| SE element chr | SE element start | SE element start | TF | TF biosample name | TF end | TF start |
|---|---|---|---|---|---|---|
| chr9 | 98781965 | 98790676 | AFF4 | HeLa | 98782117 | 98782264 |
| chr9 | 98781965 | 98790676 | AFF4 | HeLa | 98789957 | 98790106 |
| chr9 | 98790767 | 98792591 | AFF4 | HeLa | 98791243 | 98791449 |
| chr9 | 98793980 | 98796321 | AFF4 | HeLa | 98796038 | 98796294 |
| chr9 | 98781965 | 98790676 | APC | HCT-116 | 98781975 | 98782297 |
| chr9 | 98790767 | 98792591 | APC | HCT-116 | 98791385 | 98791640 |
| chr9 | 98793980 | 98796321 | APC | HCT-116 | 98795960 | 98796285 |
| chr9 | 98781965 | 98790676 | AR | DU145 | 98782037 | 98782169 |
| chr9 | 98781965 | 98790676 | AR | prostate,MDA-MB-453 | 98783866 | 98784066 |
| chr9 | 98781965 | 98790676 | AR | prostate,myofibroblast | 98790092 | 98790583 |
| chr9 | 98790767 | 98792591 | AR | prostate,epididymis,endometrial-stromal-cell,VCaP,LNCaP,prostate-cancer | 98791214 | 98791382 |
| chr9 | 98790767 | 98792591 | AR | LNCaP | 98791427 | 98791590 |
| chr9 | 98790767 | 98792591 | AR | prostate | 98791492 | 98791804 |
| chr9 | 98790767 | 98792591 | AR | MCF-7 | 98792118 | 98792292 |
| chr9 | 98790767 | 98792591 | ARID1A | RMG-I,endometrial-epithelial-cells,12Z,MCF-7 | 98791020 | 98791515 |
| chr9 | 98790767 | 98792591 | ARID1A | RMG-I,endometrial-epithelial-cells | 98791539 | 98792144 |
| chr9 | 98793980 | 98796321 | ARID1A | RMG-I | 98794389 | 98794576 |
| chr9 | 98781965 | 98790676 | ARID1B | K-562 | 98781990 | 98782231 |
| chr9 | 98790767 | 98792591 | ARID1B | K-562 | 98791163 | 98791542 |
| chr9 | 98790767 | 98792591 | ARID3A | K-562 | 98791284 | 98791415 |
| chr9 | 98790767 | 98792591 | ARNT | RCC4 | 98790919 | 98791105 |
| chr9 | 98790767 | 98792591 | ARNT | MCF-7,SK-MEL-28,K-562 | 98791156 | 98791421 |
| chr9 | 98781965 | 98790676 | ARNTL | U2OS | 98782092 | 98782301 |
| chr9 | 98781965 | 98790676 | ARNTL | NSC | 98790160 | 98790527 |
| chr9 | 98790767 | 98792591 | ARNTL | U2OS | 98790955 | 98791234 |
| chr9 | 98790767 | 98792591 | ASH2L | WA01 | 98791025 | 98791712 |
| chr9 | 98793980 | 98796321 | ASH2L | WA01,GM12878,Hep-G2 | 98795816 | 98796253 |
| chr9 | 98790767 | 98792591 | ATF1 | K-562 | 98790973 | 98791621 |
| chr9 | 98790767 | 98792591 | ATF2 | WA01 | 98791225 | 98791566 |
| chr9 | 98781965 | 98790676 | ATF3 | HCT-116 | 98782023 | 98782311 |
| chr9 | 98790767 | 98792591 | ATF3 | K-562,primary-dermal-fibroblasts,HCT-116,Hep-G2,WA01 | 98791255 | 98791464 |
| chr9 | 98793980 | 98796321 | ATF3 | Hep-G2 | 98796108 | 98796276 |
| chr9 | 98790767 | 98792591 | ATF7 | K-562 | 98791152 | 98791660 |
| chr9 | 98781965 | 98790676 | BACH1 | AsPC-1 | 98782037 | 98782216 |
| chr9 | 98793980 | 98796321 | BACH1 | WA01 | 98796120 | 98796297 |
| chr9 | 98790767 | 98792591 | BATF | GM12878 | 98791289 | 98791377 |
| chr9 | 98781965 | 98790676 | BCL11A | HUDEP-2 | 98790016 | 98790306 |
| chr9 | 98790767 | 98792591 | BCL11A | CD34,GM12878,HUDEP-2 | 98791201 | 98791374 |
| chr9 | 98790767 | 98792591 | BCL11B | HEK293,thymus | 98791206 | 98791408 |
| chr9 | 98793980 | 98796321 | BCL11B | thymus | 98795995 | 98796261 |
| chr9 | 98790767 | 98792591 | BCL6 | OCI-Ly1 | 98791221 | 98791395 |
| chr9 | 98793980 | 98796321 | BCL6 | OCI-Ly1 | 98795677 | 98795868 |
| chr9 | 98793980 | 98796321 | BCL6 | CD4,B-cell,OCI-Ly1 | 98795999 | 98796251 |
| chr9 | 98781965 | 98790676 | BCLAF1 | K-562 | 98789780 | 98790170 |
| chr9 | 98781965 | 98790676 | BCOR | K-562 | 98788672 | 98788904 |
| chr9 | 98790767 | 98792591 | BCOR | K-562 | 98791247 | 98791620 |
| chr9 | 98793980 | 98796321 | BCOR | K-562 | 98795206 | 98795619 |
| chr9 | 98790767 | 98792591 | BRCA1 | MCF-10A | 98791207 | 98791532 |
| chr9 | 98793980 | 98796321 | BRCA1 | SH-EP | 98796092 | 98796171 |
| chr9 | 98781965 | 98790676 | BRD1 | HUES-64 | 98785444 | 98785780 |
| chr9 | 98793980 | 98796321 | BRD1 | RKO,HUES-64 | 98795370 | 98795844 |
| chr9 | 98793980 | 98796321 | BRD7 | SUM159PT | 98796077 | 98796281 |
| chr9 | 98790767 | 98792591 | CBFA2T3 | K-562 | 98791169 | 98791438 |
| chr9 | 98781965 | 98790676 | CBFB | ME-1 | 98790109 | 98790436 |
| chr9 | 98790767 | 98792591 | CBFB | SaOS-2,Hep-G2,GM12878 | 98791151 | 98791455 |
| chr9 | 98793980 | 98796321 | CBFB | ME-1 | 98795947 | 98796208 |
| chr9 | 98781965 | 98790676 | CBX3 | HCT-116 | 98782067 | 98782282 |
| chr9 | 98781965 | 98790676 | CDC5L | K-562 | 98789676 | 98789904 |
| chr9 | 98793980 | 98796321 | CDC5L | K-562 | 98795307 | 98795570 |
| chr9 | 98781965 | 98790676 | CDX2 | LS180 | 98782480 | 98782613 |
| chr9 | 98790767 | 98792591 | CDX2 | LS180 | 98791233 | 98791375 |
| chr9 | 98781965 | 98790676 | CEBPA | Kasumi-1,U-937,THP-1 | 98782433 | 98782654 |
| chr9 | 98781965 | 98790676 | CEBPA | U-937 | 98783675 | 98783873 |
| chr9 | 98781965 | 98790676 | CEBPA | Hep-G2,MV4-11,THP-1 | 98786888 | 98787178 |
| chr9 | 98790767 | 98792591 | CEBPA | Kasumi-1,SKH1,liver,MV4-11,T-47D,THP-1 | 98791205 | 98791389 |
| chr9 | 98781965 | 98790676 | CEBPB | monocyte,MV4-11 | 98782428 | 98782635 |
| chr9 | 98781965 | 98790676 | CEBPB | K-562,MV4-11,Ishikawa,MCF-7,THP-1,WA01,A-549,Hep-G2 | 98786929 | 98787142 |
| chr9 | 98781965 | 98790676 | CEBPB | MCF-7 | 98787225 | 98787372 |
| chr9 | 98790767 | 98792591 | CEBPB | K-562,HFOB,hMSC,MV4-11,HCT-116,HL-60,MCF-7,monocyte,THP-1,WA01,A-549,Hep-G2 | 98791169 | 98791413 |
| chr9 | 98781965 | 98790676 | CEBPD | HAEC | 98786977 | 98787214 |
| chr9 | 98781965 | 98790676 | CEBPD | K-562 | 98789926 | 98790158 |
| chr9 | 98790767 | 98792591 | CEBPD | HAEC | 98791168 | 98791350 |
| chr9 | 98790767 | 98792591 | CEBPG | K-562 | 98791104 | 98791523 |
| chr9 | 98781965 | 98790676 | CHD1 | HeLa-S3 | 98783875 | 98784029 |
| chr9 | 98781965 | 98790676 | CHD1 | hMSC-TERT | 98788216 | 98788420 |
| chr9 | 98781965 | 98790676 | CHD1 | hMSC-TERT | 98790172 | 98790390 |
| chr9 | 98790767 | 98792591 | CHD1 | HeLa-S3 | 98791176 | 98791388 |
| chr9 | 98793980 | 98796321 | CHD1 | WA01 | 98795826 | 98796006 |
| chr9 | 98781965 | 98790676 | CHD2 | HeLa-S3 | 98782069 | 98782302 |
| chr9 | 98790767 | 98792591 | CHD2 | WA01,HeLa-S3,SK-N-SH | 98791237 | 98791395 |
| chr9 | 98793980 | 98796321 | CHD2 | HeLa-S3 | 98796103 | 98796234 |
| chr9 | 98781965 | 98790676 | CHD4 | HaCaT | 98782035 | 98782289 |
| chr9 | 98781965 | 98790676 | CHD4 | SCMC | 98783870 | 98784419 |
| chr9 | 98781965 | 98790676 | CHD4 | SCMC | 98784869 | 98785180 |
| chr9 | 98781965 | 98790676 | CHD4 | SCMC | 98785350 | 98786031 |
| chr9 | 98781965 | 98790676 | CHD4 | SCMC | 98789880 | 98790089 |
| chr9 | 98790767 | 98792591 | CHD4 | keratinocyte | 98790768 | 98790970 |
| chr9 | 98790767 | 98792591 | CHD4 | SCMC | 98791016 | 98791550 |
| chr9 | 98781965 | 98790676 | CLOCK | BA10 | 98788845 | 98788991 |
