| SE element chr | SE element start | SE element start | TF | TF biosample name | TF end | TF start |
|---|---|---|---|---|---|---|
| chr9 | 127018604 | 127023474 | ADNP | K-562 | 127020688 | 127020968 |
| chr9 | 126984547 | 126987975 | AFF1 | K-562 | 126985140 | 126985367 |
| chr9 | 126984547 | 126987975 | AFF4 | HeLa | 126985150 | 126985337 |
| chr9 | 126984547 | 126987975 | AFF4 | HeLa,CD4 | 126985946 | 126986086 |
| chr9 | 127003254 | 127010000 | AHR | GM01310 | 127005390 | 127005725 |
| chr9 | 126984547 | 126987975 | APC | HCT-116 | 126985796 | 126986205 |
| chr9 | 126984547 | 126987975 | AR | prostate,prostate-cancer,LNCaP,breast | 126985136 | 126985360 |
| chr9 | 126984547 | 126987975 | AR | prostate-cancer | 126985693 | 126985783 |
| chr9 | 126984547 | 126987975 | AR | prostate,MDA-MB-453,PC-3,THP-1,VCaP,LNCaP,breast-cancer,prostate-cancer | 126985822 | 126986073 |
| chr9 | 126984547 | 126987975 | AR | PC-3,prostate,DU145,LHSAR | 126986590 | 126986824 |
| chr9 | 126984547 | 126987975 | AR | 22Rv1 | 126987012 | 126987230 |
| chr9 | 127003254 | 127010000 | AR | MCF-7,prostate | 127005358 | 127005633 |
| chr9 | 127003254 | 127010000 | AR | MCF-7 | 127007681 | 127007849 |
| chr9 | 127018604 | 127023474 | AR | VCaP,LNCaP | 127019638 | 127019856 |
| chr9 | 127018604 | 127023474 | AR | prostate,endometrial-stromal-cell | 127021728 | 127021992 |
| chr9 | 127018604 | 127023474 | AR | MCF-7 | 127022526 | 127022708 |
| chr9 | 126984547 | 126987975 | ARID1A | endometrial-epithelial-cells | 126984986 | 126985220 |
| chr9 | 126984547 | 126987975 | ARID1A | endometrial-epithelial-cells,12Z | 126985682 | 126986264 |
| chr9 | 127003254 | 127010000 | ARID1A | MCF-7 | 127005317 | 127005650 |
| chr9 | 127018604 | 127023474 | ARID1A | NGP | 127021655 | 127022225 |
| chr9 | 126984547 | 126987975 | ARID1B | K-562 | 126985007 | 126985456 |
| chr9 | 126984547 | 126987975 | ARID1B | K-562 | 126985822 | 126986070 |
| chr9 | 126984547 | 126987975 | ARID3A | GM12878 | 126985889 | 126986116 |
| chr9 | 126999412 | 127000388 | ARID3A | GM12878 | 126999751 | 127000158 |
| chr9 | 127003254 | 127010000 | ARID3A | GM12878 | 127005393 | 127005515 |
| chr9 | 126984547 | 126987975 | ARID5B | Jurkat | 126985758 | 126986351 |
| chr9 | 127003254 | 127010000 | ARID5B | Jurkat | 127005357 | 127005596 |
| chr9 | 126984547 | 126987975 | ARNT | SK-MEL-28,GM12878 | 126985855 | 126986151 |
| chr9 | 126999412 | 127000388 | ARNT | GM12878 | 126999714 | 126999955 |
| chr9 | 127003254 | 127010000 | ARNT | GM12878 | 127005179 | 127005627 |
| chr9 | 126984547 | 126987975 | ARNTL | U2OS | 126985032 | 126985320 |
| chr9 | 126984547 | 126987975 | ARNTL | U2OS | 126985777 | 126986360 |
| chr9 | 127003254 | 127010000 | ARNTL | U2OS | 127007614 | 127007788 |
| chr9 | 127018604 | 127023474 | ASCL1 | NCI-H889,NCI-H82 | 127021752 | 127021995 |
| chr9 | 126984547 | 126987975 | ASH2L | VCaP,GM12878 | 126985823 | 126986353 |
| chr9 | 127003254 | 127010000 | ASH2L | GM12878 | 127004994 | 127005965 |
| chr9 | 126984547 | 126987975 | ATF1 | K-562 | 126984944 | 126985444 |
| chr9 | 126984547 | 126987975 | ATF1 | K-562 | 126985914 | 126986086 |
| chr9 | 127018604 | 127023474 | ATF1 | K-562 | 127021723 | 127022101 |
| chr9 | 126984547 | 126987975 | ATF2 | GM12878 | 126985918 | 126986119 |
| chr9 | 126999412 | 127000388 | ATF2 | GM12878 | 126999772 | 127000100 |
| chr9 | 127003254 | 127010000 | ATF2 | GM12878 | 127005315 | 127005909 |
| chr9 | 126984547 | 126987975 | ATF3 | K-562 | 126985100 | 126985452 |
| chr9 | 126984547 | 126987975 | ATF3 | Hep-G2,HCT-116 | 126985873 | 126986117 |
| chr9 | 126984547 | 126987975 | ATF3 | Hep-G2 | 126986726 | 126986847 |
| chr9 | 127003254 | 127010000 | ATF3 | K-562 | 127005382 | 127005665 |
| chr9 | 127018604 | 127023474 | ATF3 | primary-dermal-fibroblasts,liver,K-562 | 127021787 | 127022026 |
| chr9 | 127003254 | 127010000 | ATF4 | Jurkat | 127005276 | 127005609 |
| chr9 | 127018604 | 127023474 | ATF4 | K-562 | 127021797 | 127022057 |
| chr9 | 126984547 | 126987975 | ATF7 | K-562 | 126984990 | 126985390 |
| chr9 | 126984547 | 126987975 | ATF7 | GM12878,K-562 | 126985772 | 126986390 |
| chr9 | 126999412 | 127000388 | ATF7 | GM12878 | 126999713 | 127000239 |
| chr9 | 127003254 | 127010000 | ATF7 | GM12878 | 127003513 | 127003781 |
| chr9 | 127003254 | 127010000 | ATF7 | GM12878 | 127004799 | 127006026 |
| chr9 | 127003254 | 127010000 | ATF7 | GM12878 | 127007552 | 127008417 |
| chr9 | 127018604 | 127023474 | ATF7 | GM12878 | 127020037 | 127020550 |
| chr9 | 126984547 | 126987975 | BACH1 | GM12878 | 126985883 | 126986120 |
| chr9 | 126984547 | 126987975 | BCL11A | CD34,GM12878,HUDEP-2 | 126985903 | 126986082 |
| chr9 | 127003254 | 127010000 | BCL11A | GM12878 | 127005004 | 127005195 |
| chr9 | 127003254 | 127010000 | BCL11A | GM12878 | 127005283 | 127005795 |
| chr9 | 127003254 | 127010000 | BCL11A | GM12878 | 127007640 | 127007816 |
| chr9 | 127003254 | 127010000 | BCL11A | GM12878 | 127007910 | 127008109 |
| chr9 | 126984547 | 126987975 | BCL11B | PBMC,thymus | 126985918 | 126986196 |
| chr9 | 127003254 | 127010000 | BCL11B | PBMC,thymus | 127005434 | 127005636 |
| chr9 | 126984547 | 126987975 | BCL3 | GM12878 | 126985926 | 126986092 |
| chr9 | 127003254 | 127010000 | BCL3 | GM12878 | 127005381 | 127005644 |
| chr9 | 126984547 | 126987975 | BCL6 | CD4,SU-DHL-4,RS4-11,OCI-Ly1 | 126985862 | 126986156 |
| chr9 | 126984547 | 126987975 | BCL6 | OCI-Ly1 | 126986307 | 126986520 |
| chr9 | 127003254 | 127010000 | BCL6 | SU-DHL-4 | 127005258 | 127005743 |
| chr9 | 127018604 | 127023474 | BCOR | K-562 | 127020659 | 127021062 |
| chr9 | 126984547 | 126987975 | CASZ1 | rhabdomyosarcoma | 126985866 | 126986226 |
| chr9 | 127018604 | 127023474 | CBFA2T2 | K-562 | 127021728 | 127022005 |
| chr9 | 126984547 | 126987975 | CBFA2T3 | K-562 | 126985113 | 126985360 |
| chr9 | 126984547 | 126987975 | CBFA2T3 | U-937,Kasumi-1 | 126985936 | 126986140 |
| chr9 | 126984547 | 126987975 | CBFB | ME-1,GM12878,SaOS-2 | 126985880 | 126986221 |
| chr9 | 126999412 | 127000388 | CBFB | GM12878 | 126999760 | 126999892 |
| chr9 | 127003254 | 127010000 | CBFB | GM12878 | 127005299 | 127005906 |
| chr9 | 126984547 | 126987975 | CBX3 | HCT-116 | 126985875 | 126986134 |
| chr9 | 127003254 | 127010000 | CBX8 | K-562 | 127005310 | 127005538 |
| chr9 | 127018604 | 127023474 | CBX8 | K-562 | 127020075 | 127020359 |
| chr9 | 126984547 | 126987975 | CDX2 | LS180 | 126985818 | 126986070 |
| chr9 | 126984547 | 126987975 | CDX2 | LS180 | 126986084 | 126986242 |
| chr9 | 126984547 | 126987975 | CDX2 | COLO-320 | 126986357 | 126986459 |
| chr9 | 126984547 | 126987975 | CEBPA | Kasumi-1,SKH1,U-937,MV4-11,THP-1 | 126985879 | 126986153 |
| chr9 | 127003254 | 127010000 | CEBPA | T-47D | 127004274 | 127004560 |
| chr9 | 127003254 | 127010000 | CEBPA | MV4-11,T-47D | 127005316 | 127005648 |
| chr9 | 127018604 | 127023474 | CEBPA | Hep-G2,T-47D,THP-1 | 127019048 | 127019249 |
| chr9 | 127018604 | 127023474 | CEBPA | THP-1 | 127020881 | 127020973 |
| chr9 | 126984547 | 126987975 | CEBPB | MV4-11,HCT-116,HL-60,MCF-7,monocyte,THP-1 | 126985896 | 126986177 |
| chr9 | 127003254 | 127010000 | CEBPB | MCF-7,THP-1,GM12878 | 127005405 | 127005616 |
| chr9 | 127003254 | 127010000 | CEBPB | THP-1 | 127005494 | 127005773 |
| chr9 | 127018604 | 127023474 | CEBPB | K-562,HFOB,hMSC,MCF-7,A-549 | 127019028 | 127019219 |
| chr9 | 127018604 | 127023474 | CEBPB | hMSC,HFOB | 127021758 | 127022092 |
| chr9 | 127018604 | 127023474 | CEBPD | HAEC | 127019001 | 127019196 |
| chr9 | 127003254 | 127010000 | CEBPG | K-562 | 127005372 | 127005696 |
| chr9 | 127018604 | 127023474 | CEBPG | K-562 | 127021737 | 127022154 |
| chr9 | 126984547 | 126987975 | CHD1 | HeLa-S3 | 126985021 | 126985146 |
| chr9 | 126984547 | 126987975 | CHD2 | HeLa-S3 | 126985049 | 126985357 |
| chr9 | 126984547 | 126987975 | CHD2 | HeLa-S3 | 126985931 | 126986085 |
| chr9 | 127003254 | 127010000 | CHD2 | GM12878 | 127005366 | 127005609 |
| chr9 | 127018604 | 127023474 | CHD2 | SK-N-SH | 127021698 | 127022012 |
| chr9 | 126984547 | 126987975 | CHD4 | HaCaT | 126985445 | 126985593 |
| chr9 | 126984547 | 126987975 | CHD4 | HaCaT,keratinocyte | 126985760 | 126986078 |
| chr9 | 126984547 | 126987975 | CHD4 | HaCaT | 126986154 | 126986319 |
| chr9 | 127018604 | 127023474 | CHD7 | hiPSC | 127021848 | 127022079 |
| chr9 | 127003254 | 127010000 | CHD8 | T-47D | 127005360 | 127005523 |
| chr9 | 127003254 | 127010000 | CLOCK | BA10 | 127003962 | 127004115 |
