa-S3,HCT-116,MDA-MB-453 | 33160983 | 33161408 |
| chr9 | 33160973 | 33162071 | TCF7L2 | MCF-7,HCT-116,LNCaP,MDA-MB-453 | 33161441 | 33162005 |
| chr9 | 33166007 | 33167341 | TCF7L2 | HCT-116,PANC-1,HeLa-S3 | 33166979 | 33167326 |
| chr9 | 33171080 | 33173880 | TCF7L2 | Hep-G2,HeLa-S3 | 33172418 | 33172675 |
| chr9 | 33171080 | 33173880 | TCF7L2 | Hep-G2 | 33172904 | 33173087 |
| chr9 | 33160973 | 33162071 | TEAD1 | HUCCT1,keratinocyte | 33161600 | 33161967 |
| chr9 | 33171080 | 33173880 | TEAD1 | keratinocyte,MSTO,H69,HUCCT1,pancreas,adipocyte | 33172409 | 33172652 |
| chr9 | 33160973 | 33162071 | TEAD4 | A-549,MDA-MB-231,SK-N-BE2,SK-N-SH,hMSC-TERT4,PC-9,SNU-216,HEK293,SK-MEL-147,MKN28,HCT-116,Ishikawa | 33160997 | 33161309 |
| chr9 | 33160973 | 33162071 | TEAD4 | HUCCT1,PC-9,MCF-7,SNU-216,T-47D,SK-MEL-147,HCT-116,Ishikawa | 33161630 | 33161948 |
| chr9 | 33166007 | 33167341 | TEAD4 | SK-MEL-147,Ishikawa | 33167142 | 33167323 |
| chr9 | 33167547 | 33168227 | TEAD4 | SK-MEL-147 | 33167590 | 33167722 |
| chr9 | 33171080 | 33173880 | TEAD4 | hMSC-TERT4,PC-9,MCF-7,SNU-216,Hep-G2,BJ,Ishikawa | 33172423 | 33172759 |
| chr9 | 33160973 | 33162071 | TFAP2A | WA09 | 33161092 | 33161314 |
| chr9 | 33160973 | 33162071 | TFAP2A | WA09 | 33161670 | 33161893 |
| chr9 | 33160973 | 33162071 | TFAP2C | UCLA1-hESCs,MCF-7,WA09,HCC1954 | 33161160 | 33161451 |
| chr9 | 33160973 | 33162071 | TFAP2C | MCF-7,WA09,HCC1954 | 33161682 | 33161970 |
| chr9 | 33160973 | 33162071 | TFAP4 | DLD-1,Hep-G2,LNCaP | 33161758 | 33162033 |
| chr9 | 33171080 | 33173880 | TFAP4 | Hep-G2 | 33172810 | 33172963 |
| chr9 | 33171080 | 33173880 | TFDP2 | Hep-G2 | 33172772 | 33173021 |
| chr9 | 33166007 | 33167341 | TFE3 | Hep-G2 | 33166406 | 33166713 |
| chr9 | 33166007 | 33167341 | TFE3 | Hep-G2 | 33166987 | 33167284 |
| chr9 | 33171080 | 33173880 | TFE3 | Hep-G2 | 33172794 | 33173025 |
| chr9 | 33171080 | 33173880 | THRB | Hep-G2 | 33172802 | 33173077 |
| chr9 | 33160973 | 33162071 | TLE3 | MCF-7 | 33161648 | 33161940 |
| chr9 | 33160973 | 33162071 | TP53 | SW480,MDA-MB-231,HCT-116 | 33161066 | 33161451 |
| chr9 | 33160973 | 33162071 | TP53 | MCF-7 | 33161659 | 33161923 |
| chr9 | 33166007 | 33167341 | TP53 | GM06170 | 33166253 | 33166494 |
| chr9 | 33166007 | 33167341 | TP53 | MDA-MB-231 | 33166486 | 33166842 |
| chr9 | 33166007 | 33167341 | TP53 | MCF-7,GM06170,IMR-90,lymphocyte,MDA-MB-231,GM00011 | 33166886 | 33167202 |