| chr9 | 98781965 | 98790676 | CREB1 | K-562 | 98789824 | 98790026 |
| chr9 | 98790767 | 98792591 | CREB1 | A-549,WA01,MCF-7,GM23338,LNCaP-abl | 98791225 | 98791480 |
| chr9 | 98793980 | 98796321 | CREB1 | WA01 | 98796111 | 98796253 |
| chr9 | 98781965 | 98790676 | CREBBP | NCI-H3396 | 98785279 | 98785500 |
| chr9 | 98781965 | 98790676 | CREBBP | keratinocyte | 98787164 | 98787437 |
| chr9 | 98790767 | 98792591 | CREBBP | MCF-7,fibroblast,keratinocyte | 98791162 | 98791439 |
| chr9 | 98781965 | 98790676 | CREM | K-562 | 98790019 | 98790174 |
| chr9 | 98790767 | 98792591 | CREM | K-562 | 98791229 | 98791390 |
| chr9 | 98781965 | 98790676 | CTBP1 | K-562 | 98781981 | 98782267 |
| chr9 | 98790767 | 98792591 | CTBP1 | MCF-7,K-562 | 98791134 | 98791651 |
| chr9 | 98781965 | 98790676 | CTCF | prostate,RWPE-2,Peyers-patch,primary-epidermal-keratinocyte,keratinocyte | 98782182 | 98782473 |
| chr9 | 98781965 | 98790676 | CTCF | RH4,anterior-temporal-cortex | 98783978 | 98784224 |
| chr9 | 98781965 | 98790676 | CTCF | RH4,786-O,neuron | 98785569 | 98785813 |
| chr9 | 98781965 | 98790676 | CTCF | HeLa-S3 | 98786252 | 98786480 |
| chr9 | 98781965 | 98790676 | CTCF | keratinocyte | 98788663 | 98788827 |
| chr9 | 98781965 | 98790676 | CTCF | keratinocyte,T-47D,neutrophil | 98790212 | 98790458 |
| chr9 | 98781965 | 98790676 | CTCF | peripheral-blood-neutrophil | 98790446 | 98790618 |
| chr9 | 98790767 | 98792591 | CTCF | DND41 | 98790866 | 98790984 |
| chr9 | 98790767 | 98792591 | CTCF | DU145,gastrocnemius-medialis,Hep-G2,A-549,Kelly,GM04648,NB69,monocyte,RWPE-1,omental-fat-pad,hepatocyte,DOHH2,VCaP,cardiac-muscle,HT-1080,keratinocyte,astrocyte,lymphoblast,IMR-5,SiHa,SK-N-SH,primary-epidermal-keratinocyte,MCF-7L,ID00016,HSPC-CD34,PC-3,ascending-aorta,sigmoid-colon,HUDEP-2,Peyers-patch,MCF-7,GM20000,U2OS,Ishikawa,esophagus-squamous-epithelium,IMR-90,MCF-10AT1,stomach,GM10266,plasmablast,A-375,HCT-116,22Rv1,macrophage,myoblast,NPC,GM12868,BE2C,LNCaP-C4-2B,CaSki,skin,OVCAR-8,OCI-Ly7,UPCI-SCC-090,breast,GM06990,smooth-muscle-cell,VU-SCC-147,lymphocyte,Kasumi-1,HFF,SEM,gastroesophageal-sphincter,spleen,retina,MM1-S,GM04604,BJ,GM12869,heart,GM12867,liver,COLO-829,erythroblast,MIA-PaCa-2,T-cell,WERI-Rb-1,colon,cardiac,A2780cis,BL41,nerve,hiPSC,T-47D,Caco-2,CHRF28811,leukemia,SK-N-AS,testis,GM12873,uterus,peripheral-blood-neutrophil,MDM,hESC,thoracic-aorta,osteoblast,fibroblast,pancreas,glioblastoma,primary-glioblastoma,neuroblastoma,GM12872,A-673,A2780,HMS001,HL-60,K-562,neutrophil,GM12801,ID00015,KMS-11,GM12865,GM04025,WA09,THP-1,SK-MEL-147,erythroid,Loucy,GM12875,SUM159,ID00014,FT282,HEK293,ZR751,LNCaP,NB4,GM12871,bonchial,TALL-1,BC-3,esophagus,GM09237,D54,MCF-10A,prostate,DND41,GM12870,GM12864,epithelial,HeLa-S3,OCI-Ly3,PANC-1,GSC23,WI-38VA13,HUES-64,GP5D,KARPAS422,WI-38,CUTLL1,MCF-10CA1a,ovary,GM10248,myotube,choroid-plexus,SLK,endothelial,lung,B-cell,kidney,neuron,Jurkat,aorta,delta-47,WA01,vagina,GM13976,GM13977,81-3,BJAB,aggregated-lymphoid-nodules,HAP1,HeLa-Kyoto,adrenal-gland,HeLa,MDA-MB-157,RH4,fetal,coronary-artery,thyroid-gland,MDA-MB-435,islet,CD14,neural,OCI-Ly1,KB,cortical-interneuron,GM17942,RWPE-2,esophagus-muscularis-mucosa,tibial-artery,GM12866,HEC-1-B,tibial-nerve,GM12878,GM09236,GM06077,SH-SY5Y,ASC,artery,GM12874,786-O,NCI-H929,SU-DHL-6,medulloblastoma,anterior-temporal-cortex,HEK293T | 98791113 | 98791617 |
| chr9 | 98790767 | 98792591 | CTCF | HEC-1-B | 98791588 | 98791687 |
| chr9 | 98790767 | 98792591 | CTCF | hESC,B-cell,neuron,RH4,A-549,keratinocyte,fibroblast,Loucy | 98791820 | 98792030 |
| chr9 | 98793980 | 98796321 | CTCF | HT-1080 | 98794484 | 98794751 |
| chr9 | 98793980 | 98796321 | CTCF | HT-1080 | 98795081 | 98795272 |
| chr9 | 98793980 | 98796321 | CTCF | HCT-116 | 98795227 | 98795523 |
| chr9 | 98793980 | 98796321 | CTCF | smooth-muscle-cell,OCI-Ly3,K-562,bonchial,coronary-artery,SUM159,esophagus,HCT-116 | 98796030 | 98796229 |
| chr9 | 98790767 | 98792591 | CTCFL | OVCAR-8,delta-47,K-562,FT282,Kelly | 98791209 | 98791485 |
| chr9 | 98781965 | 98790676 | DAXX | PC-3 | 98782053 | 98782221 |
| chr9 | 98790767 | 98792591 | DAXX | PC-3 | 98791190 | 98791358 |
| chr9 | 98790767 | 98792591 | DDX5 | BT-549 | 98791266 | 98791444 |
| chr9 | 98781965 | 98790676 | DEK | HeLa-S3 | 98782041 | 98782296 |
| chr9 | 98790767 | 98792591 | DEK | HeLa-S3 | 98791173 | 98791416 |
| chr9 | 98793980 | 98796321 | DMAP1 | Hep-G2 | 98796087 | 98796275 |
| chr9 | 98790767 | 98792591 | DPF2 | BIN-67,SCCOHT-1,K-562 | 98791204 | 98791464 |
| chr9 | 98793980 | 98796321 | DPF2 | BIN-67,GM12878 | 98795993 | 98796282 |
| chr9 | 98790767 | 98792591 | DRAP1 | Hep-G2 | 98791252 | 98791481 |
| chr9 | 98781965 | 98790676 | DUX4 | WA01 | 98784981 | 98785274 |
| chr9 | 98790767 | 98792591 | E2F1 | MDA-MB-231,LNCaP,K-562 | 98791225 | 98791429 |
| chr9 | 98793980 | 98796321 | E2F1 | MCF-7 | 98795812 | 98796251 |
| chr9 | 98790767 | 98792591 | E2F4 | K-562 | 98791253 | 98791384 |
| chr9 | 98790767 | 98792591 | E2F6 | K-562 | 98791537 | 98791703 |
| chr9 | 98790767 | 98792591 | E2F6 | K-562 | 98791762 | 98791894 |
| chr9 | 98790767 | 98792591 | E2F6 | WA01 | 98792039 | 98792147 |
| chr9 | 98793980 | 98796321 | E2F6 | A-549,K-562 | 98796100 | 98796258 |
| chr9 | 98790767 | 98792591 | E2F8 | K-562 | 98791261 | 98791557 |
| chr9 | 98790767 | 98792591 | E4F1 | K-562 | 98791320 | 98791566 |
| chr9 | 98793980 | 98796321 | EGR1 | K-562 | 98794202 | 98794404 |
| chr9 | 98790767 | 98792591 | EHF | RWPE-1 | 98790982 | 98791589 |
| chr9 | 98792920 | 98793719 | EHF | RWPE-1 | 98793082 | 98793369 |
| chr9 | 98781965 | 98790676 | EHMT2 | Rh41 | 98790213 | 98790547 |
| chr9 | 98790767 | 98792591 | ELF1 | Hep-G2,K-562,SK-N-MC,MCF-7 | 98791230 | 98791488 |
| chr9 | 98793980 | 98796321 | ELF1 | ME-1,MCF-7,GM12878 | 98796010 | 98796288 |
| chr9 | 98781965 | 98790676 | ELF3 | PDAC | 98782095 | 98782507 |
| chr9 | 98781965 | 98790676 | ELL2 | HeLa | 98789811 | 98790021 |
| chr9 | 98790767 | 98792591 | ELL2 | HeLa | 98791215 | 98791414 |
| chr9 | 98781965 | 98790676 | EP300 | HeLa-S3,Ishikawa | 98782027 | 98782259 |
| chr9 | 98790767 | 98792591 | EP300 | WA01,fibroblast,AML,Ishikawa,K-562,HeLa-S3 | 98791239 | 98791414 |
| chr9 | 98790767 | 98792591 | EP300 | Ishikawa | 98791750 | 98791970 |
| chr9 | 98778854 | 98779361 | ERG | VCaP,aortic-endothelial-cell,HUVEC-C | 98779065 | 98779322 |
| chr9 | 98781965 | 98790676 | ERG | AMLPZ12 | 98783888 | 98784091 |
| chr9 | 98781965 | 98790676 | ERG | CD34,MCF-7 | 98790180 | 98790410 |
| chr9 | 98790767 | 98792591 | ERG | SKNO-1,HAEC,SEM | 98791229 | 98791422 |
| chr9 | 98792920 | 98793719 | ERG | VCaP | 98793062 | 98793248 |
| chr9 | 98792920 | 98793719 | ERG | VCaP | 98793192 | 98793331 |