| chr9 | 127018604 | 127023474 | CLOCK | BA40 | 127021780 | 127021952 |
| chr9 | 126984547 | 126987975 | CREB1 | A-549 | 126985061 | 126985246 |
| chr9 | 126984547 | 126987975 | CREB1 | LNCaP-abl | 126985836 | 126986123 |
| chr9 | 127003254 | 127010000 | CREB1 | GM12878 | 127005056 | 127005239 |
| chr9 | 127003254 | 127010000 | CREB1 | GM12878 | 127005332 | 127005688 |
| chr9 | 127018604 | 127023474 | CREB1 | MCF-7,Hep-G2 | 127022954 | 127023280 |
| chr9 | 126984547 | 126987975 | CREB3 | K-562 | 126984848 | 126985199 |
| chr9 | 126984547 | 126987975 | CREB3 | K-562 | 126985895 | 126986183 |
| chr9 | 127018604 | 127023474 | CREB3 | K-562 | 127021731 | 127022015 |
| chr9 | 126984547 | 126987975 | CREB5 | LNCaP | 126984952 | 126985383 |
| chr9 | 126984547 | 126987975 | CREB5 | LNCaP | 126985804 | 126986100 |
| chr9 | 126984547 | 126987975 | CREBBP | PC-3 | 126984701 | 126984917 |
| chr9 | 126984547 | 126987975 | CREBBP | keratinocyte | 126984852 | 126985315 |
| chr9 | 126984547 | 126987975 | CREBBP | keratinocyte | 126985746 | 126986230 |
| chr9 | 126984547 | 126987975 | CREBBP | NCI-H3396,PC-3 | 126986355 | 126986663 |
| chr9 | 127003254 | 127010000 | CREBBP | keratinocyte | 127005346 | 127005562 |
| chr9 | 127018604 | 127023474 | CREBBP | retina,fibroblast | 127021601 | 127022168 |
| chr9 | 127018604 | 127023474 | CREBBP | PC-3 | 127022556 | 127022761 |
| chr9 | 126984547 | 126987975 | CREM | GM12878,K-562 | 126985912 | 126986114 |
| chr9 | 127003254 | 127010000 | CREM | GM12878 | 127005300 | 127005905 |
| chr9 | 127018604 | 127023474 | CRX | retina | 127021691 | 127021945 |
| chr9 | 126984547 | 126987975 | CRY1 | U2OS | 126985882 | 126986534 |
| chr9 | 126984547 | 126987975 | CTBP1 | K-562 | 126985011 | 126985407 |
| chr9 | 126984547 | 126987975 | CTBP1 | K-562 | 126985826 | 126986115 |
| chr9 | 126984547 | 126987975 | CTCF | SUM159 | 126985079 | 126985192 |
| chr9 | 126984547 | 126987975 | CTCF | lung,B-cell,osteoblast,Jurkat,pancreas,primary-glioblastoma,GM04648,OVCAR-8,fibroblast,GM06990,HeLa-Kyoto,SK-N-AS,HL-60,HeLa,K-562,SEM,ID00015,RH4,spleen,VCaP,GM04025,THP-1,MDA-MB-435,keratinocyte,SK-MEL-147,MM1-S,OCI-Ly1,Loucy,GM17942,RWPE-2,GM04604,ID00014,GM12869,primary-epidermal-keratinocyte,GM12867,GM12871,NB4,GM12878,GM09236,ID00016,GM06077,BC-3,GM09237,D54,MCF-10A,prostate,PC-3,HUDEP-2,DND41,MCF-7,GM12864,HeLa-S3,OCI-Ly3,786-O,NCI-H929,SU-DHL-6,GP5D,leukemia,GM10266,CUTLL1,plasmablast,HCT-116 | 126985896 | 126986203 |
| chr9 | 127003254 | 127010000 | CTCF | myotube,aorta,esophagus,thyroid-gland | 127005742 | 127005984 |
| chr9 | 127003254 | 127010000 | CTCF | GSC23 | 127006004 | 127006339 |
| chr9 | 127018604 | 127023474 | CTCF | nerve,heart,gastroesophageal-sphincter,retina,anterior-temporal-cortex,esophagus | 127021664 | 127022024 |
| chr9 | 127018604 | 127023474 | CTCF | BJ,gastroesophageal-sphincter,fibroblast | 127022141 | 127022284 |
| chr9 | 126984547 | 126987975 | DAXX | PC-3 | 126984921 | 126985401 |
| chr9 | 126984547 | 126987975 | DAXX | PC-3 | 126985836 | 126986215 |
| chr9 | 126984547 | 126987975 | DAXX | PC-3 | 126986704 | 126986924 |
| chr9 | 126984547 | 126987975 | DDX20 | K-562 | 126984922 | 126985361 |
| chr9 | 126984547 | 126987975 | DEK | HeLa-S3 | 126985847 | 126986216 |
| chr9 | 127018604 | 127023474 | DPF1 | K-562 | 127021763 | 127021928 |
| chr9 | 126984547 | 126987975 | DPF2 | GM12878 | 126985732 | 126986717 |
| chr9 | 127003254 | 127010000 | DPF2 | GM12878 | 127004793 | 127005757 |
| chr9 | 127003254 | 127010000 | DPF2 | GM12878 | 127007445 | 127008123 |
| chr9 | 127018604 | 127023474 | DPF2 | GM12878 | 127020039 | 127020465 |
| chr9 | 126984547 | 126987975 | DRAP1 | GM12878 | 126985983 | 126986194 |
| chr9 | 127003254 | 127010000 | DUX4 | WA01 | 127007693 | 127008000 |
| chr9 | 126984547 | 126987975 | E2F1 | K-562 | 126985024 | 126985373 |
| chr9 | 126984547 | 126987975 | E2F1 | MDA-MB-231,LNCaP,U-87MG,MCF-7 | 126985837 | 126986105 |
| chr9 | 127003254 | 127010000 | E2F1 | HeLa | 127007637 | 127007812 |
| chr9 | 127018604 | 127023474 | E2F1 | U-87MG | 127021781 | 127021895 |
| chr9 | 127018604 | 127023474 | E2F1 | K-562 | 127021830 | 127022061 |
| chr9 | 126984547 | 126987975 | E2F5 | K-562 | 126985104 | 126985287 |
| chr9 | 127003254 | 127010000 | E2F8 | GM12878 | 127004665 | 127005651 |
| chr9 | 127018604 | 127023474 | E2F8 | GM12878 | 127020089 | 127020417 |
| chr9 | 127018604 | 127023474 | EBF3 | SK-N-SH | 127021646 | 127021976 |
| chr9 | 126984547 | 126987975 | EGR1 | GM12878,macrophage,HL-60,HCT-116 | 126985860 | 126986126 |
| chr9 | 127003254 | 127010000 | EGR1 | GM12878 | 127005804 | 127005927 |
| chr9 | 126984547 | 126987975 | EHF | RWPE-1 | 126984896 | 126985426 |
| chr9 | 126984547 | 126987975 | EHF | RWPE-1,primary-bronchial-epithelial | 126985779 | 126986310 |
| chr9 | 126984547 | 126987975 | ELF1 | K-562,SK-N-MC,SEM,GM12878 | 126985895 | 126986132 |
| chr9 | 127003254 | 127010000 | ELF1 | GM12878 | 127005367 | 127005558 |
| chr9 | 126984547 | 126987975 | ELF3 | PDAC | 126984948 | 126985414 |
| chr9 | 126984547 | 126987975 | ELF3 | PDAC | 126985672 | 126986473 |
| chr9 | 127003254 | 127010000 | ELF3 | PDAC | 127009246 | 127009728 |
| chr9 | 126984547 | 126987975 | ELK1 | K-562 | 126985061 | 126985250 |
| chr9 | 126984547 | 126987975 | EP300 | K-562,HeLa-S3 | 126985023 | 126985368 |
| chr9 | 126984547 | 126987975 | EP300 | GM12878,697,AML,Kasumi-1,K-562,HeLa-S3,NB4 | 126985873 | 126986156 |
| chr9 | 126984547 | 126987975 | EP300 | PC-3 | 126986196 | 126986648 |
| chr9 | 127003254 | 127010000 | EP300 | GM12878,neural | 127005274 | 127005654 |
| chr9 | 127018604 | 127023474 | EP300 | fibroblast | 127021785 | 127022237 |
| chr9 | 126984547 | 126987975 | EPAS1 | PC-3 | 126985832 | 126986260 |
| chr9 | 126984547 | 126987975 | ERG | VCaP,Jurkat,ME-1,aortic-endothelial-cell,RWPE-1,SKNO-1,SEM,K-562,TSU-1621MT | 126985867 | 126986152 |
| chr9 | 127003254 | 127010000 | ERG | VCaP | 127004907 | 127005071 |
| chr9 | 127003254 | 127010000 | ERG | Jurkat | 127005217 | 127005729 |
| chr9 | 127018604 | 127023474 | ERG | HUVEC-C | 127023190 | 127023339 |
| chr9 | 126984547 | 126987975 | ESR1 | breast-cancer,MCF-7,SUM44PE,breast | 126985098 | 126985347 |
| chr9 | 126984547 | 126987975 | ESR1 | MCF-7 | 126985797 | 126986359 |
| chr9 | 127003254 | 127010000 | ESR1 | breast | 127005004 | 127005127 |
| chr9 | 127003254 | 127010000 | ESR1 | primary-breast-cancer,MCF-7,U2OS,breast-cancer,MCF-7-Luc,SUM44PE,MCF-7-Luc-Y537S,breast,T-47D | 127005308 | 127005605 |
| chr9 | 127003254 | 127010000 | ESR1 | Ishikawa | 127007650 | 127007899 |
| chr9 | 127018604 | 127023474 | ESR1 | MCF-7 | 127019646 | 127019818 |
| chr9 | 127018604 | 127023474 | ESR1 | Ishikawa | 127020646 | 127020886 |
| chr9 | 127018604 | 127023474 | ESR1 | MCF-7,endometrioid-adenocarcinoma | 127021768 | 127021978 |
| chr9 | 127018604 | 127023474 | ESR1 | MCF-7 | 127022588 | 127022831 |
| chr9 | 127018604 | 127023474 | ESR1 | breast | 127023076 | 127023279 |
| chr9 | 126984547 | 126987975 | ESRRA | K-562 | 126985040 | 126985366 |
| chr9 | 126984547 | 126987975 | ESRRA | K-562 | 126985900 | 126986194 |
| chr9 | 126984547 | 126987975 | ETS1 | CTV-1,HUVEC-C,CD4-pos,THP-6,SCC-25,786-O,GM12878 | 126985829 | 126986326 |
| chr9 | 127003254 | 127010000 | ETS1 | CTV-1,THP-6 | 127005244 | 127005687 |
| chr9 | 126984547 | 126987975 | ETV1 | A-375,K-562,COLO-800 | 126985837 | 126986171 |
| chr9 | 126984547 | 126987975 | ETV6 | K-562,Reh,GM12878 | 126985818 | 126986208 |
| chr9 | 127003254 | 127010000 | ETV6 | GM12878 | 127005142 | 127005805 |
| chr9 | 127018604 | 127023474 | ETV6 | GM12878 | 127020663 | 127020801 |
| chr9 | 126984547 | 126987975 | EVI1 | SKH1 | 126985864 | 126986228 |
| chr9 | 126984547 | 126987975 | EZH1 | ProEs | 126985923 | 126986097 |
| chr9 | 127003254 | 127010000 | EZH1 | ProEs | 127005074 | 127005227 |
| chr9 | 127018604 | 127023474 | EZH1 | ProEs | 127020662 | 127020847 |
| chr9 | 126984547 | 126987975 | EZH2 | RH30,Loucy,Jurkat,GM23248 | 126985847 | 126986236 |
| chr9 | 126984547 | 126987975 | EZH2 | SF8628 | 126986495 | 126986993 |
| chr9 | 127003254 | 127010000 | EZH2 | DND41 | 127008315 | 127008624 |
| chr9 | 127003254 | 127010000 | EZH2 | DND41 | 127009703 | 127009974 |
| chr9 | 127018604 | 127023474 | EZH2 | DND41 | 127020639 | 127020899 |
| chr9 | 126984547 | 126987975 | FLI1 | A-673 | 126985653 | 126986154 |
| chr9 | 126984547 | 126987975 | FLI1 | SKNO-1,CTV-1,NB4,A-673,HUVEC-C,SEM,UAE | 126985877 | 126986205 |