| chr9 | 33166007 | 33167341 | TRIM22 | GM12878 | 33166010 | 33166210 |
| chr9 | 33166007 | 33167341 | TRIM22 | GM12878 | 33166300 | 33167266 |
| chr9 | 33167547 | 33168227 | TRIM22 | GM12878 | 33167661 | 33168208 |
| chr9 | 33171080 | 33173880 | TRIM24 | K-562 | 33172368 | 33172674 |
| chr9 | 33160973 | 33162071 | TRIM28 | WIBR3 | 33161086 | 33161336 |
| chr9 | 33160973 | 33162071 | TRIM28 | WIBR3 | 33161811 | 33161959 |
| chr9 | 33166007 | 33167341 | TRIM28 | AF22,HCT-116 | 33166714 | 33167313 |
| chr9 | 33167547 | 33168227 | TRIM28 | AF22,hESC,HCT-116,K-562 | 33167615 | 33167915 |
| chr9 | 33160973 | 33162071 | TRPS1 | T-47D,MCF-7 | 33161661 | 33161968 |
| chr9 | 33166007 | 33167341 | TRPS1 | MCF-7 | 33167153 | 33167336 |
| chr9 | 33171080 | 33173880 | TRPS1 | MCF-7 | 33172386 | 33172659 |
| chr9 | 33167547 | 33168227 | TSHZ2 | SK-N-SH | 33167582 | 33167850 |
| chr9 | 33160973 | 33162071 | TWIST1 | SHEP-21N | 33161013 | 33161309 |
| chr9 | 33160973 | 33162071 | TWIST1 | SHEP-21N | 33161585 | 33161736 |
| chr9 | 33167547 | 33168227 | TWIST1 | BE2C,SK-N-BE2-C | 33167936 | 33168123 |
| chr9 | 33166007 | 33167341 | UBTF | GM12878,K-562 | 33166849 | 33167329 |
| chr9 | 33167547 | 33168227 | UBTF | K-562 | 33167728 | 33167834 |
| chr9 | 33160973 | 33162071 | USF1 | Ishikawa | 33161637 | 33161937 |
| chr9 | 33166007 | 33167341 | USF1 | Ishikawa,A-549 | 33167028 | 33167178 |
| chr9 | 33171080 | 33173880 | USF1 | WA01 | 33171134 | 33171271 |
| chr9 | 33171080 | 33173880 | USF1 | K-562,Hep-G2 | 33172276 | 33172468 |
| chr9 | 33160973 | 33162071 | USF2 | HeLa-S3 | 33160978 | 33161189 |
| chr9 | 33167547 | 33168227 | USF2 | IMR-90 | 33167646 | 33167789 |
| chr9 | 33171080 | 33173880 | USF2 | GM12878,HeLa-S3,Hep-G2,IMR-90 | 33172291 | 33172510 |
| chr9 | 33160973 | 33162071 | VDR | LX2 | 33160995 | 33161404 |
| chr9 | 33160973 | 33162071 | VDR | kidney-cortex,primary-prostate-epithelial-cell,LNCaP,LS180 | 33161517 | 33161962 |
| chr9 | 33166007 | 33167341 | VDR | kidney-cortex | 33166880 | 33167268 |
| chr9 | 33166007 | 33167341 | VDR | LX2 | 33167152 | 33167317 |
| chr9 | 33167547 | 33168227 | VDR | THP-1,kidney-cortex | 33167554 | 33167803 |
| chr9 | 33171080 | 33173880 | VDR | kidney-cortex | 33172359 | 33173292 |
| chr9 | 33160973 | 33162071 | WDHD1 | MCF-7 | 33161743 | 33161944 |
| chr9 | 33160973 | 33162071 | XBP1 | LNCaP | 33161681 | 33161930 |
| chr9 | 33166007 | 33167341 | XBP1 | LNCaP | 33166911 | 33167295 |