| chr9 | 98793980 | 98796321 | ERG | SKNO-1 | 98795645 | 98795852 |
| chr9 | 98793980 | 98796321 | ERG | VCaP,aortic-endothelial-cell,HUVEC-C,SEM,CD34,MCF-7 | 98796025 | 98796320 |
| chr9 | 98778854 | 98779361 | ESR1 | MCF-7,MDA-MB-134-VI | 98779074 | 98779338 |
| chr9 | 98781965 | 98790676 | ESR1 | MCF-7,Ishikawa | 98783894 | 98784116 |
| chr9 | 98781965 | 98790676 | ESR1 | MCF-7 | 98785407 | 98785819 |
| chr9 | 98781965 | 98790676 | ESR1 | MCF-7 | 98787898 | 98788264 |
| chr9 | 98781965 | 98790676 | ESR1 | MCF-7,Ishikawa | 98790247 | 98790562 |
| chr9 | 98790767 | 98792591 | ESR1 | MCF-7,T-47D,Ishikawa,breast | 98791175 | 98791484 |
| chr9 | 98790767 | 98792591 | ESR1 | Ishikawa | 98791696 | 98792033 |
| chr9 | 98790767 | 98792591 | ESR1 | Ishikawa | 98792126 | 98792368 |
| chr9 | 98793980 | 98796321 | ESR1 | MCF-7 | 98794681 | 98794846 |
| chr9 | 98793980 | 98796321 | ESR2 | MDA-MB-231 | 98795675 | 98795857 |
| chr9 | 98790767 | 98792591 | ESRRA | K-562 | 98791145 | 98791507 |
| chr9 | 98781965 | 98790676 | ETS1 | K-562 | 98783940 | 98784149 |
| chr9 | 98781965 | 98790676 | ETS1 | K-562 | 98789864 | 98790182 |
| chr9 | 98781965 | 98790676 | ETS1 | K-562 | 98790230 | 98790378 |
| chr9 | 98790767 | 98792591 | ETS1 | 786-O,CTV-1 | 98791228 | 98791513 |
| chr9 | 98792920 | 98793719 | ETS1 | 786-O | 98793079 | 98793308 |
| chr9 | 98793980 | 98796321 | ETS1 | cardiomyocyte,HUVEC-C,THP-6,SCC-25 | 98795991 | 98796287 |
| chr9 | 98790767 | 98792591 | ETV1 | COLO-800 | 98791265 | 98791445 |
| chr9 | 98793980 | 98796321 | ETV1 | MDA-Pca-2b,GIST | 98796008 | 98796122 |
| chr9 | 98790767 | 98792591 | EZH1 | ProEs | 98791296 | 98791488 |
| chr9 | 98790767 | 98792591 | EZH2 | prostate-cancer,SU-DHL-6,RH30 | 98791165 | 98791401 |
| chr9 | 98778854 | 98779361 | FLI1 | HUVEC-C | 98778929 | 98779158 |
| chr9 | 98790767 | 98792591 | FLI1 | CTV-1 | 98791344 | 98791546 |
| chr9 | 98793980 | 98796321 | FLI1 | SKNO-1,UAE,HUVEC-C | 98795918 | 98796271 |
| chr9 | 98781965 | 98790676 | FOS | HeLa-S3,CFPAC-1,MCF-10A | 98782085 | 98782285 |
| chr9 | 98781965 | 98790676 | FOS | HCT-116 | 98787072 | 98787394 |
| chr9 | 98781965 | 98790676 | FOS | HCT-116 | 98787514 | 98787767 |
| chr9 | 98781965 | 98790676 | FOS | HCT-116 | 98788286 | 98789030 |
| chr9 | 98781965 | 98790676 | FOS | HCT-116 | 98789468 | 98789772 |
| chr9 | 98781965 | 98790676 | FOS | HCT-116 | 98790262 | 98790566 |
| chr9 | 98790767 | 98792591 | FOS | CFPAC-1,HCT-116,myometrium,MCF-10A,leiomyoma,MNNG-HOS,HeLa-S3,MCF-7,IMR-90 | 98791103 | 98791372 |
| chr9 | 98781965 | 98790676 | FOSL1 | HCT-116 | 98782028 | 98782318 |
| chr9 | 98790767 | 98792591 | FOSL1 | MDA-MB-231,K-562 | 98791171 | 98791380 |
| chr9 | 98790767 | 98792591 | FOSL2 | NPC,MCF-7,A-549,SK-N-SH | 98791162 | 98791381 |
| chr9 | 98790767 | 98792591 | FOXA1 | CFPAC-1,prostate,MCF-7-TAMR-1,MCF-7 | 98791178 | 98791398 |
| chr9 | 98792920 | 98793719 | FOXA1 | CFPAC-1,MCF-7 | 98793058 | 98793312 |
| chr9 | 98793980 | 98796321 | FOXA1 | ZR751,pancreatic-progenitor,prostate-cancer,LNCaP,MCF-7,LNCaP-C4-2B,LS180,22Rv1,breast-cancer,prostate | 98795996 | 98796267 |
| chr9 | 98781965 | 98790676 | FOXA2 | liver,Caco-2,CFPAC-1 | 98782042 | 98782287 |
| chr9 | 98790767 | 98792591 | FOXA2 | CFPAC-1 | 98791078 | 98791424 |
| chr9 | 98792920 | 98793719 | FOXA2 | CFPAC-1 | 98793063 | 98793354 |
| chr9 | 98793980 | 98796321 | FOXA2 | BJ1-hTERT,Caco-2 | 98795893 | 98796204 |
| chr9 | 98790767 | 98792591 | FOXL2 | HGrC1 | 98791170 | 98791400 |
| chr9 | 98781965 | 98790676 | FOXM1 | HeLa | 98781973 | 98782231 |
| chr9 | 98790767 | 98792591 | FOXP1 | H9 | 98791284 | 98791418 |
| chr9 | 98790767 | 98792591 | FOXP2 | PFSK1 | 98791265 | 98791393 |
| chr9 | 98793980 | 98796321 | FOXP2 | PFSK1 | 98796137 | 98796288 |
| chr9 | 98790767 | 98792591 | GABPA | K-562 | 98791260 | 98791415 |
| chr9 | 98792920 | 98793719 | GABPA | VCaP | 98793079 | 98793282 |
| chr9 | 98793980 | 98796321 | GABPA | WA01,K-562 | 98796048 | 98796299 |
| chr9 | 98790767 | 98792591 | GATA1 | K-562,HUDEP-2,erythroid,CD34 | 98791225 | 98791426 |
| chr9 | 98781965 | 98790676 | GATA2 | K-562,LNCaP | 98782019 | 98782142 |
| chr9 | 98790767 | 98792591 | GATA2 | ME-1,CD34,dermal-fibroblast,LNCaP,K-562,primary-endometrial-stromal-cell | 98791190 | 98791412 |
| chr9 | 98790767 | 98792591 | GATA2 | hiPSC | 98791483 | 98791693 |
| chr9 | 98781965 | 98790676 | GATA3 | A-549,MCF-7 | 98781999 | 98782173 |
| chr9 | 98790767 | 98792591 | GATA3 | breast,MCF-7,T-47D | 98791231 | 98791417 |
| chr9 | 98781965 | 98790676 | GATA6 | YCC-3 | 98783646 | 98783770 |
| chr9 | 98790767 | 98792591 | GATA6 | YCC-3,PATU8988,OACP4-C,AGS | 98791169 | 98791440 |
| chr9 | 98790767 | 98792591 | GATAD2B | MCF-7 | 98791169 | 98791406 |
| chr9 | 98790767 | 98792591 | GFI1B | K-562 | 98791169 | 98791417 |
| chr9 | 98781965 | 98790676 | GLIS1 | HEK293 | 98785597 | 98785809 |
| chr9 | 98790767 | 98792591 | GLIS1 | HEK293 | 98791066 | 98791465 |
| chr9 | 98781965 | 98790676 | GLIS2 | HEK293 | 98785459 | 98785778 |
| chr9 | 98790767 | 98792591 | GLIS3 | H9 | 98791232 | 98791461 |
| chr9 | 98790767 | 98792591 | GMEB1 | K-562 | 98791154 | 98791472 |
| chr9 | 98778854 | 98779361 | GRHL1 | MCF-7 | 98779061 | 98779298 |
| chr9 | 98781965 | 98790676 | GTF2B | K-562 | 98789782 | 98789990 |
| chr9 | 98781965 | 98790676 | GTF2F1 | K-562 | 98789739 | 98789980 |
| chr9 | 98790767 | 98792591 | GTF2F1 | HeLa-S3 | 98791106 | 98791440 |
| chr9 | 98793980 | 98796321 | GTF2F1 | GM12878 | 98795826 | 98796152 |
| chr9 | 98793980 | 98796321 | GTF2F1 | K-562 | 98796014 | 98796282 |
| chr9 | 98790767 | 98792591 | HBP1 | Hep-G2 | 98791271 | 98791385 |
| chr9 | 98790767 | 98792591 | HCFC1 | K-562 | 98791267 | 98791419 |
| chr9 | 98790767 | 98792591 | HDAC1 | K-562,MCF-7 | 98791116 | 98791540 |
| chr9 | 98790767 | 98792591 | HDAC1 | K-562 | 98791975 | 98792209 |
| chr9 | 98793980 | 98796321 | HDAC1 | K-562 | 98795164 | 98795526 |
| chr9 | 98778854 | 98779361 | HDAC2 | Hep-G2 | 98778918 | 98779042 |
| chr9 | 98781965 | 98790676 | HDAC2 | RH4 | 98783886 | 98784378 |
| chr9 | 98790767 | 98792591 | HDAC2 | MCF-7,Hep-G2,RH4,K-562 | 98791217 | 98791475 |
| chr9 | 98790767 | 98792591 | HDAC2 | K-562 | 98791873 | 98792325 |
| chr9 | 98793980 | 98796321 | HDAC2 | K-562 | 98795222 | 98795583 |
| chr9 | 98793980 | 98796321 | HDAC2 | PC-3 | 98795660 | 98795783 |
| chr9 | 98781965 | 98790676 | HDAC3 | RH4 | 98783893 | 98784350 |
| chr9 | 98781965 | 98790676 | HDAC3 | RH4 | 98785578 | 98785780 |
| chr9 | 98790767 | 98792591 | HDAC3 | RH4 | 98791019 | 98791376 |
| chr9 | 98781965 | 98790676 | HDAC8 | K-562 | 98782021 | 98782259 |
| chr9 | 98790767 | 98792591 | HDAC8 | K-562 | 98791343 | 98791551 |
| chr9 | 98790767 | 98792591 | HDGF | K-562 | 98791032 | 98791821 |