| chr9 | 126984547 | 126987975 | FOS | MV4-11,CFPAC-1,MG-63-3,MCF-10A,endothelial,HeLa-S3 | 126985783 | 126986228 |
| chr9 | 126984547 | 126987975 | FOS | MCF-10A,Hep-G2 | 126986744 | 126986882 |
| chr9 | 127003254 | 127010000 | FOS | CFPAC-1,CD4,IMR-90 | 127005512 | 127005725 |
| chr9 | 127003254 | 127010000 | FOS | CFPAC-1,IMR-90 | 127009421 | 127009642 |
| chr9 | 127018604 | 127023474 | FOS | leiomyoma,myometrium,IMR-90 | 127021811 | 127021981 |
| chr9 | 126984547 | 126987975 | FOSL1 | K-562 | 126985090 | 126985401 |
| chr9 | 126984547 | 126987975 | FOSL1 | MDA-MB-231,K-562,HCT-116 | 126985783 | 126986148 |
| chr9 | 126984547 | 126987975 | FOSL1 | K-562 | 126986722 | 126986988 |
| chr9 | 127003254 | 127010000 | FOSL1 | K-562,BT-549 | 127005415 | 127005740 |
| chr9 | 127003254 | 127010000 | FOSL1 | HCT-116 | 127009475 | 127009615 |
| chr9 | 126984547 | 126987975 | FOSL2 | LPS141 | 126985921 | 126986118 |
| chr9 | 126984547 | 126987975 | FOSL2 | A-549,Hep-G2 | 126986720 | 126986936 |
| chr9 | 127018604 | 127023474 | FOSL2 | NPC | 127021832 | 127022105 |
| chr9 | 126984547 | 126987975 | FOXA1 | T-47D,PDAC,LAPC-4,prostate-cancer,DU145,LNCaP,breast,MCF-7,LNCaP-C4-2B,CFPAC-1,LS180,NCI-H3122,A-549,MCF-7-TAMR-1,breast-cancer,prostate | 126985004 | 126985334 |
| chr9 | 126984547 | 126987975 | FOXA1 | ZR751,PDAC,LNCaP,LNCaP-C4-2B,CFPAC-1,LS180,A-549,breast-cancer,prostate | 126985766 | 126986098 |
| chr9 | 127003254 | 127010000 | FOXA1 | T-47D,PDAC,prostate | 127005232 | 127005523 |
| chr9 | 127003254 | 127010000 | FOXA1 | PDAC,CFPAC-1 | 127009307 | 127009781 |
| chr9 | 127018604 | 127023474 | FOXA1 | 22Rv1 | 127018618 | 127018815 |
| chr9 | 127018604 | 127023474 | FOXA1 | MCF-7-TAMR-1,MCF-7 | 127019715 | 127019834 |
| chr9 | 127018604 | 127023474 | FOXA1 | VCaP,breast | 127022994 | 127023339 |
| chr9 | 127018604 | 127023474 | FOXA1 | LNCaP | 127023204 | 127023315 |
| chr9 | 126984547 | 126987975 | FOXA2 | CFPAC-1 | 126984836 | 126985431 |
| chr9 | 126984547 | 126987975 | FOXA2 | CFPAC-1 | 126985728 | 126986174 |
| chr9 | 127003254 | 127010000 | FOXA2 | CFPAC-1 | 127005312 | 127005605 |
| chr9 | 127003254 | 127010000 | FOXA2 | CFPAC-1 | 127009315 | 127009762 |
| chr9 | 127018604 | 127023474 | FOXA2 | BJ1-hTERT | 127021839 | 127022127 |
| chr9 | 126984547 | 126987975 | FOXF1 | GIST48 | 126985153 | 126985331 |
| chr9 | 126984547 | 126987975 | FOXJ2 | K-562 | 126985079 | 126985347 |
| chr9 | 126984547 | 126987975 | FOXK2 | K-562 | 126985132 | 126985365 |
| chr9 | 126984547 | 126987975 | FOXL2 | HGrC1,KGN | 126985178 | 126985348 |
| chr9 | 126984547 | 126987975 | FOXL2 | HGrC1,KGN | 126985808 | 126986189 |
| chr9 | 126984547 | 126987975 | FOXL2 | HGrC1 | 126986412 | 126986652 |
| chr9 | 127003254 | 127010000 | FOXL2 | HGrC1 | 127004494 | 127004744 |
| chr9 | 126984547 | 126987975 | FOXM1 | GM12878 | 126985895 | 126986125 |
| chr9 | 126999412 | 127000388 | FOXM1 | GM12878 | 126999780 | 126999955 |
| chr9 | 127003254 | 127010000 | FOXM1 | GM12878 | 127005336 | 127005896 |
| chr9 | 127018604 | 127023474 | FOXM1 | GM12878 | 127020205 | 127020338 |
| chr9 | 127018604 | 127023474 | FOXP2 | PFSK1 | 127021850 | 127021957 |
| chr9 | 126984547 | 126987975 | GABPA | VCaP,HeLa-S3,HL-60 | 126985876 | 126986114 |
| chr9 | 127003254 | 127010000 | GABPA | GM12878 | 127004948 | 127005268 |
| chr9 | 127003254 | 127010000 | GABPA | GM12878 | 127005344 | 127005584 |
| chr9 | 126984547 | 126987975 | GATA1 | K-562,HUDEP-2 | 126985200 | 126985356 |
| chr9 | 126984547 | 126987975 | GATA1 | HUDEP-2,erythroid-progenitor,CD34,erythroid,K-562,erythroblast | 126985857 | 126986107 |
| chr9 | 126984547 | 126987975 | GATA2 | K-562,LNCaP | 126985138 | 126985379 |
| chr9 | 126984547 | 126987975 | GATA2 | TF1,CD34,LNCaP,endothelial,SKH1 | 126985857 | 126986183 |
| chr9 | 127003254 | 127010000 | GATA2 | ESF,primary-endometrial-stromal-cell | 127003474 | 127003656 |
| chr9 | 127003254 | 127010000 | GATA2 | TF1,K-562,primary-endometrial-stromal-cell,dermal-fibroblast | 127005346 | 127005566 |
| chr9 | 127018604 | 127023474 | GATA2 | primary-endometrial-stromal-cell | 127019118 | 127019289 |
| chr9 | 127018604 | 127023474 | GATA2 | ESF,SH-SY5Y,primary-endometrial-stromal-cell | 127021779 | 127022001 |
| chr9 | 126984547 | 126987975 | GATA3 | breast,MCF-7 | 126985010 | 126985350 |
| chr9 | 126984547 | 126987975 | GATA3 | thymocyte,Jurkat | 126985840 | 126986209 |
| chr9 | 126999412 | 127000388 | GATA3 | MCF-7 | 127000077 | 127000252 |
| chr9 | 127003254 | 127010000 | GATA3 | MCF-7,thymocyte,Jurkat,breast,T-47D,CD4 | 127005306 | 127005646 |
| chr9 | 126984547 | 126987975 | GATA4 | YCC-3,BJ1-hTERT | 126985040 | 126985284 |
| chr9 | 127003254 | 127010000 | GATA4 | BJ1-hTERT | 127009355 | 127009537 |
| chr9 | 127018604 | 127023474 | GATA4 | cardiomyocyte | 127021756 | 127021921 |
| chr9 | 126984547 | 126987975 | GATA6 | YCC-3,PATU8988,OACP4-C,AGS | 126985002 | 126985308 |
| chr9 | 126984547 | 126987975 | GATA6 | OACP4-C,HUES-8,YCC-3,AGS,PATU8988,HUG1N | 126985859 | 126986170 |
| chr9 | 127003254 | 127010000 | GATA6 | pancreatic-progenitor,endoderm | 127007674 | 127007995 |
| chr9 | 126984547 | 126987975 | GATAD2B | GM12878 | 126985781 | 126986301 |
| chr9 | 127003254 | 127010000 | GATAD2B | GM12878 | 127005120 | 127005486 |
| chr9 | 127003254 | 127010000 | GATAD2B | GM12878 | 127007684 | 127008049 |
| chr9 | 126984547 | 126987975 | GFI1B | K-562 | 126985233 | 126985362 |
| chr9 | 126984547 | 126987975 | GFI1B | K-562,SET-2 | 126985931 | 126986158 |
| chr9 | 127018604 | 127023474 | GFI1B | K-562 | 127021796 | 127021981 |
| chr9 | 126984547 | 126987975 | GFI1 | NB4 | 126985859 | 126986152 |
| chr9 | 127003254 | 127010000 | GRHL1 | MCF-7 | 127005205 | 127005435 |
| chr9 | 126984547 | 126987975 | GTF2F1 | HeLa-S3 | 126985062 | 126985260 |
| chr9 | 126984547 | 126987975 | GTF2F1 | HeLa-S3,GM12878 | 126985872 | 126986076 |
| chr9 | 127018604 | 127023474 | HAND2 | SK-N-BE2-C,CLB-Ga | 127021632 | 127022049 |
| chr9 | 127003254 | 127010000 | HCFC1 | GM12878 | 127005017 | 127005133 |
| chr9 | 126984547 | 126987975 | HDAC1 | K-562 | 126984948 | 126985443 |
| chr9 | 126984547 | 126987975 | HDAC1 | K-562,NB4 | 126985827 | 126986188 |
| chr9 | 126984547 | 126987975 | HDAC1 | PC-3 | 126986379 | 126986549 |
| chr9 | 127018604 | 127023474 | HDAC1 | K-562 | 127021707 | 127022013 |
| chr9 | 127018604 | 127023474 | HDAC1 | PC-3 | 127023294 | 127023469 |
| chr9 | 126984547 | 126987975 | HDAC2 | K-562 | 126985113 | 126985341 |
| chr9 | 126984547 | 126987975 | HDAC2 | RH4,pre-B-cell,K-562 | 126985915 | 126986163 |
| chr9 | 126984547 | 126987975 | HDAC2 | PC-3 | 126986384 | 126986688 |
| chr9 | 126984547 | 126987975 | HDAC2 | PC-3 | 126986390 | 126986743 |
| chr9 | 127003254 | 127010000 | HDAC2 | GM12878 | 127005173 | 127005424 |
| chr9 | 127003254 | 127010000 | HDAC2 | RH4 | 127007638 | 127007938 |
| chr9 | 127018604 | 127023474 | HDAC2 | K-562 | 127020751 | 127021057 |
| chr9 | 127018604 | 127023474 | HDAC2 | PC-3 | 127022609 | 127022820 |
| chr9 | 126984547 | 126987975 | HDAC3 | AML,RH4 | 126985901 | 126986138 |
| chr9 | 127003254 | 127010000 | HDAC3 | RH4 | 127005378 | 127005571 |
| chr9 | 126984547 | 126987975 | HDAC8 | K-562 | 126984979 | 126985305 |
| chr9 | 126984547 | 126987975 | HDAC8 | K-562 | 126985846 | 126986459 |
| chr9 | 127018604 | 127023474 | HDGF | K-562 | 127023061 | 127023315 |
| chr9 | 126984547 | 126987975 | HES1 | K-562 | 126985859 | 126986141 |
| chr9 | 126984547 | 126987975 | HEY1 | K-562 | 126985020 | 126985351 |
| chr9 | 126984547 | 126987975 | HIF1A | MDA-MB-231 | 126984840 | 126985116 |
| chr9 | 126984547 | 126987975 | HIF1A | U2OS,LNCaP | 126985047 | 126985274 |
| chr9 | 126984547 | 126987975 | HIF1A | macrophage | 126985274 | 126985339 |
| chr9 | 126984547 | 126987975 | HIF1A | BEAS-2B,PC-3 | 126985829 | 126986134 |
| chr9 | 126984547 | 126987975 | HLF | Hep-G2 | 126986752 | 126986883 |
| chr9 | 126984547 | 126987975 | HMBOX1 | K-562 | 126985928 | 126986183 |
| chr9 | 126984547 | 126987975 | HMBOX1 | K-562 | 126986836 | 126987006 |
| chr9 | 126984547 | 126987975 | HMGA1 | IMR-90 | 126985471 | 126985783 |
| chr9 | 126984547 | 126987975 | HNF4A | IM95,KATO-III | 126985006 | 126985312 |
| chr9 | 126984547 | 126987975 | HNF4A | GP5D,IM95,KATO-III,HCT-116 | 126985835 | 126986192 |
| chr9 | 126984547 | 126987975 | HNF4A | LoVo | 126986179 | 126986428 |
| chr9 | 126984547 | 126987975 | HNF4A | Caco-2,KATO-III,GP5D,Hep-G2,LoVo,IM95 | 126986513 | 126986966 |
| chr9 | 126984547 | 126987975 | HNF4G | Hep-G2 | 126986728 | 126986933 |