| chr9 | 33160973 | 33162071 | XRCC5 | K-562 | 33161141 | 33161287 |
| chr9 | 33167547 | 33168227 | XRCC5 | K-562 | 33167577 | 33167819 |
| chr9 | 33160973 | 33162071 | YY1 | SK-N-SH,Ishikawa,HCT-116,A-549,Hep-G2,GM12891 | 33161020 | 33161256 |
| chr9 | 33160973 | 33162071 | YY1 | Ishikawa,HCT-116 | 33161624 | 33161884 |
| chr9 | 33166007 | 33167341 | YY1 | HEK293,SK-N-SH,Ishikawa,HCT-116,A-549,GM12892,Hep-G2,K-562,liver,GM12891,WA01 | 33166906 | 33167325 |
| chr9 | 33171080 | 33173880 | YY1 | liver | 33171727 | 33171906 |
| chr9 | 33171080 | 33173880 | YY1 | Hep-G2,liver | 33172380 | 33172664 |
| chr9 | 33171080 | 33173880 | YY1 | liver | 33172768 | 33173144 |
| chr9 | 33166007 | 33167341 | ZBTB10 | HEK293 | 33166649 | 33167180 |
| chr9 | 33160973 | 33162071 | ZBTB12 | HEK293 | 33161110 | 33161306 |
| chr9 | 33167547 | 33168227 | ZBTB16 | KG-1 | 33167568 | 33167770 |
| chr9 | 33166007 | 33167341 | ZBTB20 | HEK293 | 33166362 | 33167289 |
| chr9 | 33166007 | 33167341 | ZBTB26 | HEK293 | 33166983 | 33167209 |
| chr9 | 33167547 | 33168227 | ZBTB2 | K-562 | 33167562 | 33167864 |
| chr9 | 33171080 | 33173880 | ZBTB2 | K-562 | 33172374 | 33172718 |
| chr9 | 33160973 | 33162071 | ZBTB33 | A-549 | 33161013 | 33161165 |
| chr9 | 33160973 | 33162071 | ZBTB33 | HCT-116 | 33161158 | 33161283 |
| chr9 | 33171080 | 33173880 | ZBTB33 | liver | 33172316 | 33172644 |
| chr9 | 33171080 | 33173880 | ZBTB33 | liver | 33172777 | 33173020 |
| chr9 | 33166007 | 33167341 | ZBTB40 | GM12878 | 33166369 | 33166755 |
| chr9 | 33171080 | 33173880 | ZBTB40 | K-562 | 33171628 | 33172087 |
| chr9 | 33171080 | 33173880 | ZBTB40 | K-562 | 33172319 | 33172771 |
| chr9 | 33166007 | 33167341 | ZBTB6 | HEK293 | 33167067 | 33167250 |
| chr9 | 33160973 | 33162071 | ZBTB7A | VCaP,Ishikawa | 33161388 | 33161742 |
| chr9 | 33166007 | 33167341 | ZBTB7A | Ishikawa,K-562,VCaP | 33166529 | 33166759 |
| chr9 | 33171080 | 33173880 | ZBTB7A | Hep-G2 | 33172858 | 33172951 |
| chr9 | 33171080 | 33173880 | ZBTB7A | K-562 | 33172933 | 33173032 |
| chr9 | 33171080 | 33173880 | ZBTB7B | Hep-G2 | 33172400 | 33172715 |
| chr9 | 33171080 | 33173880 | ZBTB7B | Hep-G2 | 33172855 | 33173067 |
| chr9 | 33166007 | 33167341 | ZFP36 | K-562 | 33166395 | 33166529 |
| chr9 | 33166007 | 33167341 | ZFP36 | Hep-G2,GM12878,A-549,K-562,HeLa-S3 | 33166782 | 33167232 |
| chr9 | 33171080 | 33173880 | ZFP36 | K-562 | 33172333 | 33172512 |