| chr9 | 98790767 | 98792591 | HDGF | K-562 | 98791524 | 98792411 |
| chr9 | 98793980 | 98796321 | HDGF | K-562 | 98795108 | 98795732 |
| chr9 | 98781965 | 98790676 | HEXIM1 | HCT-116 | 98785460 | 98785669 |
| chr9 | 98781965 | 98790676 | HEXIM1 | HCT-116 | 98790175 | 98790622 |
| chr9 | 98790767 | 98792591 | HIC1 | HEK293 | 98791073 | 98791457 |
| chr9 | 98781965 | 98790676 | HIF1A | U2OS | 98782150 | 98782442 |
| chr9 | 98790767 | 98792591 | HIF1A | PC-3,U2OS | 98791084 | 98791396 |
| chr9 | 98778854 | 98779361 | HIF3A | Hep-3B2-1-7 | 98778854 | 98779263 |
| chr9 | 98793980 | 98796321 | HIF3A | Hep-3B2-1-7 | 98795380 | 98795597 |
| chr9 | 98793980 | 98796321 | HIVEP1 | Hep-G2 | 98796046 | 98796300 |
| chr9 | 98781965 | 98790676 | HNF4A | IM95 | 98787176 | 98787400 |
| chr9 | 98790767 | 98792591 | HNF4A | KATO-III | 98790796 | 98791065 |
| chr9 | 98790767 | 98792591 | HNF4A | Caco-2,gastric-epithelial-cell,KATO-III,IM95 | 98791216 | 98791429 |
| chr9 | 98793980 | 98796321 | HNF4A | GP5D | 98795311 | 98795625 |
| chr9 | 98778854 | 98779361 | HOXA3 | Hep-G2 | 98778927 | 98779047 |
| chr9 | 98793980 | 98796321 | HOXA3 | Hep-G2 | 98796059 | 98796256 |
| chr9 | 98790767 | 98792591 | HOXB13 | prostate | 98791258 | 98791419 |
| chr9 | 98790767 | 98792591 | HOXB8 | K-562 | 98791211 | 98791420 |
| chr9 | 98781965 | 98790676 | HSF1 | HCT-116 | 98782075 | 98782402 |
| chr9 | 98790767 | 98792591 | HSF1 | NCI-H838,MO91 | 98791269 | 98791467 |
| chr9 | 98793980 | 98796321 | HSF1 | HCT-116,U2OS,MCF-7 | 98795252 | 98795525 |
| chr9 | 98781965 | 98790676 | ID3 | K-562 | 98789668 | 98789975 |
| chr9 | 98790767 | 98792591 | ID3 | K-562 | 98792149 | 98792419 |
| chr9 | 98790767 | 98792591 | ILF3 | K-562 | 98791118 | 98791789 |
| chr9 | 98793980 | 98796321 | ILF3 | K-562 | 98795954 | 98796186 |
| chr9 | 98790767 | 98792591 | IRF1 | K-562 | 98791282 | 98791574 |
| chr9 | 98790767 | 98792591 | IRF2 | K-562 | 98791298 | 98791441 |
| chr9 | 98793980 | 98796321 | IRF2 | keratinocyte | 98796067 | 98796263 |
| chr9 | 98790767 | 98792591 | IRF3 | GM12878 | 98791177 | 98791383 |
| chr9 | 98790767 | 98792591 | IRF4 | GM12878,T-cell,BC-3,U266 | 98791144 | 98791403 |
| chr9 | 98790767 | 98792591 | IRF4 | U266 | 98791704 | 98791868 |
| chr9 | 98793980 | 98796321 | IRF4 | T-cell | 98796015 | 98796227 |
| chr9 | 98790767 | 98792591 | JARID2 | MRC-5 | 98791358 | 98791715 |
| chr9 | 98793980 | 98796321 | JARID2 | MRC-5 | 98796029 | 98796300 |
| chr9 | 98790767 | 98792591 | JMJD1C | NB4,HL-60,Kasumi-1,THP-1 | 98791185 | 98791405 |
| chr9 | 98781965 | 98790676 | JUNB | CFPAC-1 | 98782033 | 98782317 |
| chr9 | 98790767 | 98792591 | JUNB | CFPAC-1,HAEC,MCF10A-Er-Src,K-562 | 98791093 | 98791398 |
| chr9 | 98790767 | 98792591 | JUND | A-549,WA01,K-562,SK-N-SH,HeLa-S3 | 98791211 | 98791448 |
| chr9 | 98778854 | 98779361 | JUN | HAEC | 98778880 | 98779010 |
| chr9 | 98781965 | 98790676 | JUN | MCF10A-Er-Src | 98782096 | 98782290 |
| chr9 | 98790767 | 98792591 | JUN | MCF-7,HAEC,HeLa-S3,MCF10A-Er-Src,MDA-MB-231,Karpas-299,WA01,K-562,HUES-8,786-O,MDA-BoM-1833 | 98791161 | 98791474 |
| chr9 | 98790767 | 98792591 | JUN | 786-O | 98791642 | 98791944 |
| chr9 | 98792920 | 98793719 | JUN | 786-O | 98793125 | 98793356 |
| chr9 | 98790767 | 98792591 | KLF10 | HEK293 | 98791135 | 98791555 |
| chr9 | 98790767 | 98792591 | KLF12 | HEK293 | 98791153 | 98791398 |
| chr9 | 98790767 | 98792591 | KLF13 | K-562 | 98791141 | 98791439 |
| chr9 | 98790767 | 98792591 | KLF15 | HEK293 | 98791206 | 98791376 |
| chr9 | 98790767 | 98792591 | KLF16 | HEK293,K-562 | 98791239 | 98791462 |
| chr9 | 98790767 | 98792591 | KLF1 | HEK293,erythroid | 98791198 | 98791398 |
| chr9 | 98781965 | 98790676 | KLF3 | keratinocyte | 98786956 | 98787394 |
| chr9 | 98790767 | 98792591 | KLF3 | keratinocyte | 98790928 | 98791443 |
| chr9 | 98781965 | 98790676 | KLF4 | PDAC,keratinocyte | 98781968 | 98782396 |
| chr9 | 98790767 | 98792591 | KLF4 | PDAC,keratinocyte | 98791062 | 98791468 |
| chr9 | 98790767 | 98792591 | KLF5 | KATO-III,HEK293,GP5D,HCC95,ESO-26 | 98791128 | 98791453 |
| chr9 | 98790767 | 98792591 | KLF8 | HEK293 | 98791197 | 98791470 |
| chr9 | 98790767 | 98792591 | KLF9 | HEK293,MCF-7,GBM1A | 98791147 | 98791434 |
| chr9 | 98790767 | 98792591 | L3MBTL2 | K-562 | 98791805 | 98792049 |
| chr9 | 98793980 | 98796321 | L3MBTL2 | K-562 | 98795985 | 98796226 |
| chr9 | 98790767 | 98792591 | LDB1 | HEP,Kasumi-1 | 98791218 | 98791462 |
| chr9 | 98793980 | 98796321 | LDB1 | Kasumi-1 | 98796019 | 98796250 |
| chr9 | 98790767 | 98792591 | LEF1 | K-562 | 98791261 | 98791484 |
| chr9 | 98781965 | 98790676 | LMO2 | CCRF-CEM | 98784938 | 98785151 |
| chr9 | 98790767 | 98792591 | LMO2 | Kasumi-1 | 98791231 | 98791404 |
| chr9 | 98781965 | 98790676 | MAF1 | THP-1 | 98790154 | 98790386 |
| chr9 | 98790767 | 98792591 | MAFB | islet | 98791208 | 98791434 |
| chr9 | 98781965 | 98790676 | MAFF | HeLa-S3 | 98781996 | 98782285 |
| chr9 | 98790767 | 98792591 | MAFF | HeLa-S3 | 98791210 | 98791393 |
| chr9 | 98790767 | 98792591 | MAF | CD4 | 98791222 | 98791398 |
| chr9 | 98790767 | 98792591 | MAFK | HeLa-S3 | 98791247 | 98791395 |
| chr9 | 98790767 | 98792591 | MAML1 | SCC | 98790871 | 98791446 |
| chr9 | 98778854 | 98779361 | MAX | Hep-G2 | 98778887 | 98779056 |
| chr9 | 98781965 | 98790676 | MAX | HeLa-S3,HCT-116 | 98782107 | 98782306 |
| chr9 | 98781965 | 98790676 | MAX | NCI-H2171 | 98785469 | 98785862 |
| chr9 | 98790767 | 98792591 | MAX | MCF-7,endothelial,HeLa-S3,Ishikawa,K-562,SK-N-SH,P493-6 | 98791214 | 98791425 |
| chr9 | 98790767 | 98792591 | MAX | Ishikawa | 98791758 | 98791949 |
| chr9 | 98793980 | 98796321 | MAX | MDA-MB-468 | 98795902 | 98796045 |
| chr9 | 98793980 | 98796321 | MAX | MCF-7,Hep-G2,HeLa-S3,Ishikawa,K-562,SK-N-SH | 98796080 | 98796264 |
| chr9 | 98790767 | 98792591 | MAZ | IMR-90,Hep-G2,HEK293,HeLa-S3,MCF-7,K-562 | 98791206 | 98791432 |
| chr9 | 98793980 | 98796321 | MAZ | Hep-G2,HEK293,K-562 | 98796029 | 98796212 |
| chr9 | 98790767 | 98792591 | MBD3 | MCF-7 | 98792305 | 98792482 |
| chr9 | 98790767 | 98792591 | MED12 | myometrium | 98791194 | 98791251 |
| chr9 | 98790767 | 98792591 | MED12 | leiomyoma,myometrium | 98791306 | 98791387 |
| chr9 | 98790767 | 98792591 | MEF2A | Hep-G2 | 98791264 | 98791399 |
| chr9 | 98793980 | 98796321 | MEN1 | PC-3 | 98795840 | 98796105 |
| chr9 | 98790767 | 98792591 | MITF | melanocyte | 98791262 | 98791467 |
| chr9 | 98790767 | 98792591 | MLLT1 | K-562 | 98791123 | 98791522 |
| chr9 | 98790767 | 98792591 | MLLT1 | K-562 | 98791975 | 98792304 |
| chr9 | 98793980 | 98796321 | MLLT1 | K-562 | 98795212 | 98795425 |
| chr9 | 98790767 | 98792591 | MLLT3 | THP-1 | 98791123 | 98791438 |