| chr9 | 126984547 | 126987975 | HOXB13 | prostate,LNCaP | 126985063 | 126985344 |
| chr9 | 126984547 | 126987975 | HOXB13 | prostate-cancer | 126985737 | 126985798 |
| chr9 | 126984547 | 126987975 | HOXB13 | prostate,prostate-cancer | 126985895 | 126986081 |
| chr9 | 127003254 | 127010000 | HOXB13 | prostate | 127003481 | 127003706 |
| chr9 | 127003254 | 127010000 | HOXB13 | prostate | 127005396 | 127005568 |
| chr9 | 126984547 | 126987975 | HOXB8 | CFPAC-1 | 126985081 | 126985357 |
| chr9 | 126984547 | 126987975 | HOXB8 | CFPAC-1 | 126985757 | 126986270 |
| chr9 | 126984547 | 126987975 | HSF1 | MO91 | 126985907 | 126986083 |
| chr9 | 126984547 | 126987975 | ID3 | K-562 | 126985865 | 126986497 |
| chr9 | 126984547 | 126987975 | ILF3 | K-562 | 126984989 | 126985221 |
| chr9 | 126984547 | 126987975 | IRF1 | AsPC-1,K-562,PDAC | 126985002 | 126985337 |
| chr9 | 126984547 | 126987975 | IRF1 | PDAC | 126985590 | 126986960 |
| chr9 | 127003254 | 127010000 | IRF1 | PDAC | 127009306 | 127009736 |
| chr9 | 126984547 | 126987975 | IRF2 | keratinocyte | 126985854 | 126986168 |
| chr9 | 126984547 | 126987975 | IRF2 | keratinocyte | 126986442 | 126986605 |
| chr9 | 126984547 | 126987975 | IRF4 | BC-3,U266 | 126985144 | 126985352 |
| chr9 | 126984547 | 126987975 | IRF4 | B-cell,NCI-H929,BC-3,KK-1,GM12878,T-cell,U266 | 126985866 | 126986156 |
| chr9 | 126999412 | 127000388 | IRF4 | BC-3 | 126999698 | 126999933 |
| chr9 | 127003254 | 127010000 | IRF4 | GM12878,T-cell | 127004979 | 127005192 |
| chr9 | 127003254 | 127010000 | IRF4 | B-cell,NCI-H929,BC-3,GM12878,T-cell,U266 | 127005289 | 127005649 |
| chr9 | 127003254 | 127010000 | IRF4 | GM12878 | 127007648 | 127007790 |
| chr9 | 127003254 | 127010000 | IRF4 | GM12878,U266 | 127007791 | 127008116 |
| chr9 | 127018604 | 127023474 | IRF4 | U266 | 127020681 | 127020821 |
| chr9 | 127018604 | 127023474 | IRF4 | U266 | 127021781 | 127021973 |
| chr9 | 126984547 | 126987975 | IRF5 | GM12878 | 126985896 | 126986190 |
| chr9 | 127018604 | 127023474 | ISL1 | SK-N-BE2-C | 127021700 | 127022037 |
| chr9 | 126984547 | 126987975 | JMJD1C | NB4,HL-60,Kasumi-1,THP-1 | 126985819 | 126986277 |
| chr9 | 126984547 | 126987975 | JUNB | K-562 | 126985064 | 126985244 |
| chr9 | 126984547 | 126987975 | JUNB | CFPAC-1 | 126985478 | 126986876 |
| chr9 | 126984547 | 126987975 | JUNB | MCF10A-Er-Src,GM12878,Karpas-299,CD4,HAEC,keratinocyte | 126985845 | 126986143 |
| chr9 | 126984547 | 126987975 | JUNB | CD4 | 126986610 | 126986956 |
| chr9 | 127003254 | 127010000 | JUNB | GM12878,K-562,CD4 | 127005224 | 127005760 |
| chr9 | 127003254 | 127010000 | JUNB | CFPAC-1 | 127005792 | 127006107 |
| chr9 | 127003254 | 127010000 | JUNB | CFPAC-1 | 127009171 | 127009682 |
| chr9 | 127018604 | 127023474 | JUNB | HAEC | 127021847 | 127022047 |
| chr9 | 126984547 | 126987975 | JUND | HeLa-S3,K-562 | 126985100 | 126985317 |
| chr9 | 126984547 | 126987975 | JUND | HeLa-S3,Kasumi-1,HCT-116,K-562 | 126985869 | 126986122 |
| chr9 | 126984547 | 126987975 | JUND | GP5D | 126986752 | 126987065 |
| chr9 | 126984547 | 126987975 | JUND | Hep-G2,K-562 | 126986760 | 126986894 |
| chr9 | 127003254 | 127010000 | JUND | GM12878 | 127005427 | 127005608 |
| chr9 | 126984547 | 126987975 | JUN | MDA-MB-231,K-562,MDA-BoM-1833 | 126985011 | 126985206 |
| chr9 | 126984547 | 126987975 | JUN | HeLa-S3 | 126985144 | 126985423 |
| chr9 | 126984547 | 126987975 | JUN | MCF-7,HAEC,MCF10A-Er-Src,Karpas-299,T-cell,K-562,786-O | 126985871 | 126986220 |
| chr9 | 127003254 | 127010000 | JUN | MCF-7,Karpas-299,T-cell | 127005254 | 127005766 |
| chr9 | 127003254 | 127010000 | JUN | Karpas-299 | 127007686 | 127007930 |
| chr9 | 127018604 | 127023474 | JUN | myometrium | 127021714 | 127021977 |
| chr9 | 126984547 | 126987975 | KLF13 | K-562 | 126985048 | 126985331 |
| chr9 | 126984547 | 126987975 | KLF1 | HUDEP-2,K-562,HEK293,erythroid | 126985849 | 126986083 |
| chr9 | 126984547 | 126987975 | KLF3 | keratinocyte | 126984979 | 126985359 |
| chr9 | 126984547 | 126987975 | KLF3 | keratinocyte | 126985664 | 126986276 |
| chr9 | 126984547 | 126987975 | KLF4 | keratinocyte | 126985878 | 126986242 |
| chr9 | 126984547 | 126987975 | KLF5 | ESO-26,KATO-III,GP5D | 126985034 | 126985304 |
| chr9 | 126984547 | 126987975 | KLF5 | ESO-26,KATO-III,GP5D,HCC95 | 126985768 | 126986180 |
| chr9 | 126984547 | 126987975 | KLF5 | ESO-26 | 126986680 | 126986972 |
| chr9 | 126984547 | 126987975 | KLF6 | K-562 | 126985077 | 126985265 |
| chr9 | 127003254 | 127010000 | KLF6 | PDAC | 127009289 | 127009666 |
| chr9 | 126984547 | 126987975 | KLF9 | GBM1A | 126985931 | 126986056 |
| chr9 | 126984547 | 126987975 | L3MBTL2 | K-562 | 126984956 | 126985259 |
| chr9 | 127018604 | 127023474 | L3MBTL2 | K-562 | 127021577 | 127022041 |
| chr9 | 126984547 | 126987975 | LDB1 | HEP,Kasumi-1 | 126985833 | 126986264 |
| chr9 | 126984547 | 126987975 | LMO1 | Jurkat | 126985822 | 126986295 |
| chr9 | 127003254 | 127010000 | LMO1 | Jurkat | 127005283 | 127005705 |
| chr9 | 126984547 | 126987975 | LMO2 | TSU-1621MT,CCRF-CEM,Kasumi-1 | 126985895 | 126986179 |
| chr9 | 127003254 | 127010000 | LMO2 | CCRF-CEM | 127004655 | 127004845 |
| chr9 | 126984547 | 126987975 | LYL1 | Kasumi-1,THP-1 | 126985866 | 126986161 |
| chr9 | 126984547 | 126987975 | MAFB | islet | 126985200 | 126985543 |
| chr9 | 126984547 | 126987975 | MAFB | islet | 126987645 | 126987868 |
| chr9 | 127018604 | 127023474 | MAFB | islet | 127021777 | 127021991 |
| chr9 | 126984547 | 126987975 | MAFF | HeLa-S3 | 126985132 | 126985325 |
| chr9 | 126984547 | 126987975 | MAFF | HeLa-S3 | 126985966 | 126986097 |
| chr9 | 127018604 | 127023474 | MAFF | K-562,HeLa-S3 | 127020167 | 127020320 |
| chr9 | 126984547 | 126987975 | MAFG | K-562 | 126985012 | 126985255 |
| chr9 | 127018604 | 127023474 | MAFG | K-562 | 127020038 | 127020445 |
| chr9 | 126984547 | 126987975 | MAF | CD4,lymphocyte | 126985789 | 126986274 |
| chr9 | 127003254 | 127010000 | MAF | CD4 | 127005202 | 127005712 |
| chr9 | 127018604 | 127023474 | MAFK | Hep-G2 | 127020181 | 127020323 |
| chr9 | 126984547 | 126987975 | MAML1 | SCC | 126985720 | 126986284 |
| chr9 | 126984547 | 126987975 | MAML1 | SCC | 126986687 | 126987130 |
| chr9 | 126984547 | 126987975 | MAX | NCI-H2171,HCT-116,HeLa-S3,MDA-MB-231,K-562 | 126985003 | 126985287 |
| chr9 | 126984547 | 126987975 | MAX | HCT-116,HeLa-S3,MDA-MB-231,K-562,SK-N-SH,P493-6 | 126985876 | 126986112 |
| chr9 | 127003254 | 127010000 | MAX | P493-6 | 127005377 | 127005586 |
| chr9 | 127018604 | 127023474 | MAX | liver,SK-N-SH,NCI-H2171,K-562 | 127021653 | 127022026 |
| chr9 | 126984547 | 126987975 | MAZ | K-562 | 126985141 | 126985275 |
| chr9 | 126984547 | 126987975 | MED12 | myometrium | 126985942 | 126986038 |
| chr9 | 127018604 | 127023474 | MED12 | leiomyoma,myometrium | 127021763 | 127021921 |
| chr9 | 127018604 | 127023474 | MED12 | myometrium | 127021865 | 127022039 |
| chr9 | 127018604 | 127023474 | MED12 | myometrium | 127023160 | 127023270 |
| chr9 | 126984547 | 126987975 | MEF2A | GM12878 | 126985884 | 126986100 |
| chr9 | 127003254 | 127010000 | MEF2A | GM12878 | 127005344 | 127005920 |
| chr9 | 127018604 | 127023474 | MEF2A | GM12878 | 127020194 | 127020329 |
| chr9 | 126984547 | 126987975 | MEF2B | GM12878,DLBCL | 126985846 | 126986184 |
| chr9 | 126999412 | 127000388 | MEF2B | GM12878 | 126999713 | 127000154 |
| chr9 | 127003254 | 127010000 | MEF2B | GM12878 | 127005059 | 127005897 |
| chr9 | 127003254 | 127010000 | MEF2B | GM12878 | 127007663 | 127008015 |
| chr9 | 127018604 | 127023474 | MEF2B | GM12878 | 127020189 | 127020436 |
| chr9 | 127003254 | 127010000 | MEF2C | GM12878 | 127005419 | 127005638 |
| chr9 | 127003254 | 127010000 | MEF2C | GM12878 | 127005734 | 127005909 |
| chr9 | 126984547 | 126987975 | MEF2D | K-562 | 126984976 | 126985334 |
| chr9 | 127018604 | 127023474 | MEF2D | retina | 127021673 | 127021983 |
| chr9 | 126984547 | 126987975 | MEIS1 | CHRF28811 | 126985839 | 126986339 |
| chr9 | 127003254 | 127010000 | MEIS1 | SEM | 127005328 | 127005579 |
| chr9 | 126984547 | 126987975 | MEIS2 | K-562 | 126985013 | 126985397 |
| chr9 | 127018604 | 127023474 | MEIS2 | K-562 | 127021735 | 127022110 |
| chr9 | 127018604 | 127023474 | MEIS2 | K-562 | 127023230 | 127023426 |
| chr9 | 126984547 | 126987975 | MITF | melanocyte | 126987468 | 126987678 |
| chr9 | 127018604 | 127023474 | MITF | 501-mel,melanocyte,K-562 | 127021700 | 127021994 |
| chr9 | 126984547 | 126987975 | MLLT1 | GM12878 | 126985760 | 126987061 |