| chr9 | 33166007 | 33167341 | ZFP37 | Hep-G2 | 33166398 | 33166526 |
| chr9 | 33166007 | 33167341 | ZFP37 | HEK293 | 33166844 | 33167159 |
| chr9 | 33171080 | 33173880 | ZFP42 | HEK293 | 33171204 | 33171382 |
| chr9 | 33167547 | 33168227 | ZFP57 | hESC | 33167811 | 33168009 |
| chr9 | 33166007 | 33167341 | ZFP64 | HEK293 | 33166341 | 33167009 |
| chr9 | 33166007 | 33167341 | ZFP64 | Hep-G2 | 33166406 | 33166608 |
| chr9 | 33166007 | 33167341 | ZFP64 | Hep-G2 | 33166749 | 33167214 |
| chr9 | 33166007 | 33167341 | ZFP91 | K-562 | 33166876 | 33167334 |
| chr9 | 33166007 | 33167341 | ZFX | LNCaP-C4-2B,MCF-7,NOMO1,PrEC,HCT-116,K-562 | 33166568 | 33167184 |
| chr9 | 33167547 | 33168227 | ZFX | DAOY,MCF-7,NOMO1,PrEC,HCT-116,K-562 | 33167553 | 33167926 |
| chr9 | 33166007 | 33167341 | ZHX1 | HeLa-S3 | 33167154 | 33167328 |
| chr9 | 33167547 | 33168227 | ZHX1 | HeLa-S3 | 33167708 | 33167877 |
| chr9 | 33171080 | 33173880 | ZHX1 | HeLa-S3 | 33172503 | 33172620 |
| chr9 | 33160973 | 33162071 | ZHX2 | MCF-7 | 33161733 | 33161955 |
| chr9 | 33166007 | 33167341 | ZKSCAN1 | K-562 | 33166357 | 33166474 |
| chr9 | 33166007 | 33167341 | ZKSCAN1 | K-562 | 33166915 | 33167293 |
| chr9 | 33167547 | 33168227 | ZKSCAN1 | K-562,Hep-G2 | 33167593 | 33167744 |
| chr9 | 33160973 | 33162071 | ZMYND11 | HeLa | 33161137 | 33161251 |
| chr9 | 33160973 | 33162071 | ZMYND11 | HeLa | 33161493 | 33161661 |
| chr9 | 33166007 | 33167341 | ZMYND11 | HeLa | 33166652 | 33166874 |
| chr9 | 33166007 | 33167341 | ZMYND11 | HeLa | 33166954 | 33167070 |
| chr9 | 33166007 | 33167341 | ZNF12 | Hep-G2 | 33166994 | 33167108 |
| chr9 | 33166007 | 33167341 | ZNF12 | K-562 | 33167082 | 33167279 |
| chr9 | 33171080 | 33173880 | ZNF12 | Hep-G2 | 33172826 | 33172995 |
| chr9 | 33160973 | 33162071 | ZNF133 | HEK293T | 33161095 | 33161254 |
| chr9 | 33160973 | 33162071 | ZNF133 | HEK293T | 33161798 | 33161907 |
| chr9 | 33166007 | 33167341 | ZNF142 | Hep-G2 | 33166958 | 33167313 |
| chr9 | 33166007 | 33167341 | ZNF143 | Hep-G2 | 33166381 | 33166545 |
| chr9 | 33166007 | 33167341 | ZNF143 | GM12878,WA09,Hep-G2,WA01 | 33166884 | 33167271 |
| chr9 | 33166007 | 33167341 | ZNF146 | HEK293 | 33166954 | 33167179 |
| chr9 | 33160973 | 33162071 | ZNF175 | Hep-G2 | 33161825 | 33161997 |
| chr9 | 33166007 | 33167341 | ZNF175 | Hep-G2 | 33167143 | 33167329 |
| chr9 | 33171080 | 33173880 | ZNF175 | Hep-G2 | 33172552 | 33172706 |