| chr9 | 98790767 | 98792591 | MNT | MCF-7,K-562 | 98791106 | 98791512 |
| chr9 | 98790767 | 98792591 | MTA1 | K-562 | 98791255 | 98791528 |
| chr9 | 98790767 | 98792591 | MTA1 | K-562 | 98792049 | 98792277 |
| chr9 | 98781965 | 98790676 | MTA2 | RH4 | 98783815 | 98784304 |
| chr9 | 98781965 | 98790676 | MTA2 | RH4 | 98785424 | 98785808 |
| chr9 | 98790767 | 98792591 | MTA2 | RH4,K-562 | 98791142 | 98791500 |
| chr9 | 98790767 | 98792591 | MTA2 | K-562 | 98791813 | 98792166 |
| chr9 | 98790767 | 98792591 | MTA3 | K-562 | 98791090 | 98791656 |
| chr9 | 98793980 | 98796321 | MTA3 | K-562 | 98796026 | 98796249 |
| chr9 | 98781965 | 98790676 | MTF2 | DU145 | 98788518 | 98788803 |
| chr9 | 98790767 | 98792591 | MTF2 | DU145 | 98791151 | 98791429 |
| chr9 | 98793980 | 98796321 | MTF2 | DU145 | 98795338 | 98795613 |
| chr9 | 98790767 | 98792591 | MXD4 | Hep-G2 | 98791199 | 98791444 |
| chr9 | 98793980 | 98796321 | MXD4 | Hep-G2 | 98796032 | 98796193 |
| chr9 | 98790767 | 98792591 | MXI1 | IMR-90 | 98791198 | 98791361 |
| chr9 | 98781965 | 98790676 | MYB | THP-1 | 98786944 | 98787101 |
| chr9 | 98790767 | 98792591 | MYBL2 | Hep-G2 | 98791256 | 98791394 |
| chr9 | 98793980 | 98796321 | MYBL2 | Hep-G2 | 98796075 | 98796219 |
| chr9 | 98781965 | 98790676 | MYC | HeLa-S3,GP5D | 98782051 | 98782377 |
| chr9 | 98781965 | 98790676 | MYC | P493-6 | 98785213 | 98785374 |
| chr9 | 98781965 | 98790676 | MYC | NCI-H2171 | 98785489 | 98785775 |
| chr9 | 98790767 | 98792591 | MYC | MM1-S,K-562,MCF-10A,MCF-7,HFF,GP5D,endothelial,U2OS,CD34,HeLa-S3,P493-6 | 98791219 | 98791402 |
| chr9 | 98781965 | 98790676 | MYCN | RH4 | 98783946 | 98784571 |
| chr9 | 98781965 | 98790676 | MYCN | Kelly | 98785494 | 98785740 |
| chr9 | 98790767 | 98792591 | MYCN | SK-N-BE2-C,LNCaP,BE2C,RH4,COG-N-415,LA-N-5,SHEP-21N,MYCN-3,SH-EP | 98791189 | 98791420 |
| chr9 | 98781965 | 98790676 | MYF5 | Rh18 | 98783927 | 98784140 |
| chr9 | 98790767 | 98792591 | MYNN | K-562 | 98791180 | 98791411 |
| chr9 | 98781965 | 98790676 | MYOCD | A-549 | 98790221 | 98790504 |
| chr9 | 98781965 | 98790676 | MYOD1 | RH4,myoblast,rhabdomyosarcoma,IMR-90 | 98783846 | 98784241 |
| chr9 | 98781965 | 98790676 | MYOD1 | rhabdomyosarcoma,RH30,RH4 | 98785546 | 98785804 |
| chr9 | 98781965 | 98790676 | MYOD1 | RH4 | 98786750 | 98786945 |
| chr9 | 98790767 | 98792591 | MYOD1 | RD,RH30 | 98791185 | 98791395 |
| chr9 | 98792920 | 98793719 | MYOD1 | RH4 | 98793077 | 98793246 |
| chr9 | 98793980 | 98796321 | MYOD1 | RD | 98795662 | 98795843 |
| chr9 | 98781965 | 98790676 | MYOG | RH4,RH30 | 98783916 | 98784210 |
| chr9 | 98781965 | 98790676 | MYOG | RH4 | 98785604 | 98785810 |
| chr9 | 98793980 | 98796321 | NANOG | WA01 | 98796002 | 98796242 |
| chr9 | 98790767 | 98792591 | NCOA2 | MCF-7 | 98791218 | 98791396 |
| chr9 | 98790767 | 98792591 | NCOA2 | MCF-7 | 98791994 | 98792156 |
| chr9 | 98790767 | 98792591 | NCOR1 | K-562 | 98791187 | 98791569 |
| chr9 | 98793980 | 98796321 | NCOR1 | LS180 | 98796033 | 98796189 |
| chr9 | 98781965 | 98790676 | NCOR2 | LS180,AML | 98782196 | 98782318 |
| chr9 | 98790767 | 98792591 | NCOR2 | AML | 98791251 | 98791403 |
| chr9 | 98790767 | 98792591 | NEUROD1 | K-562 | 98791213 | 98791418 |
| chr9 | 98790767 | 98792591 | NEUROD1 | K-562 | 98791527 | 98791669 |
| chr9 | 98793980 | 98796321 | NEUROD1 | K-562 | 98795701 | 98795816 |
| chr9 | 98781965 | 98790676 | NEUROG2 | MRC-5 | 98783959 | 98784122 |
| chr9 | 98781965 | 98790676 | NEUROG2 | MRC-5 | 98785414 | 98785741 |
| chr9 | 98793980 | 98796321 | NFAT5 | Hep-G2 | 98796067 | 98796266 |
| chr9 | 98781965 | 98790676 | NFATC3 | K-562 | 98789683 | 98789915 |
| chr9 | 98781965 | 98790676 | NFE2 | K-562 | 98781986 | 98782241 |
| chr9 | 98790767 | 98792591 | NFE2 | ProEs,erythroid | 98791230 | 98791392 |
| chr9 | 98781965 | 98790676 | NFE2L2 | K-562 | 98782060 | 98782237 |
| chr9 | 98790767 | 98792591 | NFE2L2 | K-562 | 98791175 | 98791380 |
| chr9 | 98790767 | 98792591 | NFIB | MCF-7 | 98791195 | 98791418 |
| chr9 | 98781965 | 98790676 | NFIC | Ishikawa | 98782110 | 98782347 |
| chr9 | 98781965 | 98790676 | NFIC | K-562 | 98789334 | 98789789 |
| chr9 | 98790767 | 98792591 | NFIC | Ishikawa,K-562,SK-N-SH | 98791174 | 98791419 |
| chr9 | 98790767 | 98792591 | NFKB1 | MCF10A-Er-Src,L1236 | 98791180 | 98791391 |
| chr9 | 98793980 | 98796321 | NFKB1 | HEK293T | 98795984 | 98796177 |
| chr9 | 98793980 | 98796321 | NFKBIZ | Hep-G2 | 98796004 | 98796255 |
| chr9 | 98781965 | 98790676 | NFYA | K-562 | 98782012 | 98782201 |
| chr9 | 98790767 | 98792591 | NFYA | K-562 | 98791196 | 98791473 |
| chr9 | 98793980 | 98796321 | NFYA | Hep-G2 | 98796120 | 98796267 |
| chr9 | 98790767 | 98792591 | NKX3-1 | islet | 98791264 | 98791436 |
| chr9 | 98790767 | 98792591 | NONO | K-562 | 98791189 | 98791331 |
| chr9 | 98790767 | 98792591 | NR1H2 | HT29 | 98791232 | 98791393 |
| chr9 | 98778854 | 98779361 | NR2F2 | MCF-7 | 98779111 | 98779344 |
| chr9 | 98781965 | 98790676 | NR2F2 | MCF-7 | 98786087 | 98786494 |
| chr9 | 98790767 | 98792591 | NR2F2 | K-562,MCF-7 | 98791238 | 98791438 |
| chr9 | 98778854 | 98779361 | NR3C1 | MCF-7 | 98779047 | 98779280 |
| chr9 | 98781965 | 98790676 | NR3C1 | HCC1937,K-562,HeLa-B2,Ishikawa,A-549,MDA-MB-231,MCF-10A,HCC70 | 98781984 | 98782272 |
| chr9 | 98781965 | 98790676 | NR3C1 | breast | 98785487 | 98785720 |
| chr9 | 98781965 | 98790676 | NR3C1 | HCC1937 | 98787011 | 98787485 |
| chr9 | 98790767 | 98792591 | NR3C1 | BEAS-2B,HCC1937,K-562,HeLa-B2,Ishikawa,U2OS,A-549,IMR-90,HCC70,MCF-10A,MDA-MB-231,SUM159PT | 98791125 | 98791388 |
| chr9 | 98790767 | 98792591 | NR3C1 | Ishikawa | 98791733 | 98791865 |
| chr9 | 98793980 | 98796321 | NR3C1 | BEAS-2B | 98796035 | 98796303 |
| chr9 | 98781965 | 98790676 | NRF1 | HCC1954 | 98782247 | 98782366 |
| chr9 | 98790767 | 98792591 | NRF1 | HCC1954 | 98791205 | 98791349 |
| chr9 | 98793980 | 98796321 | NRF1 | HMEC-1 | 98796065 | 98796247 |
| chr9 | 98778854 | 98779361 | NRIP1 | MCF-7 | 98778946 | 98779214 |
| chr9 | 98790767 | 98792591 | NRIP1 | MCF-7 | 98791236 | 98791388 |
| chr9 | 98793980 | 98796321 | NRL | retina | 98795945 | 98796268 |
| chr9 | 98781965 | 98790676 | OLIG2 | brain-prefrontal-cortex | 98783876 | 98784114 |
| chr9 | 98790767 | 98792591 | PARP1 | MCF-10A | 98791192 | 98791522 |
| chr9 | 98790767 | 98792591 | PAX5 | GM12878 | 98791253 | 98791417 |
| chr9 | 98778854 | 98779361 | PGR | MCF-7 | 98778861 | 98779334 |
| chr9 | 98781965 | 98790676 | PGR | MCF-7 | 98785457 | 98785737 |
| chr9 | 98781965 | 98790676 | PGR | MCF-7 | 98788027 | 98788291 |
| chr9 | 98790767 | 98792591 | PGR | MCF-7,myometrium | 98791068 | 98791492 |
| chr9 | 98793980 | 98796321 | PGR | MCF-7 | 98795257 | 98795467 |
| chr9 | 98790767 | 98792591 | PHF5A | Hep-G2 | 98791258 | 98791416 |