| chr9 | 127003254 | 127010000 | MLLT1 | GM12878 | 127007277 | 127008714 |
| chr9 | 127018604 | 127023474 | MLLT1 | GM12878 | 127020375 | 127020735 |
| chr9 | 126984547 | 126987975 | MLLT3 | THP-1 | 126985842 | 126986081 |
| chr9 | 126984547 | 126987975 | MTA2 | RH4 | 126984980 | 126985350 |
| chr9 | 126984547 | 126987975 | MTA2 | RH4,GM12878,pre-B-cell | 126985800 | 126986300 |
| chr9 | 126984547 | 126987975 | MTA2 | GM12878 | 126986585 | 126986932 |
| chr9 | 126999412 | 127000388 | MTA2 | GM12878 | 126999659 | 127000036 |
| chr9 | 127003254 | 127010000 | MTA2 | RH4,GM12878 | 127005015 | 127005634 |
| chr9 | 127003254 | 127010000 | MTA2 | GM12878 | 127007579 | 127008197 |
| chr9 | 127018604 | 127023474 | MTA2 | RH4 | 127021711 | 127022059 |
| chr9 | 126984547 | 126987975 | MTA3 | K-562 | 126985072 | 126985347 |
| chr9 | 126984547 | 126987975 | MTA3 | K-562,GM12878 | 126985859 | 126986162 |
| chr9 | 127003254 | 127010000 | MTA3 | GM12878 | 127005370 | 127005599 |
| chr9 | 126984547 | 126987975 | MXI1 | HeLa-S3 | 126985045 | 126985261 |
| chr9 | 127003254 | 127010000 | MXI1 | IMR-90 | 127005453 | 127005599 |
| chr9 | 127018604 | 127023474 | MXI1 | IMR-90,SK-N-SH | 127021714 | 127021976 |
| chr9 | 126984547 | 126987975 | MYB | Jurkat,MOLT-3,Loucy,CD4,THP-1,PF-382,SEM,DU528 | 126985844 | 126986266 |
| chr9 | 126984547 | 126987975 | MYB | CD4 | 126986647 | 126986843 |
| chr9 | 127003254 | 127010000 | MYB | Jurkat,MOLT-3,CD4,GM12878,PF-382,SEM,DU528 | 127005241 | 127005684 |
| chr9 | 127018604 | 127023474 | MYBL2 | A-673 | 127021654 | 127021904 |
| chr9 | 126984547 | 126987975 | MYC | K-562,LoVo,HeLa-S3,DLD-1,LNCaP | 126985077 | 126985293 |
| chr9 | 126984547 | 126987975 | MYC | Jurkat,MM1-S,MCF-10A,GP5D,U2OS,HeLa-S3,P493-6 | 126985857 | 126986097 |
| chr9 | 126984547 | 126987975 | MYC | GP5D | 126986290 | 126986737 |
| chr9 | 127003254 | 127010000 | MYC | P493-6,Jurkat,MM1-S | 127005311 | 127005698 |
| chr9 | 127003254 | 127010000 | MYC | P493-6 | 127006367 | 127006528 |
| chr9 | 127018604 | 127023474 | MYC | MM1-S | 127019956 | 127020387 |
| chr9 | 127018604 | 127023474 | MYC | MM1-S | 127020576 | 127020862 |
| chr9 | 127018604 | 127023474 | MYC | K-562,NCI-H128,BJ,SK-N-AS,NCI-H2171,NB69,CD34 | 127021684 | 127021955 |
| chr9 | 126984547 | 126987975 | MYCN | LNCaP | 126984990 | 126985320 |
| chr9 | 126984547 | 126987975 | MYCN | SH-EP | 126985943 | 126986062 |
| chr9 | 127018604 | 127023474 | MYCN | Kelly,SK-N-BE2-C,CHP-134,NGP,BE2C,IMR-5,LA-N-5,NB-1643,COG-N-415,SHEP-21N | 127021675 | 127021980 |
| chr9 | 126984547 | 126987975 | MYNN | K-562 | 126985883 | 126986069 |
| chr9 | 126984547 | 126987975 | MYOD1 | myoblast,RH4 | 126985060 | 126985279 |
| chr9 | 126984547 | 126987975 | MYOD1 | myoblast | 126985928 | 126986077 |
| chr9 | 127003254 | 127010000 | MYOD1 | RD,myoblast,rhabdomyosarcoma,RH4 | 127005350 | 127005569 |
| chr9 | 127018604 | 127023474 | MYOD1 | RD,myoblast,rhabdomyosarcoma,RH4 | 127021745 | 127022003 |
| chr9 | 127018604 | 127023474 | MYOD1 | RD | 127022592 | 127022773 |
| chr9 | 127003254 | 127010000 | MYOG | RH4 | 127005309 | 127005536 |
| chr9 | 126984547 | 126987975 | NANOG | LNCaP | 126985110 | 126985323 |
| chr9 | 126984547 | 126987975 | NANOG | LNCaP | 126985818 | 126985992 |
| chr9 | 127003254 | 127010000 | NCOA2 | MCF-7 | 127007649 | 127007777 |
| chr9 | 126984547 | 126987975 | NCOR1 | K-562 | 126985146 | 126985382 |
| chr9 | 126984547 | 126987975 | NCOR1 | OCI-Ly1 | 126985892 | 126986120 |
| chr9 | 126984547 | 126987975 | NCOR2 | OCI-Ly1,AML | 126985888 | 126986211 |
| chr9 | 126984547 | 126987975 | NEUROD1 | K-562 | 126985163 | 126985341 |
| chr9 | 126984547 | 126987975 | NEUROD1 | K-562 | 126985778 | 126985987 |
| chr9 | 127018604 | 127023474 | NEUROD1 | D283-Med,NCI-H524,D341-Med | 127021684 | 127022020 |
| chr9 | 127003254 | 127010000 | NEUROG2 | MRC-5 | 127005300 | 127005529 |
| chr9 | 127018604 | 127023474 | NEUROG2 | MRC-5 | 127021664 | 127022095 |
| chr9 | 127003254 | 127010000 | NFATC1 | GM12878 | 127005385 | 127005625 |
| chr9 | 126984547 | 126987975 | NFATC3 | GM12878 | 126985735 | 126986314 |
| chr9 | 126984547 | 126987975 | NFATC3 | GM12878 | 126986888 | 126987220 |
| chr9 | 126999412 | 127000388 | NFATC3 | GM12878 | 126999684 | 127000152 |
| chr9 | 127003254 | 127010000 | NFATC3 | GM12878 | 127004532 | 127005882 |
| chr9 | 127003254 | 127010000 | NFATC3 | GM12878 | 127007690 | 127008183 |
| chr9 | 127003254 | 127010000 | NFATC3 | GM12878 | 127008552 | 127008872 |
| chr9 | 126984547 | 126987975 | NFE2 | ProEs,erythroid | 126985890 | 126986090 |
| chr9 | 126984547 | 126987975 | NFE2L2 | K-562 | 126985965 | 126986094 |
| chr9 | 127018604 | 127023474 | NFE2L2 | K-562 | 127021749 | 127021987 |
| chr9 | 126984547 | 126987975 | NFIA | K-562 | 126985217 | 126985362 |
| chr9 | 126984547 | 126987975 | NFIA | K-562 | 126985713 | 126986232 |
| chr9 | 126984547 | 126987975 | NFIB | MCF-7 | 126985837 | 126986108 |
| chr9 | 126984547 | 126987975 | NFIC | Hep-G2 | 126985626 | 126985982 |
| chr9 | 126984547 | 126987975 | NFIC | GM12878,K-562,Ishikawa,SK-N-SH | 126985820 | 126986133 |
| chr9 | 126999412 | 127000388 | NFIC | GM12878 | 126999781 | 127000068 |
| chr9 | 127003254 | 127010000 | NFIC | GM12878 | 127005220 | 127005944 |
| chr9 | 127018604 | 127023474 | NFIC | GM12878 | 127020014 | 127020703 |
| chr9 | 127018604 | 127023474 | NFIC | SK-N-SH | 127021703 | 127021980 |
| chr9 | 126984547 | 126987975 | NFKB1 | CD4-pos,MCF10A-Er-Src,L1236 | 126985886 | 126986150 |
| chr9 | 126984547 | 126987975 | NFKB1 | L1236 | 126986353 | 126986510 |
| chr9 | 126984547 | 126987975 | NFKB1 | MCF10A-Er-Src | 126986718 | 126986862 |
| chr9 | 127003254 | 127010000 | NFKB1 | L1236 | 127005351 | 127005606 |
| chr9 | 126984547 | 126987975 | NFKB2 | L1236 | 126985664 | 126986214 |
| chr9 | 126984547 | 126987975 | NFKB2 | L1236 | 126986319 | 126986489 |
| chr9 | 127003254 | 127010000 | NFKB2 | L1236 | 127005288 | 127005651 |
| chr9 | 126984547 | 126987975 | NKX3-1 | islet | 126985046 | 126985339 |
| chr9 | 126984547 | 126987975 | NKX3-1 | islet | 126987635 | 126987918 |
| chr9 | 127018604 | 127023474 | NKX3-1 | islet | 127021711 | 127021999 |
| chr9 | 127018604 | 127023474 | NOTCH3 | TALL-1 | 127022171 | 127022383 |
| chr9 | 126984547 | 126987975 | NR1H2 | HT29 | 126985010 | 126985290 |
| chr9 | 126984547 | 126987975 | NR1H2 | HT29 | 126985824 | 126986132 |
| chr9 | 126984547 | 126987975 | NR1H2 | HT29 | 126986673 | 126986976 |
| chr9 | 126984547 | 126987975 | NR2C1 | K-562 | 126985019 | 126985332 |
| chr9 | 126984547 | 126987975 | NR2C1 | K-562 | 126986700 | 126986944 |
| chr9 | 127003254 | 127010000 | NR2C1 | GM12878 | 127004831 | 127005312 |
| chr9 | 126984547 | 126987975 | NR2C2 | K-562 | 126985072 | 126985442 |
| chr9 | 126984547 | 126987975 | NR2C2 | K-562,HeLa-S3 | 126986584 | 126986871 |
| chr9 | 126984547 | 126987975 | NR2F1 | K-562 | 126984996 | 126985512 |
| chr9 | 126984547 | 126987975 | NR2F1 | GM12878,K-562 | 126985812 | 126986204 |
| chr9 | 126984547 | 126987975 | NR2F1 | K-562 | 126986722 | 126986958 |
| chr9 | 127003254 | 127010000 | NR2F1 | GM12878 | 127005338 | 127005610 |
| chr9 | 127003254 | 127010000 | NR2F1 | GM12878 | 127007579 | 127008103 |
| chr9 | 126984547 | 126987975 | NR2F2 | K-562,MCF-7 | 126985160 | 126985338 |
| chr9 | 127018604 | 127023474 | NR2F2 | MCF-7 | 127021189 | 127021495 |
| chr9 | 127018604 | 127023474 | NR2F2 | uterus,liver | 127021722 | 127022133 |
| chr9 | 126984547 | 126987975 | NR2F6 | K-562 | 126985110 | 126985401 |
| chr9 | 126984547 | 126987975 | NR2F6 | K-562 | 126985911 | 126986069 |
| chr9 | 126984547 | 126987975 | NR3C1 | BEAS-2B,K-562,A-549,MDA-MB-231,SUM159PT | 126985045 | 126985321 |
| chr9 | 126984547 | 126987975 | NR3C1 | NALM-6,BEAS-2B,HCC1937,THP-1,HeLa-B2,Ishikawa,U2OS,A-549,ALL,HCC70,MDA-MB-231,SUM159PT,breast | 126985802 | 126986173 |
| chr9 | 126984547 | 126987975 | NR3C1 | BEAS-2B,U2OS,A-549,MDA-MB-231,SUM159PT | 126986539 | 126986868 |
| chr9 | 127003254 | 127010000 | NR3C1 | SUM159PT,MCF-7,GM12878 | 127005369 | 127005596 |
| chr9 | 127018604 | 127023474 | NR3C1 | IMR-90 | 127021826 | 127022022 |
| chr9 | 127018604 | 127023474 | NR3C1 | SUM159PT | 127023177 | 127023384 |
| chr9 | 126984547 | 126987975 | NR4A1 | K-562 | 126984947 | 126985346 |
| chr9 | 126984547 | 126987975 | NR4A1 | K-562,Kasumi-1,MOLM-14 | 126985850 | 126986248 |
| chr9 | 126984547 | 126987975 | NRF1 | HeLa-S3,HCC1954 | 126985038 | 126985263 |
| chr9 | 126984547 | 126987975 | NRF1 | HeLa-S3 | 126985695 | 126986456 |