| chr9 | 33171080 | 33173880 | ZNF175 | Hep-G2 | 33172806 | 33173080 |
| chr9 | 33167547 | 33168227 | ZNF184 | K-562 | 33167640 | 33167907 |
| chr9 | 33171080 | 33173880 | ZNF184 | K-562 | 33172315 | 33172550 |
| chr9 | 33160973 | 33162071 | ZNF189 | HEK293 | 33160976 | 33161383 |
| chr9 | 33167547 | 33168227 | ZNF18 | GM12878 | 33167648 | 33167874 |
| chr9 | 33167547 | 33168227 | ZNF202 | HEK293T | 33167630 | 33167775 |
| chr9 | 33167547 | 33168227 | ZNF205 | HEK293T | 33167772 | 33168067 |
| chr9 | 33166007 | 33167341 | ZNF207 | GM12878 | 33166905 | 33167198 |
| chr9 | 33160973 | 33162071 | ZNF217 | MCF-7 | 33161301 | 33162031 |
| chr9 | 33166007 | 33167341 | ZNF217 | MCF-7,GM12878,Hep-G2 | 33166758 | 33167231 |
| chr9 | 33171080 | 33173880 | ZNF217 | Hep-G2 | 33172391 | 33173123 |
| chr9 | 33166007 | 33167341 | ZNF232 | Hep-G2 | 33166988 | 33167278 |
| chr9 | 33160973 | 33162071 | ZNF24 | HEK293 | 33161097 | 33161399 |
| chr9 | 33160973 | 33162071 | ZNF24 | MCF-7 | 33161641 | 33162054 |
| chr9 | 33166007 | 33167341 | ZNF24 | MCF-7,HEK293 | 33166019 | 33166550 |
| chr9 | 33166007 | 33167341 | ZNF24 | HEK293,MCF-7,K-562 | 33166822 | 33167214 |
| chr9 | 33167547 | 33168227 | ZNF24 | K-562 | 33167571 | 33168180 |
| chr9 | 33171080 | 33173880 | ZNF24 | K-562 | 33172285 | 33172684 |
| chr9 | 33166007 | 33167341 | ZNF256 | Hep-G2 | 33166981 | 33167157 |
| chr9 | 33160973 | 33162071 | ZNF263 | Hep-G2 | 33161770 | 33162039 |
| chr9 | 33167547 | 33168227 | ZNF263 | K-562 | 33167876 | 33168096 |
| chr9 | 33171080 | 33173880 | ZNF263 | Hep-G2 | 33171778 | 33171900 |
| chr9 | 33171080 | 33173880 | ZNF263 | Hep-G2 | 33172564 | 33172876 |
| chr9 | 33166007 | 33167341 | ZNF273 | HEK293T | 33166824 | 33167302 |
| chr9 | 33171080 | 33173880 | ZNF276 | Hep-G2 | 33172934 | 33173119 |
| chr9 | 33166007 | 33167341 | ZNF281 | K-562 | 33166390 | 33166646 |
| chr9 | 33166007 | 33167341 | ZNF2 | HEK293 | 33166853 | 33167271 |
| chr9 | 33167547 | 33168227 | ZNF2 | HEK293 | 33167550 | 33167853 |
| chr9 | 33166007 | 33167341 | ZNF324 | HEK293 | 33166783 | 33167185 |
| chr9 | 33166007 | 33167341 | ZNF337 | Hep-G2 | 33167019 | 33167218 |
| chr9 | 33160973 | 33162071 | ZNF341 | HEK293 | 33161010 | 33161268 |
| chr9 | 33166007 | 33167341 | ZNF341 | HEK293 | 33166429 | 33167034 |
| chr9 | 33167547 | 33168227 | ZNF341 | HEK293 | 33167570 | 33167842 |
| chr9 | 33166007 | 33167341 | ZNF343 | HEK293T | 33167038 | 33167287 |