| chr9 | 98790767 | 98792591 | PHF8 | Hep-G2 | 98791302 | 98791475 |
| chr9 | 98793980 | 98796321 | PKNOX1 | K-562 | 98795197 | 98795515 |
| chr9 | 98781965 | 98790676 | PLAG1 | K-562 | 98788445 | 98788645 |
| chr9 | 98790767 | 98792591 | PLAG1 | K-562 | 98791847 | 98792034 |
| chr9 | 98793980 | 98796321 | PLAG1 | K-562 | 98795538 | 98795862 |
| chr9 | 98781965 | 98790676 | PML | K-562 | 98789704 | 98790280 |
| chr9 | 98790767 | 98792591 | PML | K-562 | 98791262 | 98791552 |
| chr9 | 98781965 | 98790676 | POU2F1 | 22Rv1 | 98789354 | 98789949 |
| chr9 | 98790767 | 98792591 | POU2F1 | T-47D | 98791132 | 98791447 |
| chr9 | 98793980 | 98796321 | POU2F2 | pre-B-cell | 98795567 | 98795769 |
| chr9 | 98781965 | 98790676 | POU2F3 | NCI-H1048 | 98789545 | 98789774 |
| chr9 | 98781965 | 98790676 | POU4F2 | HNPC | 98783904 | 98784061 |
| chr9 | 98781965 | 98790676 | POU5F1 | BG03 | 98783908 | 98784083 |
| chr9 | 98781965 | 98790676 | POU5F1 | SKM-1 | 98785446 | 98785755 |
| chr9 | 98781965 | 98790676 | POU5F1 | hESC | 98789458 | 98789796 |
| chr9 | 98781965 | 98790676 | POU5F1 | BG03 | 98790077 | 98790393 |
| chr9 | 98790767 | 98792591 | POU5F1 | BG03,hESC | 98791182 | 98791451 |
| chr9 | 98793980 | 98796321 | POU5F1 | BG03,WA01,BJ1-hTERT,HUES-8 | 98796002 | 98796258 |
| chr9 | 98790767 | 98792591 | PPARG | ASC | 98791019 | 98791312 |
| chr9 | 98790767 | 98792591 | PPARG | Hep-G2 | 98791271 | 98791437 |
| chr9 | 98790767 | 98792591 | PRDM10 | Hep-G2 | 98791238 | 98791416 |
| chr9 | 98781965 | 98790676 | PRDM14 | NCCIT | 98790223 | 98790460 |
| chr9 | 98793980 | 98796321 | PREB | Hep-G2 | 98796120 | 98796251 |
| chr9 | 98793980 | 98796321 | RARA | TSU-1621MT | 98795993 | 98796286 |
| chr9 | 98790767 | 98792591 | RB1 | K-562 | 98791152 | 98791449 |
| chr9 | 98793980 | 98796321 | RB1 | GM12878 | 98796004 | 98796252 |
| chr9 | 98781965 | 98790676 | RBBP4 | SCMC | 98783805 | 98784439 |
| chr9 | 98781965 | 98790676 | RBBP4 | SCMC | 98784729 | 98784973 |
| chr9 | 98781965 | 98790676 | RBBP4 | SCMC | 98785168 | 98785764 |
| chr9 | 98781965 | 98790676 | RBBP4 | SCMC | 98786765 | 98787145 |
| chr9 | 98790767 | 98792591 | RBBP4 | SCMC | 98791131 | 98791368 |
| chr9 | 98781965 | 98790676 | RBM14 | K-562 | 98790236 | 98790560 |
| chr9 | 98781965 | 98790676 | RELA | Detroit-562,SW480,LNCaP,FaDu,HeLa-B2 | 98782032 | 98782347 |
| chr9 | 98781965 | 98790676 | RELA | SGBS | 98786960 | 98787173 |
| chr9 | 98781965 | 98790676 | RELA | aortic-endothelial-cell | 98788031 | 98788199 |
| chr9 | 98790767 | 98792591 | RELA | 786-O | 98790810 | 98791088 |
| chr9 | 98790767 | 98792591 | RELA | Detroit-562,GM19099,786-O,HAEC,FaDu,HeLa-B2,aortic-endothelial-cell | 98791179 | 98791418 |
| chr9 | 98790767 | 98792591 | RELA | 786-O | 98791639 | 98791870 |
| chr9 | 98793980 | 98796321 | RELA | aortic-endothelial-cell | 98794741 | 98795016 |
| chr9 | 98793980 | 98796321 | RELA | aortic-endothelial-cell,HUVEC-C | 98796084 | 98796234 |
| chr9 | 98781965 | 98790676 | REST | colorectal-cancer | 98782130 | 98782465 |
| chr9 | 98790767 | 98792591 | REST | K-562 | 98791211 | 98791575 |
| chr9 | 98793980 | 98796321 | REST | A-549,neural | 98795934 | 98796096 |
| chr9 | 98793980 | 98796321 | REST | PANC-1,K-562 | 98796139 | 98796262 |
| chr9 | 98781965 | 98790676 | RFX1 | MCF-7 | 98786705 | 98786953 |
| chr9 | 98790767 | 98792591 | RFX5 | HeLa-S3 | 98791147 | 98791408 |
| chr9 | 98793980 | 98796321 | RFXAP | Hep-G2 | 98796100 | 98796246 |
| chr9 | 98790767 | 98792591 | RNF2 | HMELBRAF | 98791224 | 98791436 |
| chr9 | 98793980 | 98796321 | RNF2 | K-562 | 98796074 | 98796213 |
| chr9 | 98781965 | 98790676 | RORC | HCC70 | 98790090 | 98790523 |
| chr9 | 98781965 | 98790676 | RUNX1 | AML | 98783905 | 98784119 |
| chr9 | 98781965 | 98790676 | RUNX1 | Jurkat | 98785451 | 98785638 |
| chr9 | 98781965 | 98790676 | RUNX1 | NB4 | 98786956 | 98787178 |
| chr9 | 98781965 | 98790676 | RUNX1 | K-562 | 98789887 | 98790060 |
| chr9 | 98781965 | 98790676 | RUNX1 | Jurkat | 98790303 | 98790487 |
| chr9 | 98790767 | 98792591 | RUNX1 | Kasumi-1,K-562,CD34,NB4,BCP-ALL,H9,697,epididymis,AML,Jurkat,SKH1,keratinocyte,MV4-11,HL-60,MCF-10A,THP-1,hiPSC | 98791168 | 98791438 |
| chr9 | 98790767 | 98792591 | RUNX1 | epididymis | 98791661 | 98792053 |
| chr9 | 98793980 | 98796321 | RUNX1 | CD34,Jurkat,AML,epididymis,697 | 98796060 | 98796282 |
| chr9 | 98790767 | 98792591 | RUNX1T1 | Kasumi-1 | 98791163 | 98791464 |
| chr9 | 98793980 | 98796321 | RUNX1T1 | Kasumi-1 | 98796038 | 98796300 |
| chr9 | 98790767 | 98792591 | RUNX2 | LNCaP-C4-2B,Karpas-45,PER-117,SaOS-2 | 98791168 | 98791488 |
| chr9 | 98793980 | 98796321 | SALL3 | hiPSC | 98796109 | 98796314 |
| chr9 | 98781965 | 98790676 | SIN3A | HCT-116 | 98782057 | 98782245 |
| chr9 | 98790767 | 98792591 | SIN3A | MCF-7,A-549,WA01,SK-N-SH | 98791128 | 98791471 |
| chr9 | 98793980 | 98796321 | SIN3A | K-562 | 98795763 | 98796308 |
| chr9 | 98793980 | 98796321 | SIN3A | WA01,K-562,MCF-7,Hep-G2,PANC-1,A-549 | 98796029 | 98796315 |
| chr9 | 98790767 | 98792591 | SKI | HL-60 | 98791230 | 98791415 |
| chr9 | 98790767 | 98792591 | SKIL | K-562 | 98791270 | 98791870 |
| chr9 | 98781965 | 98790676 | SMAD1 | K-562 | 98782169 | 98782319 |
| chr9 | 98781965 | 98790676 | SMAD1 | K-562 | 98789859 | 98790066 |
| chr9 | 98790767 | 98792591 | SMAD1 | Hep-G2 | 98791216 | 98791500 |
| chr9 | 98793980 | 98796321 | SMAD1 | Hep-G2 | 98795540 | 98795709 |
| chr9 | 98793980 | 98796321 | SMAD1 | Hep-G2 | 98795989 | 98796274 |
| chr9 | 98790767 | 98792591 | SMAD3 | BG03,HCC1954,NCI-H441,PC-3,Hep-G2 | 98791162 | 98791420 |
| chr9 | 98793980 | 98796321 | SMAD3 | Hep-G2 | 98796037 | 98796228 |
| chr9 | 98778854 | 98779361 | SMAD4 | Caco-2 | 98779068 | 98779209 |
| chr9 | 98781965 | 98790676 | SMAD4 | Caco-2 | 98782019 | 98782406 |
| chr9 | 98781965 | 98790676 | SMAD4 | HGrC1 | 98784458 | 98784617 |
| chr9 | 98790767 | 98792591 | SMAD4 | HGrC1,Caco-2 | 98791208 | 98791440 |
| chr9 | 98793980 | 98796321 | SMAD4 | Caco-2 | 98795969 | 98796195 |
| chr9 | 98781965 | 98790676 | SMAD5 | K-562 | 98789607 | 98790297 |
| chr9 | 98790767 | 98792591 | SMARCA2 | NPC | 98791145 | 98791472 |
| chr9 | 98778854 | 98779361 | SMARCA4 | MCF-7 | 98778962 | 98779354 |
| chr9 | 98781965 | 98790676 | SMARCA4 | BIN-67,A-549,BT-16 | 98781972 | 98782368 |
| chr9 | 98781965 | 98790676 | SMARCA4 | MCF-10A | 98784033 | 98784221 |
| chr9 | 98781965 | 98790676 | SMARCA4 | MCF-10A | 98785427 | 98785615 |
| chr9 | 98790767 | 98792591 | SMARCA4 | MCF-7,CTV-1,BT-16,K-562,BIN-67,Aska-SS,NPC,hiPSC,TTC-1240,A-549 | 98791177 | 98791474 |
| chr9 | 98790767 | 98792591 | SMARCA4 | K-562 | 98792058 | 98792271 |
| chr9 | 98793980 | 98796321 | SMARCA4 | endometrial-epithelial-cells | 98794290 | 98795068 |