| chr9 | 127018604 | 127023474 | NRF1 | K-562 | 127021774 | 127022026 |
| chr9 | 127003254 | 127010000 | NRIP1 | MCF-7 | 127005390 | 127005562 |
| chr9 | 127018604 | 127023474 | OLIG2 | brain-prefrontal-cortex | 127021639 | 127022124 |
| chr9 | 126999412 | 127000388 | ONECUT1 | H9,pancreatic-progenitor | 127000004 | 127000316 |
| chr9 | 127018604 | 127023474 | OTX2 | retina | 127021606 | 127021962 |
| chr9 | 126984547 | 126987975 | PAX5 | GM12878,GM12891,NALM-6 | 126985878 | 126986171 |
| chr9 | 126999412 | 127000388 | PAX5 | GM12878 | 126999772 | 126999913 |
| chr9 | 127003254 | 127010000 | PAX5 | GM12878 | 127004996 | 127005131 |
| chr9 | 127003254 | 127010000 | PAX5 | GM12878,GM12891 | 127005309 | 127005677 |
| chr9 | 127003254 | 127010000 | PAX5 | GM12878 | 127005738 | 127005960 |
| chr9 | 127003254 | 127010000 | PAX5 | GM12878 | 127007580 | 127008090 |
| chr9 | 126984547 | 126987975 | PBX1 | RCH-ACV | 126985787 | 126986377 |
| chr9 | 126984547 | 126987975 | PBX2 | K-562 | 126984886 | 126985426 |
| chr9 | 127018604 | 127023474 | PBX2 | K-562 | 127021746 | 127022113 |
| chr9 | 127003254 | 127010000 | PBX3 | GM12878 | 127005047 | 127005146 |
| chr9 | 127003254 | 127010000 | PBX3 | GM12878 | 127005296 | 127005607 |
| chr9 | 126984547 | 126987975 | PGR | MCF-7,AB32 | 126985819 | 126986102 |
| chr9 | 126984547 | 126987975 | PGR | AB32 | 126986416 | 126986900 |
| chr9 | 127003254 | 127010000 | PGR | MCF-7,T-47D,AB32,breast | 127005269 | 127005604 |
| chr9 | 127003254 | 127010000 | PGR | T-47D | 127007599 | 127007748 |
| chr9 | 127003254 | 127010000 | PGR | T-47D | 127008176 | 127008414 |
| chr9 | 127018604 | 127023474 | PGR | myometrium | 127021702 | 127022183 |
| chr9 | 127018604 | 127023474 | PGR | myometrium | 127022413 | 127022568 |
| chr9 | 127018604 | 127023474 | PHOX2B | SK-N-BE2-C | 127021681 | 127022025 |
| chr9 | 127018604 | 127023474 | PITX3 | SH-SY5Y | 127021586 | 127022271 |
| chr9 | 126984547 | 126987975 | PKNOX1 | K-562 | 126985113 | 126985358 |
| chr9 | 126984547 | 126987975 | PKNOX1 | GM12878 | 126985864 | 126986645 |
| chr9 | 126999412 | 127000388 | PKNOX1 | GM12878 | 126999707 | 127000009 |
| chr9 | 127003254 | 127010000 | PKNOX1 | GM12878 | 127004717 | 127005724 |
| chr9 | 127003254 | 127010000 | PKNOX1 | GM12878 | 127007616 | 127008132 |
| chr9 | 127018604 | 127023474 | PKNOX1 | K-562 | 127021771 | 127022062 |
| chr9 | 127018604 | 127023474 | PLAG1 | K-562 | 127021631 | 127022200 |
| chr9 | 127003254 | 127010000 | PML | GM12878 | 127005351 | 127005594 |
| chr9 | 126984547 | 126987975 | POU2AF1 | pre-B-cell | 126985942 | 126986145 |
| chr9 | 126984547 | 126987975 | POU2F2 | pre-B-cell | 126985878 | 126986194 |
| chr9 | 127003254 | 127010000 | POU5F1 | hiPSC | 127006031 | 127006179 |
| chr9 | 127003254 | 127010000 | POU5F1 | BJ | 127007306 | 127007429 |
| chr9 | 126984547 | 126987975 | PPARG | HT29 | 126985006 | 126985216 |
| chr9 | 126984547 | 126987975 | PPARG | HT29 | 126985728 | 126986190 |
| chr9 | 126984547 | 126987975 | PPARG | OE33,HT29 | 126986612 | 126986976 |
| chr9 | 127018604 | 127023474 | PPARG | ASC,HUVEC-C | 127021724 | 127021960 |
| chr9 | 126984547 | 126987975 | PRDM10 | K-562 | 126984980 | 126985199 |
| chr9 | 126984547 | 126987975 | PRDM10 | Hep-G2 | 126986737 | 126986914 |
| chr9 | 126984547 | 126987975 | PRDM1 | HeLa-S3 | 126985075 | 126985318 |
| chr9 | 126984547 | 126987975 | PROX1 | SW480 | 126985047 | 126985225 |
| chr9 | 126984547 | 126987975 | PROX1 | SW480 | 126985899 | 126986247 |
| chr9 | 126984547 | 126987975 | PROX1 | SW480 | 126986636 | 126986886 |
| chr9 | 127003254 | 127010000 | PROX1 | SW480 | 127005464 | 127005577 |
| chr9 | 126984547 | 126987975 | PTRF | K-562 | 126984969 | 126985212 |
| chr9 | 126984547 | 126987975 | PTRF | K-562 | 126985891 | 126986324 |
| chr9 | 126984547 | 126987975 | PYGO2 | K-562 | 126985948 | 126986276 |
| chr9 | 126984547 | 126987975 | RAD51 | GM12878 | 126985862 | 126986101 |
| chr9 | 127003254 | 127010000 | RAD51 | GM12878 | 127005287 | 127005597 |
| chr9 | 127018604 | 127023474 | RAD51 | GM12878 | 127020040 | 127020300 |
| chr9 | 127018604 | 127023474 | RAD51 | K-562 | 127021636 | 127022047 |
| chr9 | 126984547 | 126987975 | RARA | TSU-1621MT | 126985904 | 126986226 |
| chr9 | 126984547 | 126987975 | RB1 | GM12878 | 126985868 | 126986085 |
| chr9 | 127003254 | 127010000 | RB1 | GM12878 | 127005168 | 127005630 |
| chr9 | 127003254 | 127010000 | RB1 | GM12878 | 127007669 | 127008169 |
| chr9 | 127018604 | 127023474 | RBBP4 | RH5 | 127021776 | 127022071 |
| chr9 | 126984547 | 126987975 | RELA | Detroit-562,SW480 | 126984994 | 126985280 |
| chr9 | 126984547 | 126987975 | RELA | GM18951,HAEC,GM12878,CD4,GM10847,GM19099,THP-1,SW480,GM15510,LNCaP,GM18505,HeLa-B2,aortic-endothelial-cell,GM18526,Detroit-562,786-O,KB,SGBS,BJAB,mammary-epithelial-cell,FaDu,786-M1A,GM12891 | 126985873 | 126986167 |
| chr9 | 126984547 | 126987975 | RELA | GM12878 | 126986288 | 126986488 |
| chr9 | 126984547 | 126987975 | RELA | SW480 | 126986707 | 126986957 |
| chr9 | 126999412 | 127000388 | RELA | GM12878 | 126999790 | 126999943 |
| chr9 | 127003254 | 127010000 | RELA | HEK293 | 127003333 | 127003638 |
| chr9 | 127003254 | 127010000 | RELA | GM19099,SW480,GM15510,GM18951,GM18505,SGBS,GM12878,GM12891,CD4 | 127005368 | 127005617 |
| chr9 | 127003254 | 127010000 | RELA | SW480 | 127009240 | 127009732 |
| chr9 | 127003254 | 127010000 | RELA | aortic-endothelial-cell | 127009341 | 127009476 |
| chr9 | 127018604 | 127023474 | RELA | SGBS | 127019054 | 127019243 |
| chr9 | 127018604 | 127023474 | RELA | IMR-90,aortic-endothelial-cell,MCF-7,SGBS | 127021797 | 127022045 |
| chr9 | 127018604 | 127023474 | RELA | SGBS | 127023176 | 127023398 |
| chr9 | 126984547 | 126987975 | RELB | GM12878,L1236 | 126985848 | 126986364 |
| chr9 | 127003254 | 127010000 | RELB | GM12878,L1236 | 127005058 | 127005802 |
| chr9 | 127003254 | 127010000 | RELB | GM12878 | 127007460 | 127008460 |
| chr9 | 127018604 | 127023474 | RELB | GM12878 | 127020148 | 127020546 |
| chr9 | 126984547 | 126987975 | REST | hippocampus,CD4 | 126985902 | 126986190 |
| chr9 | 126984547 | 126987975 | REST | colorectal-cancer | 126986327 | 126986544 |
| chr9 | 127003254 | 127010000 | REST | CD4,GM12878 | 127005396 | 127005625 |
| chr9 | 127018604 | 127023474 | REST | colorectal-cancer | 127020721 | 127020926 |
| chr9 | 127018604 | 127023474 | REST | hippocampus,PFSK1,liver,SK-N-SH | 127021709 | 127021952 |
| chr9 | 126984547 | 126987975 | RNF2 | K-562 | 126985190 | 126985322 |
| chr9 | 126984547 | 126987975 | RNF2 | ME-1,K-562,AML | 126985889 | 126986203 |
| chr9 | 127018604 | 127023474 | RNF2 | fibroblast,HMELBRAF | 127021658 | 127021994 |
| chr9 | 127018604 | 127023474 | RORB | retina | 127021602 | 127022038 |
| chr9 | 126984547 | 126987975 | RUNX1 | CCRF-CEM,CD34,epididymis,K-562,ALL-SIL,NB4,SKNO-1,Kasumi-1,U-937,BCP-ALL,SKH1,keratinocyte,HL-60,THP-1,Jurkat,AML,697,NALM-6,MV4-11,MCF-10A,ME-1 | 126985843 | 126986236 |
| chr9 | 126984547 | 126987975 | RUNX1 | Jurkat | 126986388 | 126986612 |
| chr9 | 127003254 | 127010000 | RUNX1 | CD34,Jurkat,NB4,AML,697,MV4-11 | 127005296 | 127005629 |
| chr9 | 126984547 | 126987975 | RUNX1T1 | Kasumi-1,CD34 | 126985855 | 126986273 |
| chr9 | 126984547 | 126987975 | RUNX1T1 | Kasumi-1 | 126986329 | 126986480 |
| chr9 | 126984547 | 126987975 | RUNX2 | Karpas-45,PER-117,SaOS-2 | 126985860 | 126986364 |
| chr9 | 127003254 | 127010000 | RUNX2 | Karpas-45,PER-117 | 127005330 | 127005688 |
| chr9 | 126984547 | 126987975 | RUVBL2 | U2OS | 126985980 | 126986616 |
| chr9 | 126984547 | 126987975 | RXRA | JMSU-1 | 126985882 | 126986172 |
| chr9 | 127003254 | 127010000 | RXRA | GM12878 | 127005302 | 127005550 |
| chr9 | 127003254 | 127010000 | SALL2 | HEK293 | 127007730 | 127007936 |
| chr9 | 127018604 | 127023474 | SCRT1 | HEK293 | 127020385 | 127020632 |
| chr9 | 126984547 | 126987975 | SFPQ | LTAD | 126985725 | 126985930 |
| chr9 | 126984547 | 126987975 | SIN3A | HCT-116 | 126985842 | 126986081 |
| chr9 | 127003254 | 127010000 | SIN3A | HUVEC-C,SK-N-SH | 127005360 | 127005551 |
| chr9 | 127018604 | 127023474 | SIN3A | PFSK1,SK-N-SH | 127021768 | 127021934 |
| chr9 | 127003254 | 127010000 | SIX5 | GM12878 | 127005435 | 127005545 |
| chr9 | 126984547 | 126987975 | SKI | HL-60 | 126985813 | 126986372 |
| chr9 | 126984547 | 126987975 | SKIL | GM12878 | 126985813 | 126986310 |
| chr9 | 126999412 | 127000388 | SKIL | GM12878 | 126999566 | 127000216 |