| chr9 | 33160973 | 33162071 | ZNF350 | HEK293 | 33161077 | 33161245 |
| chr9 | 33160973 | 33162071 | ZNF35 | HEK293 | 33161048 | 33161196 |
| chr9 | 33171080 | 33173880 | ZNF384 | Hep-G2 | 33172726 | 33172983 |
| chr9 | 33160973 | 33162071 | ZNF398 | HEK293 | 33160992 | 33161255 |
| chr9 | 33160973 | 33162071 | ZNF398 | BG01V | 33161197 | 33161355 |
| chr9 | 33166007 | 33167341 | ZNF3 | K-562 | 33166748 | 33167122 |
| chr9 | 33171080 | 33173880 | ZNF3 | Hep-G2 | 33172841 | 33173036 |
| chr9 | 33171080 | 33173880 | ZNF407 | Hep-G2 | 33172959 | 33173164 |
| chr9 | 33166007 | 33167341 | ZNF436 | HEK293,K-562 | 33166848 | 33167078 |
| chr9 | 33166007 | 33167341 | ZNF449 | HEK293 | 33166769 | 33167284 |
| chr9 | 33171080 | 33173880 | ZNF449 | HEK293 | 33172759 | 33173176 |
| chr9 | 33166007 | 33167341 | ZNF44 | Hep-G2 | 33166280 | 33166478 |
| chr9 | 33166007 | 33167341 | ZNF44 | Hep-G2 | 33166588 | 33167019 |
| chr9 | 33171080 | 33173880 | ZNF44 | Hep-G2 | 33172486 | 33172714 |
| chr9 | 33171080 | 33173880 | ZNF44 | Hep-G2 | 33172902 | 33173159 |
| chr9 | 33166007 | 33167341 | ZNF467 | HEK293 | 33166248 | 33166411 |
| chr9 | 33166007 | 33167341 | ZNF467 | HEK293 | 33167153 | 33167321 |
| chr9 | 33166007 | 33167341 | ZNF479 | HEK293T | 33166272 | 33166388 |
| chr9 | 33166007 | 33167341 | ZNF501 | HEK293 | 33166808 | 33167173 |
| chr9 | 33171080 | 33173880 | ZNF501 | Hep-G2 | 33172568 | 33172825 |
| chr9 | 33171080 | 33173880 | ZNF507 | K-562 | 33172281 | 33172610 |
| chr9 | 33166007 | 33167341 | ZNF519 | HEK293T | 33166834 | 33166941 |
| chr9 | 33166007 | 33167341 | ZNF550 | Hep-G2 | 33166407 | 33166614 |
| chr9 | 33166007 | 33167341 | ZNF550 | Hep-G2 | 33167053 | 33167289 |
| chr9 | 33171080 | 33173880 | ZNF550 | Hep-G2 | 33172981 | 33173150 |
| chr9 | 33166007 | 33167341 | ZNF580 | HEK293 | 33166971 | 33167231 |
| chr9 | 33167547 | 33168227 | ZNF592 | K-562,MCF-7 | 33167578 | 33167854 |
| chr9 | 33171080 | 33173880 | ZNF592 | K-562 | 33172327 | 33172695 |
| chr9 | 33160973 | 33162071 | ZNF639 | HEK293 | 33161026 | 33161416 |
| chr9 | 33167547 | 33168227 | ZNF639 | K-562 | 33167552 | 33167854 |
| chr9 | 33166007 | 33167341 | ZNF76 | HEK293 | 33166932 | 33167215 |
| chr9 | 33166007 | 33167341 | ZNF92 | retina | 33166825 | 33167105 |
| chr9 | 33160973 | 33162071 | ZNF93 | HEK293T | 33161861 | 33162007 |
| chr9 | 33171080 | 33173880 | ZSCAN4 | HEK293 | 33173445 | 33173774 |