| chr9 | 98790767 | 98792591 | SMARCA5 | MCF-7,K-562 | 98791110 | 98791814 |
| chr9 | 98793980 | 98796321 | SMARCA5 | K-562 | 98795174 | 98795471 |
| chr9 | 98781965 | 98790676 | SMARCB1 | HeLa-S3 | 98783966 | 98784135 |
| chr9 | 98781965 | 98790676 | SMARCB1 | HeLa-S3 | 98790183 | 98790379 |
| chr9 | 98790767 | 98792591 | SMARCB1 | proliferating-human-fibroblast,HeLa-S3,hiPSC,MCF-7 | 98791118 | 98791505 |
| chr9 | 98790767 | 98792591 | SMARCC1 | TTC-1240,BIN-67,SCCOHT-1,hiPSC,TTC-549,SYO-1,Aska-SS | 98791164 | 98791468 |
| chr9 | 98793980 | 98796321 | SMARCC1 | BIN-67 | 98794842 | 98795039 |
| chr9 | 98793980 | 98796321 | SMARCC1 | BIN-67 | 98795658 | 98795862 |
| chr9 | 98790767 | 98792591 | SMARCE1 | MCF-7,K-562 | 98791142 | 98791522 |
| chr9 | 98790767 | 98792591 | SMARCE1 | K-562 | 98791926 | 98792165 |
| chr9 | 98793980 | 98796321 | SMARCE1 | K-562 | 98795189 | 98795659 |
| chr9 | 98781965 | 98790676 | SNAI2 | PC-9 | 98782259 | 98782804 |
| chr9 | 98790767 | 98792591 | SNAI2 | PC-9 | 98790806 | 98791181 |
| chr9 | 98793980 | 98796321 | SNAI2 | PC-9 | 98795843 | 98796206 |
| chr9 | 98790767 | 98792591 | SOX4 | MDA-MB-231 | 98791134 | 98791461 |
| chr9 | 98790767 | 98792591 | SOX6 | K-562 | 98791247 | 98791479 |
| chr9 | 98781965 | 98790676 | SOX8 | RH4 | 98783919 | 98784176 |
| chr9 | 98790767 | 98792591 | SOX8 | RH4 | 98791085 | 98791295 |
| chr9 | 98781965 | 98790676 | SP1 | A-549,HCT-116 | 98782002 | 98782314 |
| chr9 | 98790767 | 98792591 | SP1 | GM12878,A-549,WA01,HCT-116,Hep-G2 | 98791251 | 98791418 |
| chr9 | 98790767 | 98792591 | SP3 | HEK293 | 98791162 | 98791491 |
| chr9 | 98790767 | 98792591 | SP4 | HEK293 | 98791246 | 98791429 |
| chr9 | 98790767 | 98792591 | SP7 | HEK293 | 98791215 | 98791535 |
| chr9 | 98793980 | 98796321 | SP7 | HEK293 | 98795689 | 98796112 |
| chr9 | 98790767 | 98792591 | SPDEF | MCF-7 | 98791183 | 98791446 |
| chr9 | 98781965 | 98790676 | SPI1 | monocyte,K-562 | 98782189 | 98782338 |
| chr9 | 98790767 | 98792591 | SPI1 | CTV-1 | 98791235 | 98791448 |
| chr9 | 98792920 | 98793719 | SPI1 | primary-neutrophil | 98793287 | 98793428 |
| chr9 | 98793980 | 98796321 | SREBF1 | MCF-7 | 98795886 | 98796249 |
| chr9 | 98790767 | 98792591 | STAT1 | CD14 | 98791250 | 98791416 |
| chr9 | 98781965 | 98790676 | STAT3 | HCC1187,HCC1937,MDA-MB-468,HeLa-S3,HCC70 | 98782079 | 98782373 |
| chr9 | 98781965 | 98790676 | STAT3 | HCC70 | 98782503 | 98782655 |
| chr9 | 98781965 | 98790676 | STAT3 | WA01 | 98783887 | 98784097 |
| chr9 | 98781965 | 98790676 | STAT3 | WA01 | 98790103 | 98790516 |
| chr9 | 98790767 | 98792591 | STAT3 | HCC1187,BT-474,MDA-MB-231,HCC1937,monocyte,MCF10A-Er-Src,MCF-7,MDA-MB-468,MDA-MB-157,TMD8,MCF-10A,SUM159PT,HCC70 | 98791184 | 98791418 |
| chr9 | 98790767 | 98792591 | STAT5A | MV4-11 | 98791273 | 98791416 |
| chr9 | 98793980 | 98796321 | STAT5B | CD8 | 98796105 | 98796320 |
| chr9 | 98781965 | 98790676 | SUPT5H | DLD-1 | 98782095 | 98782358 |
| chr9 | 98790767 | 98792591 | SUPT5H | DLD-1 | 98791039 | 98791389 |
| chr9 | 98793980 | 98796321 | SUPT5H | DLD-1 | 98795488 | 98795690 |
| chr9 | 98793980 | 98796321 | SUPT6H | HCT-116 | 98795613 | 98796081 |
| chr9 | 98781965 | 98790676 | TAF1 | K-562 | 98789925 | 98790110 |
| chr9 | 98790767 | 98792591 | TAF1 | WA01,SK-N-SH | 98791266 | 98791418 |
| chr9 | 98790767 | 98792591 | TAF1 | WA01 | 98791687 | 98791818 |
| chr9 | 98793980 | 98796321 | TAF1 | K-562,WA01,Hep-G2,Ishikawa | 98796053 | 98796308 |
| chr9 | 98781965 | 98790676 | TAF7 | K-562 | 98789777 | 98790309 |
| chr9 | 98790767 | 98792591 | TAL1 | ProEs,K-562 | 98791249 | 98791400 |
| chr9 | 98781965 | 98790676 | TARDBP | K-562 | 98789885 | 98790071 |
| chr9 | 98781965 | 98790676 | TARDBP | Hep-G2 | 98790235 | 98790447 |
| chr9 | 98790767 | 98792591 | TARDBP | K-562 | 98791206 | 98791415 |
| chr9 | 98793980 | 98796321 | TARDBP | K-562 | 98795425 | 98795807 |
| chr9 | 98781965 | 98790676 | TBP | HeLa-S3 | 98782129 | 98782311 |
| chr9 | 98781965 | 98790676 | TBP | K-562 | 98789712 | 98790033 |
| chr9 | 98790767 | 98792591 | TBP | WA01 | 98791281 | 98791520 |
| chr9 | 98790767 | 98792591 | TBX21 | Th1 | 98791260 | 98791384 |
| chr9 | 98792920 | 98793719 | TBX21 | GM12878 | 98793089 | 98793354 |
| chr9 | 98793980 | 98796321 | TBX2 | Hep-G2 | 98796083 | 98796271 |
| chr9 | 98781965 | 98790676 | TCF12 | A-549,Ishikawa,Kasumi-1 | 98782166 | 98782391 |
| chr9 | 98790767 | 98792591 | TCF12 | Ishikawa,A-549,WA01,GM12878,Kasumi-1 | 98791222 | 98791420 |
| chr9 | 98790767 | 98792591 | TCF12 | Ishikawa | 98791637 | 98791955 |
| chr9 | 98793980 | 98796321 | TCF12 | A-549 | 98794838 | 98795034 |
| chr9 | 98793980 | 98796321 | TCF12 | A-549 | 98795971 | 98796137 |
| chr9 | 98793980 | 98796321 | TCF12 | Ishikawa,Kasumi-1 | 98796063 | 98796256 |
| chr9 | 98790767 | 98792591 | TCF21 | HCASMC | 98791161 | 98791374 |
| chr9 | 98781965 | 98790676 | TCF3 | K-562 | 98781993 | 98782287 |
| chr9 | 98790767 | 98792591 | TCF3 | K-562,Kasumi-1 | 98790886 | 98791684 |
| chr9 | 98793980 | 98796321 | TCF3 | Kasumi-1 | 98795832 | 98795996 |
| chr9 | 98793980 | 98796321 | TCF3 | GM12878 | 98796124 | 98796231 |
| chr9 | 98781965 | 98790676 | TCF4 | LS180 | 98781992 | 98782116 |
| chr9 | 98781965 | 98790676 | TCF7 | breast-organoid | 98790010 | 98790541 |
| chr9 | 98790767 | 98792591 | TCF7 | K-562 | 98791288 | 98791401 |
| chr9 | 98790767 | 98792591 | TCF7L2 | K-562 | 98791181 | 98791323 |
| chr9 | 98790767 | 98792591 | TCF7L2 | LNCaP | 98791254 | 98791433 |
| chr9 | 98790767 | 98792591 | TEAD1 | HEK293,keratinocyte,MSTO,H69,HUCCT1,K-562,pancreas,adipocyte,CCLP1 | 98791147 | 98791546 |
| chr9 | 98790767 | 98792591 | TEAD1 | HEK293 | 98791780 | 98791929 |
| chr9 | 98793980 | 98796321 | TEAD1 | H69 | 98795369 | 98795609 |
| chr9 | 98790767 | 98792591 | TEAD2 | K-562 | 98791108 | 98791571 |
| chr9 | 98790767 | 98792591 | TEAD4 | A-549,SK-N-BE2,MDA-MB-231,MKN28,HUCCT1,hMSC-TERT4,PC-9,MCF-7,hESC,MCF-10A,SNU-216,Hep-G2,T-47D,BE2C,HEK293,SK-MEL-147,BJ,SK-N-SH,HCT-116,Ishikawa | 98791158 | 98791536 |
| chr9 | 98790767 | 98792591 | TEAD4 | Ishikawa | 98791652 | 98791943 |
| chr9 | 98793980 | 98796321 | TEAD4 | PC-9 | 98795333 | 98795665 |
| chr9 | 98781965 | 98790676 | TFAP2C | HCC1954 | 98782151 | 98782344 |
| chr9 | 98790767 | 98792591 | TFAP2C | UCLA1-hESCs,MCF-7,HCC1954 | 98791200 | 98791464 |
| chr9 | 98793980 | 98796321 | TFAP2C | UCLA1-hESCs,MCF-7 | 98795914 | 98796252 |
| chr9 | 98790767 | 98792591 | TFAP4 | DLD-1 | 98791053 | 98791454 |
| chr9 | 98793980 | 98796321 | TFAP4 | Hep-G2,LNCaP | 98795992 | 98796226 |
| chr9 | 98790767 | 98792591 | TFDP2 | Hep-G2 | 98791209 | 98791437 |
| chr9 | 98778854 | 98779361 | TFE3 | Hep-G2 | 98778896 | 98779181 |
| chr9 | 98790767 | 98792591 | TFE3 | Hep-G2 | 98791266 | 98791450 |