| chr9 | 127003254 | 127010000 | SKIL | GM12878 | 127004721 | 127005924 |
| chr9 | 127003254 | 127010000 | SKIL | GM12878 | 127007617 | 127008227 |
| chr9 | 126984547 | 126987975 | SMAD1 | GM12878,CD34 | 126985857 | 126986160 |
| chr9 | 127003254 | 127010000 | SMAD1 | GM12878 | 127004940 | 127005644 |
| chr9 | 126984547 | 126987975 | SMAD3 | HCC1954,NCI-H441,H69,MDA-MB-231 | 126985001 | 126985431 |
| chr9 | 126984547 | 126987975 | SMAD3 | MDA-MB-231,LX2,HMLE,H69,HCC1954,NCI-H441,PC-3 | 126985824 | 126986338 |
| chr9 | 126984547 | 126987975 | SMAD3 | HCC1954,NCI-H441 | 126986628 | 126986920 |
| chr9 | 127003254 | 127010000 | SMAD3 | BG03 | 127008001 | 127008143 |
| chr9 | 126984547 | 126987975 | SMAD4 | HGrC1 | 126986060 | 126986246 |
| chr9 | 127003254 | 127010000 | SMAD4 | endoderm | 127007691 | 127007880 |
| chr9 | 127018604 | 127023474 | SMAD4 | HGrC1 | 127020563 | 127020784 |
| chr9 | 127018604 | 127023474 | SMARCA2 | NPC | 127020521 | 127020786 |
| chr9 | 127018604 | 127023474 | SMARCA2 | NPC,SK-N-MC | 127021747 | 127022081 |
| chr9 | 126984547 | 126987975 | SMARCA4 | A-549 | 126984962 | 126985092 |
| chr9 | 126984547 | 126987975 | SMARCA4 | K-562,endometrial-epithelial-cells,A-549 | 126985012 | 126985312 |
| chr9 | 126984547 | 126987975 | SMARCA4 | A-549 | 126985039 | 126985098 |
| chr9 | 126984547 | 126987975 | SMARCA4 | A-549 | 126985295 | 126985358 |
| chr9 | 126984547 | 126987975 | SMARCA4 | HCT-116,CTV-1,K-562,BIN-67,endometrial-epithelial-cells,A-549 | 126985822 | 126986180 |
| chr9 | 126984547 | 126987975 | SMARCA4 | endometrial-epithelial-cells,J-Lat,501-mel,A-549 | 126986576 | 126986829 |
| chr9 | 127003254 | 127010000 | SMARCA4 | NSC | 127005021 | 127005169 |
| chr9 | 127003254 | 127010000 | SMARCA4 | NSC,CTV-1 | 127005360 | 127005664 |
| chr9 | 127003254 | 127010000 | SMARCA4 | NSC | 127007638 | 127007939 |
| chr9 | 127003254 | 127010000 | SMARCA4 | A-549 | 127009519 | 127009572 |
| chr9 | 127018604 | 127023474 | SMARCA4 | NPC,NGP,501-mel,NSC | 127021801 | 127022111 |
| chr9 | 126984547 | 126987975 | SMARCA5 | GM12878 | 126985676 | 126986104 |
| chr9 | 126984547 | 126987975 | SMARCA5 | GM12878 | 126986229 | 126986615 |
| chr9 | 127003254 | 127010000 | SMARCA5 | GM12878 | 127004561 | 127005527 |
| chr9 | 127003254 | 127010000 | SMARCA5 | GM12878 | 127005786 | 127006251 |
| chr9 | 127003254 | 127010000 | SMARCA5 | GM12878 | 127007598 | 127007803 |
| chr9 | 127003254 | 127010000 | SMARCB1 | MCF-7 | 127005286 | 127005558 |
| chr9 | 127018604 | 127023474 | SMARCB1 | proliferating-human-fibroblast | 127021792 | 127022227 |
| chr9 | 127018604 | 127023474 | SMARCB1 | proliferating-human-fibroblast | 127022261 | 127022543 |
| chr9 | 126984547 | 126987975 | SMARCC1 | SK-N-MC | 126985940 | 126986150 |
| chr9 | 127018604 | 127023474 | SMARCC1 | SK-N-MC | 127021785 | 127022037 |
| chr9 | 126984547 | 126987975 | SMARCE1 | K-562 | 126985064 | 126985310 |
| chr9 | 126984547 | 126987975 | SMARCE1 | K-562 | 126985821 | 126986171 |
| chr9 | 126984547 | 126987975 | SNAI2 | PC-9 | 126985171 | 126985697 |
| chr9 | 126984547 | 126987975 | SNAI2 | PC-9 | 126985721 | 126986129 |
| chr9 | 126984547 | 126987975 | SNAI2 | PC-9 | 126986146 | 126986542 |
| chr9 | 127003254 | 127010000 | SND1 | NHEK | 127005193 | 127005646 |
| chr9 | 126984547 | 126987975 | SOX2 | LK2,KNS-62,HCC95,TT | 126985816 | 126986135 |
| chr9 | 126984547 | 126987975 | SOX2 | KNS-62 | 126986828 | 126987124 |
| chr9 | 127003254 | 127010000 | SOX2 | LK2,glioma,HNSC | 127005300 | 127005621 |
| chr9 | 126984547 | 126987975 | SOX4 | MDA-MB-231 | 126985679 | 126986064 |
| chr9 | 127018604 | 127023474 | SOX4 | MRC-5 | 127021754 | 127021907 |
| chr9 | 126984547 | 126987975 | SOX6 | K-562 | 126985050 | 126985396 |
| chr9 | 126984547 | 126987975 | SOX6 | K-562 | 126985913 | 126986163 |
| chr9 | 126984547 | 126987975 | SOX9 | HT29 | 126985941 | 126986089 |
| chr9 | 126984547 | 126987975 | SP1 | A-549 | 126985027 | 126985342 |
| chr9 | 126984547 | 126987975 | SP1 | A-549,GM12878,HCT-116 | 126985871 | 126986199 |
| chr9 | 127003254 | 127010000 | SP1 | GM12878 | 127005043 | 127005651 |
| chr9 | 127003254 | 127010000 | SP1 | GM12878 | 127005869 | 127005991 |
| chr9 | 127003254 | 127010000 | SP1 | GM12878 | 127007556 | 127008025 |
| chr9 | 127018604 | 127023474 | SPDEF | MCF-7 | 127022722 | 127022983 |
| chr9 | 126984547 | 126987975 | SPI1 | primary-monocyte,macrophage,GM12891,monocyte,primary-B-cell,BDMC,U-937,EM-3,K-562,NB4,CTV-1,KG-1,Kasumi-1,DC,NCI-H929,CD34,THP-1,RS4-11 | 126985791 | 126986137 |
| chr9 | 126984547 | 126987975 | SPI1 | DC | 126986155 | 126986260 |
| chr9 | 127003254 | 127010000 | SPI1 | GM12891 | 127005024 | 127005151 |
| chr9 | 127003254 | 127010000 | SPI1 | NCI-H929,GM12891 | 127005468 | 127005624 |
| chr9 | 127003254 | 127010000 | SPI1 | GM12891,OCI-Ly7,U-937,NB4,K-562,EM-3,KG-1,Kasumi-1,monocyte,CD34,RS4-11 | 127008791 | 127008972 |
| chr9 | 126984547 | 126987975 | SPIB | OCI-Ly3 | 126985784 | 126986142 |
| chr9 | 127003254 | 127010000 | SPIB | OCI-Ly3 | 127008790 | 127009005 |
| chr9 | 126984547 | 126987975 | SREBF2 | HeLa-S3 | 126986364 | 126986819 |
| chr9 | 126984547 | 126987975 | SRF | K-562 | 126985184 | 126985325 |
| chr9 | 126984547 | 126987975 | SRF | GM12878,HCT-116 | 126985888 | 126986088 |
| chr9 | 127003254 | 127010000 | SRF | GM12878 | 127005434 | 127005530 |
| chr9 | 126984547 | 126987975 | STAT1 | NCI-H358 | 126985030 | 126985215 |
| chr9 | 126984547 | 126987975 | STAT1 | HeLa-S3,SET-2,CD14,NCI-H358,FaDu | 126985889 | 126986194 |
| chr9 | 126984547 | 126987975 | STAT3 | MDA-MB-231,breast-cancer,SUM159PT,NCI-H358,HeLa-S3,HCC70 | 126985051 | 126985362 |
| chr9 | 126984547 | 126987975 | STAT3 | HCC1187,A139,BT-474,MDA-MB-231,HCC1937,FaDu,monocyte,MCF10A-Er-Src,MCF-7,MDA-MB-468,MDA-MB-157,B-cell,MCF-10A,NCI-H358,SUM159PT,HeLa-S3,Th1,HCC70,A-137 | 126985838 | 126986198 |
| chr9 | 126984547 | 126987975 | STAT3 | MCF10A-Er-Src,MCF-10A | 126986724 | 126987007 |
| chr9 | 127003254 | 127010000 | STAT3 | HCC1187,MCF-7,SUM159PT,A-137 | 127005348 | 127005578 |
| chr9 | 127018604 | 127023474 | STAT3 | HCC1187,A-137 | 127021712 | 127022028 |
| chr9 | 127018604 | 127023474 | STAT3 | HCC70 | 127023225 | 127023448 |
| chr9 | 126984547 | 126987975 | STAT5A | MV4-11 | 126985874 | 126986178 |
| chr9 | 127003254 | 127010000 | STAT5A | GM12878 | 127005357 | 127005563 |
| chr9 | 126984547 | 126987975 | STAT5B | CD8 | 126985872 | 126986167 |
| chr9 | 127003254 | 127010000 | STAT5B | CD8 | 127005362 | 127005631 |
| chr9 | 126984547 | 126987975 | SUPT5H | HeLa | 126984975 | 126985154 |
| chr9 | 126984547 | 126987975 | SUPT5H | DLD-1,HeLa | 126985982 | 126986288 |
| chr9 | 126984547 | 126987975 | SUPT6H | HCT-116 | 126985880 | 126986222 |
| chr9 | 126984547 | 126987975 | SUPT6H | HCT-116 | 126986466 | 126986714 |
| chr9 | 126984547 | 126987975 | TAF1 | HeLa-S3 | 126986011 | 126986188 |
| chr9 | 127003254 | 127010000 | TAF1 | GM12878 | 127005360 | 127005674 |
| chr9 | 127018604 | 127023474 | TAF1 | SK-N-SH | 127021677 | 127021922 |
| chr9 | 126984547 | 126987975 | TAL1 | K-562 | 126985165 | 126985333 |
| chr9 | 126984547 | 126987975 | TAL1 | RPMI8402,K-562,TSU-1621MT,CHRF28811,MOLT-3 | 126985887 | 126986183 |
| chr9 | 127003254 | 127010000 | TAL1 | Jurkat,CCRF-CEM,PRIMA2,PRIMA5,MOLT-3 | 127005352 | 127005589 |
| chr9 | 126984547 | 126987975 | TARDBP | GM12878 | 126985671 | 126986483 |
| chr9 | 126999412 | 127000388 | TARDBP | GM12878 | 127000030 | 127000368 |
| chr9 | 127003254 | 127010000 | TARDBP | GM12878 | 127003802 | 127004162 |
| chr9 | 127003254 | 127010000 | TARDBP | GM12878 | 127005372 | 127005582 |
| chr9 | 127003254 | 127010000 | TARDBP | GM12878 | 127007455 | 127008275 |
| chr9 | 127018604 | 127023474 | TARDBP | GM12878 | 127020211 | 127020559 |
| chr9 | 126984547 | 126987975 | TBP | HeLa-S3 | 126985062 | 126985310 |
| chr9 | 127003254 | 127010000 | TBP | GM12878 | 127005313 | 127005454 |
| chr9 | 126984547 | 126987975 | TBX21 | Th1,GM12878,CD4 | 126985795 | 126986273 |
| chr9 | 126984547 | 126987975 | TBX21 | Th1 | 126986672 | 126986869 |
| chr9 | 127003254 | 127010000 | TBX21 | Th1 | 127005342 | 127005636 |
| chr9 | 127003254 | 127010000 | TBX21 | GM12878 | 127007175 | 127008308 |
| chr9 | 127018604 | 127023474 | TBX21 | GM12878 | 127020117 | 127020988 |
| chr9 | 127018604 | 127023474 | TBX2 | Kelly | 127021746 | 127021887 |
| chr9 | 127018604 | 127023474 | TBX5 | hiPSC | 127021784 | 127022051 |
| chr9 | 126984547 | 126987975 | TCF12 | A-549 | 126985035 | 126985312 |
| chr9 | 126984547 | 126987975 | TCF12 | RPMI8402,ME-1,A-549,GM12878,Kasumi-1 | 126985914 | 126986186 |
| chr9 | 127003254 | 127010000 | TCF12 | Jurkat,GM12878 | 127005133 | 127005618 |
| chr9 | 127003254 | 127010000 | TCF12 | GM12878 | 127006118 | 127006213 |
| chr9 | 127003254 | 127010000 | TCF12 | GM12878 | 127007626 | 127007753 |
| chr9 | 127003254 | 127010000 | TCF12 | GM12878 | 127007936 | 127008167 |
| chr9 | 127018604 | 127023474 | TCF21 | HCASMC | 127021673 | 127022099 |
| chr9 | 126984547 | 126987975 | TCF3 | K-562 | 126985093 | 126985320 |
| chr9 | 126984547 | 126987975 | TCF3 | RCH-ACV,K-562,697,Kasumi-1 | 126985782 | 126986373 |
| chr9 | 127003254 | 127010000 | TCF3 | GM12878 | 127005018 | 127005183 |
| chr9 | 127003254 | 127010000 | TCF3 | GM12878,Kasumi-1 | 127005282 | 127005610 |
| chr9 | 126984547 | 126987975 | TCF4 | GEN2-2,CAL-1 | 126985848 | 126986339 |
| chr9 | 127003254 | 127010000 | TCF4 | GEN2-2,CAL-1 | 127005312 | 127005617 |
| chr9 | 127018604 | 127023474 | TCF4 | SH-SY5Y | 127021764 | 127022011 |
| chr9 | 126984547 | 126987975 | TCF7 | GM12878,K-562 | 126985928 | 126986130 |
| chr9 | 127003254 | 127010000 | TCF7 | GM12878 | 127005359 | 127005623 |
| chr9 | 126984547 | 126987975 | TCF7L2 | LNCaP | 126985005 | 126985257 |
| chr9 | 126984547 | 126987975 | TCF7L2 | HCT-116,CD34,LNCaP,HeLa-S3 | 126985849 | 126986219 |
| chr9 | 126984547 | 126987975 | TEAD1 | keratinocyte,MSTO,H69,HUCCT1,K-562,adipocyte | 126984972 | 126985272 |
| chr9 | 126984547 | 126987975 | TEAD1 | MSTO,adipocyte,HUCCT1,keratinocyte | 126985756 | 126986155 |
| chr9 | 127018604 | 127023474 | TEAD1 | adipocyte | 127018944 | 127019208 |
| chr9 | 127018604 | 127023474 | TEAD1 | adipocyte | 127021596 | 127022145 |
| chr9 | 126984547 | 126987975 | TEAD2 | K-562 | 126984988 | 126985229 |
| chr9 | 126984547 | 126987975 | TEAD4 | HUCCT1,MDA-MB-231,PC-9,SK-MEL-147,HCT-116 | 126984943 | 126985310 |
| chr9 | 126984547 | 126987975 | TEAD4 | MDA-MB-231,PC-9,Ishikawa,SK-MEL-147,HCT-116 | 126985783 | 126986150 |
| chr9 | 126984547 | 126987975 | TEAD4 | SK-MEL-147 | 126986405 | 126986552 |
| chr9 | 127003254 | 127010000 | TEAD4 | T-47D | 127005177 | 127005445 |
| chr9 | 126984547 | 126987975 | TFAP4 | DLD-1 | 126984947 | 126985374 |
| chr9 | 126984547 | 126987975 | TFAP4 | Kasumi-1 | 126985908 | 126986145 |
| chr9 | 126984547 | 126987975 | TLE3 | LNCaP | 126985204 | 126985390 |
| chr9 | 126984547 | 126987975 | TLE3 | LNCaP | 126985338 | 126985511 |
| chr9 | 126984547 | 126987975 | TLE3 | LNCaP | 126985873 | 126986116 |
| chr9 | 126984547 | 126987975 | TP53 | SW480,MDA-MB-231 | 126985008 | 126985371 |
| chr9 | 126984547 | 126987975 | TP53 | U2OS,lymphocyte,SW480,MDA-MB-231,SaOS-2 | 126985894 | 126986182 |
| chr9 | 126984547 | 126987975 | TP53 | SW480 | 126986372 | 126986602 |
| chr9 | 126984547 | 126987975 | TP53 | MCF-10A,lymphocyte,SW480,MDA-MB-231,keratinocyte | 126986794 | 126986982 |
| chr9 | 127003254 | 127010000 | TP53 | SW480,lymphocyte | 127005384 | 127005595 |
| chr9 | 127003254 | 127010000 | TP53 | SW480 | 127009255 | 127009680 |
| chr9 | 126984547 | 126987975 | TP73 | SaOS-2 | 126985935 | 126986191 |
| chr9 | 126984547 | 126987975 | TRIM22 | GM12878 | 126985834 | 126986445 |
| chr9 | 126999412 | 127000388 | TRIM22 | GM12878 | 126999631 | 127000245 |
| chr9 | 127003254 | 127010000 | TRIM22 | GM12878 | 127003515 | 127004226 |
| chr9 | 127003254 | 127010000 | TRIM22 | GM12878 | 127004986 | 127005700 |
| chr9 | 127003254 | 127010000 | TRIM22 | GM12878 | 127007491 | 127008350 |
| chr9 | 127018604 | 127023474 | TRIM22 | GM12878 | 127020634 | 127020965 |
| chr9 | 126984547 | 126987975 | TRIM24 | MOLM-13 | 126985781 | 126986215 |
| chr9 | 126984547 | 126987975 | TRPS1 | MCF-7 | 126985010 | 126985393 |
| chr9 | 127018604 | 127023474 | TSHZ2 | SK-N-SH | 127021735 | 127022353 |
| chr9 | 127018604 | 127023474 | TWIST1 | BE2C,SK-N-BE2-C,SHEP-21N | 127021606 | 127022141 |
| chr9 | 127018604 | 127023474 | USF1 | SK-N-SH,WA01,K-562,Hep-G2 | 127021717 | 127021961 |
| chr9 | 126984547 | 126987975 | USF2 | HeLa-S3 | 126985030 | 126985312 |
| chr9 | 126984547 | 126987975 | USF2 | HeLa-S3 | 126985904 | 126986049 |
| chr9 | 127018604 | 127023474 | USF2 | SK-N-SH,K-562,IMR-90 | 127021692 | 127021992 |
| chr9 | 126984547 | 126987975 | VDR | THP-1,LCLGM10861,LX2 | 126985917 | 126986093 |
| chr9 | 126984547 | 126987975 | XBP1 | LNCaP | 126985158 | 126985460 |
| chr9 | 126984547 | 126987975 | YY1 | RH4,HCT-116 | 126985033 | 126985229 |
| chr9 | 126984547 | 126987975 | YY1 | RH4,Ishikawa,HCT-116,ALL,GM12891 | 126985865 | 126986192 |
| chr9 | 127003254 | 127010000 | YY1 | K-562,RH4,GM12891 | 127005441 | 127005607 |
| chr9 | 126984547 | 126987975 | ZBTB16 | KG-1 | 126985799 | 126986113 |
| chr9 | 126984547 | 126987975 | ZBTB1 | Jurkat | 126985807 | 126986474 |
| chr9 | 127003254 | 127010000 | ZBTB1 | Jurkat | 127004099 | 127004265 |
| chr9 | 126984547 | 126987975 | ZBTB2 | GM12878 | 126985905 | 126986194 |
| chr9 | 127003254 | 127010000 | ZBTB2 | GM12878 | 127005234 | 127005328 |
| chr9 | 126984547 | 126987975 | ZBTB33 | HCT-116,SK-N-SH,GM12878,MCF-7 | 126985862 | 126986085 |
| chr9 | 127003254 | 127010000 | ZBTB33 | GM12878 | 127004057 | 127004281 |
| chr9 | 127003254 | 127010000 | ZBTB33 | GM12878 | 127007669 | 127007975 |
| chr9 | 127018604 | 127023474 | ZBTB33 | GM12878 | 127021692 | 127021920 |
| chr9 | 126999412 | 127000388 | ZBTB40 | GM12878 | 126999532 | 127000001 |
| chr9 | 127003254 | 127010000 | ZBTB40 | GM12878 | 127004357 | 127005343 |
| chr9 | 126984547 | 126987975 | ZBTB7A | HUDEP-2 | 126985881 | 126986177 |
| chr9 | 127018604 | 127023474 | ZBTB7A | VCaP | 127021755 | 127021981 |
| chr9 | 127018604 | 127023474 | ZBTB7A | VCaP | 127022424 | 127022680 |
| chr9 | 127003254 | 127010000 | ZFP36 | K-562 | 127003868 | 127003986 |
| chr9 | 127003254 | 127010000 | ZFP36 | GM12878 | 127005369 | 127005721 |
| chr9 | 127003254 | 127010000 | ZFP36 | GM12878 | 127005774 | 127005972 |
| chr9 | 127018604 | 127023474 | ZFX | K-562 | 127021659 | 127021841 |
| chr9 | 127018604 | 127023474 | ZFX | MCF-7 | 127022429 | 127022805 |
| chr9 | 126984547 | 126987975 | ZHX1 | HeLa-S3 | 126985857 | 126986207 |
| chr9 | 127018604 | 127023474 | ZIM3 | HEK293 | 127019014 | 127019156 |
| chr9 | 126984547 | 126987975 | ZKSCAN1 | K-562 | 126985874 | 126986148 |
| chr9 | 126984547 | 126987975 | ZNF134 | K-562 | 126985826 | 126986055 |
| chr9 | 127003254 | 127010000 | ZNF143 | GM12878 | 127005348 | 127005583 |
| chr9 | 127003254 | 127010000 | ZNF143 | FLP143HA | 127007617 | 127007766 |
| chr9 | 127018604 | 127023474 | ZNF143 | FLP76 | 127022538 | 127022685 |
| chr9 | 127018604 | 127023474 | ZNF143 | MCF-7 | 127023149 | 127023324 |
| chr9 | 126984547 | 126987975 | ZNF175 | Hep-G2 | 126986751 | 126986880 |
| chr9 | 127003254 | 127010000 | ZNF18 | GM12878 | 127005310 | 127005630 |
| chr9 | 126984547 | 126987975 | ZNF207 | GM12878 | 126985734 | 126986855 |
| chr9 | 127003254 | 127010000 | ZNF207 | GM12878 | 127005248 | 127005873 |
| chr9 | 127003254 | 127010000 | ZNF207 | GM12878 | 127007740 | 127008017 |
| chr9 | 126984547 | 126987975 | ZNF217 | GM12878 | 126985806 | 126986121 |
| chr9 | 126999412 | 127000388 | ZNF217 | GM12878 | 126999417 | 126999961 |
| chr9 | 127003254 | 127010000 | ZNF217 | GM12878 | 127005163 | 127005430 |
| chr9 | 126984547 | 126987975 | ZNF239 | K-562 | 126985049 | 126985355 |
| chr9 | 127003254 | 127010000 | ZNF24 | GM12878 | 127005405 | 127005562 |
| chr9 | 127003254 | 127010000 | ZNF257 | HEK293T | 127007537 | 127007850 |
| chr9 | 127003254 | 127010000 | ZNF317 | HEK293 | 127003487 | 127003667 |
| chr9 | 126984547 | 126987975 | ZNF341 | HIES | 126985902 | 126986184 |
| chr9 | 127003254 | 127010000 | ZNF384 | K-562,GM12878 | 127005440 | 127005674 |
| chr9 | 127018604 | 127023474 | ZNF384 | K-562 | 127021669 | 127021773 |
| chr9 | 127018604 | 127023474 | ZNF513 | HEK293 | 127022927 | 127023297 |
| chr9 | 126984547 | 126987975 | ZNF592 | K-562 | 126985023 | 126985379 |
| chr9 | 126999412 | 127000388 | ZNF592 | GM12878 | 126999489 | 126999789 |
| chr9 | 127003254 | 127010000 | ZNF592 | GM12878 | 127004991 | 127005556 |
| chr9 | 126984547 | 126987975 | ZNF597 | GM12878 | 126985887 | 126986102 |
| chr9 | 127003254 | 127010000 | ZNF597 | GM12878 | 127005378 | 127005549 |
| chr9 | 126984547 | 126987975 | ZNF639 | K-562 | 126985040 | 126985299 |
| chr9 | 127018604 | 127023474 | ZNF92 | retina | 127020739 | 127020962 |
| chr9 | 127018604 | 127023474 | ZSCAN4 | HEK293 | 127020638 | 127020948 |