| chr9 | 98781965 | 98790676 | TP53 | SW480,MCF-10A | 98782044 | 98782325 |
| chr9 | 98790767 | 98792591 | TP53 | U2OS,MCF-7,IMR-90,SW480,MDA-MB-231,SaOS-2 | 98791182 | 98791466 |
| chr9 | 98790767 | 98792591 | TRIM22 | GM12878,MCF-7 | 98791144 | 98791552 |
| chr9 | 98790767 | 98792591 | TRIM24 | MOLM-13 | 98791201 | 98791396 |
| chr9 | 98781965 | 98790676 | TRIM25 | BT-549 | 98790198 | 98790421 |
| chr9 | 98781965 | 98790676 | TRIM28 | K-562 | 98789909 | 98790074 |
| chr9 | 98790767 | 98792591 | TRIM28 | K-562 | 98791233 | 98791418 |
| chr9 | 98790767 | 98792591 | TRPS1 | T-47D,MCF-7 | 98791198 | 98791398 |
| chr9 | 98790767 | 98792591 | TWIST1 | SHEP-21N | 98791241 | 98791402 |
| chr9 | 98781965 | 98790676 | USF2 | HeLa-S3 | 98782107 | 98782290 |
| chr9 | 98790767 | 98792591 | USF2 | IMR-90 | 98791191 | 98791343 |
| chr9 | 98781965 | 98790676 | VDR | THP-1,LS180 | 98782166 | 98782356 |
| chr9 | 98790767 | 98792591 | VDR | kidney-cortex | 98791770 | 98792063 |
| chr9 | 98790767 | 98792591 | WT1 | HEK293 | 98791195 | 98791426 |
| chr9 | 98790767 | 98792591 | XRCC5 | K-562 | 98791145 | 98791554 |
| chr9 | 98790767 | 98792591 | XRCC5 | K-562 | 98792269 | 98792466 |
| chr9 | 98781965 | 98790676 | YY1 | Huh-7,HCT-116,Ishikawa | 98782024 | 98782236 |
| chr9 | 98781965 | 98790676 | YY1 | RH4 | 98783821 | 98784473 |
| chr9 | 98790767 | 98792591 | YY1 | RH4,Ishikawa,HCT-116,A-549,GM12892,K-562,WA01,GM12891 | 98791259 | 98791431 |
| chr9 | 98790767 | 98792591 | YY1 | Hep-G2 | 98791724 | 98791956 |
| chr9 | 98793980 | 98796321 | YY1 | Ishikawa,K-562,Hep-G2,WA01,GM12891 | 98796065 | 98796238 |
| chr9 | 98790767 | 98792591 | ZBTB20 | HEK293 | 98791162 | 98791616 |
| chr9 | 98793980 | 98796321 | ZBTB26 | HEK293 | 98795970 | 98796294 |
| chr9 | 98790767 | 98792591 | ZBTB2 | GM12878,K-562,Hep-G2 | 98791166 | 98791483 |
| chr9 | 98790767 | 98792591 | ZBTB33 | K-562 | 98791276 | 98792327 |
| chr9 | 98792920 | 98793719 | ZBTB33 | K-562 | 98793360 | 98793700 |
| chr9 | 98793980 | 98796321 | ZBTB40 | K-562 | 98795341 | 98796212 |
| chr9 | 98781965 | 98790676 | ZBTB7A | K-562 | 98789923 | 98790087 |
| chr9 | 98781965 | 98790676 | ZBTB7A | K-562 | 98790015 | 98790156 |
| chr9 | 98781965 | 98790676 | ZBTB7A | VCaP | 98790203 | 98790565 |
| chr9 | 98790767 | 98792591 | ZBTB7A | K-562 | 98791300 | 98791566 |
| chr9 | 98790767 | 98792591 | ZBTB7A | K-562 | 98791650 | 98791741 |
| chr9 | 98790767 | 98792591 | ZBTB7A | K-562 | 98791866 | 98791985 |
| chr9 | 98793980 | 98796321 | ZBTB7A | K-562,VCaP,Hep-G2 | 98796008 | 98796263 |
| chr9 | 98790767 | 98792591 | ZBTB7B | Hep-G2 | 98791281 | 98791472 |
| chr9 | 98793980 | 98796321 | ZBTB7B | Hep-G2 | 98796005 | 98796303 |
| chr9 | 98790767 | 98792591 | ZFP36 | K-562 | 98791293 | 98791427 |
| chr9 | 98793980 | 98796321 | ZFP36 | K-562 | 98795262 | 98795578 |
| chr9 | 98793980 | 98796321 | ZFP64 | HEK293 | 98794772 | 98795020 |
| chr9 | 98793980 | 98796321 | ZFP64 | Hep-G2,HEK293 | 98795976 | 98796312 |
| chr9 | 98778854 | 98779361 | ZFY | Hep-G2 | 98778900 | 98779031 |
| chr9 | 98790767 | 98792591 | ZFY | Hep-G2 | 98791314 | 98791443 |
| chr9 | 98790767 | 98792591 | ZHX1 | K-562,HeLa-S3 | 98791220 | 98791381 |
| chr9 | 98781965 | 98790676 | ZKSCAN1 | K-562 | 98790026 | 98790216 |
| chr9 | 98781965 | 98790676 | ZKSCAN1 | K-562 | 98790344 | 98790482 |
| chr9 | 98790767 | 98792591 | ZKSCAN1 | K-562 | 98791192 | 98791406 |
| chr9 | 98790767 | 98792591 | ZNF143 | GM12878,HeLa-S3,Hep-G2,K-562,MCF-7,WA01 | 98791218 | 98791446 |
| chr9 | 98793980 | 98796321 | ZNF143 | FLP76,MCF-7,FLP143HA | 98795399 | 98795621 |
| chr9 | 98793980 | 98796321 | ZNF143 | MCF-7,Hep-G2 | 98796100 | 98796262 |
| chr9 | 98793980 | 98796321 | ZNF16 | HEK293 | 98795151 | 98795605 |
| chr9 | 98790767 | 98792591 | ZNF175 | Hep-G2 | 98791278 | 98791402 |
| chr9 | 98790767 | 98792591 | ZNF184 | K-562 | 98791193 | 98791569 |
| chr9 | 98793980 | 98796321 | ZNF189 | HEK293 | 98796016 | 98796278 |
| chr9 | 98790767 | 98792591 | ZNF18 | K-562 | 98791237 | 98791402 |
| chr9 | 98778854 | 98779361 | ZNF217 | Hep-G2 | 98778919 | 98779179 |
| chr9 | 98790767 | 98792591 | ZNF217 | MCF-7,Hep-G2 | 98791158 | 98791483 |
| chr9 | 98793980 | 98796321 | ZNF217 | Hep-G2 | 98796056 | 98796216 |
| chr9 | 98793980 | 98796321 | ZNF232 | Hep-G2 | 98796062 | 98796239 |
| chr9 | 98790767 | 98792591 | ZNF24 | HEK293 | 98791182 | 98791440 |
| chr9 | 98793980 | 98796321 | ZNF24 | MCF-7 | 98796025 | 98796285 |
| chr9 | 98790767 | 98792591 | ZNF257 | HEK293,HEK293T | 98791226 | 98791394 |
| chr9 | 98781965 | 98790676 | ZNF263 | K-562 | 98786747 | 98787189 |
| chr9 | 98781965 | 98790676 | ZNF263 | K-562 | 98787778 | 98788068 |
| chr9 | 98793980 | 98796321 | ZNF274 | Hep-G2 | 98796053 | 98796259 |
| chr9 | 98790767 | 98792591 | ZNF281 | K-562 | 98791213 | 98791908 |
| chr9 | 98790767 | 98792591 | ZNF281 | K-562 | 98792128 | 98792386 |
| chr9 | 98781965 | 98790676 | ZNF283 | HEK293T | 98787092 | 98787392 |
| chr9 | 98790767 | 98792591 | ZNF283 | HEK293T | 98791514 | 98791671 |
| chr9 | 98790767 | 98792591 | ZNF2 | HEK293 | 98791174 | 98791535 |
| chr9 | 98781965 | 98790676 | ZNF300 | HEK293T | 98784203 | 98784499 |
| chr9 | 98790767 | 98792591 | ZNF324 | HEK293 | 98791249 | 98791537 |
| chr9 | 98790767 | 98792591 | ZNF335 | HEK293 | 98791108 | 98791480 |
| chr9 | 98790767 | 98792591 | ZNF35 | HEK293 | 98791264 | 98791441 |
| chr9 | 98790767 | 98792591 | ZNF366 | HEK293 | 98791215 | 98791503 |
| chr9 | 98790767 | 98792591 | ZNF366 | HEK293 | 98791884 | 98792257 |
| chr9 | 98781965 | 98790676 | ZNF383 | HEK293T | 98789915 | 98790149 |
| chr9 | 98790767 | 98792591 | ZNF384 | K-562 | 98791275 | 98791410 |
| chr9 | 98781965 | 98790676 | ZNF3 | K-562 | 98789955 | 98790336 |
| chr9 | 98790767 | 98792591 | ZNF407 | Hep-G2 | 98791207 | 98791392 |
| chr9 | 98793980 | 98796321 | ZNF407 | Hep-G2 | 98796050 | 98796296 |
| chr9 | 98790767 | 98792591 | ZNF444 | MCF-7 | 98791057 | 98791555 |
| chr9 | 98790767 | 98792591 | ZNF462 | GM23338 | 98791265 | 98791563 |
| chr9 | 98781965 | 98790676 | ZNF467 | HEK293 | 98783128 | 98783285 |
| chr9 | 98790767 | 98792591 | ZNF467 | HEK293 | 98791201 | 98791349 |
| chr9 | 98790767 | 98792591 | ZNF501 | Hep-G2 | 98791236 | 98791493 |
| chr9 | 98793980 | 98796321 | ZNF501 | Hep-G2 | 98795888 | 98796186 |
| chr9 | 98793980 | 98796321 | ZNF550 | Hep-G2 | 98796130 | 98796308 |
| chr9 | 98790767 | 98792591 | ZNF554 | HEK293 | 98791187 | 98791381 |
| chr9 | 98790767 | 98792591 | ZNF592 | K-562 | 98791209 | 98791588 |
| chr9 | 98781965 | 98790676 | ZNF90 | HEK293T | 98790064 | 98790358 |
| chr9 | 98793980 | 98796321 | ZNF90 | HEK293T | 98794192 | 98794535 |
| chr9 | 98793980 | 98796321 | ZNF92 | retina | 98795227 | 98795509 |